AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0010000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0010000 MtrunA17_Chr3g0143461 83.333 132 21 1 148 278 246 377 9.83e-65 207
Msa0010000 MtrunA17_Chr7g0275361 59.712 139 54 2 1 138 1 138 1.24e-50 163
Msa0010000 MtrunA17_Chr5g0432831 58.993 139 55 2 1 138 1 138 1.92e-49 160
Msa0010000 MtrunA17_Chr3g0108261 58.993 139 55 2 1 138 1 138 2.04e-49 160
Msa0010000 MtrunA17_Chr4g0037011 72.277 101 28 0 1 101 1 101 4.82e-48 157
Msa0010000 MtrunA17_Chr1g0154011 56.115 139 59 2 1 138 1 138 6.25e-48 156
Msa0010000 MtrunA17_Chr8g0369311 71.287 101 29 0 1 101 57 157 2.60e-46 154
Msa0010000 MtrunA17_Chr1g0209041 59.483 116 42 1 90 200 238 353 5.14e-40 142
Msa0010000 MtrunA17_Chr1g0211401 57.658 111 47 0 167 277 316 426 8.65e-36 132
Msa0010000 MtrunA17_Chr8g0378601 42.857 119 68 0 2 120 23 141 3.08e-30 111
Msa0010000 MtrunA17_Chr2g0316201 49.474 95 48 0 5 99 9 103 6.72e-25 97.4
Msa0010000 MtrunA17_Chr2g0316211 48.421 95 49 0 5 99 9 103 2.58e-24 95.9
Msa0010000 MtrunA17_Chr8g0362321 38.384 99 61 0 2 100 5 103 1.88e-22 90.9
Msa0010000 MtrunA17_Chr4g0060351 38.384 99 61 0 2 100 5 103 2.94e-22 90.1
Msa0010000 MtrunA17_Chr3g0131871 43.548 124 65 3 5 123 6 129 3.35e-22 91.3
Msa0010000 MtrunA17_Chr3g0139901 41.837 98 54 2 5 99 7 104 2.37e-20 85.5
Msa0010000 MtrunA17_Chr1g0199951 45.263 95 51 1 3 96 43 137 4.40e-20 85.5
Msa0010000 MtrunA17_Chr4g0038891 41.053 95 56 0 5 99 36 130 3.64e-19 82.8
Msa0010000 MtrunA17_Chr1g0198451 40.404 99 59 0 173 271 322 420 1.97e-18 84.7
Msa0010000 MtrunA17_Chr5g0396451 40.000 95 57 0 5 99 36 130 6.87e-18 79.3
Msa0010000 MtrunA17_Chr7g0254701 35.922 103 66 0 5 107 14 116 1.35e-17 80.5
Msa0010000 MtrunA17_Chr1g0198441 38.384 99 61 0 173 271 322 420 2.15e-17 81.6
Msa0010000 MtrunA17_Chr8g0372391 38.614 101 60 2 1 100 15 114 4.59e-17 76.6
Msa0010000 MtrunA17_Chr5g0404931 38.614 101 60 2 1 100 15 114 9.30e-17 75.9
Msa0010000 MtrunA17_Chr5g0442111 68.889 45 5 1 124 168 24 59 6.94e-14 66.2
Msa0010000 MtrunA17_Chr4g0031181 33.333 99 52 2 15 99 18 116 6.01e-13 65.5
Msa0010000 MtrunA17_Chr8g0387131 38.710 62 37 1 39 99 38 99 1.01e-12 65.1
Msa0010000 MtrunA17_Chr4g0068301 40.000 70 42 0 2 71 11 80 1.18e-12 67.0
Msa0010000 MtrunA17_Chr2g0328001 34.343 99 51 2 15 99 18 116 2.94e-12 63.5
Msa0010000 MtrunA17_Chr8g0348701 33.333 75 49 1 26 99 25 99 5.31e-12 63.2
Msa0010000 MtrunA17_Chr4g0059291 30.667 75 51 1 26 99 25 99 5.38e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0010000 AT4G27960.1 59.712 139 54 2 1 138 1 138 7.37e-50 162
Msa0010000 AT5G53300.2 58.993 139 55 2 1 138 1 138 1.75e-49 160
Msa0010000 AT5G53300.4 58.993 139 55 2 1 138 1 138 1.75e-49 160
Msa0010000 AT5G53300.1 58.993 139 55 2 1 138 1 138 1.75e-49 160
Msa0010000 AT5G41700.3 68.182 110 35 0 1 110 1 110 1.82e-49 160
Msa0010000 AT4G27960.2 59.712 139 54 2 1 138 31 168 4.69e-49 160
Msa0010000 AT5G53300.3 69.811 106 32 0 1 106 1 106 6.12e-49 158
Msa0010000 AT1G64230.2 58.273 139 56 2 1 138 1 138 7.24e-49 159
Msa0010000 AT1G64230.1 58.273 139 56 2 1 138 1 138 7.24e-49 159
Msa0010000 AT3G08690.2 57.554 139 57 2 1 138 1 138 1.33e-48 158
Msa0010000 AT3G08690.1 57.554 139 57 2 1 138 1 138 1.33e-48 158
Msa0010000 AT5G41700.5 73.267 101 27 0 1 101 1 101 2.65e-48 157
Msa0010000 AT5G41700.2 73.267 101 27 0 1 101 1 101 2.65e-48 157
Msa0010000 AT5G41700.1 73.267 101 27 0 1 101 1 101 2.65e-48 157
Msa0010000 AT2G16740.1 71.287 101 29 0 1 101 1 101 5.30e-48 157
Msa0010000 AT5G56150.2 69.307 101 31 0 1 101 1 101 9.20e-47 152
Msa0010000 AT5G56150.1 69.307 101 31 0 1 101 1 101 2.19e-46 153
Msa0010000 AT5G41700.4 57.143 140 57 3 1 138 1 139 2.14e-45 150
Msa0010000 AT1G64230.3 54.054 148 57 3 1 138 1 147 1.14e-44 149
Msa0010000 AT3G08700.2 65.686 102 34 1 1 101 1 102 1.52e-40 138
Msa0010000 AT3G08700.1 65.686 102 34 1 1 101 1 102 1.52e-40 138
Msa0010000 AT1G64230.5 44.199 181 57 3 1 138 1 180 1.27e-39 137
Msa0010000 AT1G64230.4 44.199 181 57 3 1 138 1 180 1.27e-39 137
Msa0010000 AT5G42210.1 56.757 111 48 0 166 276 322 432 3.56e-35 131
Msa0010000 AT3G13550.2 40.945 127 75 0 2 128 37 163 4.30e-32 117
Msa0010000 AT3G13550.1 42.982 114 65 0 2 115 37 150 1.81e-29 110
Msa0010000 AT1G68200.1 63.953 86 27 2 100 182 194 278 7.30e-28 109
Msa0010000 AT1G68200.5 63.953 86 27 2 100 182 194 278 7.30e-28 109
Msa0010000 AT1G68200.2 63.218 87 28 2 99 182 192 277 8.99e-28 109
Msa0010000 AT1G68200.6 63.218 87 28 2 99 182 192 277 8.99e-28 109
Msa0010000 AT2G16970.5 41.538 130 75 1 147 275 209 338 2.44e-26 106
Msa0010000 AT2G16980.3 48.571 105 54 0 172 276 357 461 4.67e-26 107
Msa0010000 AT2G16980.2 48.571 105 54 0 172 276 342 446 5.01e-26 106
Msa0010000 AT2G16970.2 47.115 104 55 0 172 275 342 445 6.69e-26 106
Msa0010000 AT1G16890.2 50.526 95 47 0 5 99 9 103 1.97e-25 99.0
Msa0010000 AT1G78870.3 49.474 95 48 0 5 99 9 103 2.92e-25 97.4
Msa0010000 AT1G66810.1 68.657 67 21 0 102 168 209 275 5.47e-25 101
Msa0010000 AT1G66810.3 68.657 67 21 0 102 168 209 275 5.47e-25 101
Msa0010000 AT1G78870.2 49.474 95 48 0 5 99 9 103 1.13e-24 97.1
Msa0010000 AT1G36340.2 45.545 101 52 2 2 101 9 107 1.63e-24 96.7
Msa0010000 AT1G36340.1 45.545 101 52 2 2 101 9 107 1.63e-24 96.7
Msa0010000 AT1G16890.3 53.571 84 39 0 16 99 29 112 8.14e-23 92.4
Msa0010000 AT5G62540.1 39.394 99 60 0 2 100 5 103 1.67e-22 91.3
Msa0010000 AT2G02760.1 38.384 99 61 0 2 100 5 103 2.33e-22 90.9
Msa0010000 AT2G02760.2 38.384 99 61 0 2 100 5 103 2.33e-22 90.9
Msa0010000 AT2G02760.4 38.384 99 61 0 2 100 5 103 2.33e-22 90.9
Msa0010000 AT2G02760.3 38.384 99 61 0 2 100 5 103 2.33e-22 90.9
Msa0010000 AT1G14400.1 38.384 99 61 0 2 100 5 103 2.38e-22 90.9
Msa0010000 AT1G14400.2 38.384 99 61 0 2 100 5 103 2.38e-22 90.9
Msa0010000 AT5G50870.1 41.732 127 69 3 4 125 5 131 3.79e-22 91.3
Msa0010000 AT2G16990.8 41.538 130 75 1 147 275 285 414 9.42e-22 94.4
Msa0010000 AT5G50870.2 41.600 125 68 3 4 123 5 129 1.20e-21 90.5
Msa0010000 AT2G16990.1 41.538 130 75 1 147 275 312 441 1.20e-21 94.4
Msa0010000 AT2G16990.2 41.538 130 75 1 147 275 312 441 1.20e-21 94.4
