AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0007520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0007520 MtrunA17_Chr1g0148321 95.750 1106 23 2 1 1105 1 1083 0.0 2187
Msa0007520 MtrunA17_Chr3g0138791 74.503 1106 258 2 1 1105 1 1083 0.0 1655
Msa0007520 MtrunA17_Chr3g0123951 29.825 342 188 10 108 408 24 354 7.63e-34 134
Msa0007520 MtrunA17_Chr8g0382161 29.524 315 174 7 108 382 24 330 2.30e-32 130
Msa0007520 MtrunA17_Chr3g0119031 29.143 350 211 10 107 447 199 520 1.30e-29 127
Msa0007520 MtrunA17_Chr5g0439971 28.857 350 212 10 107 447 204 525 2.84e-29 126
Msa0007520 MtrunA17_Chr6g0458441 29.900 301 168 10 106 383 126 406 4.32e-29 124
Msa0007520 MtrunA17_Chr1g0170261 30.769 286 182 8 107 383 201 479 1.54e-28 124
Msa0007520 MtrunA17_Chr6g0458421 29.293 297 179 10 106 385 28 310 1.35e-27 119
Msa0007520 MtrunA17_Chr5g0411271 29.630 297 173 11 107 385 154 432 3.73e-27 119
Msa0007520 MtrunA17_Chr4g0074041 28.972 321 202 10 83 386 68 379 3.42e-26 116
Msa0007520 MtrunA17_Chr1g0150541 28.041 296 187 9 106 383 180 467 1.67e-25 114
Msa0007520 MtrunA17_Chr3g0133061 28.525 305 173 11 106 383 583 869 7.71e-25 112
Msa0007520 MtrunA17_Chr6g0458431 26.076 395 234 14 106 472 93 457 1.49e-24 110
Msa0007520 MtrunA17_Chr5g0427301 28.852 305 171 12 106 383 541 826 3.47e-23 107
Msa0007520 MtrunA17_Chr2g0313171 27.907 301 179 11 106 382 463 749 1.07e-22 105
Msa0007520 MtrunA17_Chr2g0312901 27.632 304 191 10 100 383 15 309 1.34e-22 104
Msa0007520 MtrunA17_Chr8g0366721 25.939 293 180 10 107 385 212 481 4.30e-21 99.0
Msa0007520 MtrunA17_Chr5g0412381 27.703 296 183 11 106 382 423 706 3.59e-20 97.1
Msa0007520 MtrunA17_Chr1g0149991 23.919 347 198 11 108 400 182 516 1.25e-16 84.7
Msa0007520 MtrunA17_Chr4g0064671 27.742 155 88 4 252 385 77 228 2.15e-12 68.6
Msa0007520 MtrunA17_Chr7g0255591 31.298 131 85 4 255 383 754 881 1.59e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0007520 AT3G49600.2 57.581 1108 424 11 1 1104 1 1066 0.0 1197
Msa0007520 AT3G49600.1 57.581 1108 424 11 1 1104 1 1066 0.0 1197
Msa0007520 AT3G49600.3 56.408 1108 416 12 1 1104 1 1045 0.0 1162
Msa0007520 AT2G22310.1 29.712 313 175 8 108 382 24 329 1.30e-31 128
Msa0007520 AT4G39910.1 28.616 318 177 9 108 382 24 334 2.70e-30 124
Msa0007520 AT3G11910.4 29.429 350 210 10 107 447 197 518 3.26e-30 130
Msa0007520 AT3G11910.2 29.429 350 210 10 107 447 197 518 3.26e-30 130
Msa0007520 AT3G11910.3 29.429 350 210 10 107 447 198 519 3.52e-30 130
Msa0007520 AT3G11910.1 29.429 350 210 10 107 447 198 519 3.52e-30 130
Msa0007520 AT5G06600.1 29.429 350 211 10 107 447 199 521 5.99e-30 129
Msa0007520 AT5G06600.2 29.429 350 211 10 107 447 198 520 6.08e-30 129
Msa0007520 AT5G06600.3 29.429 350 211 10 107 447 199 521 6.36e-30 129
Msa0007520 AT5G57990.1 28.135 327 209 10 85 394 85 402 2.32e-28 123
Msa0007520 AT2G22310.3 28.571 301 170 8 120 382 4 297 1.51e-25 109
Msa0007520 AT4G31670.1 29.167 312 189 11 86 379 153 450 3.86e-25 112
Msa0007520 AT1G17110.3 29.010 293 182 9 105 379 436 720 7.33e-25 112
Msa0007520 AT1G17110.1 29.010 293 182 9 105 379 436 720 7.33e-25 112
Msa0007520 AT1G17110.2 29.010 293 182 9 105 379 440 724 7.50e-25 112
Msa0007520 AT2G22310.2 28.041 296 168 8 125 382 4 292 1.14e-23 103
Msa0007520 AT5G65450.2 29.293 297 178 11 106 382 347 631 1.49e-23 107
Msa0007520 AT5G65450.1 29.293 297 178 11 106 382 328 612 1.68e-23 107
Msa0007520 AT3G14400.1 27.723 303 184 9 106 383 23 315 4.99e-23 105
Msa0007520 AT2G24640.2 28.428 299 182 12 105 382 2 289 5.27e-23 104
Msa0007520 AT2G24640.1 28.428 299 182 12 105 382 172 459 1.01e-22 105
Msa0007520 AT4G24560.1 26.599 297 189 10 106 383 541 827 8.91e-21 99.4
Msa0007520 AT5G46740.1 27.090 299 190 9 107 386 163 452 3.59e-18 90.5
Msa0007520 AT4G17895.1 26.689 296 187 8 107 385 176 458 4.53e-18 90.1
Msa0007520 AT5G46740.2 29.245 212 134 6 183 386 40 243 6.68e-16 82.8
Msa0007520 AT2G40930.1 32.117 137 80 4 255 385 769 898 4.07e-12 71.2
Msa0007520 AT2G40930.2 32.117 137 80 4 255 385 769 898 4.07e-12 71.2
Msa0007520 AT4G10590.4 30.282 142 95 3 255 395 748 886 1.15e-11 69.7
Msa0007520 AT4G10590.3 30.282 142 95 3 255 395 748 886 1.15e-11 69.7
Msa0007520 AT4G10590.1 30.282 142 95 3 255 395 748 886 1.15e-11 69.7
Msa0007520 AT4G10590.2 30.282 142 95 3 255 395 748 886 1.15e-11 69.7
Msa0007520 AT4G10570.1 31.818 132 86 3 255 385 749 877 1.52e-11 69.3

Find 248 sgRNAs with CRISPR-Local

Find 661 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTCTTGCCTTGGAAATTT+TGG 0.078415 1_1:+10789599 None:intergenic
CTCATAGAAGTCTTCCATTT+TGG 0.162396 1_1:+10788713 None:intergenic
GCCCTAGTAATGGCAAATTT+TGG 0.167402 1_1:-10781202 Msa0007520:three_prime_UTR
ATCACCACATTTAATGTTTC+AGG 0.169289 1_1:+10784574 None:intergenic
TCATTATCTTGTGCAGTAAT+TGG 0.193512 1_1:+10787321 None:intergenic
CTCACTGTTGAAGAGCTTAA+TGG 0.199425 1_1:-10788636 Msa0007520:CDS
CTTCCTCTTGGATTTCAAAA+TGG 0.232071 1_1:-10784636 Msa0007520:CDS
ACCAGCTGAAAATGATGATA+TGG 0.234152 1_1:-10782523 Msa0007520:CDS
ATACCTAGTGTTGGATGTTT+TGG 0.236867 1_1:-10781232 Msa0007520:three_prime_UTR
ACAGTTGCATTTAAGTAAAA+AGG 0.242000 1_1:-10789739 Msa0007520:CDS
CATGAAGCTTCTTCTGAAAA+TGG 0.265957 1_1:+10787576 None:intergenic
CTCTGAAGCTTCTTCCAAAA+TGG 0.266543 1_1:-10788727 Msa0007520:CDS
GCTCCATCTGAAGCTGATTC+TGG 0.267792 1_1:-10785057 Msa0007520:CDS
TGTTTCTTCAGAAAGGAATA+AGG 0.296369 1_1:-10786010 Msa0007520:CDS
TGTTTGGACTGTCTGATTGA+TGG 0.310376 1_1:-10786185 Msa0007520:CDS
TGATGATATGGGAATCCTTT+GGG 0.320727 1_1:-10782511 Msa0007520:CDS
AGTTCAGCGGGGAATGAAAA+TGG 0.325298 1_1:+10787780 None:intergenic
GACGAACGAATGAATGAGTT+TGG 0.330367 1_1:+10791288 None:intergenic
TGAGCTGTGTAACGAGAAAA+AGG 0.337284 1_1:-10781448 Msa0007520:CDS
GGTTGCTCCAGTGGTTTAAC+AGG 0.343117 1_1:+10787150 None:intergenic
GAAGCCTCCAAGATTGATCT+AGG 0.343119 1_1:+10782647 None:intergenic
CAATCTTTGCAGATACTCCT+TGG 0.344327 1_1:+10784118 None:intergenic
AACAATTGAATGAGAAGAAA+TGG 0.348131 1_1:-10781295 Msa0007520:three_prime_UTR
ATGGGATAAGTTACTGTCTA+AGG 0.355200 1_1:-10786804 Msa0007520:intron
ACTGCATTCAGAGCACTCTT+TGG 0.357896 1_1:+10784873 None:intergenic
GATTCACGAAGTTCCGTGTT+TGG 0.359470 1_1:+10789927 None:intergenic
ATTACAAAGCCAGTCTGTTC+AGG 0.361510 1_1:-10790074 Msa0007520:CDS
CCTCAATATTTCTGAAGTTC+CGG 0.364596 1_1:+10790233 None:intergenic
ATTTCTTAGTTCCTTCCTCT+TGG 0.365604 1_1:-10784648 Msa0007520:CDS
GACTTCAAATGTTTCATCTC+AGG 0.367963 1_1:-10781385 Msa0007520:CDS
CCATCATATCTGAGAATGAT+TGG 0.370225 1_1:-10784176 Msa0007520:CDS
CCTTATCCCAGTTGGCCAAC+TGG 0.370897 1_1:+10784031 None:intergenic
TTGAACTATCGTTCTTGCCT+TGG 0.374035 1_1:+10789590 None:intergenic
GTCGAGGTAACCTTTGACAC+TGG 0.381143 1_1:+10786848 None:intergenic
GTTTGGACTGTCTGATTGAT+GGG 0.382003 1_1:-10786184 Msa0007520:CDS
TTCCAAAATTTGCCATTACT+AGG 0.382996 1_1:+10781200 None:intergenic
GTTTCTTCAGAAAGGAATAA+GGG 0.383733 1_1:-10786009 Msa0007520:CDS
TTCTCACGAGGACTGCTGTT+TGG 0.384368 1_1:-10786201 Msa0007520:CDS
TGAAAGTTGCATTGGAGAAA+AGG 0.384973 1_1:-10782747 Msa0007520:CDS
CCAAGTGGAACGCGGAAGTC+TGG 0.385243 1_1:-10789996 Msa0007520:CDS
TGTATGTATATATATACTTC+AGG 0.389422 1_1:-10781325 Msa0007520:three_prime_UTR
CTTGCACGGGATATTCTTGA+TGG 0.392912 1_1:-10786104 Msa0007520:CDS
GAAAATCAGATACTACAAAA+AGG 0.393670 1_1:-10781669 Msa0007520:CDS
AATCTTTGCAGATACTCCTT+GGG 0.394072 1_1:+10784119 None:intergenic
TCGTCTTTCCTTCTTCTCTC+TGG 0.395110 1_1:-10791240 Msa0007520:intron
TCGTGTCAGCAGACACTTAT+CGG 0.397648 1_1:-10786151 Msa0007520:CDS
CAGTTGGCCAACTGGGATAA+GGG 0.403224 1_1:-10784030 Msa0007520:CDS
GTGAGGACCAGTTGGCCAAC+TGG 0.404484 1_1:-10784038 Msa0007520:CDS
GTGTCAGAATTCTTCACAGC+TGG 0.405629 1_1:+10784598 None:intergenic
CCAATCATTCTCAGATATGA+TGG 0.406599 1_1:+10784176 None:intergenic
CCCGCAGGACTCACAAATCT+TGG 0.406645 1_1:-10789894 Msa0007520:CDS
CCAGTTGGCCAACTGGGATA+AGG 0.409175 1_1:-10784031 Msa0007520:CDS
CTTTCCTATGGTTGTACTGC+TGG 0.413935 1_1:+10787235 None:intergenic
ATGATGATATGGGAATCCTT+TGG 0.419564 1_1:-10782512 Msa0007520:CDS
TAGTGACTGGCTTCGTCAAT+GGG 0.420428 1_1:-10787112 Msa0007520:CDS
GGAAATGTTTCTGCGAAGAA+TGG 0.422571 1_1:-10784155 Msa0007520:CDS
ACAACCGGTGTTAGATCAAT+TGG 0.422700 1_1:-10789775 Msa0007520:CDS
TGATGAGCTTGTTACTAACT+TGG 0.424756 1_1:-10787607 Msa0007520:CDS
GATTGAGAAAATTAATGATT+CGG 0.430266 1_1:-10784100 Msa0007520:CDS
AGCTGAAAATTAAGCACATC+AGG 0.432949 1_1:+10788540 None:intergenic
TAAATCTGTTAAGAATGATC+TGG 0.436916 1_1:-10787544 Msa0007520:CDS
GTGGACGTTAACATATTTGC+TGG 0.436987 1_1:-10781606 Msa0007520:CDS
ATAGTGACTGGCTTCGTCAA+TGG 0.442998 1_1:-10787113 Msa0007520:CDS
GACTTCCGCGTTCCACTTGG+AGG 0.443325 1_1:+10789999 None:intergenic
TCCGAATTGCTTCTGTGCAT+TGG 0.444163 1_1:-10790027 Msa0007520:CDS
TCGTTTCTGTTTCTTCAGAA+AGG 0.445401 1_1:-10786017 Msa0007520:CDS
AAAATTTGGTATGCTTAAGA+TGG 0.445793 1_1:+10787400 None:intergenic
TGTAGGAAAATATACAAAAC+AGG 0.446519 1_1:-10790134 Msa0007520:intron
ACCAATGCACAGAAGCAATT+CGG 0.447609 1_1:+10790026 None:intergenic
ATCAATCTTGGAGGCTTCAA+AGG 0.447974 1_1:-10782642 Msa0007520:CDS
CATGAAAATCGAGATATTGC+TGG 0.451054 1_1:-10781552 Msa0007520:intron
TTGGAGTCTAAATGAAATGT+AGG 0.454424 1_1:+10784892 None:intergenic
GATAAGGGGAATAATGAAAG+TGG 0.455432 1_1:-10784015 Msa0007520:CDS
GGAGGTCCCTAGATCAATCT+TGG 0.456160 1_1:-10782654 Msa0007520:CDS
GTCATGAGAAGTTGTTCAAT+GGG 0.460741 1_1:-10784702 Msa0007520:CDS
AATGAGCAGATCAACGGCTC+GGG 0.465077 1_1:-10790292 Msa0007520:CDS
TTAGCACCAGTTGCTTGCTC+AGG 0.468543 1_1:+10784994 None:intergenic
AATTACACATATATCCTCAT+TGG 0.468861 1_1:+10782691 None:intergenic
ACCATGTAAATCCTTGTGCC+TGG 0.470791 1_1:-10781258 Msa0007520:three_prime_UTR
TCCAAAATTTGCCATTACTA+GGG 0.471190 1_1:+10781201 None:intergenic
CTTATGCCTGAGCAAGCAAC+TGG 0.475627 1_1:-10785000 Msa0007520:CDS
TTGAATGAGAAGAAATGGTT+TGG 0.476781 1_1:-10781290 Msa0007520:three_prime_UTR
CCAGCTGAAAATGATGATAT+GGG 0.477880 1_1:-10782522 Msa0007520:CDS
CCAGACTTCCGCGTTCCACT+TGG 0.478055 1_1:+10789996 None:intergenic
GTTTATTCATATACAAGCAT+TGG 0.479324 1_1:+10789844 None:intergenic
CAGGTTTGTGAAAGTTGCAT+TGG 0.480717 1_1:-10782755 Msa0007520:CDS
ATGTGAACACGGGGCAATGG+TGG 0.482435 1_1:-10787638 Msa0007520:CDS
AGTCATGAGAAGTTGTTCAA+TGG 0.482782 1_1:-10784703 Msa0007520:CDS
GCAAGCAACTGGTGCTAAGC+GGG 0.487367 1_1:-10784989 Msa0007520:CDS
TGGTCTTGTTGCCCTAGTAA+TGG 0.487747 1_1:-10781212 Msa0007520:three_prime_UTR
ATTATTCCCCTTATCCCAGT+TGG 0.488176 1_1:+10784023 None:intergenic
CGACATTACCAGAGAGAAGA+AGG 0.490403 1_1:+10791232 None:intergenic
CCATGTAAATCCTTGTGCCT+GGG 0.492793 1_1:-10781257 Msa0007520:three_prime_UTR
CCACGTCTGAGAATCAGTTC+AGG 0.492988 1_1:+10784348 None:intergenic
ACTGTCTGATTGATGGGGCT+CGG 0.493794 1_1:-10786178 Msa0007520:CDS
ATCATTTAAGCAACTTGCAC+GGG 0.495522 1_1:-10786117 Msa0007520:CDS
TCAATTCTACCTCTTTCCTA+TGG 0.497661 1_1:+10787223 None:intergenic
GAAATGTTTCTGCGAAGAAT+GGG 0.500530 1_1:-10784154 Msa0007520:CDS
GGCAATATGTGAGGACCAGT+TGG 0.509210 1_1:-10784046 Msa0007520:CDS
GGACTTTACCGTGTGAACAT+TGG 0.509591 1_1:+10786870 None:intergenic
TGTCAGAATTCTTCACAGCT+GGG 0.511169 1_1:+10784599 None:intergenic
TCAATCTTGGAGGCTTCAAA+GGG 0.512924 1_1:-10782641 Msa0007520:CDS
CCCAGGCACAAGGATTTACA+TGG 0.514041 1_1:+10781257 None:intergenic
AATGGAAGACTTCTATGAGT+TGG 0.518411 1_1:-10788709 Msa0007520:CDS
TAAGCGGGTGCTTGTTCCCG+AGG 0.518885 1_1:-10784974 Msa0007520:CDS
AGCGACTGTCTTCTAAAGCA+TGG 0.519590 1_1:-10786823 Msa0007520:CDS
ATTCTAATTTCTCTGAAGCA+AGG 0.526792 1_1:-10787518 Msa0007520:CDS
TGGTGCACTGCTCTGTGAAA+AGG 0.526975 1_1:-10784551 Msa0007520:intron
ACTAGATGAAAATGTCTCCA+TGG 0.527335 1_1:+10787443 None:intergenic
CGTGTCAGCAGACACTTATC+GGG 0.527748 1_1:-10786150 Msa0007520:CDS
AATGAGAAGAAATGGTTTGG+TGG 0.528192 1_1:-10781287 Msa0007520:three_prime_UTR
CGTACCGAGGGAGGGTTTCG+TGG 0.528383 1_1:-10781417 Msa0007520:CDS
CCAAGATTTGTGAGTCCTGC+GGG 0.528495 1_1:+10789894 None:intergenic
CGGTAAAGTCCCAGTGTCAA+AGG 0.533850 1_1:-10786858 Msa0007520:CDS
GGGAATAATGAAAGTGGGAA+TGG 0.533939 1_1:-10784009 Msa0007520:CDS
TTCTAATTTCTCTGAAGCAA+GGG 0.534535 1_1:-10787517 Msa0007520:CDS
GAACGCGGAAGTCTGGCATA+TGG 0.537243 1_1:-10789989 Msa0007520:CDS
TGTGAACACGGGGCAATGGT+GGG 0.538058 1_1:-10787637 Msa0007520:CDS
TGTTTCATCTCAGGTTGTGT+AGG 0.539372 1_1:-10781376 Msa0007520:exon
TCGAGGTAACCTTTGACACT+GGG 0.539858 1_1:+10786849 None:intergenic
CTGGCAAGTATCAAGATATG+AGG 0.540752 1_1:+10787254 None:intergenic
AGCTGGATCTTGTGAAGAGA+TGG 0.541393 1_1:-10784067 Msa0007520:CDS
TTTGTAGGTTGCAGCAGTGG+TGG 0.543504 1_1:-10785098 Msa0007520:intron
GTATCATCATCCCCTTGTCT+CGG 0.543714 1_1:+10790255 None:intergenic
CATAAAATACAGTATGGTGG+AGG 0.543820 1_1:-10786233 Msa0007520:intron
CAACTTACAGAAGACTCCCT+TGG 0.543918 1_1:+10784315 None:intergenic
AGACAAGGGGATGATGATAC+CGG 0.544080 1_1:-10790252 Msa0007520:CDS
GATTCGGTGAATGCTACAGC+TGG 0.545969 1_1:-10784084 Msa0007520:CDS
ATTTGTTGAAACAGATCGAC+GGG 0.548666 1_1:-10782618 Msa0007520:CDS
GCAAGGGTAGCTGACAGTAA+TGG 0.549569 1_1:-10787501 Msa0007520:CDS
TGGTGCATACTAAGTTCAGC+GGG 0.551015 1_1:+10787768 None:intergenic
GCCTGGGGCATACCTAGTGT+TGG 0.553296 1_1:-10781241 Msa0007520:three_prime_UTR
TGAGGACCAGTTGGCCAACT+GGG 0.553449 1_1:-10784037 Msa0007520:CDS
AGGATGTGAACACGGGGCAA+TGG 0.555447 1_1:-10787641 Msa0007520:CDS
TCACATGAGACACACTTCCC+CGG 0.555529 1_1:+10789559 None:intergenic
AGCACTCACGACTCATTGAA+AGG 0.555742 1_1:-10784374 Msa0007520:CDS
TTCCGCGTTCCACTTGGAGG+CGG 0.556093 1_1:+10790002 None:intergenic
CTTCGTACAATACCTTTGGA+AGG 0.556884 1_1:+10788502 None:intergenic
AGTTTCACAATCTTTACCCA+TGG 0.557454 1_1:-10787460 Msa0007520:CDS
TAGTCGTTCCAAAATTTCCA+AGG 0.557541 1_1:-10789607 Msa0007520:CDS
AAGCGGGTGCTTGTTCCCGA+GGG 0.558588 1_1:-10784973 Msa0007520:CDS
AGTACTACGTGTCTAGATCA+TGG 0.559586 1_1:-10786064 Msa0007520:CDS
GCAATGACAGAAGCAATGTC+AGG 0.560586 1_1:+10789643 None:intergenic
CAGAAAGGAATAAGGGGTGA+TGG 0.560626 1_1:-10786002 Msa0007520:CDS
CATGTAAATCCTTGTGCCTG+GGG 0.560924 1_1:-10781256 Msa0007520:three_prime_UTR
AATCATTTAAGCAACTTGCA+CGG 0.561749 1_1:-10786118 Msa0007520:CDS
CTAGATGAAAATGTCTCCAT+GGG 0.563087 1_1:+10787444 None:intergenic
GATACACAGCGTACCGAGGG+AGG 0.565981 1_1:-10781426 Msa0007520:CDS
CCGGAACTTCAGAAATATTG+AGG 0.567216 1_1:-10790233 Msa0007520:intron
GAGTTGGAGTTGAATGTCAA+GGG 0.567832 1_1:-10788693 Msa0007520:CDS
CACATCAAGGATGTGAACAC+GGG 0.570232 1_1:-10787648 Msa0007520:CDS
CGGTGTTAGATCAATTGGCT+CGG 0.573018 1_1:-10789770 Msa0007520:CDS
AGCAAGCAACTGGTGCTAAG+CGG 0.573541 1_1:-10784990 Msa0007520:CDS
TGTATGGCCAAAATTTCAAG+TGG 0.575617 1_1:-10781151 Msa0007520:three_prime_UTR
GACGGGTTTCTAAACGCTCC+AGG 0.575943 1_1:-10782601 Msa0007520:CDS
GAAACATTAAATGTGGTGAT+TGG 0.576683 1_1:-10784571 Msa0007520:CDS
GCGACTGTCTTCTAAAGCAT+GGG 0.577989 1_1:-10786822 Msa0007520:CDS
TGAAGCTCCTGTTAAACCAC+TGG 0.578029 1_1:-10787157 Msa0007520:CDS
TGTAATTCTTGTACGCGGAA+AGG 0.578271 1_1:-10782675 Msa0007520:CDS
TAAACTTAATTATTCCAATG+AGG 0.578751 1_1:-10782705 Msa0007520:CDS
CAATGAGCAGATCAACGGCT+CGG 0.579415 1_1:-10790293 Msa0007520:CDS
GAAGCAATGTCAGGAACTCA+TGG 0.579751 1_1:+10789652 None:intergenic
TGGAGTCTAAATGAAATGTA+GGG 0.580760 1_1:+10784893 None:intergenic
GATGAGCTTGTTACTAACTT+GGG 0.581232 1_1:-10787606 Msa0007520:CDS
TTTGTGAGTCATGTAAAACA+AGG 0.582663 1_1:-10788599 Msa0007520:CDS
TGACGAAAATACTACACTTG+TGG 0.582828 1_1:-10781625 Msa0007520:CDS
ATCAGCTTCAGATGGAGCAT+CGG 0.583704 1_1:+10785062 None:intergenic
TTTGCATGGAGGACTCTATG+AGG 0.584858 1_1:-10784831 Msa0007520:intron
GACGTGGTGCTATATTTCCA+AGG 0.585410 1_1:-10784332 Msa0007520:CDS
CTTTGTGGATACTAGGCAGG+TGG 0.586554 1_1:-10784204 Msa0007520:intron
GCAGTACAACCATAGGAAAG+AGG 0.586771 1_1:-10787232 Msa0007520:CDS
GCGCTATGTCTTCCTTCCAA+AGG 0.588885 1_1:-10788514 Msa0007520:intron
AAGCCTCCAAGATTGATCTA+GGG 0.589124 1_1:+10782648 None:intergenic
CTAGGTATGCCCCAGGCACA+AGG 0.590432 1_1:+10781247 None:intergenic
TGAGTTGGAGTTGAATGTCA+AGG 0.591934 1_1:-10788694 Msa0007520:CDS
GGTCCAGAATCAGCTTCAGA+TGG 0.594090 1_1:+10785054 None:intergenic
TGGAGATCAGATTATTGTGA+GGG 0.594741 1_1:-10781586 Msa0007520:CDS
ACAAACTTGGCTTACCCCAA+AGG 0.594910 1_1:+10782496 None:intergenic
TTTGGACTGTCTGATTGATG+GGG 0.595037 1_1:-10786183 Msa0007520:CDS
AGTTGGCCAACTGGGATAAG+GGG 0.595215 1_1:-10784029 Msa0007520:CDS
ACACGACAACCTGAACAGAC+TGG 0.595647 1_1:+10790065 None:intergenic
AATATGTGCAATCTAGAGAG+AGG 0.599323 1_1:+10784668 None:intergenic
GGTGTAGGTTATTAAAACAA+AGG 0.599431 1_1:-10784735 Msa0007520:intron
ATAAGGGGAATAATGAAAGT+GGG 0.600051 1_1:-10784014 Msa0007520:CDS
GTAGCTGACAGTAATGGAAG+TGG 0.604191 1_1:-10787495 Msa0007520:CDS
ATATGTGCAATCTAGAGAGA+GGG 0.605170 1_1:+10784669 None:intergenic
GGTCCCTAGATCAATCTTGG+AGG 0.605301 1_1:-10782651 Msa0007520:CDS
GGGCTGAAAATGTTACTCCA+AGG 0.605343 1_1:-10787092 Msa0007520:intron
AGAAGACAGTCGCTTTGTCG+AGG 0.606192 1_1:+10786832 None:intergenic
AAAATAAAAGACCGAGACAA+GGG 0.606853 1_1:-10790266 Msa0007520:CDS
GAATCTGCTAATTCACCCGC+AGG 0.608439 1_1:-10789909 Msa0007520:CDS
AAGGGAACTGCAGCTAATAG+TGG 0.609721 1_1:-10787684 Msa0007520:CDS
CTGGAGATCAGATTATTGTG+AGG 0.610377 1_1:-10781587 Msa0007520:CDS
TCATTACATAGCACACATCA+AGG 0.612605 1_1:-10787661 Msa0007520:CDS
GATTTGTTGAAACAGATCGA+CGG 0.612924 1_1:-10782619 Msa0007520:CDS
CTTGCCAGCAGTACAACCAT+AGG 0.613925 1_1:-10787239 Msa0007520:CDS
AATTGAGTCGTATCAGTGAG+AGG 0.615704 1_1:-10787206 Msa0007520:CDS
ACACATCAAGGATGTGAACA+CGG 0.616559 1_1:-10787649 Msa0007520:CDS
TTCGATCAAGACTTGTCCTG+AGG 0.617792 1_1:-10783980 Msa0007520:intron
AGACCAAAACATCCAACACT+AGG 0.618322 1_1:+10781229 None:intergenic
TTGTGAGTCATGTAAAACAA+GGG 0.618657 1_1:-10788598 Msa0007520:CDS
GATGATATGGGAATCCTTTG+GGG 0.619435 1_1:-10782510 Msa0007520:intron
CCTGAACTGATTCTCAGACG+TGG 0.622525 1_1:-10784348 Msa0007520:CDS
TTTCTTCAGAAAGGAATAAG+GGG 0.623466 1_1:-10786008 Msa0007520:CDS
TCCAACACTAGGTATGCCCC+AGG 0.627453 1_1:+10781240 None:intergenic
ATAAAATACAGTATGGTGGA+GGG 0.629754 1_1:-10786232 Msa0007520:intron
AATTCTTGTACGCGGAAAGG+AGG 0.630595 1_1:-10782672 Msa0007520:CDS
CTTCATAAAATACAGTATGG+TGG 0.632041 1_1:-10786236 Msa0007520:intron
GAGAGGGCTCAGACAATCTG+TGG 0.632527 1_1:+10787748 None:intergenic
GTATGGCCAAAATTTCAAGT+GGG 0.632694 1_1:-10781150 Msa0007520:three_prime_UTR
TTATACAATGAGCAGATCAA+CGG 0.633018 1_1:-10790298 Msa0007520:exon
AAGGATACACAGCGTACCGA+GGG 0.636484 1_1:-10781429 Msa0007520:CDS
TCCAAGATTTGTGAGTCCTG+CGG 0.638956 1_1:+10789893 None:intergenic
ATATATCAATTCAGACTGAG+AGG 0.639097 1_1:+10787731 None:intergenic
ATGAGCAGATCAACGGCTCG+GGG 0.642053 1_1:-10790291 Msa0007520:CDS
TTCCGCCTCCAAGTGGAACG+CGG 0.644073 1_1:-10790004 Msa0007520:CDS
TATGGCCAAAATTTCAAGTG+GGG 0.648080 1_1:-10781149 None:intergenic
CAGTCCTCGTGAGAAAGTGT+TGG 0.651283 1_1:+10786209 None:intergenic
TGTTCCACGAAACCCTCCCT+CGG 0.651998 1_1:+10781413 None:intergenic
GCATTGGTTCCGCCTCCAAG+TGG 0.652496 1_1:-10790011 Msa0007520:CDS
TATATCAATTCAGACTGAGA+GGG 0.653215 1_1:+10787732 None:intergenic
GTGGTGCATACTAAGTTCAG+CGG 0.654954 1_1:+10787767 None:intergenic
ATACACAGCGTACCGAGGGA+GGG 0.655824 1_1:-10781425 Msa0007520:CDS
CGTCTGAGAATCAGTTCAGG+AGG 0.656261 1_1:+10784351 None:intergenic
ACGTGGTGCTATATTTCCAA+GGG 0.657770 1_1:-10784331 Msa0007520:CDS
TGGGGTGCTACTGAAACCCA+AGG 0.657885 1_1:-10784135 Msa0007520:CDS
AAATAAAAGACCGAGACAAG+GGG 0.661443 1_1:-10790265 Msa0007520:CDS
TATGTGCAATCTAGAGAGAG+GGG 0.661724 1_1:+10784670 None:intergenic
CTATGAAGGTGCTCACAATG+TGG 0.664096 1_1:-10788756 Msa0007520:intron
AAAGGATACACAGCGTACCG+AGG 0.665910 1_1:-10781430 Msa0007520:CDS
GTCAGCTGTTCTGATACACA+AGG 0.666311 1_1:-10787703 Msa0007520:CDS
ATGGCCAAAATTTCAAGTGG+GGG 0.668491 1_1:-10781148 None:intergenic
ACATCTATCCAATGTTCACA+CGG 0.672493 1_1:-10786878 Msa0007520:CDS
GGACAACTAATAGCTGCTGT+TGG 0.674899 1_1:+10785033 None:intergenic
GCAGCTATTAGTTGTCCACA+TGG 0.675814 1_1:-10785027 Msa0007520:CDS
CACACCTGAAACATTAAATG+TGG 0.675913 1_1:-10784578 Msa0007520:CDS