Msa0010000 AT5G25760.1 43.878 98 52 2 5 99 7 104 1.77e-21 88.6
Msa0010000 AT5G25760.2 43.878 98 52 2 5 99 7 104 1.77e-21 88.6
Msa0010000 AT2G16980.6 46.667 105 55 1 172 276 224 327 2.30e-21 92.4
Msa0010000 AT2G16980.4 46.667 105 55 1 172 276 357 460 4.00e-21 92.8
Msa0010000 AT2G16990.7 42.982 114 64 1 147 259 312 425 4.95e-21 92.4
Msa0010000 AT1G16890.1 60.317 63 25 0 37 99 8 70 5.69e-20 83.6
Msa0010000 AT1G78870.4 60.317 63 25 0 37 99 8 70 7.01e-20 83.2
Msa0010000 AT3G20060.1 42.718 103 51 2 3 99 34 134 1.40e-18 81.6
Msa0010000 AT5G42210.2 56.338 71 31 0 167 237 323 393 1.43e-18 85.1
Msa0010000 AT5G05080.2 37.895 95 59 0 5 99 14 108 1.53e-18 83.2
Msa0010000 AT5G05080.3 37.895 95 59 0 5 99 14 108 1.53e-18 83.2
Msa0010000 AT5G05080.1 37.895 95 59 0 5 99 14 108 1.53e-18 83.2
Msa0010000 AT5G05080.4 37.895 95 59 0 5 99 14 108 1.53e-18 83.2
Msa0010000 AT3G20060.2 45.977 87 45 1 13 99 5 89 1.89e-18 80.1
Msa0010000 AT1G50490.1 47.436 78 41 0 22 99 56 133 3.38e-18 80.5
Msa0010000 AT1G78870.1 59.375 64 25 1 37 99 8 71 4.41e-18 78.6
Msa0010000 AT1G75440.1 38.614 101 60 2 1 100 15 114 1.10e-16 75.9
Msa0010000 AT5G42990.1 37.624 101 61 2 1 100 15 114 1.66e-16 75.5
Msa0010000 AT1G45050.1 35.644 101 63 2 1 100 15 114 3.83e-16 74.3
Msa0010000 AT3G24515.1 41.284 109 51 3 5 100 10 118 5.24e-16 77.8
Msa0010000 AT3G24515.3 50.000 68 30 1 37 100 76 143 1.77e-15 76.3
Msa0010000 AT4G36410.1 35.644 101 63 2 1 100 15 114 3.46e-15 72.0
Msa0010000 AT2G32790.1 43.137 102 53 2 2 100 30 129 3.99e-15 72.0
Msa0010000 AT3G55380.2 35.238 105 54 2 15 105 19 123 7.63e-15 72.0
Msa0010000 AT3G17000.1 35.922 103 57 3 2 99 12 110 2.34e-14 72.4
Msa0010000 AT3G55380.1 36.364 99 49 2 15 99 19 117 2.56e-14 69.7
Msa0010000 AT5G59300.1 35.354 99 50 2 15 99 18 116 1.11e-12 65.1
Msa0010000 AT2G46030.5 32.000 100 66 2 1 99 1 99 2.01e-12 64.7
Msa0010000 AT2G46030.1 32.000 100 66 2 1 99 1 99 2.01e-12 64.7
Msa0010000 AT5G41340.1 33.000 100 65 2 1 99 1 99 2.38e-12 64.7
Msa0010000 AT2G46030.3 32.000 100 66 2 1 99 73 171 4.01e-12 65.1
Msa0010000 AT3G46460.1 34.343 99 51 2 15 99 18 116 5.59e-12 63.2
Msa0010000 AT1G63800.2 36.000 75 47 1 26 99 10 84 1.05e-11 62.4
Msa0010000 AT1G63800.1 40.323 62 36 1 39 99 38 99 1.13e-11 62.8
Msa0010000 AT2G16990.4 38.710 93 56 1 147 238 312 404 1.99e-11 64.3
Msa0010000 AT2G16990.6 38.710 93 56 1 147 238 312 404 1.99e-11 64.3
Msa0010000 AT2G46030.4 33.333 75 49 1 26 99 28 102 2.17e-11 62.0
Msa0010000 AT2G46030.2 33.333 75 49 1 26 99 28 102 2.17e-11 62.0
Msa0010000 AT4G36800.2 34.375 96 62 1 5 100 34 128 3.71e-11 61.2
Msa0010000 AT4G36800.1 34.375 96 62 1 5 100 34 128 3.71e-11 61.2

Find 131 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAACCTCTCACATATTTA+AGG 0.143428 1_1:-14884996 None:intergenic
TTATAGATTGGGTTCTATAT+TGG 0.218702 1_1:+14884589 Msa0010000:three_prime_UTR
CATTTGGATTGATATATTAA+AGG 0.242244 1_1:+14876710 Msa0010000:CDS
TCTTGAAAGATCCTCGTTAA+TGG 0.242729 1_1:-14883661 None:intergenic
CACACCTTGGGTGGAGTAAA+TGG 0.246064 1_1:-14876309 None:intergenic
TATAGATTGGGTTCTATATT+GGG 0.279264 1_1:+14884590 Msa0010000:three_prime_UTR
TTGCGTGGGTGGCGGATCAT+TGG 0.280845 1_1:-14882050 None:intergenic
CTGATAGGAGAAAGAGAAAA+AGG 0.299654 1_1:-14884922 None:intergenic
TTTCCATTACTATCAATGTT+TGG 0.306159 1_1:-14876687 None:intergenic
GATGGCCTAATAGTTGGATT+AGG 0.320977 1_1:-14884717 None:intergenic
ATGAAGCCAGGAAAATTAAA+AGG 0.324337 1_1:-14883132 None:intergenic
CCAGATAGTCCTTATGTTGA+TGG 0.326326 1_1:+14876249 Msa0010000:CDS
TTCCATTACTATCAATGTTT+GGG 0.327485 1_1:-14876686 None:intergenic
CTTGGCTTTCTCTTCATTAA+CGG 0.331892 1_1:+14883006 Msa0010000:CDS
CAACAGGCAGTGGCGGCATT+TGG 0.339764 1_1:-14883638 None:intergenic
TGCAACACCTTTGCAATAGA+TGG 0.340385 1_1:-14884735 None:intergenic
GAAGAAGGAACACGATAATA+TGG 0.342760 1_1:+14883535 Msa0010000:three_prime_UTR
TATGTCCATCTAACTCAAAA+TGG 0.345856 1_1:-14883366 None:intergenic
AGGGCTCATGTTTGCATCTC+AGG 0.351090 1_1:+14882953 Msa0010000:CDS
TCAGTGGCAAGGAGCAATTA+AGG 0.356822 1_1:+14876221 Msa0010000:CDS
TTGATAGTAATGGAAACATT+TGG 0.357113 1_1:+14876694 Msa0010000:CDS
GAACTTACCTAAATTCTATT+AGG 0.360006 1_1:-14883693 None:intergenic
CCTCTCATTTCTTGCAGTGC+TGG 0.361859 1_1:+14875202 Msa0010000:CDS
GTAAATTCGCTCACGACATT+GGG 0.363687 1_1:+14882018 Msa0010000:CDS
GGCTTCATTATAATGTGTAT+TGG 0.364749 1_1:+14883147 Msa0010000:CDS
TTAGCTTACAATTAACTGAT+AGG 0.365879 1_1:-14884937 None:intergenic
ATGACATGATACTTATAGAT+TGG 0.369608 1_1:+14884577 Msa0010000:three_prime_UTR
TGTGCCCTAATCCAACTATT+AGG 0.379826 1_1:+14884712 Msa0010000:three_prime_UTR
GAAACTGGCACATGCCCTTA+TGG 0.383739 1_1:+14881987 Msa0010000:CDS
TTGGCTTTCTCTTCATTAAC+GGG 0.383799 1_1:+14883007 Msa0010000:CDS
CCATCAACATAAGGACTATC+TGG 0.386045 1_1:-14876249 None:intergenic
AAGTTGTTAATGATTTCATT+AGG 0.396201 1_1:+14884655 Msa0010000:three_prime_UTR
TGTAACAAATGGCAGGAAAC+TGG 0.399409 1_1:+14881972 Msa0010000:CDS
TAGAGGGACAATGGGATGTT+TGG 0.404956 1_1:+14884419 Msa0010000:three_prime_UTR
TGAAACATATCTTCAGCAAT+AGG 0.412568 1_1:-14876201 None:intergenic
GCAATAGATGGCCTAATAGT+TGG 0.413635 1_1:-14884723 None:intergenic
ACAGTATAGCATGGTCCTCT+TGG 0.414780 1_1:+14882356 Msa0010000:CDS
CACCCAAACATTGATAGTAA+TGG 0.416905 1_1:+14876684 Msa0010000:CDS
ACAAAATAAAGAGCAAGAAT+TGG 0.422434 1_1:-14884819 None:intergenic
TGCGTGGGTGGCGGATCATT+GGG 0.425376 1_1:-14882049 None:intergenic
AATGCCAGGCATCTCATAGA+AGG 0.427520 1_1:-14883610 None:intergenic
ATGGCCTAATAGTTGGATTA+GGG 0.430405 1_1:-14884716 None:intergenic
TGCACATATTGTATCTCCCT+TGG 0.435532 1_1:+14882988 Msa0010000:CDS
TGTAAATTCGCTCACGACAT+TGG 0.444174 1_1:+14882017 Msa0010000:CDS
AGCTCTATTTCTATCTGAAA+AGG 0.445760 1_1:+14883107 Msa0010000:intron
AGATCCTCGTTAATGGCAAC+AGG 0.447502 1_1:-14883654 None:intergenic
CAGTATAGCATGGTCCTCTT+GGG 0.447602 1_1:+14882357 Msa0010000:CDS
GAGAACATTGCAGCAGCATA+AGG 0.448056 1_1:-14882555 None:intergenic
TAGGTTTGAGAGAATGACTA+TGG 0.451333 1_1:+14884674 Msa0010000:three_prime_UTR
TGACATGATACTTATAGATT+GGG 0.452945 1_1:+14884578 Msa0010000:three_prime_UTR