CTTCTTCTGAAAATGGACAA+CGG 0.680788 1_1:+10787583 None:intergenic
CGAGCCAATTGATCTAACAC+CGG 0.691594 1_1:+10789771 None:intergenic
CATTAAGCTCTTCAACAGTG+AGG 0.699221 1_1:+10788637 None:intergenic
TCTTGGCTTTGATCCAAACA+CGG 0.701473 1_1:-10789940 Msa0007520:CDS
TGAAGAGATGGCAATATGTG+AGG 0.706020 1_1:-10784055 Msa0007520:CDS
AGGGCCAACACTTTCTCACG+AGG 0.708277 1_1:-10786213 Msa0007520:CDS
AAATGTTTCTGCGAAGAATG+GGG 0.715071 1_1:-10784153 Msa0007520:CDS
ACATCAAGGATGTGAACACG+GGG 0.725599 1_1:-10787647 Msa0007520:CDS
ATATGTGTAATTCTTGTACG+CGG 0.741407 1_1:-10782680 Msa0007520:CDS
TCAGGCATAAGTTGTCCATG+TGG 0.742403 1_1:+10785012 None:intergenic
TCAGCTGTTCTGATACACAA+GGG 0.748218 1_1:-10787702 Msa0007520:CDS
GGTGCATACTAAGTTCAGCG+GGG 0.797503 1_1:+10787769 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAGAG+TGG - chr1_1:10781773-10781792 Msa0007520:intron 10.0%
!! GATTTGTAAAAAAAAAAAAA+AGG - chr1_1:10781829-10781848 Msa0007520:intron 10.0%
!! ATAATAATTAAAACATCATT+TGG + chr1_1:10783318-10783337 None:intergenic 10.0%
!!! ATTTTTTTATAATTGGTAAT+GGG - chr1_1:10785735-10785754 Msa0007520:intron 10.0%
!!! TTGTTTTTTAACTTATCAAA+TGG - chr1_1:10782254-10782273 Msa0007520:intron 15.0%
!!! TTTTTGGTTCAATTTTTTTT+TGG - chr1_1:10784034-10784053 Msa0007520:CDS 15.0%
!!! TTTTGGTTCAATTTTTTTTT+GGG - chr1_1:10784035-10784054 Msa0007520:CDS 15.0%
!! TGAATACATATATCATAAAA+TGG + chr1_1:10784588-10784607 None:intergenic 15.0%
!!! ATTTTTCATATTGATTTAGA+AGG + chr1_1:10785705-10785724 None:intergenic 15.0%
!!! GATTTTTTTATAATTGGTAA+TGG - chr1_1:10785734-10785753 Msa0007520:intron 15.0%
!!! TTTTTTTATAATTGGTAATG+GGG - chr1_1:10785736-10785755 Msa0007520:intron 15.0%
!!! TGTTTTTATTTTAAGCTTTA+TGG - chr1_1:10786493-10786512 Msa0007520:intron 15.0%
!!! GTTTTTATTTTAAGCTTTAT+GGG - chr1_1:10786494-10786513 Msa0007520:intron 15.0%
!!! TTTTTATTTTAAGCTTTATG+GGG - chr1_1:10786495-10786514 Msa0007520:intron 15.0%
!! TAAACTTCATATAAATTAAG+AGG + chr1_1:10788633-10788652 None:intergenic 15.0%
!! TCTTAATTTATATGAAGTTT+AGG - chr1_1:10788632-10788651 Msa0007520:CDS 15.0%
!! CTTAATTTATATGAAGTTTA+GGG - chr1_1:10788633-10788652 Msa0007520:CDS 15.0%
!! AAAAATTAACTGAAATAAGT+TGG + chr1_1:10789541-10789560 None:intergenic 15.0%
!! TATTCTTGAACTAAATTTAT+TGG - chr1_1:10789583-10789602 Msa0007520:CDS 15.0%
!!! TTATTTTGTAGTTTAAATGT+TGG - chr1_1:10789977-10789996 Msa0007520:CDS 15.0%
!!! TAATTTTTTATTTCCATATC+TGG - chr1_1:10790726-10790745 Msa0007520:intron 15.0%
!!! TAGATATAGCTTGTTTATTT+TGG - chr1_1:10781976-10781995 Msa0007520:intron 20.0%
!! TGTAATTAGATCTAAGTAAT+GGG - chr1_1:10782000-10782019 Msa0007520:intron 20.0%
!!! TTTTTTCTTTTTTCTTTTCC+AGG - chr1_1:10782104-10782123 Msa0007520:intron 20.0%
!!! TTTTTCTTTTTTCTTTTCCA+GGG - chr1_1:10782105-10782124 Msa0007520:intron 20.0%
!! AATGCAATAAGCTAAAAAAA+TGG + chr1_1:10782953-10782972 None:intergenic 20.0%
!! TTGCACAAAAAATAATTCAA+GGG + chr1_1:10783277-10783296 None:intergenic 20.0%
!! TTTGCACAAAAAATAATTCA+AGG + chr1_1:10783278-10783297 None:intergenic 20.0%
!! GATAATATAATTATCCTTAC+TGG - chr1_1:10783394-10783413 Msa0007520:intron 20.0%
!!! CGAAGTTTGAATTTTATTAT+CGG - chr1_1:10783954-10783973 Msa0007520:intron 20.0%
!!! TTCATTGTTTACTTCATTTT+TGG - chr1_1:10784018-10784037 Msa0007520:CDS 20.0%
!!! TTTGGTTCAATTTTTTTTTG+GGG - chr1_1:10784036-10784055 Msa0007520:CDS 20.0%
!!! ACTCCAGTATATATATATTT+TGG - chr1_1:10784100-10784119 Msa0007520:CDS 20.0%
!! AGTCCAAAATATATATATAC+TGG + chr1_1:10784106-10784125 None:intergenic 20.0%
!!! TCTTTATGTAATTTGATTTG+AGG + chr1_1:10784218-10784237 None:intergenic 20.0%
!! TCACTATAAATCCAAAAATA+CGG + chr1_1:10785312-10785331 None:intergenic 20.0%
!!! TGTTATATTTTATTTGTGTG+TGG - chr1_1:10785417-10785436 Msa0007520:intron 20.0%
!!! GGTTATTTCACTTAATTTAT+GGG - chr1_1:10785498-10785517 Msa0007520:intron 20.0%
!!! GCTTGAGATTTTTTTATAAT+TGG - chr1_1:10785728-10785747 Msa0007520:intron 20.0%
!!! TTATGCTGTAGTTTTTTTTT+TGG - chr1_1:10785992-10786011 Msa0007520:intron 20.0%
!!! TATGCTGTAGTTTTTTTTTT+GGG - chr1_1:10785993-10786012 Msa0007520:intron 20.0%
!!! CTAGCTATAAATTTTCTTAT+GGG + chr1_1:10786918-10786937 None:intergenic 20.0%
!!! ACTAGCTATAAATTTTCTTA+TGG + chr1_1:10786919-10786938 None:intergenic 20.0%
!! AAAAATCAGAACAAATAGTT+AGG + chr1_1:10787236-10787255 None:intergenic 20.0%
!!! CAAATTAAATTCTGTTTTCA+TGG - chr1_1:10787682-10787701 Msa0007520:CDS 20.0%
!! GATTGAGAAAATTAATGATT+CGG - chr1_1:10788338-10788357 Msa0007520:intron 20.0%
!! TTAGCTTCATATAAATTAAG+AGG + chr1_1:10788752-10788771 None:intergenic 20.0%
!! TCTTAATTTATATGAAGCTA+AGG - chr1_1:10788751-10788770 Msa0007520:CDS 20.0%
!! CTTAATTTATATGAAGCTAA+GGG - chr1_1:10788752-10788771 Msa0007520:intron 20.0%
!! TTATAGATTATGGCTTATAA+CGG - chr1_1:10788802-10788821 Msa0007520:intron 20.0%
!! TAGGAAAATTAGAAAAATCA+AGG + chr1_1:10789262-10789281 None:intergenic 20.0%
!!! TTTAGTTCAAGAATATACAA+AGG + chr1_1:10789578-10789597 None:intergenic 20.0%
!! TAAACTTAATTATTCCAATG+AGG - chr1_1:10789733-10789752 Msa0007520:CDS 20.0%
!! TCATGTCATCATATAATTAA+AGG - chr1_1:10790357-10790376 Msa0007520:intron 20.0%
!! CATGTCATCATATAATTAAA+GGG - chr1_1:10790358-10790377 Msa0007520:intron 20.0%
!!! TGTAATTTTGCTTAATCTAA+CGG + chr1_1:10790440-10790459 None:intergenic 20.0%
!! TACAAGACTTTATTATTCAT+TGG - chr1_1:10790456-10790475 Msa0007520:intron 20.0%
!! TGTATGTATATATATACTTC+AGG - chr1_1:10791113-10791132 Msa0007520:intron 20.0%
!!! TTATATCCAGATTTTATGTA+TGG - chr1_1:10791271-10791290 Msa0007520:five_prime_UTR 20.0%
!! ATTTGCTGATTGAAATTTCT+AGG - chr1_1:10781367-10781386 Msa0007520:exon 25.0%
!! TTTGCTGATTGAAATTTCTA+GGG - chr1_1:10781368-10781387 Msa0007520:exon 25.0%
!! CATTTACTTGTGTCATTAAA+TGG + chr1_1:10781595-10781614 None:intergenic 25.0%
! CTGTAATTAGATCTAAGTAA+TGG - chr1_1:10781999-10782018 Msa0007520:intron 25.0%
! CAAATGGAATTAGAACTTAT+TGG - chr1_1:10782270-10782289 Msa0007520:intron 25.0%
! TGTAGGAAAATATACAAAAC+AGG - chr1_1:10782304-10782323 Msa0007520:intron 25.0%
! GTTTATTCATATACAAGCAT+TGG + chr1_1:10782597-10782616 None:intergenic 25.0%
! ACAGTTGCATTTAAGTAAAA+AGG - chr1_1:10782699-10782718 Msa0007520:CDS 25.0%
! ATTATAAATCTCTGTCTTTG+TGG - chr1_1:10782970-10782989 Msa0007520:intron 25.0%
! TTATAAATCTCTGTCTTTGT+GGG - chr1_1:10782971-10782990 Msa0007520:intron 25.0%
! TCACATATGATAGAACATTA+TGG - chr1_1:10783032-10783051 Msa0007520:intron 25.0%
! AGTAAACAATGAAAAACACA+AGG + chr1_1:10784011-10784030 None:intergenic 25.0%
!!! TTGGTTCAATTTTTTTTTGG+GGG - chr1_1:10784037-10784056 Msa0007520:CDS 25.0%
! AAAATTAGATATCCTCTTTG+TGG - chr1_1:10784129-10784148 Msa0007520:CDS 25.0%
!! AAAAAAAACTGACAGTTTTC+AGG + chr1_1:10784169-10784188 None:intergenic 25.0%
! ACTGTTCAAATCAAATATCT+TGG - chr1_1:10784258-10784277 Msa0007520:intron 25.0%
!! GAAAGAGAAAGAACTTTTAA+CGG - chr1_1:10784374-10784393 Msa0007520:CDS 25.0%
!! AGTTTTGCCAAGTAAAATAA+TGG + chr1_1:10784416-10784435 None:intergenic 25.0%
!!! TCATTTTATTTTGTTTCCTC+TGG - chr1_1:10784605-10784624 Msa0007520:CDS 25.0%
! TAAATCTGTTAAGAATGATC+TGG - chr1_1:10784894-10784913 Msa0007520:CDS 25.0%
! AAAATTTGGTATGCTTAAGA+TGG + chr1_1:10785041-10785060 None:intergenic 25.0%
!!! ACCAAATTTTTTAGTGAGAA+CGG - chr1_1:10785051-10785070 Msa0007520:CDS 25.0%
!!! ATTTTTGGATTTATAGTGAC+TGG - chr1_1:10785313-10785332 Msa0007520:intron 25.0%
!! GGGTTATTTCACTTAATTTA+TGG - chr1_1:10785497-10785516 Msa0007520:intron 25.0%
!!! ATGATTCCATTTTTTGATCT+TGG - chr1_1:10785675-10785694 Msa0007520:intron 25.0%
!! TTCTATTCTAAGTATTGTGA+TGG - chr1_1:10785800-10785819 Msa0007520:intron 25.0%
! ATTAGCAACAATGACATTAT+AGG + chr1_1:10786154-10786173 None:intergenic 25.0%
! ATGCTTCATAAAATACAGTA+TGG - chr1_1:10786199-10786218 Msa0007520:CDS 25.0%
!! TATTCCATTTTCTATTGTTC+TGG - chr1_1:10786466-10786485 Msa0007520:intron 25.0%
! ATTTCCAGAACAATAGAAAA+TGG + chr1_1:10786473-10786492 None:intergenic 25.0%
! AAAGCTAATAACAAAACAGA+AGG - chr1_1:10786592-10786611 Msa0007520:intron 25.0%
! AAGCTAATAACAAAACAGAA+GGG - chr1_1:10786593-10786612 Msa0007520:intron 25.0%
! AAAATTGCGTTGTATTATTG+TGG - chr1_1:10786711-10786730 Msa0007520:intron 25.0%
! CTATACTAAACTAAACTAAC+TGG - chr1_1:10786822-10786841 Msa0007520:CDS 25.0%
!! CTATAAATTTTCTTATGGGT+GGG + chr1_1:10786914-10786933 None:intergenic 25.0%
! AAGAAAATTTATAGCTAGTG+AGG - chr1_1:10786920-10786939 Msa0007520:intron 25.0%
! AGAAAATTTATAGCTAGTGA+GGG - chr1_1:10786921-10786940 Msa0007520:intron 25.0%
! ATGATACCATATTAGGTATT+GGG + chr1_1:10787034-10787053 None:intergenic 25.0%
! AATGATACCATATTAGGTAT+TGG + chr1_1:10787035-10787054 None:intergenic 25.0%
! ATAGGAAATGATACCATATT+AGG + chr1_1:10787041-10787060 None:intergenic 25.0%
! ATTTCCTATCCTAAATCTAT+TGG - chr1_1:10787052-10787071 Msa0007520:intron 25.0%
! TTTCCTATCCTAAATCTATT+GGG - chr1_1:10787053-10787072 Msa0007520:intron 25.0%
!!! AAATAGTTAGGTTTTGGAAT+GGG + chr1_1:10787224-10787243 None:intergenic 25.0%
! AAAAGTAAACTCAGATCAAA+AGG + chr1_1:10787323-10787342 None:intergenic 25.0%
! TCAAGCATAGAAAAATGAAA+TGG + chr1_1:10787967-10787986 None:intergenic 25.0%
! ATGATATTCAAAATGACGAA+GGG + chr1_1:10788163-10788182 None:intergenic 25.0%
! AATGATATTCAAAATGACGA+AGG + chr1_1:10788164-10788183 None:intergenic 25.0%
!! ATTCTAATTTCTGAAAGACT+TGG + chr1_1:10788567-10788586 None:intergenic 25.0%
! ATTAGACAACTAATCCTTTA+TGG - chr1_1:10788602-10788621 Msa0007520:CDS 25.0%
! ATTAAGAGGAAATACCATAA+AGG + chr1_1:10788619-10788638 None:intergenic 25.0%
! ATTAGACAACTAATCCTTTA+TGG - chr1_1:10788602-10788621 Msa0007520:CDS 25.0%
!! ATAAGCTAGCTTATAGATTA+TGG - chr1_1:10788792-10788811 Msa0007520:intron 25.0%
! ATCTTTAGCATTACTCATAA+CGG - chr1_1:10789004-10789023 Msa0007520:intron 25.0%
! ATGTGATGAAAATAGGAAAT+AGG + chr1_1:10789281-10789300 None:intergenic 25.0%
!!! TAACTGAAATAAGTTGGTAA+TGG + chr1_1:10789535-10789554 None:intergenic 25.0%
! AATTACACATATATCCTCAT+TGG + chr1_1:10789750-10789769 None:intergenic 25.0%
! ATATCAATACAGAACAAACT+TGG + chr1_1:10789958-10789977 None:intergenic 25.0%
! CTAACTTTATGTGGTTAAAA+TGG - chr1_1:10790004-10790023 Msa0007520:CDS 25.0%
!! AGAATTTTCACAAAACTCAT+TGG + chr1_1:10790174-10790193 None:intergenic 25.0%
! TTATTATTCATTGGCCATAT+TGG - chr1_1:10790465-10790484 Msa0007520:intron 25.0%
! ACTTGTAGTAGACATAAATT+AGG - chr1_1:10790595-10790614 Msa0007520:intron 25.0%
! CTTGTAGTAGACATAAATTA+GGG - chr1_1:10790596-10790615 Msa0007520:intron 25.0%
! TGATAAACTGAAAATAGACT+TGG - chr1_1:10790625-10790644 Msa0007520:intron 25.0%
! GAAAATCAGATACTACAAAA+AGG - chr1_1:10790769-10790788 Msa0007520:intron 25.0%
! AACAATTGAATGAGAAGAAA+TGG - chr1_1:10791143-10791162 Msa0007520:intron 25.0%
! ATTTTCACAAGTTCACTCTA+TGG + chr1_1:10781483-10781502 None:intergenic 30.0%
AGGTATATCAAGTTCATACA+TGG - chr1_1:10781849-10781868 Msa0007520:intron 30.0%
TTATACAATGAGCAGATCAA+CGG - chr1_1:10782140-10782159 Msa0007520:intron 30.0%
AAAAATAAAAGACCGAGACA+AGG - chr1_1:10782171-10782190 Msa0007520:intron 30.0%
AAAATAAAAGACCGAGACAA+GGG - chr1_1:10782172-10782191 Msa0007520:intron 30.0%
TATTGGTACTTTCTTTGTGT+AGG - chr1_1:10782287-10782306 Msa0007520:intron 30.0%
!!! TCTGATTTTGTTGATAGTCT+TGG - chr1_1:10782481-10782500 Msa0007520:intron 30.0%
!! ATGAATAAACGTTTTCGAGA+AGG - chr1_1:10782607-10782626 Msa0007520:CDS 30.0%
!! AGATATTTTTCAGCAACAAC+CGG - chr1_1:10782648-10782667 Msa0007520:CDS 30.0%
TTCTCCATTTGTAAAAACGT+TGG - chr1_1:10782735-10782754 Msa0007520:CDS 30.0%
! AACTCCAACGTTTTTACAAA+TGG + chr1_1:10782742-10782761 None:intergenic 30.0%
ATTTGTAAAAACGTTGGAGT+TGG - chr1_1:10782741-10782760 Msa0007520:CDS 30.0%
TATAAATCTCTGTCTTTGTG+GGG - chr1_1:10782972-10782991 Msa0007520:intron 30.0%
! TTTTGTGCTGAATTAACGTT+TGG - chr1_1:10783337-10783356 Msa0007520:intron 30.0%
AACACAAACACTTCAAGAAA+AGG + chr1_1:10783596-10783615 None:intergenic 30.0%
! TTGAAGTGTTTGTGTTTCAT+TGG - chr1_1:10783600-10783619 Msa0007520:intron 30.0%
! ATTTTCCCACTTTACTATGA+AGG - chr1_1:10783668-10783687 Msa0007520:intron 30.0%
TTTGTGAGTCATGTAAAACA+AGG - chr1_1:10783839-10783858 Msa0007520:intron 30.0%
TTGTGAGTCATGTAAAACAA+GGG - chr1_1:10783840-10783859 Msa0007520:intron 30.0%
TTTAACGGTTATACAGAAGA+AGG - chr1_1:10784389-10784408 Msa0007520:intron 30.0%
!! AGAAGGACCATTATTTTACT+TGG - chr1_1:10784406-10784425 Msa0007520:intron 30.0%
! TTTTACTTGGCAAAACTGTT+TGG - chr1_1:10784419-10784438 Msa0007520:intron 30.0%
!! CAAAACTGTTTGGTGTATTA+TGG - chr1_1:10784429-10784448 Msa0007520:intron 30.0%
TTGGTGTATTATGGCTAATT+TGG - chr1_1:10784438-10784457 Msa0007520:intron 30.0%
!!! TACATGCTTTTTCTTTCTCT+GGG - chr1_1:10784516-10784535 Msa0007520:intron 30.0%
TATATCAATTCAGACTGAGA+GGG + chr1_1:10784709-10784728 None:intergenic 30.0%
ATATATCAATTCAGACTGAG+AGG + chr1_1:10784710-10784729 None:intergenic 30.0%
!! ATTCTAATTTCTCTGAAGCA+AGG - chr1_1:10784920-10784939 Msa0007520:CDS 30.0%
!! TTCTAATTTCTCTGAAGCAA+GGG - chr1_1:10784921-10784940 Msa0007520:CDS 30.0%
!!! CCAAATTTTTTAGTGAGAAC+GGG - chr1_1:10785052-10785071 Msa0007520:CDS 30.0%
!!! CAAATTTTTTAGTGAGAACG+GGG - chr1_1:10785053-10785072 Msa0007520:CDS 30.0%
!!! AAATTTTTTAGTGAGAACGG+GGG - chr1_1:10785054-10785073 Msa0007520:CDS 30.0%
TCATTATCTTGTGCAGTAAT+TGG + chr1_1:10785120-10785139 None:intergenic 30.0%
ATCTCTTCACAAAAATGAGA+AGG + chr1_1:10785150-10785169 None:intergenic 30.0%
GCATATGCTTTATGTATTCT+TGG - chr1_1:10785374-10785393 Msa0007520:intron 30.0%
! ATTCCTTGTATCATTTGCTA+GGG - chr1_1:10785472-10785491 Msa0007520:intron 30.0%
!! AGTATTGTGATGGATAATAC+TGG - chr1_1:10785810-10785829 Msa0007520:intron 30.0%
CCTCACTCTGATAAAAAAAA+AGG + chr1_1:10785848-10785867 None:intergenic 30.0%
!!! CCTTTTTTTTTATCAGAGTG+AGG - chr1_1:10785845-10785864 Msa0007520:intron 30.0%
!! CTGTATTTTATGAAGCATCA+AGG + chr1_1:10786197-10786216 None:intergenic 30.0%
CTTCATAAAATACAGTATGG+TGG - chr1_1:10786202-10786221 Msa0007520:CDS 30.0%
! ATAAAATACAGTATGGTGGA+GGG - chr1_1:10786206-10786225 Msa0007520:CDS 30.0%
AATCATTTAAGCAACTTGCA+CGG - chr1_1:10786320-10786339 Msa0007520:intron 30.0%
TCTCAGATCATACATAATAC+TGG + chr1_1:10786521-10786540 None:intergenic 30.0%
! GTATAAGCATTGTCTTGTAT+TGG + chr1_1:10786647-10786666 None:intergenic 30.0%
TACAAGACAATGCTTATACT+AGG - chr1_1:10786648-10786667 Msa0007520:intron 30.0%
! TGATAGTGTGTTTGTTTAGT+TGG + chr1_1:10786851-10786870 None:intergenic 30.0%
! GCTATAAATTTTCTTATGGG+TGG + chr1_1:10786915-10786934 None:intergenic 30.0%
GAAAATTTATAGCTAGTGAG+GGG - chr1_1:10786922-10786941 Msa0007520:intron 30.0%
! TGATACCATATTAGGTATTG+GGG + chr1_1:10787033-10787052 None:intergenic 30.0%
!!! AGCTAAATAGTGGTTTTAAG+TGG - chr1_1:10787153-10787172 Msa0007520:CDS 30.0%
!!! TAAATAGTGGTTTTAAGTGG+TGG - chr1_1:10787156-10787175 Msa0007520:CDS 30.0%
!!! AAATAGTGGTTTTAAGTGGT+GGG - chr1_1:10787157-10787176 Msa0007520:CDS 30.0%
!!! CTTAGAAGTTAGTTTTGCAA+GGG - chr1_1:10787189-10787208 Msa0007520:CDS 30.0%
!!! CAAATAGTTAGGTTTTGGAA+TGG + chr1_1:10787225-10787244 None:intergenic 30.0%
! CAGAACAAATAGTTAGGTTT+TGG + chr1_1:10787230-10787249 None:intergenic 30.0%
!! TGATCTGAGTTTACTTTTGT+AGG - chr1_1:10787325-10787344 Msa0007520:CDS 30.0%
!! AAGATCATTTTTCACAGAAG+TGG + chr1_1:10787517-10787536 None:intergenic 30.0%
TTCTGTGAAAAATGATCTTC+TGG - chr1_1:10787518-10787537 Msa0007520:CDS 30.0%
TGGAGTCTAAATGAAATGTA+GGG + chr1_1:10787548-10787567 None:intergenic 30.0%
TTGGAGTCTAAATGAAATGT+AGG + chr1_1:10787549-10787568 None:intergenic 30.0%
!! ATTATCTGAAGTGTTTTGCA+TGG - chr1_1:10787593-10787612 Msa0007520:CDS 30.0%
! AAATTCTGTTTTCATGGTGT+AGG - chr1_1:10787688-10787707 Msa0007520:CDS 30.0%
GGTGTAGGTTATTAAAACAA+AGG - chr1_1:10787703-10787722 Msa0007520:CDS 30.0%
ATCACCACATTTAATGTTTC+AGG + chr1_1:10787867-10787886 None:intergenic 30.0%
GAAACATTAAATGTGGTGAT+TGG - chr1_1:10787867-10787886 Msa0007520:intron 30.0%
GATCTAAATCTGCAACTAAA+TGG + chr1_1:10787928-10787947 None:intergenic 30.0%
AAATGGCAATTGAAGAGTTA+AGG + chr1_1:10787950-10787969 None:intergenic 30.0%
ATAAGGGGAATAATGAAAGT+GGG - chr1_1:10788424-10788443 Msa0007520:intron 30.0%
!! GACTTGGCTTTAAAAAACTT+AGG + chr1_1:10788551-10788570 None:intergenic 30.0%
ATTAAGAGGAAATGCCATAA+AGG + chr1_1:10788738-10788757 None:intergenic 30.0%
GCTATAAGCACATAATGAAA+AGG + chr1_1:10789069-10789088 None:intergenic 30.0%
TGTTAGCTGATAGCTTATAA+CGG + chr1_1:10789153-10789172 None:intergenic 30.0%
CTCTGTTTGGTAAAAAATAG+CGG + chr1_1:10789193-10789212 None:intergenic 30.0%
GAAGATAAGCATGAACATTT+AGG + chr1_1:10789216-10789235 None:intergenic 30.0%
ACTATGCATGTGATGAAAAT+AGG + chr1_1:10789288-10789307 None:intergenic 30.0%
!! GTTGGTAATGGAATTTATGT+GGG + chr1_1:10789523-10789542 None:intergenic 30.0%
!! AGTTGGTAATGGAATTTATG+TGG + chr1_1:10789524-10789543 None:intergenic 30.0%
CAAGTTCGTATTCTCTTTAT+AGG - chr1_1:10789606-10789625 Msa0007520:CDS 30.0%
ATATGTGTAATTCTTGTACG+CGG - chr1_1:10789758-10789777 Msa0007520:CDS 30.0%
TTTGTAGTTTAAATGTTGGC+TGG - chr1_1:10789981-10790000 Msa0007520:CDS 30.0%
TTTATGTGGTTAAAATGGTG+TGG - chr1_1:10790009-10790028 Msa0007520:CDS 30.0%
!! ATGCTTGTTGATTCTTGAAT+GGG - chr1_1:10790114-10790133 Msa0007520:CDS 30.0%
GCACATACAATATTGCTAAA+TGG - chr1_1:10790221-10790240 Msa0007520:intron 30.0%
TTGCTAAATGGAGCTTATAT+TGG - chr1_1:10790233-10790252 Msa0007520:intron 30.0%
TAAATGGAGCTTATATTGGT+AGG - chr1_1:10790237-10790256 Msa0007520:CDS 30.0%
!! TGGTAGGTTATTGTTACTTT+AGG - chr1_1:10790253-10790272 Msa0007520:CDS 30.0%
!! GGTAGGTTATTGTTACTTTA+GGG - chr1_1:10790254-10790273 Msa0007520:CDS 30.0%
CTTATAGATTTAGCAATCAG+GGG + chr1_1:10790302-10790321 None:intergenic 30.0%
CCTTATAGATTTAGCAATCA+GGG + chr1_1:10790303-10790322 None:intergenic 30.0%
TCTATAAGGCTCTTAAACAT+AGG - chr1_1:10790314-10790333 Msa0007520:five_prime_UTR 30.0%
ATTATATGATGACATGAAGC+TGG + chr1_1:10790354-10790373 None:intergenic 30.0%
ATAATTAAAGGGCAGATTGT+AGG - chr1_1:10790369-10790388 Msa0007520:intron 30.0%
TAATTAAAGGGCAGATTGTA+GGG - chr1_1:10790370-10790389 Msa0007520:intron 30.0%
!!! AATCTAACGGTTTTAGAATG+TGG + chr1_1:10790427-10790446 None:intergenic 30.0%
TGTTCATTTCTGTTCATAAG+AGG + chr1_1:10790952-10790971 None:intergenic 30.0%
TTGAATGAGAAGAAATGGTT+TGG - chr1_1:10791148-10791167 Msa0007520:intron 30.0%
TCCAAAATTTGCCATTACTA+GGG + chr1_1:10791240-10791259 None:intergenic 30.0%
TTCCAAAATTTGCCATTACT+AGG + chr1_1:10791241-10791260 None:intergenic 30.0%
! TTTTGGCCATACATAAAATC+TGG + chr1_1:10791280-10791299 None:intergenic 30.0%
! AGTTTAGGCCCTATATTTTG+AGG - chr1_1:10781704-10781723 Msa0007520:intron 35.0%
!! GTTTAGGCCCTATATTTTGA+GGG - chr1_1:10781705-10781724 Msa0007520:intron 35.0%
!! TTTAGGCCCTATATTTTGAG+GGG - chr1_1:10781706-10781725 Msa0007520:intron 35.0%
!! TTAGATCTAAGTAATGGGTG+TGG - chr1_1:10782005-10782024 Msa0007520:intron 35.0%
AAATAAAAGACCGAGACAAG+GGG - chr1_1:10782173-10782192 Msa0007520:intron 35.0%
!! CCTCAATATTTCTGAAGTTC+CGG + chr1_1:10782208-10782227 None:intergenic 35.0%
! CAGAAATATTGAGGTACTAC+AGG - chr1_1:10782214-10782233 Msa0007520:intron 35.0%
GGTTGTTGCTGAAAAATATC+TGG + chr1_1:10782649-10782668 None:intergenic 35.0%
!!! TGGAAATTTTGGAACGACTA+AGG + chr1_1:10782831-10782850 None:intergenic 35.0%
TAGTCGTTCCAAAATTTCCA+AGG - chr1_1:10782831-10782850 Msa0007520:intron 35.0%
! CGATAGTTCAAGATCTTTTC+CGG - chr1_1:10782860-10782879 Msa0007520:intron 35.0%
! GATAGTTCAAGATCTTTTCC+GGG - chr1_1:10782861-10782880 Msa0007520:intron 35.0%
! ATAGTTCAAGATCTTTTCCG+GGG - chr1_1:10782862-10782881 Msa0007520:intron 35.0%
GTGACAACGTAAGAAATCAT+TGG - chr1_1:10782898-10782917 Msa0007520:intron 35.0%
TACTTGAGTATGTAGTGAAG+AGG + chr1_1:10783166-10783185 None:intergenic 35.0%
TAAGATACACCTCTGTTTGT+TGG - chr1_1:10783248-10783267 Msa0007520:intron 35.0%
AAGATACACCTCTGTTTGTT+GGG - chr1_1:10783249-10783268 Msa0007520:intron 35.0%
! GATCAAAAGTTAAGAAGCAC+AGG - chr1_1:10783443-10783462 Msa0007520:intron 35.0%
! CTCATAGAAGTCTTCCATTT+TGG + chr1_1:10783728-10783747 None:intergenic 35.0%
AATGGAAGACTTCTATGAGT+TGG - chr1_1:10783729-10783748 Msa0007520:intron 35.0%