TGTACGATGGTGTTTAAACT+TGG 0.459476 1_1:-14884289 None:intergenic
CAGTGGCAAGGAGCAATTAA+GGG 0.459564 1_1:+14876222 Msa0010000:CDS
GGTTCTATATTGGGCAAAAG+AGG 0.465154 1_1:+14884599 Msa0010000:three_prime_UTR
AATTTACAGTGGTCTCCATA+AGG 0.465847 1_1:-14882002 None:intergenic
TAATGTGTATTGGAATTGCT+TGG 0.466009 1_1:+14883157 Msa0010000:CDS
AGAACAAGCACAAATGTTAG+AGG 0.472788 1_1:+14884402 Msa0010000:three_prime_UTR
ACCTTGGATATGGTAAGAGC+AGG 0.483396 1_1:-14876744 None:intergenic
GAGTTGCATCAAGTTGAAGA+TGG 0.493345 1_1:+14884540 Msa0010000:three_prime_UTR
TATTCCTTCTATGAGATGCC+TGG 0.496545 1_1:+14883606 Msa0010000:three_prime_UTR
AACAGAGCAAACATACTTTG+TGG 0.497241 1_1:+14884972 Msa0010000:three_prime_UTR
TCGTTAATGGCAACAGGCAG+TGG 0.497673 1_1:-14883648 None:intergenic
TGCACCTATCACTGCAAAAG+TGG 0.498118 1_1:+14884461 Msa0010000:three_prime_UTR
AAAGTGGATATCTACAGCTT+TGG 0.498218 1_1:+14884477 Msa0010000:three_prime_UTR
TTTATGCTATGGCTTCAAAT+CGG 0.503114 1_1:+14875146 None:intergenic
AAAGTTTCTATAGATAAAGA+AGG 0.504229 1_1:-14883417 None:intergenic
GGCATTTGGCTCATAATGCC+AGG 0.504404 1_1:-14883624 None:intergenic
TTTGAGAGAATGACTATGGT+TGG 0.507037 1_1:+14884678 Msa0010000:three_prime_UTR
GTTCTATATTGGGCAAAAGA+GGG 0.512150 1_1:+14884600 Msa0010000:three_prime_UTR
AGAACTCAGGGATATGCAAA+AGG 0.514672 1_1:+14875177 Msa0010000:CDS
AATGTGTATTGGAATTGCTT+GGG 0.517681 1_1:+14883158 Msa0010000:CDS
ACAAATGTTAGAGGGACAAT+GGG 0.521045 1_1:+14884411 Msa0010000:three_prime_UTR
ATTTACAGTGGTCTCCATAA+GGG 0.527756 1_1:-14882001 None:intergenic
AGACTGAGCTCTGTAACAAA+TGG 0.531908 1_1:+14881961 Msa0010000:CDS
CTTCATACTAAGAAAGAAGA+AGG 0.534068 1_1:+14883520 Msa0010000:three_prime_UTR
CATTAACAACTTCAACATCA+TGG 0.537170 1_1:-14884644 None:intergenic
CACAAATGTTAGAGGGACAA+TGG 0.540064 1_1:+14884410 Msa0010000:three_prime_UTR
GCTCAGTCTTGAACATCCCC+TGG 0.541107 1_1:-14881947 None:intergenic
ACAAGATGATCCCTGTGAGC+AGG 0.541778 1_1:+14882734 Msa0010000:CDS
TGAACATGATACCTGCTCAC+AGG 0.545763 1_1:-14882745 None:intergenic
TGCAAAGGTGTTGCAGATGT+CGG 0.550893 1_1:+14884743 Msa0010000:three_prime_UTR
CCCTGCTCTTACCATATCCA+AGG 0.555910 1_1:+14876743 Msa0010000:CDS
ATACACATTATAATGAAGCC+AGG 0.562281 1_1:-14883144 None:intergenic
TGAGCTCTGTAACAAATGGC+AGG 0.566245 1_1:+14881965 Msa0010000:CDS
AAAAGGTATTTGTGCGAGGA+GGG 0.574881 1_1:+14881886 Msa0010000:CDS
CAAGTTGAAGATGGAACAGA+AGG 0.575586 1_1:+14884549 Msa0010000:three_prime_UTR
TCCATCTAACTCAAAATGGA+AGG 0.576928 1_1:-14883362 None:intergenic
TGGGATGTTTGGCACCAGAA+TGG 0.578599 1_1:+14884430 Msa0010000:three_prime_UTR
ATGAATATACACACCTTGGG+TGG 0.578941 1_1:-14876318 None:intergenic
CTTTAATTGTGCTTCTGATG+AGG 0.580908 1_1:+14883442 Msa0010000:three_prime_UTR
TGTGCGAGGAGGGCGGAAAG+AGG 0.581667 1_1:+14881896 Msa0010000:CDS
TGAGATGGTTGTGTACAACC+AGG 0.582022 1_1:+14881929 Msa0010000:CDS
TTGATATATTAAAGGATCAG+TGG 0.586059 1_1:+14876718 Msa0010000:CDS
AGAGGAAGAGCCTCTTGAGA+TGG 0.592690 1_1:+14881914 Msa0010000:CDS
TCAGAGTATGATGCTTAGAG+TGG 0.595054 1_1:+14883337 Msa0010000:CDS
AGTGTTCCACCATTGTTCGA+TGG 0.595949 1_1:+14884783 Msa0010000:three_prime_UTR
GAACATGATACCTGCTCACA+GGG 0.599005 1_1:-14882744 None:intergenic
TTCTATATTGGGCAAAAGAG+GGG 0.600711 1_1:+14884601 Msa0010000:three_prime_UTR
TTATCCATTTACTCCACCCA+AGG 0.600747 1_1:+14876305 Msa0010000:CDS
ACAGGTTATATTCTTGACAA+AGG 0.600774 1_1:+14876656 Msa0010000:intron
CAAAAGGTATTTGTGCGAGG+AGG 0.603500 1_1:+14881885 Msa0010000:CDS
GTGCTTCTGATGAGGAAGAA+AGG 0.605953 1_1:+14883450 Msa0010000:three_prime_UTR
TGTTCATTTACAGTATAGCA+TGG 0.612842 1_1:+14882347 Msa0010000:CDS
GAAGATATGTTTCAGTGGCA+AGG 0.618908 1_1:+14876210 Msa0010000:CDS
AAGGTGTTGCAGATGTCGGA+AGG 0.619686 1_1:+14884747 Msa0010000:three_prime_UTR
CGTTAATGAAGAGAAAGCCA+AGG 0.620962 1_1:-14883005 None:intergenic
TATTAGGCCATCTATTGCAA+AGG 0.622506 1_1:+14884728 Msa0010000:three_prime_UTR
GTGGTCCTTAAATATGTGAG+AGG 0.625201 1_1:+14884991 Msa0010000:three_prime_UTR
GAACAAGCACAAATGTTAGA+GGG 0.627687 1_1:+14884403 Msa0010000:three_prime_UTR
CAGCAAAAGGTATTTGTGCG+AGG 0.628338 1_1:+14881882 Msa0010000:intron
GGAGTAAATGGATAATCTCG+AGG 0.628946 1_1:-14876297 None:intergenic
AAATTTCCATCGAACAATGG+TGG 0.629403 1_1:-14884789 None:intergenic
CCTTGGATATGGTAAGAGCA+GGG 0.631546 1_1:-14876743 None:intergenic
AGGTATTTGTGCGAGGAGGG+CGG 0.633035 1_1:+14881889 Msa0010000:CDS
GTTGAAGATGGAACAGAAGG+TGG 0.634859 1_1:+14884552 Msa0010000:three_prime_UTR
GAGATGGTTGTGTACAACCA+GGG 0.638365 1_1:+14881930 Msa0010000:CDS
TTGCTGAAGATATGTTTCAG+TGG 0.645133 1_1:+14876205 Msa0010000:CDS
TTGTACACAACCATCTCAAG+AGG 0.647753 1_1:-14881924 None:intergenic
TTAATGGCAACAGGCAGTGG+CGG 0.648108 1_1:-14883645 None:intergenic
TAAATTCGCTCACGACATTG+GGG 0.660354 1_1:+14882019 Msa0010000:CDS
GAGTAAATGGATAATCTCGA+GGG 0.665603 1_1:-14876296 None:intergenic
CCAGCACTGCAAGAAATGAG+AGG 0.673304 1_1:-14875202 None:intergenic
GAAGGAACACGATAATATGG+TGG 0.676501 1_1:+14883538 Msa0010000:three_prime_UTR
GTTAATGAAGAGAAAGCCAA+GGG 0.677516 1_1:-14883004 None:intergenic
CCACCCACGCAACAAAACTG+AGG 0.689524 1_1:+14882061 Msa0010000:CDS
TAGCTAAAGACATACCCAAG+AGG 0.693874 1_1:-14882371 None:intergenic
TGTCGTGAGCGAATTTACAG+TGG 0.707236 1_1:-14882013 None:intergenic
TCAACATAAGGACTATCTGG+AGG 0.709520 1_1:-14876246 None:intergenic
ACTGCCTGTTGCCATTAACG+AGG 0.709980 1_1:+14883650 Msa0010000:three_prime_UTR
AGATGGTTGTGTACAACCAG+GGG 0.741581 1_1:+14881931 Msa0010000:CDS
GAATGACTATGGTTGGACTG+TGG 0.741878 1_1:+14884685 Msa0010000:three_prime_UTR
ATATGCAAGAAAGTGTACGA+TGG 0.782498 1_1:-14884302 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATTATATTAGTAG+GGG - chr1_1:14875505-14875524 None:intergenic 10.0%
!! CATAAAAAATTATATTAGTA+GGG - chr1_1:14875506-14875525 None:intergenic 10.0%
!! ACATAAAAAATTATATTAGT+AGG - chr1_1:14875507-14875526 None:intergenic 10.0%
!!! TCAAATTTTATTTCAAAAAA+TGG - chr1_1:14876844-14876863 None:intergenic 10.0%
!!! ATGATTTTCTATTTATAATT+TGG + chr1_1:14879658-14879677 Msa0010000:intron 10.0%
!! TATAATTTGGAAAAATTATT+TGG + chr1_1:14879671-14879690 Msa0010000:intron 10.0%