AGCTGAAAATTAAGCACATC+AGG + chr1_1:10783901-10783920 None:intergenic 35.0%
CAAACTTCGTACAATACCTT+TGG + chr1_1:10783943-10783962 None:intergenic 35.0%
!!! CTACATGCTTTTTCTTTCTC+TGG - chr1_1:10784515-10784534 Msa0007520:intron 35.0%
TCATTACATAGCACACATCA+AGG - chr1_1:10784777-10784796 Msa0007520:intron 35.0%
!! TGATGAGCTTGTTACTAACT+TGG - chr1_1:10784831-10784850 Msa0007520:intron 35.0%
!! GATGAGCTTGTTACTAACTT+GGG - chr1_1:10784832-10784851 Msa0007520:CDS 35.0%
! CTTCTTCTGAAAATGGACAA+CGG + chr1_1:10784858-10784877 None:intergenic 35.0%
! CATGAAGCTTCTTCTGAAAA+TGG + chr1_1:10784865-10784884 None:intergenic 35.0%
AGTTTCACAATCTTTACCCA+TGG - chr1_1:10784978-10784997 Msa0007520:CDS 35.0%
CTAGATGAAAATGTCTCCAT+GGG + chr1_1:10784997-10785016 None:intergenic 35.0%
ACTAGATGAAAATGTCTCCA+TGG + chr1_1:10784998-10785017 None:intergenic 35.0%
CCCGTTCTCACTAAAAAATT+TGG + chr1_1:10785055-10785074 None:intergenic 35.0%
TCAATTCTACCTCTTTCCTA+TGG + chr1_1:10785218-10785237 None:intergenic 35.0%
TAAAGCATATGCACTAACCT+TGG + chr1_1:10785366-10785385 None:intergenic 35.0%
ACAAACTATTGATGTGCTCT+TGG + chr1_1:10785400-10785419 None:intergenic 35.0%
CATTCCTTGTATCATTTGCT+AGG - chr1_1:10785471-10785490 Msa0007520:intron 35.0%
! TTGTATCATTTGCTAGGGTA+GGG - chr1_1:10785477-10785496 Msa0007520:intron 35.0%
ACATCTATCCAATGTTCACA+CGG - chr1_1:10785560-10785579 Msa0007520:intron 35.0%
ATGGGATAAGTTACTGTCTA+AGG - chr1_1:10785634-10785653 Msa0007520:intron 35.0%
ACGAATATTCTTTGTAACGC+AGG + chr1_1:10785935-10785954 None:intergenic 35.0%
CATAAAATACAGTATGGTGG+AGG - chr1_1:10786205-10786224 Msa0007520:CDS 35.0%
ATCATTTAAGCAACTTGCAC+GGG - chr1_1:10786321-10786340 Msa0007520:intron 35.0%
CTTGATGGAAAAAACGTAGA+TGG - chr1_1:10786349-10786368 Msa0007520:intron 35.0%
! TCGTTTCTGTTTCTTCAGAA+AGG - chr1_1:10786421-10786440 Msa0007520:intron 35.0%
TATGTATGATCTGAGAGAGA+AGG - chr1_1:10786525-10786544 Msa0007520:intron 35.0%
AATACACATCGATGCTTAAC+AGG - chr1_1:10786617-10786636 Msa0007520:intron 35.0%
CTAGGAAAGAGCTAGAAAAT+TGG - chr1_1:10786666-10786685 Msa0007520:intron 35.0%
AGCTAGAAAATTGGATAGCA+TGG - chr1_1:10786675-10786694 Msa0007520:intron 35.0%
GCTAGAAAATTGGATAGCAT+GGG - chr1_1:10786676-10786695 Msa0007520:intron 35.0%
AAATAGAACCAGTTGACTGT+TGG + chr1_1:10786759-10786778 None:intergenic 35.0%
!! ACAGTCAACTGGTTCTATTT+CGG - chr1_1:10786759-10786778 Msa0007520:intron 35.0%
GCTTACATTGGATAGTGATA+TGG - chr1_1:10786944-10786963 Msa0007520:intron 35.0%
CATCTCTCATCTTACAAGTT+AGG - chr1_1:10786983-10787002 Msa0007520:intron 35.0%
ATCTTACAAGTTAGGCTTGT+GGG - chr1_1:10786991-10787010 Msa0007520:intron 35.0%
TCAACACACTTCTTACACTT+AGG + chr1_1:10787108-10787127 None:intergenic 35.0%
TAGTGACATGAGCTAAATAG+TGG - chr1_1:10787143-10787162 Msa0007520:CDS 35.0%
!! CAAAACTAACTTCTAAGGTG+AGG + chr1_1:10787186-10787205 None:intergenic 35.0%
CCTTGCAAAACTAACTTCTA+AGG + chr1_1:10787191-10787210 None:intergenic 35.0%
!!! CCTTAGAAGTTAGTTTTGCA+AGG - chr1_1:10787188-10787207 Msa0007520:CDS 35.0%
ATCTACTTCACCAAGTTGTT+AGG - chr1_1:10787271-10787290 Msa0007520:CDS 35.0%
TCTACTTCACCAAGTTGTTA+GGG - chr1_1:10787272-10787291 Msa0007520:CDS 35.0%
TTTGAACAACCCTAACAACT+TGG + chr1_1:10787284-10787303 None:intergenic 35.0%
AGTCATGAGAAGTTGTTCAA+TGG - chr1_1:10787735-10787754 Msa0007520:CDS 35.0%
GTCATGAGAAGTTGTTCAAT+GGG - chr1_1:10787736-10787755 Msa0007520:CDS 35.0%
ATATGTGCAATCTAGAGAGA+GGG + chr1_1:10787772-10787791 None:intergenic 35.0%
AATATGTGCAATCTAGAGAG+AGG + chr1_1:10787773-10787792 None:intergenic 35.0%
ATTTCTTAGTTCCTTCCTCT+TGG - chr1_1:10787790-10787809 Msa0007520:CDS 35.0%
!!! CATTTTGAAATCCAAGAGGA+AGG + chr1_1:10787804-10787823 None:intergenic 35.0%
CTTCCTCTTGGATTTCAAAA+TGG - chr1_1:10787802-10787821 Msa0007520:CDS 35.0%
!!! TCTCCATTTTGAAATCCAAG+AGG + chr1_1:10787808-10787827 None:intergenic 35.0%
CACACCTGAAACATTAAATG+TGG - chr1_1:10787860-10787879 Msa0007520:intron 35.0%
AACCTGTAGCAATTTCAGAA+TGG - chr1_1:10788017-10788036 Msa0007520:intron 35.0%
!! ATCCATTCTGAAATTGCTAC+AGG + chr1_1:10788022-10788041 None:intergenic 35.0%
CCAATCATTCTCAGATATGA+TGG + chr1_1:10788265-10788284 None:intergenic 35.0%
CCATCATATCTGAGAATGAT+TGG - chr1_1:10788262-10788281 Msa0007520:intron 35.0%
! GAAATGTTTCTGCGAAGAAT+GGG - chr1_1:10788284-10788303 Msa0007520:intron 35.0%
! AAATGTTTCTGCGAAGAATG+GGG - chr1_1:10788285-10788304 Msa0007520:intron 35.0%
AATCTTTGCAGATACTCCTT+GGG + chr1_1:10788322-10788341 None:intergenic 35.0%
GATAAGGGGAATAATGAAAG+TGG - chr1_1:10788423-10788442 Msa0007520:intron 35.0%
!!! GTAGAGTTTTAGATTACCTC+AGG + chr1_1:10788477-10788496 None:intergenic 35.0%
AAACTCTACCAACATTCTGT+TGG - chr1_1:10788488-10788507 Msa0007520:intron 35.0%
TAGCATATCCAACAGAATGT+TGG + chr1_1:10788499-10788518 None:intergenic 35.0%
GCACAAGAAAATCAAGATCA+GGG + chr1_1:10788529-10788548 None:intergenic 35.0%
! TATGAAGTTTAGGGTCTGTT+TGG - chr1_1:10788642-10788661 Msa0007520:CDS 35.0%
! AGATTATGGCTTATAACGGA+TGG - chr1_1:10788806-10788825 Msa0007520:intron 35.0%
!! GATTATGGCTTATAACGGAT+GGG - chr1_1:10788807-10788826 Msa0007520:intron 35.0%
CTGATGTGCTAAATAGAGAT+AGG - chr1_1:10788875-10788894 Msa0007520:intron 35.0%
TAGGTTATAACTTCCGAAAC+TGG - chr1_1:10788894-10788913 Msa0007520:intron 35.0%
GAAAAGGTTGTTACCAAACA+GGG + chr1_1:10789053-10789072 None:intergenic 35.0%
TGAAAAGGTTGTTACCAAAC+AGG + chr1_1:10789054-10789073 None:intergenic 35.0%
ATGAACATTTAGGCTCTGTT+TGG + chr1_1:10789206-10789225 None:intergenic 35.0%
TATAGCTTCTCAAGTACAAC+TGG + chr1_1:10789238-10789257 None:intergenic 35.0%
TGTCTTAAAAAAGCTGCTTC+CGG - chr1_1:10789369-10789388 Msa0007520:intron 35.0%
ATTTATGTGGGTGAACAGAA+GGG + chr1_1:10789511-10789530 None:intergenic 35.0%
AATTTATGTGGGTGAACAGA+AGG + chr1_1:10789512-10789531 None:intergenic 35.0%
TGAAAGTTGCATTGGAGAAA+AGG - chr1_1:10789691-10789710 Msa0007520:CDS 35.0%
!! GATTTGTTGAAACAGATCGA+CGG - chr1_1:10789819-10789838 Msa0007520:CDS 35.0%
! ATTTGTTGAAACAGATCGAC+GGG - chr1_1:10789820-10789839 Msa0007520:CDS 35.0%
GCTCCAGGAAGATTAAAAAT+GGG - chr1_1:10789852-10789871 Msa0007520:CDS 35.0%
!! ACTCCCATTTTTAATCTTCC+TGG + chr1_1:10789858-10789877 None:intergenic 35.0%
ACCAGCTGAAAATGATGATA+TGG - chr1_1:10789915-10789934 Msa0007520:CDS 35.0%
CCAGCTGAAAATGATGATAT+GGG - chr1_1:10789916-10789935 Msa0007520:CDS 35.0%
ATGATGATATGGGAATCCTT+TGG - chr1_1:10789926-10789945 Msa0007520:CDS 35.0%
TGATGATATGGGAATCCTTT+GGG - chr1_1:10789927-10789946 Msa0007520:CDS 35.0%
CAAATTGCAACACATCATCT+TGG + chr1_1:10790093-10790112 None:intergenic 35.0%
!! CATGCTTGTTGATTCTTGAA+TGG - chr1_1:10790113-10790132 Msa0007520:CDS 35.0%
TTGATTCTTGAATGGGAGAA+TGG - chr1_1:10790121-10790140 Msa0007520:CDS 35.0%
! TCACAAAACTCATTGGTTGT+TGG + chr1_1:10790167-10790186 None:intergenic 35.0%
CCCTGATTGCTAAATCTATA+AGG - chr1_1:10790300-10790319 Msa0007520:exon 35.0%
GCCTTATAGATTTAGCAATC+AGG + chr1_1:10790304-10790323 None:intergenic 35.0%
ACAGAGACTACGTATAAAAG+TGG + chr1_1:10790400-10790419 None:intergenic 35.0%
! CTTTTATACGTAGTCTCTGT+TGG - chr1_1:10790400-10790419 Msa0007520:intron 35.0%
ATGCAATCACACAATACAGA+GGG + chr1_1:10790544-10790563 None:intergenic 35.0%
TGTCTACTACAAGTCAGTTT+AGG + chr1_1:10790589-10790608 None:intergenic 35.0%
TGTCATTGCTGCAATCAATT+CGG - chr1_1:10790692-10790711 Msa0007520:intron 35.0%
TGACGAAAATACTACACTTG+TGG - chr1_1:10790813-10790832 Msa0007520:intron 35.0%
TGGAGATCAGATTATTGTGA+GGG - chr1_1:10790852-10790871 Msa0007520:intron 35.0%
! CAGCAATATCTCGATTTTCA+TGG + chr1_1:10790888-10790907 None:intergenic 35.0%
CATGAAAATCGAGATATTGC+TGG - chr1_1:10790886-10790905 Msa0007520:intron 35.0%
GACTTCAAATGTTTCATCTC+AGG - chr1_1:10791053-10791072 Msa0007520:intron 35.0%
!!! TGTAGGAACCACTTTTTCAT+CGG - chr1_1:10791079-10791098 Msa0007520:intron 35.0%
AGATGATACCGATGAAAAAG+TGG + chr1_1:10791090-10791109 None:intergenic 35.0%
! AATGAGAAGAAATGGTTTGG+TGG - chr1_1:10791151-10791170 Msa0007520:intron 35.0%
!! ATACCTAGTGTTGGATGTTT+TGG - chr1_1:10791206-10791225 Msa0007520:intron 35.0%
TGTATGGCCAAAATTTCAAG+TGG - chr1_1:10791287-10791306 Msa0007520:five_prime_UTR 35.0%
GACGAACGAATGAATGAGTT+TGG + chr1_1:10781153-10781172 None:intergenic 40.0%
! TCGTCTTCTATCAGAAGTGT+CGG + chr1_1:10781652-10781671 None:intergenic 40.0%
! TGTTGGCATTGAGCAAGTTT+AGG - chr1_1:10781689-10781708 Msa0007520:intron 40.0%
TTCGTGCCCCTCAAAATATA+GGG + chr1_1:10781715-10781734 None:intergenic 40.0%
TACATGGCACTCAAAATCTC+AGG - chr1_1:10781865-10781884 Msa0007520:intron 40.0%
ACATGGCACTCAAAATCTCA+GGG - chr1_1:10781866-10781885 Msa0007520:intron 40.0%
!! CTAAGTAATGGGTGTGGAAA+TGG - chr1_1:10782011-10782030 Msa0007520:intron 40.0%
TATAATACAAGACTCAGCCC+TGG + chr1_1:10782125-10782144 None:intergenic 40.0%
CCGGAACTTCAGAAATATTG+AGG - chr1_1:10782205-10782224 Msa0007520:intron 40.0%
ATTACAAAGCCAGTCTGTTC+AGG - chr1_1:10782364-10782383 Msa0007520:intron 40.0%
ACCAATGCACAGAAGCAATT+CGG + chr1_1:10782415-10782434 None:intergenic 40.0%
!! TCTTGGCTTTGATCCAAACA+CGG - chr1_1:10782498-10782517 Msa0007520:intron 40.0%
! ACAACCGGTGTTAGATCAAT+TGG - chr1_1:10782663-10782682 Msa0007520:CDS 40.0%
! CGTTCTTGCCTTGGAAATTT+TGG + chr1_1:10782842-10782861 None:intergenic 40.0%
TTGAACTATCGTTCTTGCCT+TGG + chr1_1:10782851-10782870 None:intergenic 40.0%
! AAGCCTTATCACACTAAGTG+GGG + chr1_1:10783081-10783100 None:intergenic 40.0%
! CAAGCCTTATCACACTAAGT+GGG + chr1_1:10783082-10783101 None:intergenic 40.0%
GTAGTGAAGAGGCAGTAAAA+GGG + chr1_1:10783155-10783174 None:intergenic 40.0%
TGTAGTGAAGAGGCAGTAAA+AGG + chr1_1:10783156-10783175 None:intergenic 40.0%
GTCGTTTGCATCATCTTTGA+GGG - chr1_1:10783359-10783378 Msa0007520:intron 40.0%
ATGAGTCTGAACAACCAGTA+AGG + chr1_1:10783411-10783430 None:intergenic 40.0%
ACGTAGTGGCTCAACAATAT+TGG - chr1_1:10783488-10783507 Msa0007520:intron 40.0%
AAGGGACACTACAAGATAGA+TGG + chr1_1:10783520-10783539 None:intergenic 40.0%
GTTGGACATGGAAAACATGT+CGG + chr1_1:10783567-10783586 None:intergenic 40.0%
! TGTTTTCCATGTCCAACACA+CGG - chr1_1:10783570-10783589 Msa0007520:intron 40.0%
! TCATTGGTCAGAATTGACTC+TGG - chr1_1:10783616-10783635 Msa0007520:intron 40.0%
GAGCACCTTCATAGTAAAGT+GGG + chr1_1:10783676-10783695 None:intergenic 40.0%
TGAGCACCTTCATAGTAAAG+TGG + chr1_1:10783677-10783696 None:intergenic 40.0%
!! CTCTGAAGCTTCTTCCAAAA+TGG - chr1_1:10783711-10783730 Msa0007520:intron 40.0%
! TGAGTTGGAGTTGAATGTCA+AGG - chr1_1:10783744-10783763 Msa0007520:intron 40.0%
GAGTTGGAGTTGAATGTCAA+GGG - chr1_1:10783745-10783764 Msa0007520:intron 40.0%
CATTAAGCTCTTCAACAGTG+AGG + chr1_1:10783804-10783823 None:intergenic 40.0%
CTCACTGTTGAAGAGCTTAA+TGG - chr1_1:10783802-10783821 Msa0007520:intron 40.0%
CTTCGTACAATACCTTTGGA+AGG + chr1_1:10783939-10783958 None:intergenic 40.0%
!! ACTGACAGTTTTCAGGACTA+CGG + chr1_1:10784162-10784181 None:intergenic 40.0%
TGAACAGTGATACACACACT+GGG + chr1_1:10784246-10784265 None:intergenic 40.0%
TTGAACAGTGATACACACAC+TGG + chr1_1:10784247-10784266 None:intergenic 40.0%
CACGTGTGAAACACAAATCA+AGG + chr1_1:10784318-10784337 None:intergenic 40.0%
!! CTTGATTTGTGTTTCACACG+TGG - chr1_1:10784316-10784335 Msa0007520:intron 40.0%
TCAGCTGTTCTGATACACAA+GGG - chr1_1:10784736-10784755 Msa0007520:intron 40.0%
ACACATCAAGGATGTGAACA+CGG - chr1_1:10784789-10784808 Msa0007520:intron 40.0%
CTGGCAAGTATCAAGATATG+AGG + chr1_1:10785187-10785206 None:intergenic 40.0%
AATTGAGTCGTATCAGTGAG+AGG - chr1_1:10785232-10785251 Msa0007520:intron 40.0%
CTACCCTAGCAAATGATACA+AGG + chr1_1:10785478-10785497 None:intergenic 40.0%
! CTTGTATCATTTGCTAGGGT+AGG - chr1_1:10785476-10785495 Msa0007520:intron 40.0%
! GGAGCACCAAGATCAAAAAA+TGG + chr1_1:10785684-10785703 None:intergenic 40.0%
ATTCTTTGTAACGCAGGCAT+CGG + chr1_1:10785929-10785948 None:intergenic 40.0%
CAGGGTAACAGTTTGGATAT+TGG + chr1_1:10785960-10785979 None:intergenic 40.0%
ATATCCAAACTGTTACCCTG+TGG - chr1_1:10785960-10785979 Msa0007520:intron 40.0%
TATCCAAACTGTTACCCTGT+GGG - chr1_1:10785961-10785980 Msa0007520:intron 40.0%
GCATAAAGTTATTGCCCACA+GGG + chr1_1:10785978-10785997 None:intergenic 40.0%
AGCATAAAGTTATTGCCCAC+AGG + chr1_1:10785979-10785998 None:intergenic 40.0%
TGTTTGGACTGTCTGATTGA+TGG - chr1_1:10786253-10786272 Msa0007520:intron 40.0%
GTTTGGACTGTCTGATTGAT+GGG - chr1_1:10786254-10786273 Msa0007520:intron 40.0%
TTTGGACTGTCTGATTGATG+GGG - chr1_1:10786255-10786274 Msa0007520:intron 40.0%
AGTACTACGTGTCTAGATCA+TGG - chr1_1:10786374-10786393 Msa0007520:intron 40.0%
CATCTTACAAGTTAGGCTTG+TGG - chr1_1:10786990-10787009 Msa0007520:intron 40.0%
TCTTACAAGTTAGGCTTGTG+GGG - chr1_1:10786992-10787011 Msa0007520:intron 40.0%
!! CCATATTAGGTATTGGGGTT+AGG + chr1_1:10787028-10787047 None:intergenic 40.0%
CCTAACCCCAATACCTAATA+TGG - chr1_1:10787025-10787044 Msa0007520:intron 40.0%
! TGGCCCAATAGATTTAGGAT+AGG + chr1_1:10787059-10787078 None:intergenic 40.0%
CTAAATCTATTGGGCCACTT+GGG - chr1_1:10787062-10787081 Msa0007520:intron 40.0%
CACACTTCTTACACTTAGGA+AGG + chr1_1:10787104-10787123 None:intergenic 40.0%
TAAGAAGAGCCAAAAACCCT+CGG + chr1_1:10787484-10787503 None:intergenic 40.0%
!! ATCTGAAGTGTTTTGCATGG+AGG - chr1_1:10787596-10787615 Msa0007520:CDS 40.0%
TATGTGCAATCTAGAGAGAG+GGG + chr1_1:10787771-10787790 None:intergenic 40.0%
TGTCAGAATTCTTCACAGCT+GGG + chr1_1:10787842-10787861 None:intergenic 40.0%
!! ACGTGGTGCTATATTTCCAA+GGG - chr1_1:10788107-10788126 Msa0007520:intron 40.0%
AAGGGAGTCTTCTGTAAGTT+GGG - chr1_1:10788125-10788144 Msa0007520:intron 40.0%
CTTACTTCTGTCCTACTTTG+TGG - chr1_1:10788219-10788238 Msa0007520:intron 40.0%
TGTCCTACTTTGTGGATACT+AGG - chr1_1:10788227-10788246 Msa0007520:intron 40.0%
! GGAAATGTTTCTGCGAAGAA+TGG - chr1_1:10788283-10788302 Msa0007520:intron 40.0%
CAATCTTTGCAGATACTCCT+TGG + chr1_1:10788323-10788342 None:intergenic 40.0%
TGAAGAGATGGCAATATGTG+AGG - chr1_1:10788383-10788402 Msa0007520:intron 40.0%
ATTATTCCCCTTATCCCAGT+TGG + chr1_1:10788418-10788437 None:intergenic 40.0%
GGGAATAATGAAAGTGGGAA+TGG - chr1_1:10788429-10788448 Msa0007520:intron 40.0%
GGCACAAGAAAATCAAGATC+AGG + chr1_1:10788530-10788549 None:intergenic 40.0%
TATGAAGCTAAGGGTCTGTT+TGG - chr1_1:10788761-10788780 Msa0007520:intron 40.0%
GTTATAACTTCCGAAACTGG+TGG - chr1_1:10788897-10788916 Msa0007520:intron 40.0%
! CGCTTTTATTCCACCAGTTT+CGG + chr1_1:10788910-10788929 None:intergenic 40.0%
CGAAACTGGTGGAATAAAAG+CGG - chr1_1:10788908-10788927 Msa0007520:intron 40.0%
ACGACAAAAAAAGCCCTGTT+TGG - chr1_1:10789037-10789056 Msa0007520:intron 40.0%
GTCTTAAAAAAGCTGCTTCC+GGG - chr1_1:10789370-10789389 Msa0007520:intron 40.0%
AAGTTACATATGCACACACC+CGG + chr1_1:10789391-10789410 None:intergenic 40.0%
CAAACCTGCATGTGTTAGAA+GGG + chr1_1:10789671-10789690 None:intergenic 40.0%
ACAAACCTGCATGTGTTAGA+AGG + chr1_1:10789672-10789691 None:intergenic 40.0%
CAGGTTTGTGAAAGTTGCAT+TGG - chr1_1:10789683-10789702 Msa0007520:CDS 40.0%
TGTAATTCTTGTACGCGGAA+AGG - chr1_1:10789763-10789782 Msa0007520:CDS 40.0%
AAGCCTCCAAGATTGATCTA+GGG + chr1_1:10789793-10789812 None:intergenic 40.0%
ATCAATCTTGGAGGCTTCAA+AGG - chr1_1:10789796-10789815 Msa0007520:CDS 40.0%
TCAATCTTGGAGGCTTCAAA+GGG - chr1_1:10789797-10789816 Msa0007520:CDS 40.0%
CGCTCCAGGAAGATTAAAAA+TGG - chr1_1:10789851-10789870 Msa0007520:CDS 40.0%
! CCCATATCATCATTTTCAGC+TGG + chr1_1:10789919-10789938 None:intergenic 40.0%
GATGATATGGGAATCCTTTG+GGG - chr1_1:10789928-10789947 Msa0007520:CDS 40.0%
! TGGATTGTCTAAAGCAGTAG+AGG + chr1_1:10790147-10790166 None:intergenic 40.0%
CATGCAATCACACAATACAG+AGG + chr1_1:10790545-10790564 None:intergenic 40.0%
GCAATGACAAACTAGTACGT+GGG + chr1_1:10790681-10790700 None:intergenic 40.0%
AGCAATGACAAACTAGTACG+TGG + chr1_1:10790682-10790701 None:intergenic 40.0%
TCCATATCTGGTAATTGCTC+AGG - chr1_1:10790738-10790757 Msa0007520:intron 40.0%
ACCTGAGCAATTACCAGATA+TGG + chr1_1:10790742-10790761 None:intergenic 40.0%
GTGGACGTTAACATATTTGC+TGG - chr1_1:10790832-10790851 Msa0007520:intron 40.0%
CTGGAGATCAGATTATTGTG+AGG - chr1_1:10790851-10790870 Msa0007520:intron 40.0%
TGAGCTGTGTAACGAGAAAA+AGG - chr1_1:10790990-10791009 Msa0007520:intron 40.0%
! TGTTTCATCTCAGGTTGTGT+AGG - chr1_1:10791062-10791081 Msa0007520:intron 40.0%
AGACCAAAACATCCAACACT+AGG + chr1_1:10791212-10791231 None:intergenic 40.0%
! GCCCTAGTAATGGCAAATTT+TGG - chr1_1:10791236-10791255 Msa0007520:intron 40.0%
TCGTCTTTCCTTCTTCTCTC+TGG - chr1_1:10781198-10781217 Msa0007520:three_prime_UTR 45.0%
CGACATTACCAGAGAGAAGA+AGG + chr1_1:10781209-10781228 None:intergenic 45.0%
CTTCGTGCCCCTCAAAATAT+AGG + chr1_1:10781716-10781735 None:intergenic 45.0%
! TTGTTGGACTCTGCTTGTTG+AGG - chr1_1:10781736-10781755 Msa0007520:intron 45.0%
GTATCATCATCCCCTTGTCT+CGG + chr1_1:10782186-10782205 None:intergenic 45.0%
AGACAAGGGGATGATGATAC+CGG - chr1_1:10782186-10782205 Msa0007520:intron 45.0%
TCCGAATTGCTTCTGTGCAT+TGG - chr1_1:10782411-10782430 Msa0007520:intron 45.0%
GATTCACGAAGTTCCGTGTT+TGG + chr1_1:10782514-10782533 None:intergenic 45.0%
TCCAAGATTTGTGAGTCCTG+CGG + chr1_1:10782548-10782567 None:intergenic 45.0%
CGAGCCAATTGATCTAACAC+CGG + chr1_1:10782670-10782689 None:intergenic 45.0%
! CGGTGTTAGATCAATTGGCT+CGG - chr1_1:10782668-10782687 Msa0007520:CDS 45.0%
GAAGCAATGTCAGGAACTCA+TGG + chr1_1:10782789-10782808 None:intergenic 45.0%
GCAATGACAGAAGCAATGTC+AGG + chr1_1:10782798-10782817 None:intergenic 45.0%
AATCTCTGTCTTTGTGGGGA+TGG - chr1_1:10782976-10782995 Msa0007520:intron 45.0%
ATCTCTGTCTTTGTGGGGAT+GGG - chr1_1:10782977-10782996 Msa0007520:intron 45.0%
CTTATCACACTAAGTGGGGT+TGG + chr1_1:10783077-10783096 None:intergenic 45.0%
CAACCCCACTTAGTGTGATA+AGG - chr1_1:10783075-10783094 Msa0007520:intron 45.0%
! CCAAGCCTTATCACACTAAG+TGG + chr1_1:10783083-10783102 None:intergenic 45.0%
CCACTTAGTGTGATAAGGCT+TGG - chr1_1:10783080-10783099 Msa0007520:intron 45.0%
GGTCGTTTGCATCATCTTTG+AGG - chr1_1:10783358-10783377 Msa0007520:intron 45.0%
! TTTGCATCATCTTTGAGGGC+TGG - chr1_1:10783363-10783382 Msa0007520:intron 45.0%
GAAAACATGTCGGACACTTC+GGG + chr1_1:10783557-10783576 None:intergenic 45.0%
GGAAAACATGTCGGACACTT+CGG + chr1_1:10783558-10783577 None:intergenic 45.0%
TTCAAGAAAAGGCCGTGTGT+TGG + chr1_1:10783585-10783604 None:intergenic 45.0%
!! CTATGAAGGTGCTCACAATG+TGG - chr1_1:10783682-10783701 Msa0007520:intron 45.0%
TACGGTACACATCCACAAAG+AGG + chr1_1:10784144-10784163 None:intergenic 45.0%
AGTTCAGCGGGGAATGAAAA+TGG + chr1_1:10784661-10784680 None:intergenic 45.0%
TGGTGCATACTAAGTTCAGC+GGG + chr1_1:10784673-10784692 None:intergenic 45.0%
GTGGTGCATACTAAGTTCAG+CGG + chr1_1:10784674-10784693 None:intergenic 45.0%
GTCAGCTGTTCTGATACACA+AGG - chr1_1:10784735-10784754 Msa0007520:intron 45.0%
AAGGGAACTGCAGCTAATAG+TGG - chr1_1:10784754-10784773 Msa0007520:intron 45.0%
CACATCAAGGATGTGAACAC+GGG - chr1_1:10784790-10784809 Msa0007520:intron 45.0%
ACATCAAGGATGTGAACACG+GGG - chr1_1:10784791-10784810 Msa0007520:intron 45.0%
! GTAGCTGACAGTAATGGAAG+TGG - chr1_1:10784943-10784962 Msa0007520:CDS 45.0%
! TTTTAGTGAGAACGGGGGAA+TGG - chr1_1:10785059-10785078 Msa0007520:CDS 45.0%
CTTTCCTATGGTTGTACTGC+TGG + chr1_1:10785206-10785225 None:intergenic 45.0%
GCAGTACAACCATAGGAAAG+AGG - chr1_1:10785206-10785225 Msa0007520:intron 45.0%
TGAAGCTCCTGTTAAACCAC+TGG - chr1_1:10785281-10785300 Msa0007520:intron 45.0%
CAAAAATACGGTTGCTCCAG+TGG + chr1_1:10785300-10785319 None:intergenic 45.0%
! CACTGGAGCAACCGTATTTT+TGG - chr1_1:10785298-10785317 Msa0007520:intron 45.0%
!! ATAGTGACTGGCTTCGTCAA+TGG - chr1_1:10785325-10785344 Msa0007520:intron 45.0%
!! TAGTGACTGGCTTCGTCAAT+GGG - chr1_1:10785326-10785345 Msa0007520:intron 45.0%
GGGCTGAAAATGTTACTCCA+AGG - chr1_1:10785346-10785365 Msa0007520:intron 45.0%
GGACTTTACCGTGTGAACAT+TGG + chr1_1:10785571-10785590 None:intergenic 45.0%
TCGAGGTAACCTTTGACACT+GGG + chr1_1:10785592-10785611 None:intergenic 45.0%
!! AGCGACTGTCTTCTAAAGCA+TGG - chr1_1:10785615-10785634 Msa0007520:intron 45.0%
!! GCGACTGTCTTCTAAAGCAT+GGG - chr1_1:10785616-10785635 Msa0007520:intron 45.0%
!! ATTGGTAATGGGGCTTGAGA+AGG - chr1_1:10785746-10785765 Msa0007520:intron 45.0%