!!! CAATTAATTGAATATATTTT+GGG + chr1_1:14881566-14881585 Msa0010000:intron 10.0%
!!! ATTATATTTTGAATAACAAA+GGG - chr1_1:14882664-14882683 None:intergenic 10.0%
!!! AATTATATTTTGAATAACAA+AGG - chr1_1:14882665-14882684 None:intergenic 10.0%
!!! CTTCAATTTTATGTTTAATT+CGG + chr1_1:14875345-14875364 Msa0010000:intron 15.0%
!!! TTCAATTTTATGTTTAATTC+GGG + chr1_1:14875346-14875365 Msa0010000:intron 15.0%
!!! GCAATTTTGTATTTTTTTTA+TGG + chr1_1:14875636-14875655 Msa0010000:intron 15.0%
!!! TTAAATCTTTTGGTTTAAAT+TGG + chr1_1:14875730-14875749 Msa0010000:intron 15.0%
!! ATATAATCATTAATAGTAGA+TGG + chr1_1:14875830-14875849 Msa0010000:intron 15.0%
!!! ATCCAAATTTTTTATCAAAT+GGG - chr1_1:14875862-14875881 None:intergenic 15.0%
!! TCGATAAATTAATGTTTAAA+TGG - chr1_1:14876447-14876466 None:intergenic 15.0%
!! TAGTTAGTATTATATTCAAT+TGG + chr1_1:14876547-14876566 Msa0010000:intron 15.0%
!!! ATAATAAGAAGCATATTTTA+AGG - chr1_1:14876810-14876829 None:intergenic 15.0%
!!! ACCATATTTTATAATTTATG+TGG + chr1_1:14876961-14876980 Msa0010000:intron 15.0%
!! TCCACATAAATTATAAAATA+TGG - chr1_1:14876965-14876984 None:intergenic 15.0%
!! TAATTTATGTGGAAATAATT+AGG + chr1_1:14876972-14876991 Msa0010000:intron 15.0%
!!! TATTTCTATGTCATATAAAT+AGG + chr1_1:14877125-14877144 Msa0010000:intron 15.0%
!! AAATTGAATGTAAAAATTGT+AGG + chr1_1:14878083-14878102 Msa0010000:intron 15.0%
!!! AAACTTTTCATATCATAAAT+TGG - chr1_1:14878489-14878508 None:intergenic 15.0%
!!! ATGAAAAGTTTTTTTTTTTG+TGG + chr1_1:14878498-14878517 Msa0010000:intron 15.0%
!!! TGAAAAGTTTTTTTTTTTGT+GGG + chr1_1:14878499-14878518 Msa0010000:intron 15.0%
!!! TTTAAAATTAGTGATTTGTT+GGG + chr1_1:14878560-14878579 Msa0010000:intron 15.0%
!!! AGATTGATTTTTAATGAATT+TGG + chr1_1:14878663-14878682 Msa0010000:intron 15.0%
!!! TTAAAAATCAATCAAAGTTT+TGG - chr1_1:14878738-14878757 None:intergenic 15.0%
!!! TTTATTTGATAACACATTTT+TGG + chr1_1:14879461-14879480 Msa0010000:intron 15.0%
!!! TTATTTGATAACACATTTTT+GGG + chr1_1:14879462-14879481 Msa0010000:intron 15.0%
!!! TGTGAATTTGATTTTTTTTT+GGG + chr1_1:14880130-14880149 Msa0010000:intron 15.0%
!!! ATATTGAAAAATTTTCTTTG+TGG + chr1_1:14880422-14880441 Msa0010000:intron 15.0%
!!! TATTGAAAAATTTTCTTTGT+GGG + chr1_1:14880423-14880442 Msa0010000:intron 15.0%
!! ATTATAATCTAAAAACTGTA+TGG - chr1_1:14881016-14881035 None:intergenic 15.0%
!!! CAGTTTTTAGATTATAATTT+AGG + chr1_1:14881018-14881037 Msa0010000:intron 15.0%
!!! TTTTTAGATTATAATTTAGG+TGG + chr1_1:14881021-14881040 Msa0010000:intron 15.0%
!!! TTTAAAACTTAATAAAACCA+AGG - chr1_1:14881260-14881279 None:intergenic 15.0%
!!! TTGGTTTTATTAAGTTTTAA+AGG + chr1_1:14881259-14881278 Msa0010000:intron 15.0%
!!! TGGTTTTATTAAGTTTTAAA+GGG + chr1_1:14881260-14881279 Msa0010000:intron 15.0%
!!! GCAATTAATTGAATATATTT+TGG + chr1_1:14881565-14881584 Msa0010000:intron 15.0%
!! TTATGCTGTATTAATTAATA+AGG + chr1_1:14882515-14882534 Msa0010000:intron 15.0%
!!! TTATATTTTGAATAACAAAG+GGG - chr1_1:14882663-14882682 None:intergenic 15.0%
!! CACAAAAAAAAAAAAACAAA+TGG - chr1_1:14883776-14883795 None:intergenic 15.0%
!!! TATGGAAATCATTTTAAAAA+AGG - chr1_1:14884124-14884143 None:intergenic 15.0%
!!! TGTATATGATATTTTTTCAA+AGG - chr1_1:14884188-14884207 None:intergenic 15.0%
!!! TCGTTTTGAAATAAAATACT+TGG + chr1_1:14875302-14875321 Msa0010000:intron 20.0%
!!! ATTGTTTTTAATTGTTGAAG+TGG + chr1_1:14875440-14875459 Msa0010000:intron 20.0%
!!! TGATGTATCTTTAAATCTTT+TGG + chr1_1:14875720-14875739 Msa0010000:intron 20.0%
!!! TCCAAATTTTTTATCAAATG+GGG - chr1_1:14875861-14875880 None:intergenic 20.0%
!!! GATCCAAATTTTTTATCAAA+TGG - chr1_1:14875863-14875882 None:intergenic 20.0%
!!! GTTGATTTTACTATCATTTT+TGG + chr1_1:14875910-14875929 Msa0010000:intron 20.0%
!!! TTTACTATCATTTTTGGTTA+AGG + chr1_1:14875916-14875935 Msa0010000:intron 20.0%
!!! TTTCATATGTTTTTGTAGTT+TGG + chr1_1:14876015-14876034 Msa0010000:intron 20.0%
!! ATAATTTCTTATGCATTTGT+TGG + chr1_1:14876082-14876101 Msa0010000:intron 20.0%
!! TTTCAAATTCAATACAGTAT+AGG + chr1_1:14876177-14876196 Msa0010000:intron 20.0%
!! CATTTGGATTGATATATTAA+AGG + chr1_1:14876710-14876729 Msa0010000:CDS 20.0%
!! ACAAATTTAAAAACAAACCT+TGG - chr1_1:14876763-14876782 None:intergenic 20.0%
!!! CTTTTCATACAAATGTTATT+AGG - chr1_1:14877347-14877366 None:intergenic 20.0%
!! AAACTTCTACTAAACTATAT+AGG + chr1_1:14877400-14877419 Msa0010000:intron 20.0%
!! ATTTAATTGATAGATTGTGT+AGG + chr1_1:14877847-14877866 Msa0010000:intron 20.0%
!!! AATTTTTTTTTCCTTTCTTC+AGG + chr1_1:14877994-14878013 Msa0010000:intron 20.0%
!!! CAGCTATAAATAATTTTGTA+TGG + chr1_1:14878447-14878466 Msa0010000:intron 20.0%
!!! GTTTAAAATTAGTGATTTGT+TGG + chr1_1:14878559-14878578 Msa0010000:intron 20.0%
!!! GTTGATGAATCTAATTTTTT+TGG + chr1_1:14878685-14878704 Msa0010000:intron 20.0%
!!! TGATTGATTTTTAATGACAT+TGG + chr1_1:14878744-14878763 Msa0010000:intron 20.0%
!! ATATCATTCATACAGTTATA+CGG + chr1_1:14878811-14878830 Msa0010000:intron 20.0%
!! AGTACTTAGATCATAATTAA+TGG - chr1_1:14878916-14878935 None:intergenic 20.0%
!!! ATTTTGCTAAAAAGATTTCT+TGG + chr1_1:14879001-14879020 Msa0010000:intron 20.0%
!!! TTTGAAAAAACGACTATTTT+TGG + chr1_1:14879254-14879273 Msa0010000:intron 20.0%
!!! ATCTGAAAATAAGTTTGTTT+TGG - chr1_1:14879546-14879565 None:intergenic 20.0%
!! AAAATTATTTGGTCTATTTG+TGG + chr1_1:14879682-14879701 Msa0010000:intron 20.0%
!!! TGTTTGCAAATTTTATCTTA+TGG + chr1_1:14880053-14880072 Msa0010000:intron 20.0%
!!! GTGTGAATTTGATTTTTTTT+TGG + chr1_1:14880129-14880148 Msa0010000:intron 20.0%
!!! TTGCTTTTTATAATCTATTC+AGG + chr1_1:14880379-14880398 Msa0010000:intron 20.0%
!!! TTTTCAATATCATAAATTCG+TGG - chr1_1:14880412-14880431 None:intergenic 20.0%
!!! TGATATTTTAAACTGATAGA+TGG + chr1_1:14880752-14880771 Msa0010000:intron 20.0%
!!! GCATCAAAATTTAACTTAAT+TGG - chr1_1:14880991-14881010 None:intergenic 20.0%
!!! TTTGTATTTTCAACTTTTAG+TGG + chr1_1:14881222-14881241 Msa0010000:intron 20.0%
!!! GGTTTTATTAAGTTTTAAAG+GGG + chr1_1:14881261-14881280 Msa0010000:intron 20.0%
!! AACAAAATCAAACAACTAAA+TGG - chr1_1:14881425-14881444 None:intergenic 20.0%