!! TTGGTAATGGGGCTTGAGAA+GGG - chr1_1:10785747-10785766 Msa0007520:intron 45.0%
! GAGCATTGTGAGATGGCAAA+GGG - chr1_1:10785867-10785886 Msa0007520:intron 45.0%
ATTGTGAGATGGCAAAGGGT+AGG - chr1_1:10785871-10785890 Msa0007520:intron 45.0%
TTGTGAGATGGCAAAGGGTA+GGG - chr1_1:10785872-10785891 Msa0007520:intron 45.0%
TTCTTTGTAACGCAGGCATC+GGG + chr1_1:10785928-10785947 None:intergenic 45.0%
! TTTGGGTTTGTGCTGATGTG+AGG - chr1_1:10786010-10786029 Msa0007520:CDS 45.0%
TCGTGTCAGCAGACACTTAT+CGG - chr1_1:10786287-10786306 Msa0007520:intron 45.0%
CTTGCACGGGATATTCTTGA+TGG - chr1_1:10786334-10786353 Msa0007520:intron 45.0%
ACTGTGTTCCAACAGTCAAC+TGG - chr1_1:10786748-10786767 Msa0007520:intron 45.0%
CATTGGATAGTGATATGGCC+TGG - chr1_1:10786949-10786968 Msa0007520:intron 45.0%
TAGTGATATGGCCTGGATAG+TGG - chr1_1:10786956-10786975 Msa0007520:intron 45.0%
AGAGATGACAACCACTATCC+AGG + chr1_1:10786970-10786989 None:intergenic 45.0%
CCAAGTGGCCCAATAGATTT+AGG + chr1_1:10787064-10787083 None:intergenic 45.0%
CCTAAATCTATTGGGCCACT+TGG - chr1_1:10787061-10787080 Msa0007520:intron 45.0%
!! TACACTTAGGAAGGAGCATC+TGG + chr1_1:10787095-10787114 None:intergenic 45.0%
GTGTGTTGAGAGTCTGACAT+TGG - chr1_1:10787119-10787138 Msa0007520:CDS 45.0%
! ACTTTTGTAGGTTGCAGCAG+TGG - chr1_1:10787337-10787356 Msa0007520:CDS 45.0%
ATCAGCTTCAGATGGAGCAT+CGG + chr1_1:10787379-10787398 None:intergenic 45.0%
GGACAACTAATAGCTGCTGT+TGG + chr1_1:10787408-10787427 None:intergenic 45.0%
GCAGCTATTAGTTGTCCACA+TGG - chr1_1:10787411-10787430 Msa0007520:CDS 45.0%
TCAGGCATAAGTTGTCCATG+TGG + chr1_1:10787429-10787448 None:intergenic 45.0%
AAGAAGAGCCAAAAACCCTC+GGG + chr1_1:10787483-10787502 None:intergenic 45.0%
! ACTGCATTCAGAGCACTCTT+TGG + chr1_1:10787568-10787587 None:intergenic 45.0%
TTTGCATGGAGGACTCTATG+AGG - chr1_1:10787607-10787626 Msa0007520:CDS 45.0%
GTGTCAGAATTCTTCACAGC+TGG + chr1_1:10787843-10787862 None:intergenic 45.0%
!! TCGTGAGTGCTGAGAAACAA+GGG + chr1_1:10788055-10788074 None:intergenic 45.0%
AGCACTCACGACTCATTGAA+AGG - chr1_1:10788064-10788083 Msa0007520:intron 45.0%
!! GACGTGGTGCTATATTTCCA+AGG - chr1_1:10788106-10788125 Msa0007520:intron 45.0%
CAACTTACAGAAGACTCCCT+TGG + chr1_1:10788126-10788145 None:intergenic 45.0%
CAAGGGAGTCTTCTGTAAGT+TGG - chr1_1:10788124-10788143 Msa0007520:intron 45.0%
AGGGAGTCTTCTGTAAGTTG+GGG - chr1_1:10788126-10788145 Msa0007520:intron 45.0%
CTGCCTAGTATCCACAAAGT+AGG + chr1_1:10788233-10788252 None:intergenic 45.0%
CTACTTTGTGGATACTAGGC+AGG - chr1_1:10788231-10788250 Msa0007520:intron 45.0%
AGCTGGATCTTGTGAAGAGA+TGG - chr1_1:10788371-10788390 Msa0007520:intron 45.0%
TTCGATCAAGACTTGTCCTG+AGG - chr1_1:10788458-10788477 Msa0007520:intron 45.0%
AACTGGTGGAATAAAAGCGG+TGG - chr1_1:10788911-10788930 Msa0007520:intron 45.0%
GGGTGTGTGCATATGTAACT+TGG - chr1_1:10789390-10789409 Msa0007520:intron 45.0%
TTTGCCCTTCTAACACATGC+AGG - chr1_1:10789664-10789683 Msa0007520:CDS 45.0%
AATTCTTGTACGCGGAAAGG+AGG - chr1_1:10789766-10789785 Msa0007520:CDS 45.0%
GAAGCCTCCAAGATTGATCT+AGG + chr1_1:10789794-10789813 None:intergenic 45.0%
ACAAACTTGGCTTACCCCAA+AGG + chr1_1:10789945-10789964 None:intergenic 45.0%
! GTTGGCTGGCTAACTTTATG+TGG - chr1_1:10789995-10790014 Msa0007520:CDS 45.0%
GCAATCAGGGGCTTAAAGAT+GGG + chr1_1:10790290-10790309 None:intergenic 45.0%
AGCAATCAGGGGCTTAAAGA+TGG + chr1_1:10790291-10790310 None:intergenic 45.0%
TTAAAGGGCAGATTGTAGGG+TGG - chr1_1:10790373-10790392 Msa0007520:intron 45.0%
GGAGAGAGAGCAATCCAATA+TGG + chr1_1:10790482-10790501 None:intergenic 45.0%
CAATCACACAATACAGAGGG+AGG + chr1_1:10790541-10790560 None:intergenic 45.0%
ACCATGTAAATCCTTGTGCC+TGG - chr1_1:10791180-10791199 Msa0007520:intron 45.0%
CCATGTAAATCCTTGTGCCT+GGG - chr1_1:10791181-10791200 Msa0007520:intron 45.0%
CATGTAAATCCTTGTGCCTG+GGG - chr1_1:10791182-10791201 Msa0007520:intron 45.0%
!! TGGTCTTGTTGCCCTAGTAA+TGG - chr1_1:10791226-10791245 Msa0007520:intron 45.0%
GTCCTGTGTTCGACACTTGT+TGG - chr1_1:10781672-10781691 Msa0007520:CDS 50.0%
!! TGCCAACAAGTGTCGAACAC+AGG + chr1_1:10781677-10781696 None:intergenic 50.0%
! TTTGAGGGGCACGAAGTTGT+TGG - chr1_1:10781720-10781739 Msa0007520:intron 50.0%
AAGCACGATCTCACAATCGC+AGG + chr1_1:10781809-10781828 None:intergenic 50.0%
GGCACTCAAAATCTCAGGGA+CGG - chr1_1:10781870-10781889 Msa0007520:intron 50.0%
CAATGAGCAGATCAACGGCT+CGG - chr1_1:10782145-10782164 Msa0007520:intron 50.0%
AATGAGCAGATCAACGGCTC+GGG - chr1_1:10782146-10782165 Msa0007520:intron 50.0%
ACACGACAACCTGAACAGAC+TGG + chr1_1:10782376-10782395 None:intergenic 50.0%
GAATCTGCTAATTCACCCGC+AGG - chr1_1:10782529-10782548 Msa0007520:CDS 50.0%
CCAAGATTTGTGAGTCCTGC+GGG + chr1_1:10782547-10782566 None:intergenic 50.0%
TCACATGAGACACACTTCCC+CGG + chr1_1:10782882-10782901 None:intergenic 50.0%
TCTCTGTCTTTGTGGGGATG+GGG - chr1_1:10782978-10782997 Msa0007520:intron 50.0%
! ACTAAGTGGGGTTGGCAACA+TGG + chr1_1:10783069-10783088 None:intergenic 50.0%
!! AAGAAGCACAGGCACTGACA+TGG - chr1_1:10783454-10783473 Msa0007520:intron 50.0%
! CGGGTTAGACACAGCACAAA+GGG + chr1_1:10783538-10783557 None:intergenic 50.0%
! TCGGGTTAGACACAGCACAA+AGG + chr1_1:10783539-10783558 None:intergenic 50.0%
AAAAGGCCGTGTGTTGGACA+TGG + chr1_1:10783579-10783598 None:intergenic 50.0%
GCGCTATGTCTTCCTTCCAA+AGG - chr1_1:10783924-10783943 Msa0007520:intron 50.0%
AACTCGTGATCGCTACAAGC+AGG + chr1_1:10784468-10784487 None:intergenic 50.0%
!! TCTTTGCTGTTGTCTGCCAG+AGG + chr1_1:10784624-10784643 None:intergenic 50.0%
GGTGCATACTAAGTTCAGCG+GGG + chr1_1:10784672-10784691 None:intergenic 50.0%
GCAAGGGTAGCTGACAGTAA+TGG - chr1_1:10784937-10784956 Msa0007520:CDS 50.0%
CTTGCCAGCAGTACAACCAT+AGG - chr1_1:10785199-10785218 Msa0007520:intron 50.0%
GGTTGCTCCAGTGGTTTAAC+AGG + chr1_1:10785291-10785310 None:intergenic 50.0%
TCTTTCCTTGCCTTAGCTCG+AGG - chr1_1:10785446-10785465 Msa0007520:intron 50.0%
AAGGAATGTGCCTCGAGCTA+AGG + chr1_1:10785459-10785478 None:intergenic 50.0%
CGGTAAAGTCCCAGTGTCAA+AGG - chr1_1:10785580-10785599 Msa0007520:intron 50.0%
GTCGAGGTAACCTTTGACAC+TGG + chr1_1:10785593-10785612 None:intergenic 50.0%
! AGAAGACAGTCGCTTTGTCG+AGG + chr1_1:10785609-10785628 None:intergenic 50.0%
GGGCTTGAGAAGGGATAGAT+TGG - chr1_1:10785756-10785775 Msa0007520:intron 50.0%
!! GAGTGAGGAGCATTGTGAGA+TGG - chr1_1:10785860-10785879 Msa0007520:intron 50.0%
!! GGAGCATTGTGAGATGGCAA+AGG - chr1_1:10785866-10785885 Msa0007520:intron 50.0%
AAAGGGTAGGGTCTGAGTAG+AGG - chr1_1:10785884-10785903 Msa0007520:intron 50.0%
AAGGGTAGGGTCTGAGTAGA+GGG - chr1_1:10785885-10785904 Msa0007520:intron 50.0%
TTGCCCACAGGGTAACAGTT+TGG + chr1_1:10785967-10785986 None:intergenic 50.0%
! CAGTCCTCGTGAGAAAGTGT+TGG + chr1_1:10786232-10786251 None:intergenic 50.0%
TTCTCACGAGGACTGCTGTT+TGG - chr1_1:10786237-10786256 Msa0007520:intron 50.0%
ACTGTCTGATTGATGGGGCT+CGG - chr1_1:10786260-10786279 Msa0007520:intron 50.0%
CGTGTCAGCAGACACTTATC+GGG - chr1_1:10786288-10786307 Msa0007520:intron 50.0%
AGCTAGTGAGGGGCTTACAT+TGG - chr1_1:10786932-10786951 Msa0007520:intron 50.0%
TTTGTAGGTTGCAGCAGTGG+TGG - chr1_1:10787340-10787359 Msa0007520:CDS 50.0%
! GCTCCATCTGAAGCTGATTC+TGG - chr1_1:10787381-10787400 Msa0007520:CDS 50.0%
GGTCCAGAATCAGCTTCAGA+TGG + chr1_1:10787387-10787406 None:intergenic 50.0%
CTTATGCCTGAGCAAGCAAC+TGG - chr1_1:10787438-10787457 Msa0007520:CDS 50.0%
TTAGCACCAGTTGCTTGCTC+AGG + chr1_1:10787447-10787466 None:intergenic 50.0%
! AGCAAGCAACTGGTGCTAAG+CGG - chr1_1:10787448-10787467 Msa0007520:CDS 50.0%
! TGCTTGTTCCCGAGGGTTTT+TGG - chr1_1:10787472-10787491 Msa0007520:CDS 50.0%
TGGTGCACTGCTCTGTGAAA+AGG - chr1_1:10787887-10787906 Msa0007520:intron 50.0%
!! GTCGTGAGTGCTGAGAAACA+AGG + chr1_1:10788056-10788075 None:intergenic 50.0%
CGTCTGAGAATCAGTTCAGG+AGG + chr1_1:10788090-10788109 None:intergenic 50.0%
CCACGTCTGAGAATCAGTTC+AGG + chr1_1:10788093-10788112 None:intergenic 50.0%
! CCTGAACTGATTCTCAGACG+TGG - chr1_1:10788090-10788109 Msa0007520:intron 50.0%
! GGGAGTCTTCTGTAAGTTGG+GGG - chr1_1:10788127-10788146 Msa0007520:intron 50.0%
CTTTGTGGATACTAGGCAGG+TGG - chr1_1:10788234-10788253 Msa0007520:intron 50.0%
!! GATTCGGTGAATGCTACAGC+TGG - chr1_1:10788354-10788373 Msa0007520:intron 50.0%
GGCAATATGTGAGGACCAGT+TGG - chr1_1:10788392-10788411 Msa0007520:intron 50.0%
CAGTTGGCCAACTGGGATAA+GGG - chr1_1:10788408-10788427 Msa0007520:intron 50.0%
AGTTGGCCAACTGGGATAAG+GGG - chr1_1:10788409-10788428 Msa0007520:intron 50.0%
GGCACTGCTATACAGTGCAA+AGG - chr1_1:10788828-10788847 Msa0007520:intron 50.0%
CGGTGGTTGTGCTGTAAGTT+TGG - chr1_1:10788928-10788947 Msa0007520:intron 50.0%
GGAGGTCCCTAGATCAATCT+TGG - chr1_1:10789784-10789803 Msa0007520:CDS 50.0%
GGTCCCTAGATCAATCTTGG+AGG - chr1_1:10789787-10789806 Msa0007520:CDS 50.0%
GTGCAGGTAGCAATGTGAAC+AGG + chr1_1:10790503-10790522 None:intergenic 50.0%
TCACACAATACAGAGGGAGG+AGG + chr1_1:10790538-10790557 None:intergenic 50.0%
AAAGGATACACAGCGTACCG+AGG - chr1_1:10791008-10791027 Msa0007520:intron 50.0%
AAGGATACACAGCGTACCGA+GGG - chr1_1:10791009-10791028 Msa0007520:intron 50.0%
CCCAGGCACAAGGATTTACA+TGG + chr1_1:10791184-10791203 None:intergenic 50.0%
!! GTCGGTGTCAGTGTCATGTC+AGG - chr1_1:10781901-10781920 Msa0007520:intron 55.0%
ATGAGCAGATCAACGGCTCG+GGG - chr1_1:10782147-10782166 Msa0007520:intron 55.0%
GAACGCGGAAGTCTGGCATA+TGG - chr1_1:10782449-10782468 Msa0007520:intron 55.0%
CCCGCAGGACTCACAAATCT+TGG - chr1_1:10782544-10782563 Msa0007520:CDS 55.0%
!! TGGCATTGACGCACACGTAG+TGG - chr1_1:10783474-10783493 Msa0007520:intron 55.0%
GAGAGGGCTCAGACAATCTG+TGG + chr1_1:10784693-10784712 None:intergenic 55.0%
AGGATGTGAACACGGGGCAA+TGG - chr1_1:10784797-10784816 Msa0007520:intron 55.0%
ATGTGAACACGGGGCAATGG+TGG - chr1_1:10784800-10784819 Msa0007520:intron 55.0%
TGTGAACACGGGGCAATGGT+GGG - chr1_1:10784801-10784820 Msa0007520:intron 55.0%
ATGTGCCTCGAGCTAAGGCA+AGG + chr1_1:10785454-10785473 None:intergenic 55.0%
AGGGCCAACACTTTCTCACG+AGG - chr1_1:10786225-10786244 Msa0007520:intron 55.0%
! GCAAGCAACTGGTGCTAAGC+GGG - chr1_1:10787449-10787468 Msa0007520:CDS 55.0%