!!! ATTTTGAAATGGTAATTTCT+TGG + chr1_1:14881530-14881549 Msa0010000:intron 20.0%
!!! CTAATTTAGAATTTTTGTCT+TGG - chr1_1:14882306-14882325 None:intergenic 20.0%
!! TAATAAGGTAACATGTTTAT+AGG + chr1_1:14882530-14882549 Msa0010000:intron 20.0%
!!! AGTGGTAATATATTTTTGTT+AGG + chr1_1:14882779-14882798 Msa0010000:intron 20.0%
!!! GATTGAATGCTATTTATTTT+TGG + chr1_1:14882872-14882891 Msa0010000:intron 20.0%
!! CAGATTATAATCTATTAAGT+TGG + chr1_1:14882899-14882918 Msa0010000:intron 20.0%
!! AAGAAAGAATCATACAAATA+TGG - chr1_1:14883260-14883279 None:intergenic 20.0%
!! TTCTTTCTTGTCTAATTATA+TGG + chr1_1:14883271-14883290 Msa0010000:intron 20.0%
!! AAAGTTTCTATAGATAAAGA+AGG - chr1_1:14883420-14883439 None:intergenic 20.0%
!! ATTTCATTAAATAATGCACT+TGG - chr1_1:14883800-14883819 None:intergenic 20.0%
!! AATTAAATTGAAACATAGTG+TGG - chr1_1:14883859-14883878 None:intergenic 20.0%
!!! ATTGATTTACCTAATTAGTT+TGG + chr1_1:14883876-14883895 Msa0010000:intron 20.0%
!!! AATTAAAGCATTTTTTCGAA+TGG + chr1_1:14884353-14884372 Msa0010000:three_prime_UTR 20.0%
!!! TTGAAATCTTATTTTGTAGA+AGG + chr1_1:14884511-14884530 Msa0010000:three_prime_UTR 20.0%
!! AAGTTGTTAATGATTTCATT+AGG + chr1_1:14884655-14884674 Msa0010000:three_prime_UTR 20.0%
!!! TAAGTCACCAAATATATTTT+CGG + chr1_1:14884883-14884902 Msa0010000:three_prime_UTR 20.0%
! ATAATCAATGCACTAAGATA+AGG - chr1_1:14875256-14875275 None:intergenic 25.0%
! TAGCAAATCACTAATTTAGA+GGG - chr1_1:14875580-14875599 None:intergenic 25.0%
!!! CCAAATTTTTTATCAAATGG+GGG - chr1_1:14875860-14875879 None:intergenic 25.0%
! AAAAAATTTGGATCTGTCAT+TGG + chr1_1:14875869-14875888 Msa0010000:intron 25.0%
!! AATGTTTGTTCGATTTTATG+TGG + chr1_1:14875941-14875960 Msa0010000:intron 25.0%
!! ATGTTTGTTCGATTTTATGT+GGG + chr1_1:14875942-14875961 Msa0010000:intron 25.0%
! AAAGAAATTGAGCATGTTTA+AGG - chr1_1:14876481-14876500 None:intergenic 25.0%
! TTCCATTACTATCAATGTTT+GGG - chr1_1:14876689-14876708 None:intergenic 25.0%
! TTTCCATTACTATCAATGTT+TGG - chr1_1:14876690-14876709 None:intergenic 25.0%
!! TTGATAGTAATGGAAACATT+TGG + chr1_1:14876694-14876713 Msa0010000:CDS 25.0%
! TTGATATATTAAAGGATCAG+TGG + chr1_1:14876718-14876737 Msa0010000:CDS 25.0%
! TTAAAAACAAACCTTGGATA+TGG - chr1_1:14876757-14876776 None:intergenic 25.0%
! ATAATTAGGAACAGATATTG+TGG + chr1_1:14876986-14877005 Msa0010000:intron 25.0%
!! TGTAGTACACATATTTTATG+TGG + chr1_1:14877014-14877033 Msa0010000:intron 25.0%
! TAAACATATGATATGTGTGT+TGG + chr1_1:14877294-14877313 Msa0010000:intron 25.0%
! TTTAGTAGAAGTTTAGTAGA+TGG - chr1_1:14877394-14877413 None:intergenic 25.0%
!! TATTTTCGTCATTTGGTAAA+TGG + chr1_1:14877466-14877485 Msa0010000:intron 25.0%
!! ATTTTCGTCATTTGGTAAAT+GGG + chr1_1:14877467-14877486 Msa0010000:intron 25.0%
! TACAAAATCATATTTGCATG+TGG - chr1_1:14877682-14877701 None:intergenic 25.0%
! TATGATAATTTCATCCCATA+AGG + chr1_1:14878036-14878055 Msa0010000:intron 25.0%
! TTACATAGAACATACCTTAT+GGG - chr1_1:14878053-14878072 None:intergenic 25.0%
! TTTACATAGAACATACCTTA+TGG - chr1_1:14878054-14878073 None:intergenic 25.0%
!!! TGGTTTTAGCATAAATTTTC+AGG + chr1_1:14878311-14878330 Msa0010000:intron 25.0%
!!! TTTTAGCATAAATTTTCAGG+AGG + chr1_1:14878314-14878333 Msa0010000:intron 25.0%
!!! TTTTTAATGACATTGGTTGA+TGG + chr1_1:14878751-14878770 Msa0010000:intron 25.0%
! TTGTATAATTGTTCTGCAAA+AGG - chr1_1:14878862-14878881 None:intergenic 25.0%
! TTTGCAGAACAATTATACAA+TGG + chr1_1:14878862-14878881 Msa0010000:intron 25.0%
! AATGGATGCATACAAATTAA+TGG - chr1_1:14878898-14878917 None:intergenic 25.0%
! TATTGTTTGTGCTATGAATT+AGG + chr1_1:14878945-14878964 Msa0010000:intron 25.0%
! ATATACACATTGCAAAAAGA+TGG - chr1_1:14879392-14879411 None:intergenic 25.0%
! CTTCAAAAAATCTTGACATA+TGG - chr1_1:14879829-14879848 None:intergenic 25.0%
!! AACTATCTAAAGTTCTATCA+AGG + chr1_1:14879957-14879976 Msa0010000:intron 25.0%
! TTGATTATCATTCAATTACC+TGG - chr1_1:14880241-14880260 None:intergenic 25.0%
! GTAATTGAATGATAATCAAC+TGG + chr1_1:14880242-14880261 Msa0010000:intron 25.0%
!!! ATGAGATAAAGATTTTAGAG+AGG + chr1_1:14880779-14880798 Msa0010000:intron 25.0%
!!! AAAGATTTTAGAGAGGAAAT+AGG + chr1_1:14880786-14880805 Msa0010000:intron 25.0%
! ACATTATAGGAGAATTTAAG+AGG + chr1_1:14881135-14881154 Msa0010000:intron 25.0%
!!! TAAAACCAAGGTATTGATTT+TGG - chr1_1:14881248-14881267 None:intergenic 25.0%
! TACTTAGAGATAAAGATGAA+TGG + chr1_1:14881488-14881507 Msa0010000:intron 25.0%
!!! AACTGTGTTCAATTTTGAAA+TGG + chr1_1:14881519-14881538 Msa0010000:intron 25.0%
!!! TTTTACATTAAAGAGTGTCA+AGG - chr1_1:14881748-14881767 None:intergenic 25.0%
!! AAGAAAAACTCTGAAAAGTT+TGG - chr1_1:14882245-14882264 None:intergenic 25.0%
!! GAGTTTTTCTTTTTGCAATA+TGG + chr1_1:14882254-14882273 Msa0010000:intron 25.0%
!!! GTAGTAACTTATTTTAGAAG+TGG + chr1_1:14882441-14882460 Msa0010000:intron 25.0%
! TAATACAGCATAAAATGAGA+AGG - chr1_1:14882508-14882527 None:intergenic 25.0%
! TTCCTCATTCTATATATCTT+TGG + chr1_1:14882616-14882635 Msa0010000:intron 25.0%
! AACCAAAGATATATAGAATG+AGG - chr1_1:14882621-14882640 None:intergenic 25.0%
!! AAGGGGAAAGTATATTTAAA+AGG - chr1_1:14882646-14882665 None:intergenic 25.0%
! TCACTTATCTTATTCTTTCA+GGG + chr1_1:14882929-14882948 Msa0010000:intron 25.0%
! AGAAATAAAAATAGAGAGCA+TGG - chr1_1:14883210-14883229 None:intergenic 25.0%
!!! GATTAATTTTTGTTTGCAGA+TGG + chr1_1:14883304-14883323 Msa0010000:intron 25.0%
!! CATTTTGCCTAATAGAATTT+AGG + chr1_1:14883686-14883705 Msa0010000:three_prime_UTR 25.0%
! GAACTTACCTAAATTCTATT+AGG - chr1_1:14883696-14883715 None:intergenic 25.0%
! ATAGAATTTAGGTAAGTTCT+TGG + chr1_1:14883697-14883716 Msa0010000:intron 25.0%
! TTCAAACTTCCAAACTAATT+AGG - chr1_1:14883888-14883907 None:intergenic 25.0%
! CTAATTTCAACTTATTAGGA+AGG - chr1_1:14883938-14883957 None:intergenic 25.0%
! CTCACTAATTTCAACTTATT+AGG - chr1_1:14883942-14883961 None:intergenic 25.0%
!! CTAATAAGTTGAAATTAGTG+AGG + chr1_1:14883940-14883959 Msa0010000:intron 25.0%
!!! ATTAGTGAGGTTTTTCAATT+TGG + chr1_1:14883953-14883972 Msa0010000:intron 25.0%
! ATAGTATGAGCTAATAATCT+CGG + chr1_1:14884013-14884032 Msa0010000:intron 25.0%