!! TGGGGTGCTACTGAAACCCA+AGG - chr1_1:10788303-10788322 Msa0007520:intron 55.0%
TGAGGACCAGTTGGCCAACT+GGG - chr1_1:10788401-10788420 Msa0007520:intron 55.0%
CCTTATCCCAGTTGGCCAAC+TGG + chr1_1:10788410-10788429 None:intergenic 55.0%
CCAGTTGGCCAACTGGGATA+AGG - chr1_1:10788407-10788426 Msa0007520:intron 55.0%
TGTGGGTGAACAGAAGGGAG+TGG + chr1_1:10789506-10789525 None:intergenic 55.0%
! GACGGGTTTCTAAACGCTCC+AGG - chr1_1:10789837-10789856 Msa0007520:CDS 55.0%
ATACAGAGGGAGGAGGATCC+AGG + chr1_1:10790531-10790550 None:intergenic 55.0%
ATACACAGCGTACCGAGGGA+GGG - chr1_1:10791013-10791032 Msa0007520:intron 55.0%
TGTTCCACGAAACCCTCCCT+CGG + chr1_1:10791028-10791047 None:intergenic 55.0%
TCCAACACTAGGTATGCCCC+AGG + chr1_1:10791201-10791220 None:intergenic 55.0%
TCAGGGACGGATCTGCGTGT+CGG - chr1_1:10781883-10781902 Msa0007520:intron 60.0%
!! GCATTGGTTCCGCCTCCAAG+TGG - chr1_1:10782427-10782446 Msa0007520:intron 60.0%
TTCCGCCTCCAAGTGGAACG+CGG - chr1_1:10782434-10782453 Msa0007520:intron 60.0%
TTCCGCGTTCCACTTGGAGG+CGG + chr1_1:10782439-10782458 None:intergenic 60.0%
GACTTCCGCGTTCCACTTGG+AGG + chr1_1:10782442-10782461 None:intergenic 60.0%
CCAGACTTCCGCGTTCCACT+TGG + chr1_1:10782445-10782464 None:intergenic 60.0%
CCAAGTGGAACGCGGAAGTC+TGG - chr1_1:10782442-10782461 Msa0007520:intron 60.0%
!! CAAGGGCGCCCAACAAACAG+AGG + chr1_1:10783260-10783279 None:intergenic 60.0%
! CATCTGGAGCACGACCCAAG+TGG + chr1_1:10787079-10787098 None:intergenic 60.0%
TAAGCGGGTGCTTGTTCCCG+AGG - chr1_1:10787464-10787483 Msa0007520:CDS 60.0%
AAGCGGGTGCTTGTTCCCGA+GGG - chr1_1:10787465-10787484 Msa0007520:CDS 60.0%
GTGAGGACCAGTTGGCCAAC+TGG - chr1_1:10788400-10788419 Msa0007520:intron 60.0%
TTGCTACCTGCACAGCTGCC+TGG - chr1_1:10790510-10790529 Msa0007520:intron 60.0%
GATACACAGCGTACCGAGGG+AGG - chr1_1:10791012-10791031 Msa0007520:intron 60.0%
CTAGGTATGCCCCAGGCACA+AGG + chr1_1:10791194-10791213 None:intergenic 60.0%
GCCTGGGGCATACCTAGTGT+TGG - chr1_1:10791197-10791216 Msa0007520:intron 60.0%
GAGGATCCAGGCAGCTGTGC+AGG + chr1_1:10790519-10790538 None:intergenic 65.0%
CGTACCGAGGGAGGGTTTCG+TGG - chr1_1:10791021-10791040 Msa0007520:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 10781150 10791310 10781150 ID=Msa0007520;Name=Msa0007520
chr1_1 mRNA 10781150 10791310 10781150 ID=Msa0007520-mRNA-1;Parent=Msa0007520;Name=Msa0007520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=91|0.92|0.92|1|0.92|0.85|14|227|1105
chr1_1 exon 10781150 10781471 10781150 ID=Msa0007520-mRNA-1:exon:4011;Parent=Msa0007520-mRNA-1
chr1_1 exon 10781553 10781700 10781553 ID=Msa0007520-mRNA-1:exon:4010;Parent=Msa0007520-mRNA-1
chr1_1 exon 10782511 10782774 10782511 ID=Msa0007520-mRNA-1:exon:4009;Parent=Msa0007520-mRNA-1
chr1_1 exon 10783981 10784211 10783981 ID=Msa0007520-mRNA-1:exon:4008;Parent=Msa0007520-mRNA-1
chr1_1 exon 10784323 10784394 10784323 ID=Msa0007520-mRNA-1:exon:4007;Parent=Msa0007520-mRNA-1
chr1_1 exon 10784552 10784750 10784552 ID=Msa0007520-mRNA-1:exon:4006;Parent=Msa0007520-mRNA-1
chr1_1 exon 10784832 10785113 10784832 ID=Msa0007520-mRNA-1:exon:4005;Parent=Msa0007520-mRNA-1
chr1_1 exon 10785996 10786243 10785996 ID=Msa0007520-mRNA-1:exon:4004;Parent=Msa0007520-mRNA-1
chr1_1 exon 10786805 10786913 10786805 ID=Msa0007520-mRNA-1:exon:4003;Parent=Msa0007520-mRNA-1
chr1_1 exon 10787093 10787829 10787093 ID=Msa0007520-mRNA-1:exon:4002;Parent=Msa0007520-mRNA-1
chr1_1 exon 10788515 10788770 10788515 ID=Msa0007520-mRNA-1:exon:4001;Parent=Msa0007520-mRNA-1
chr1_1 exon 10789555 10790151 10789555 ID=Msa0007520-mRNA-1:exon:4000;Parent=Msa0007520-mRNA-1
chr1_1 exon 10790234 10790334 10790234 ID=Msa0007520-mRNA-1:exon:3999;Parent=Msa0007520-mRNA-1
chr1_1 exon 10791241 10791310 10791241 ID=Msa0007520-mRNA-1:exon:3998;Parent=Msa0007520-mRNA-1
chr1_1 five_prime_UTR 10791241 10791310 10791241 ID=Msa0007520-mRNA-1:five_prime_utr;Parent=Msa0007520-mRNA-1
chr1_1 five_prime_UTR 10790314 10790334 10790314 ID=Msa0007520-mRNA-1:five_prime_utr;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10790234 10790313 10790234 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10789555 10790151 10789555 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10788515 10788770 10788515 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10787093 10787829 10787093 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10786805 10786913 10786805 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10785996 10786243 10785996 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10784832 10785113 10784832 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10784552 10784750 10784552 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10784323 10784394 10784323 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10783981 10784211 10783981 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10782511 10782774 10782511 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10781553 10781700 10781553 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 CDS 10781377 10781471 10781377 ID=Msa0007520-mRNA-1:cds;Parent=Msa0007520-mRNA-1
chr1_1 three_prime_UTR 10781150 10781376 10781150 ID=Msa0007520-mRNA-1:three_prime_utr;Parent=Msa0007520-mRNA-1
Gene Sequence

>Msa0007520

ATGAGCAGATCAACGGCTCGGGGTAAAAATAAAAGACCGAGACAAGGGGATGATGATACCGGAACTTCAGAAATATTGAGGAAAATATACAAAACAGGCGTAGCAACTGATGATGATATGAGCAAACTGTATATGATTACAAAGCCAGTCTGTTCAGGTTGTCGTGTTAATACTAAAGACAATCCGAATTGCTTCTGTGCATTGGTTCCGCCTCCAAGTGGAACGCGGAAGTCTGGCATATGGCAGAAGATATCTGATTTTGTTGATAGTCTTGGCTTTGATCCAAACACGGAACTTCGTGAATCTGCTAATTCACCCGCAGGACTCACAAATCTTGGAGCAACGTGTTATGCTAACAGCATACTCCAATGCTTGTATATGAATAAACGTTTTCGAGAAGGATTATTTTCTGTTGAACCAGATATTTTTCAGCAACAACCGGTGTTAGATCAATTGGCTCGGCTTTTTGCACAGTTGCATTTAAGTAAAAAGGCTTTCATAGATTCTTCTCCATTTGTAAAAACGTTGGAGTTGGACAATGAAGTTCAGCAAGATAGCCATGAGTTCCTGACATTGCTTCTGTCATTGCTAGAGCGCTGCCTTAGTCGTTCCAAAATTTCCAAGGCAAGAACGATAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTGACAACGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAAGACTTCTATGAGTTGGAGTTGAATGTCAAGGGATTGAAAAGTTTAGACGAGAGCTTAGATGATTACCTCACTGTTGAAGAGCTTAATGGAGACAATCAATATTTTTGTGAGTCATGTAAAACAAGGGTTGATGCTACTCGCAGCATCAAGCTGCGAACATTACCTGATGTGCTTAATTTTCAGCTTAAGCGCTATGTCTTCCTTCCAAAGACAACAGCAAAGAAGAAAGTTACTTCTCCATTTTCATTCCCCGCTGAACTTAGTATGCACCACAGATTGTCTGAGCCCTCTCAGTCTGAATTGATATATGACTTGTCAGCTGTTCTGATACACAAGGGAACTGCAGCTAATAGTGGTCATTACATAGCACACATCAAGGATGTGAACACGGGGCAATGGTGGGAATTTGATGATGAGCTTGTTACTAACTTGGGCCGTTGTCCATTTTCAGAAGAAGCTTCATGCTCTGCTTCTAAATCTGTTAAGAATGATCTGGATCATTCTAATTTCTCTGAAGCAAGGGTAGCTGACAGTAATGGAAGTGGTTCAAATGTAAAAGTTTCACAATCTTTACCCATGGAGACATTTTCATCTAGTGATGCATATATGTTGATGTACCATCTTAAGCATACCAAATTTTTTAGTGAGAACGGGGGAATGGAAACTAGTGCTAATCATACTGAAACAGTTGATGTTCCAATTACTGCACAAGATAATGATTGTCTTCCTTCTCATTTTTGTGAAGAGATTCAAAATTTCAATGCCTCATATCTTGATACTTGCCAGCAGTACAACCATAGGAAAGAGGTAGAATTGAGTCGTATCAGTGAGAGGAGAGAAGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTTAAACCACTGGAGCAACCGTATTTTTGGATTTATAGTGACTGGCTTCGTCAATGGGCTGAAAATGTTACTCCAAGTGCTATTGACAACACATCTATCCAATGTTCACACGGTAAAGTCCCAGTGTCAAAGGTTACCTCGACAAAGCGACTGTCTTCTAAAGCATGGGATAAGTTACTGTCTAAGTATGGTGGAGGGCCAACACTTTCTCACGAGGACTGCTGTTTGGACTGTCTGATTGATGGGGCTCGGAATGTCGTGTCAGCAGACACTTATCGGGATCAAAGAGAATCATTTAAGCAACTTGCACGGGATATTCTTGATGGAAAAAACGTAGATGGAAAGTACTACGTGTCTAGATCATGGTATGATTGCAAATCTTTTCTCTTGTCGTTTCTGTTTCTTCAGAAAGGAATAAGGGGTGATGGAGATAAGTTGCAGCAGTGGTGGAAAAGAAAAGTTGCCGATGCTCCATCTGAAGCTGATTCTGGACCAACAGCAGCTATTAGTTGTCCACATGGACAACTTATGCCTGAGCAAGCAACTGGTGCTAAGCGGGTGCTTGTTCCCGAGGGTTTTTGGCTCTTCTTATATGAAGATGCCACTTCTGTGAAAAATGATCTTCTGGTCTGCCCTACATTTCATTTAGACTCCAAAGAGTGCTCTGAATGCAGTAGCGAATTATCTGAAGTGTTTTGCATGGAGGACTCTATGAGGTTATTAAAACAAAGGCAGCGTCAGAGTCATGAGAAGTTGTTCAATGGGAAAAGTATGCCCCTCTCTCTAGATTGCACATATTTCTTAGTTCCTTCCTCTTGGATTTCAAAATGGAGAACGTATATCAACCCAGCTGTGAAGAATTCTGACACACCTGAAACATTAAATGTGGTGATTGGTGCACTGCTCTGTGAAAAGCACTCACGACTCATTGAAAGGCCTCCTGAACTGATTCTCAGACGTGGTGCTATATTTCCAAGGGAGTCTTCTGCAGGTGGCTTAACCATCATATCTGAGAATGATTGGAAATGTTTCTGCGAAGAATGGGGTGCTACTGAAACCCAAGGAGTATCTGCAAAGATTGAGAAAATTAATGATTCGGTGAATGCTACAGCTGGATCTTGTGAAGAGATGGCAATATGTGAGGACCAGTTGGCCAACTGGGATAAGGGGAATAATGAAAGTGGGAATGGTCAATTTTCGATCAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATTGGAGAAAAGGAAAGCTGTGAGTTAGTGCATAAACTTAATTATTCCAATGAGGATATATGTGTAATTCTTGTACGCGGAAAGGAGGTCCCTAGATCAATCTTGGAGGCTTCAAAGGGATTTGTTGAAACAGATCGACGGGTTTCTAAACGCTCCAGGAAGATTAAAAATGGGAGTTCAATTAATCTAAAAGTGTCTGCTTCAACATCAATTTACCAGCTGAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAAGAAAATCAGATACTACAAAAAGGTGATATAACAATTGATCACATTGACGAAAATACTACACTTGTGGACGTTAACATATTTGCTGGAGATCAGATTATTGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGATGAGCTGTGTAACGAGAAAAAGGATACACAGCGTACCGAGGGAGGGTTTCGTGGAACACTTTTGACTTCAAATGTTTCATCTCAGGTTGTGTAG
Protein sequence

>Msa0007520

MSRSTARGKNKRPRQGDDDTGTSEILRKIYKTGVATDDDMSKLYMITKPVCSGCRVNTKDNPNCFCALVPPPSGTRKSGIWQKISDFVDSLGFDPNTELRESANSPAGLTNLGATCYANSILQCLYMNKRFREGLFSVEPDIFQQQPVLDQLARLFAQLHLSKKAFIDSSPFVKTLELDNEVQQDSHEFLTLLLSLLERCLSRSKISKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLTVEELNGDNQYFCESCKTRVDATRSIKLRTLPDVLNFQLKRYVFLPKTTAKKKVTSPFSFPAELSMHHRLSEPSQSELIYDLSAVLIHKGTAANSGHYIAHIKDVNTGQWWEFDDELVTNLGRCPFSEEASCSASKSVKNDLDHSNFSEARVADSNGSGSNVKVSQSLPMETFSSSDAYMLMYHLKHTKFFSENGGMETSANHTETVDVPITAQDNDCLPSHFCEEIQNFNASYLDTCQQYNHRKEVELSRISERREEVRSVLAEAPVKPLEQPYFWIYSDWLRQWAENVTPSAIDNTSIQCSHGKVPVSKVTSTKRLSSKAWDKLLSKYGGGPTLSHEDCCLDCLIDGARNVVSADTYRDQRESFKQLARDILDGKNVDGKYYVSRSWYDCKSFLLSFLFLQKGIRGDGDKLQQWWKRKVADAPSEADSGPTAAISCPHGQLMPEQATGAKRVLVPEGFWLFLYEDATSVKNDLLVCPTFHLDSKECSECSSELSEVFCMEDSMRLLKQRQRQSHEKLFNGKSMPLSLDCTYFLVPSSWISKWRTYINPAVKNSDTPETLNVVIGALLCEKHSRLIERPPELILRRGAIFPRESSAGGLTIISENDWKCFCEEWGATETQGVSAKIEKINDSVNATAGSCEEMAICEDQLANWDKGNNESGNGQFSIKTCPEVCESCIGEKESCELVHKLNYSNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRSRKIKNGSSINLKVSASTSIYQLKMMIWESFGVVKENQILQKGDITIDHIDENTTLVDVNIFAGDQIIVRDSEIHENRDIADELCNEKKDTQRTEGGFRGTLLTSNVSSQVV*