!! TCCATATTCATTATGCATTT+TGG + chr1_1:14884138-14884157 Msa0010000:intron 25.0%
! ACCAAAATGCATAATGAATA+TGG - chr1_1:14884142-14884161 None:intergenic 25.0%
! ATGACATGATACTTATAGAT+TGG + chr1_1:14884577-14884596 Msa0010000:three_prime_UTR 25.0%
! TGACATGATACTTATAGATT+GGG + chr1_1:14884578-14884597 Msa0010000:three_prime_UTR 25.0%
! TTATAGATTGGGTTCTATAT+TGG + chr1_1:14884589-14884608 Msa0010000:three_prime_UTR 25.0%
! TATAGATTGGGTTCTATATT+GGG + chr1_1:14884590-14884609 Msa0010000:three_prime_UTR 25.0%
! AAAAAATTTCCATCGAACAA+TGG - chr1_1:14884795-14884814 None:intergenic 25.0%
! ACAAAATAAAGAGCAAGAAT+TGG - chr1_1:14884822-14884841 None:intergenic 25.0%
!! AAGTCACCAAATATATTTTC+GGG + chr1_1:14884884-14884903 Msa0010000:three_prime_UTR 25.0%
! GAAAAACCCGAAAATATATT+TGG - chr1_1:14884893-14884912 None:intergenic 25.0%
!!! ATATATTTTCGGGTTTTTCA+TGG + chr1_1:14884894-14884913 Msa0010000:three_prime_UTR 25.0%
! TTAGCTTACAATTAACTGAT+AGG - chr1_1:14884940-14884959 None:intergenic 25.0%
!! TTTTAATTGTTGAAGTGGAC+AGG + chr1_1:14875445-14875464 Msa0010000:intron 30.0%
TTTAATTGTTGAAGTGGACA+GGG + chr1_1:14875446-14875465 Msa0010000:intron 30.0%
CTAGCAAATCACTAATTTAG+AGG - chr1_1:14875581-14875600 None:intergenic 30.0%
CCCCCATTTGATAAAAAATT+TGG + chr1_1:14875857-14875876 Msa0010000:intron 30.0%
TCCATGATGTTGTTGAAAAA+TGG + chr1_1:14875981-14876000 Msa0010000:intron 30.0%
!! TCCATTTTTCAACAACATCA+TGG - chr1_1:14875985-14876004 None:intergenic 30.0%
! TTGGTTTCTATGTAAGCTTT+TGG + chr1_1:14876034-14876053 Msa0010000:intron 30.0%
TGAAACATATCTTCAGCAAT+AGG - chr1_1:14876204-14876223 None:intergenic 30.0%
AAGATGAATATACACACCTT+GGG - chr1_1:14876324-14876343 None:intergenic 30.0%
! ACATGCTCAATTTCTTTTCT+TGG + chr1_1:14876484-14876503 Msa0010000:intron 30.0%
! CTCAATTTCTTTTCTTGGAA+GGG + chr1_1:14876489-14876508 Msa0010000:intron 30.0%
ACAGGTTATATTCTTGACAA+AGG + chr1_1:14876656-14876675 Msa0010000:intron 30.0%
CGACATAGAAAAATCCTTAA+AGG + chr1_1:14876876-14876895 Msa0010000:intron 30.0%
!! AGACTTTAGAACATCCTTTA+AGG - chr1_1:14876893-14876912 None:intergenic 30.0%
ATATGTTTAATTGTAGCCCA+TGG - chr1_1:14877283-14877302 None:intergenic 30.0%
! AATTTTTACTCCAAGTGTTC+AGG + chr1_1:14877321-14877340 Msa0010000:intron 30.0%
GGGCAAAATGGTAAAAAAAA+TGG - chr1_1:14877437-14877456 None:intergenic 30.0%
! TTTTCGTCATTTGGTAAATG+GGG + chr1_1:14877468-14877487 Msa0010000:intron 30.0%
TGGAGAAATGAGAGAAATAT+GGG - chr1_1:14877522-14877541 None:intergenic 30.0%
! TGTTTTATAAGAGAGAGAAG+GGG - chr1_1:14877577-14877596 None:intergenic 30.0%
! CTGTTTTATAAGAGAGAGAA+GGG - chr1_1:14877578-14877597 None:intergenic 30.0%
! TCTGTTTTATAAGAGAGAGA+AGG - chr1_1:14877579-14877598 None:intergenic 30.0%
TTTGGTGAAATTTGATGGAA+AGG - chr1_1:14877657-14877676 None:intergenic 30.0%
ACCATAAATCAGAATTGAGT+GGG - chr1_1:14877753-14877772 None:intergenic 30.0%
!!! TATGGTGAGTTTTGTTTGAT+TGG + chr1_1:14877767-14877786 Msa0010000:intron 30.0%
!!! ATGGTGAGTTTTGTTTGATT+GGG + chr1_1:14877768-14877787 Msa0010000:intron 30.0%
!!! TGTATGACTTTTGTTTCTAC+TGG + chr1_1:14878270-14878289 Msa0010000:intron 30.0%
GGTTTATCTATACAGTAACA+TGG + chr1_1:14878291-14878310 Msa0010000:intron 30.0%
!! CATAAGTTTTATGTGTTTGC+TGG + chr1_1:14878532-14878551 Msa0010000:intron 30.0%
!! TCACTGTCATCTAAAGTTTT+AGG - chr1_1:14878779-14878798 None:intergenic 30.0%
!! TACAAATTAATGGACTTCCA+GGG - chr1_1:14878888-14878907 None:intergenic 30.0%
!! ATACAAATTAATGGACTTCC+AGG - chr1_1:14878889-14878908 None:intergenic 30.0%
AAACCAATGTTATAGCATAG+CGG + chr1_1:14879229-14879248 Msa0010000:intron 30.0%
ACGTATAGATACATTATGCA+AGG + chr1_1:14879300-14879319 Msa0010000:intron 30.0%
AAGAGTTCAAGTCTACTTAT+AGG + chr1_1:14879362-14879381 Msa0010000:intron 30.0%
GATCATTTAATTGCACAATC+TGG - chr1_1:14879494-14879513 None:intergenic 30.0%
TAAATGATCTCAAAGTCAGT+AGG + chr1_1:14879433-14879452 Msa0010000:intron 30.0%
TCAGATCATTTATAACCCAA+AGG + chr1_1:14879560-14879579 Msa0010000:intron 30.0%
CAGATCATTTATAACCCAAA+GGG + chr1_1:14879561-14879580 Msa0010000:intron 30.0%
TATTGTGAAATCAACCCTTT+GGG - chr1_1:14879578-14879597 None:intergenic 30.0%
! GAAGACTTTTACACAGAAAA+TGG - chr1_1:14879604-14879623 None:intergenic 30.0%
! GAGAATCTGCATTGATATTA+TGG - chr1_1:14879632-14879651 None:intergenic 30.0%
ATGAGAAAATCATGAGTTCT+GGG - chr1_1:14879916-14879935 None:intergenic 30.0%
AATGAGAAAATCATGAGTTC+TGG - chr1_1:14879917-14879936 None:intergenic 30.0%
AATGCATCTAATAAGTGCTA+AGG - chr1_1:14880007-14880026 None:intergenic 30.0%
! GCAAATTTTATCTTATGGTG+AGG + chr1_1:14880058-14880077 Msa0010000:intron 30.0%
TAAGATACTGATGATACAGA+TGG - chr1_1:14880185-14880204 None:intergenic 30.0%
! TTACCAAGCTTAATTTTTCC+AGG + chr1_1:14880220-14880239 Msa0010000:intron 30.0%
TTACCTGGAAAAATTAAGCT+TGG - chr1_1:14880226-14880245 None:intergenic 30.0%
ATTGAATGATAATCAACTGG+TGG + chr1_1:14880245-14880264 Msa0010000:intron 30.0%
TTGAATGATAATCAACTGGT+GGG + chr1_1:14880246-14880265 Msa0010000:intron 30.0%
TGGGTTAAAATGTCACAAAA+AGG - chr1_1:14880501-14880520 None:intergenic 30.0%
AAACCATATACAGATCACAT+TGG - chr1_1:14880535-14880554 None:intergenic 30.0%
TATATAGAACTAGCAAGACT+AGG + chr1_1:14881087-14881106 Msa0010000:intron 30.0%
CCTATAATGTAGACATTGTA+TGG - chr1_1:14881125-14881144 None:intergenic 30.0%
CCATACAATGTCTACATTAT+AGG + chr1_1:14881122-14881141 Msa0010000:intron 30.0%
CATACATGGCTATCATAAAT+AGG - chr1_1:14881176-14881195 None:intergenic 30.0%
CTATTTATGATAGCCATGTA+TGG + chr1_1:14881174-14881193 Msa0010000:intron 30.0%
GTAAAACCAATCCAACTATT+TGG - chr1_1:14881287-14881306 None:intergenic 30.0%
TGAAATGGTAATTTCTTGGA+TGG + chr1_1:14881534-14881553 Msa0010000:intron 30.0%
AAACATTAGTATGACTGTCA+AGG - chr1_1:14881648-14881667 None:intergenic 30.0%
CACCATTTAATAACAATGAG+TGG + chr1_1:14881785-14881804 Msa0010000:intron 30.0%
! GTCCACTCATTGTTATTAAA+TGG - chr1_1:14881790-14881809 None:intergenic 30.0%
TGTTCATTTACAGTATAGCA+TGG + chr1_1:14882347-14882366 Msa0010000:CDS 30.0%
AGGTATCATGTTCATAGTAT+TGG + chr1_1:14882754-14882773 Msa0010000:intron 30.0%
!! ATGTTCATAGTATTGGTTAG+TGG + chr1_1:14882761-14882780 Msa0010000:intron 30.0%
! TTTTTGTTAGGCACACTAAA+AGG + chr1_1:14882791-14882810 Msa0010000:intron 30.0%
CTCACTTATCTTATTCTTTC+AGG + chr1_1:14882928-14882947 Msa0010000:intron 30.0%
TTATCTTATTCTTTCAGGGA+AGG + chr1_1:14882933-14882952 Msa0010000:intron 30.0%
TATCTTATTCTTTCAGGGAA+GGG + chr1_1:14882934-14882953 Msa0010000:intron 30.0%
TAGAGCTGAAAAAAGAGAAT+GGG - chr1_1:14883094-14883113 None:intergenic 30.0%
ATAGAGCTGAAAAAAGAGAA+TGG - chr1_1:14883095-14883114 None:intergenic 30.0%
!! AGCTCTATTTCTATCTGAAA+AGG + chr1_1:14883107-14883126 Msa0010000:intron 30.0%
ATGAAGCCAGGAAAATTAAA+AGG - chr1_1:14883135-14883154 None:intergenic 30.0%
ATACACATTATAATGAAGCC+AGG - chr1_1:14883147-14883166 None:intergenic 30.0%
GGCTTCATTATAATGTGTAT+TGG + chr1_1:14883147-14883166 Msa0010000:CDS 30.0%
TAATGTGTATTGGAATTGCT+TGG + chr1_1:14883157-14883176 Msa0010000:CDS 30.0%
AATGTGTATTGGAATTGCTT+GGG + chr1_1:14883158-14883177 Msa0010000:CDS 30.0%
TATGTCCATCTAACTCAAAA+TGG - chr1_1:14883369-14883388 None:intergenic 30.0%
CTTCATACTAAGAAAGAAGA+AGG + chr1_1:14883520-14883539 Msa0010000:three_prime_UTR 30.0%
AAATTGAAACATAGTGTGGT+TGG - chr1_1:14883855-14883874 None:intergenic 30.0%
ACTTATTAGGAAGGATAAAG+AGG - chr1_1:14883929-14883948 None:intergenic 30.0%
ATCTCATTCAGCCAAAAATA+TGG - chr1_1:14883995-14884014 None:intergenic 30.0%
CATTAACAACTTCAACATCA+TGG - chr1_1:14884647-14884666 None:intergenic 30.0%
!! ATCGGATTTTGAAAGAACTC+AGG + chr1_1:14875164-14875183 Msa0010000:CDS 35.0%
!! TCGGATTTTGAAAGAACTCA+GGG + chr1_1:14875165-14875184 Msa0010000:CDS 35.0%
TGGTGCTTGTTTGTTCTTAT+TGG + chr1_1:14875322-14875341 Msa0010000:intron 35.0%
TTACATATCAAAGATCCACG+TGG + chr1_1:14875378-14875397 Msa0010000:intron 35.0%
AAGACATAAAATTCTCCACG+TGG - chr1_1:14875396-14875415 None:intergenic 35.0%
AATGCAGGTATGTCAAATTG+AGG + chr1_1:14875472-14875491 Msa0010000:intron 35.0%
ATGCAGGTATGTCAAATTGA+GGG + chr1_1:14875473-14875492 Msa0010000:intron 35.0%
TTGCTGAAGATATGTTTCAG+TGG + chr1_1:14876205-14876224 Msa0010000:CDS 35.0%
CGAAAAACACCATCAACATA+AGG - chr1_1:14876261-14876280 None:intergenic 35.0%
GAGTAAATGGATAATCTCGA+GGG - chr1_1:14876299-14876318 None:intergenic 35.0%
CAAGATGAATATACACACCT+TGG - chr1_1:14876325-14876344 None:intergenic 35.0%
! GCTCAATTTCTTTTCTTGGA+AGG + chr1_1:14876488-14876507 Msa0010000:intron 35.0%
CTAATCTCATTGCTTATGTG+TGG + chr1_1:14876622-14876641 Msa0010000:intron 35.0%
! CACCCAAACATTGATAGTAA+TGG + chr1_1:14876684-14876703 Msa0010000:CDS 35.0%
! GGATTTTTCTATGTCGTGTA+AGG - chr1_1:14876872-14876891 None:intergenic 35.0%
TATTACATAACGCGCTAGAA+TGG + chr1_1:14877041-14877060 Msa0010000:intron 35.0%
CTCTATTTGTTCCTTGTTGA+CGG + chr1_1:14877155-14877174 Msa0010000:intron 35.0%
TCCAAATACTGATGAGTCAT+TGG + chr1_1:14877179-14877198 Msa0010000:intron 35.0%
ACCAATGACTCATCAGTATT+TGG - chr1_1:14877183-14877202 None:intergenic 35.0%
ATGAGTCAATTGCAAGACAT+TGG + chr1_1:14877244-14877263 Msa0010000:intron 35.0%
ACATATGATATGTGTGTTGG+AGG + chr1_1:14877297-14877316 Msa0010000:intron 35.0%
GTAGAAGTTTAGTAGATGGA+TGG - chr1_1:14877390-14877409 None:intergenic 35.0%
! TTTTTACCATTTTGCCCTTG+TGG + chr1_1:14877440-14877459 Msa0010000:intron 35.0%
! TTTTACCATTTTGCCCTTGT+GGG + chr1_1:14877441-14877460 Msa0010000:intron 35.0%
TTTCGTCATTTGGTAAATGG+GGG + chr1_1:14877469-14877488 Msa0010000:intron 35.0%
GGAATGCAGCATATATATAG+GGG - chr1_1:14877501-14877520 None:intergenic 35.0%
GGGAATGCAGCATATATATA+GGG - chr1_1:14877502-14877521 None:intergenic 35.0%
TGGGAATGCAGCATATATAT+AGG - chr1_1:14877503-14877522 None:intergenic 35.0%
GTGGAGAAATGAGAGAAATA+TGG - chr1_1:14877523-14877542 None:intergenic 35.0%
! GTTTTGTAGTGAGAGAAAGT+GGG - chr1_1:14877545-14877564 None:intergenic 35.0%
! TGTTTTGTAGTGAGAGAAAG+TGG - chr1_1:14877546-14877565 None:intergenic 35.0%
! TGGAGTTTGGTGAAATTTGA+TGG - chr1_1:14877662-14877681 None:intergenic 35.0%
TCATATTTGCATGTGGAGTT+TGG - chr1_1:14877675-14877694 None:intergenic 35.0%
ATAAATCAGAATTGAGTGGG+TGG - chr1_1:14877750-14877769 None:intergenic 35.0%
ACCCACTCAATTCTGATTTA+TGG + chr1_1:14877749-14877768 Msa0010000:intron 35.0%
CACCATAAATCAGAATTGAG+TGG - chr1_1:14877754-14877773 None:intergenic 35.0%
TAGATTGTGTAGGTATGAAG+AGG + chr1_1:14877857-14877876 Msa0010000:intron 35.0%
AGATTGTGTAGGTATGAAGA+GGG + chr1_1:14877858-14877877 Msa0010000:intron 35.0%
TGCACAGTGAAAAAGAAAAG+AGG + chr1_1:14878169-14878188 Msa0010000:intron 35.0%
! TGTTATGACCACTTGCATTT+TGG + chr1_1:14878238-14878257 Msa0010000:intron 35.0%
AAGTTAGTCCAAAATGCAAG+TGG - chr1_1:14878249-14878268 None:intergenic 35.0%
!! ATAAATTTTCAGGAGGAGAG+AGG + chr1_1:14878321-14878340 Msa0010000:intron 35.0%
GCTAGCAGAATCATAATTGA+AGG + chr1_1:14878381-14878400 Msa0010000:intron 35.0%
!!! TTTTTTTTTGTGGGCTGAAC+AGG + chr1_1:14878508-14878527 Msa0010000:intron 35.0%
CTTTGCGTAGAAATGTTTGT+TGG + chr1_1:14878602-14878621 Msa0010000:intron 35.0%
TGTTTGTGCTATGAATTAGG+TGG + chr1_1:14878948-14878967 Msa0010000:intron 35.0%
! ATTTGAAACAGTGTTGTGAC+AGG - chr1_1:14879099-14879118 None:intergenic 35.0%
AACCAATGTTATAGCATAGC+GGG + chr1_1:14879230-14879249 Msa0010000:intron 35.0%
CTATTGTGAAATCAACCCTT+TGG - chr1_1:14879579-14879598 None:intergenic 35.0%
GAGATTCTTGAGAACATTGT+TGG - chr1_1:14879732-14879751 None:intergenic 35.0%
!!! AGAGTGGTTTTATGATGCAT+TGG + chr1_1:14879765-14879784 Msa0010000:intron 35.0%
! AGAGTCTACTTTGAAGAGTA+AGG + chr1_1:14879852-14879871 Msa0010000:intron 35.0%
GTGAAATTCCGAATGAGTTT+GGG + chr1_1:14880268-14880287 Msa0010000:intron 35.0%
AACAGATGACTACTTGTATG+AGG + chr1_1:14880449-14880468 Msa0010000:intron 35.0%
CACATTGGAACATAACACAT+GGG - chr1_1:14880520-14880539 None:intergenic 35.0%
TCACATTGGAACATAACACA+TGG - chr1_1:14880521-14880540 None:intergenic 35.0%
GTTCCAATGTGATCTGTATA+TGG + chr1_1:14880529-14880548 Msa0010000:intron 35.0%
CTGTATATGGTTTCCAATTG+CGG + chr1_1:14880542-14880561 Msa0010000:intron 35.0%
ACACTGCAAATTTCCATACA+TGG - chr1_1:14881190-14881209 None:intergenic 35.0%
ATGGAAATTTGCAGTGTTGT+TGG + chr1_1:14881193-14881212 Msa0010000:intron 35.0%
!! TTTTAAAGGGGCCAAATAGT+TGG + chr1_1:14881273-14881292 Msa0010000:intron 35.0%
TTACAAGTAACAAGTGATGC+AGG + chr1_1:14881303-14881322 Msa0010000:intron 35.0%
TACAAGTAACAAGTGATGCA+GGG + chr1_1:14881304-14881323 Msa0010000:intron 35.0%
! TGTCACTCAATCTGTTTTCA+TGG + chr1_1:14881338-14881357 Msa0010000:intron 35.0%
!!! ATGGTTTTATCCACTGTTGT+TGG + chr1_1:14881357-14881376 Msa0010000:intron 35.0%
! TTTGTTACTCATTGCTGACT+AGG + chr1_1:14881439-14881458 Msa0010000:intron 35.0%
! TTGTTACTCATTGCTGACTA+GGG + chr1_1:14881440-14881459 Msa0010000:intron 35.0%
ATTTACAGTGGTCTCCATAA+GGG - chr1_1:14882004-14882023 None:intergenic 35.0%
AATTTACAGTGGTCTCCATA+AGG - chr1_1:14882005-14882024 None:intergenic 35.0%
! AAACTCTGAAAAGTTTGGCA+GGG - chr1_1:14882240-14882259 None:intergenic 35.0%
! AAAACTCTGAAAAGTTTGGC+AGG - chr1_1:14882241-14882260 None:intergenic 35.0%
CACTAAAAGGAAGACATGAT+TGG + chr1_1:14882804-14882823 Msa0010000:intron 35.0%
GTTAATGAAGAGAAAGCCAA+GGG - chr1_1:14883007-14883026 None:intergenic 35.0%
! CTTGGCTTTCTCTTCATTAA+CGG + chr1_1:14883006-14883025 Msa0010000:CDS 35.0%
! TTGGCTTTCTCTTCATTAAC+GGG + chr1_1:14883007-14883026 Msa0010000:CDS 35.0%
CTGTAGTAATGTGAACATGA+TGG - chr1_1:14883054-14883073 None:intergenic 35.0%
!!! AAGGCACCTTTTAATTTTCC+TGG + chr1_1:14883126-14883145 Msa0010000:CDS 35.0%
!!! TCCTTCCATTTTGAGTTAGA+TGG + chr1_1:14883361-14883380 Msa0010000:exon 35.0%
TCCATCTAACTCAAAATGGA+AGG - chr1_1:14883365-14883384 None:intergenic 35.0%
CTTTAATTGTGCTTCTGATG+AGG + chr1_1:14883442-14883461 Msa0010000:three_prime_UTR 35.0%
GAAGAAGGAACACGATAATA+TGG + chr1_1:14883535-14883554 Msa0010000:three_prime_UTR 35.0%
TCTTGAAAGATCCTCGTTAA+TGG - chr1_1:14883664-14883683 None:intergenic 35.0%
! TTCAAGTGCAGCCATATTTT+TGG + chr1_1:14883981-14884000 Msa0010000:intron 35.0%
!! AGCAGTATTTTTGATCTAGC+AGG + chr1_1:14884236-14884255 Msa0010000:intron 35.0%
TGTACGATGGTGTTTAAACT+TGG - chr1_1:14884292-14884311 None:intergenic 35.0%
! ATATGCAAGAAAGTGTACGA+TGG - chr1_1:14884305-14884324 None:intergenic 35.0%
AGAACAAGCACAAATGTTAG+AGG + chr1_1:14884402-14884421 Msa0010000:three_prime_UTR 35.0%
GAACAAGCACAAATGTTAGA+GGG + chr1_1:14884403-14884422 Msa0010000:three_prime_UTR 35.0%
ACAAATGTTAGAGGGACAAT+GGG + chr1_1:14884411-14884430 Msa0010000:three_prime_UTR 35.0%
!! ATATCCACTTTTGCAGTGAT+AGG - chr1_1:14884468-14884487 None:intergenic 35.0%
AAAGTGGATATCTACAGCTT+TGG + chr1_1:14884477-14884496 Msa0010000:three_prime_UTR 35.0%
GTTCTATATTGGGCAAAAGA+GGG + chr1_1:14884600-14884619 Msa0010000:three_prime_UTR 35.0%
TTCTATATTGGGCAAAAGAG+GGG + chr1_1:14884601-14884620 Msa0010000:three_prime_UTR 35.0%
TAGGTTTGAGAGAATGACTA+TGG + chr1_1:14884674-14884693 Msa0010000:three_prime_UTR 35.0%
TTTGAGAGAATGACTATGGT+TGG + chr1_1:14884678-14884697 Msa0010000:three_prime_UTR 35.0%
ATGGCCTAATAGTTGGATTA+GGG - chr1_1:14884719-14884738 None:intergenic 35.0%
TATTAGGCCATCTATTGCAA+AGG + chr1_1:14884728-14884747 Msa0010000:three_prime_UTR 35.0%
AAATTTCCATCGAACAATGG+TGG - chr1_1:14884792-14884811 None:intergenic 35.0%
CTGATAGGAGAAAGAGAAAA+AGG - chr1_1:14884925-14884944 None:intergenic 35.0%
AACAGAGCAAACATACTTTG+TGG + chr1_1:14884972-14884991 Msa0010000:three_prime_UTR 35.0%
GACAACCTCTCACATATTTA+AGG - chr1_1:14884999-14885018 None:intergenic 35.0%
AGAACTCAGGGATATGCAAA+AGG + chr1_1:14875177-14875196 Msa0010000:CDS 40.0%
TGCAGGTATGTCAAATTGAG+GGG + chr1_1:14875474-14875493 Msa0010000:intron 40.0%
TCAAGAGAGTTGTGTACATG+CGG + chr1_1:14875773-14875792 Msa0010000:intron 40.0%
TTTGGATCTGTCATTGGAAG+TGG + chr1_1:14875875-14875894 Msa0010000:intron 40.0%
! TTCGATTTTATGTGGGTGCA+AGG + chr1_1:14875949-14875968 Msa0010000:intron 40.0%
GAAGATATGTTTCAGTGGCA+AGG + chr1_1:14876210-14876229 Msa0010000:CDS 40.0%
TCAACATAAGGACTATCTGG+AGG - chr1_1:14876249-14876268 None:intergenic 40.0%
CCATCAACATAAGGACTATC+TGG - chr1_1:14876252-14876271 None:intergenic 40.0%
CCAGATAGTCCTTATGTTGA+TGG + chr1_1:14876249-14876268 Msa0010000:CDS 40.0%
!!! TTGATGGTGTTTTTCGACTG+AGG + chr1_1:14876265-14876284 Msa0010000:CDS 40.0%
GGAGTAAATGGATAATCTCG+AGG - chr1_1:14876300-14876319 None:intergenic 40.0%
TTATCCATTTACTCCACCCA+AGG + chr1_1:14876305-14876324 Msa0010000:CDS 40.0%
ATGAATATACACACCTTGGG+TGG - chr1_1:14876321-14876340 None:intergenic 40.0%
TGTGTGGTGATTGATCATAC+AGG + chr1_1:14876638-14876657 Msa0010000:intron 40.0%
AGTATTTGGATCCGTCAACA+AGG - chr1_1:14877169-14877188 None:intergenic 40.0%
TCGTACATGTGAGCAATTTC+AGG - chr1_1:14877207-14877226 None:intergenic 40.0%
TTGGACTCAGAAATATGCCA+TGG + chr1_1:14877263-14877282 Msa0010000:intron 40.0%
TGGACTCAGAAATATGCCAT+GGG + chr1_1:14877264-14877283 Msa0010000:intron 40.0%
TGTTATTAGGCCTGAACACT+TGG - chr1_1:14877334-14877353 None:intergenic 40.0%
AGTAGATGGATGGAGCTTAA+TGG - chr1_1:14877380-14877399 None:intergenic 40.0%
! TTTACCATTTTGCCCTTGTG+GGG + chr1_1:14877442-14877461 Msa0010000:intron 40.0%
!! TCTAGAAGTGTCCTGAAGAA+AGG - chr1_1:14878008-14878027 None:intergenic 40.0%
CAGATTTCTGAGTTGCAAGT+AGG + chr1_1:14878205-14878224 Msa0010000:intron 40.0%
!! GTTTTATGTGTTTGCTGGTG+AGG + chr1_1:14878537-14878556 Msa0010000:intron 40.0%
GAACAATTATACAATGGCCC+TGG + chr1_1:14878868-14878887 Msa0010000:intron 40.0%
GTGGTAAGCTAATCAACATG+AGG + chr1_1:14878967-14878986 Msa0010000:intron 40.0%
ACACAAGAGTTGTCAAACTG+CGG + chr1_1:14879155-14879174 Msa0010000:intron 40.0%
ATCCCGCTATGCTATAACAT+TGG - chr1_1:14879235-14879254 None:intergenic 40.0%
CTCAAAGTCAGTAGGTTAGA+AGG + chr1_1:14879513-14879532 Msa0010000:intron 40.0%
AAGTCAGTAGGTTAGAAGGA+AGG + chr1_1:14879517-14879536 Msa0010000:intron 40.0%
TGTTCTCAAGAATCTCAGTG+AGG + chr1_1:14879736-14879755 Msa0010000:intron 40.0%
GAAGAGTAAGGTTAAGCACA+TGG + chr1_1:14879864-14879883 Msa0010000:intron 40.0%
CATGTAGATCACATGGGTTT+GGG - chr1_1:14879984-14880003 None:intergenic 40.0%
CTAAGGCATGTAGATCACAT+GGG - chr1_1:14879990-14880009 None:intergenic 40.0%
GGTGAAATTCCGAATGAGTT+TGG + chr1_1:14880267-14880286 Msa0010000:intron 40.0%
TCAAGCTTCCCAAACTCATT+CGG - chr1_1:14880279-14880298 None:intergenic 40.0%
!! AAAATTAAGTTGACGCCGCA+AGG + chr1_1:14880866-14880885 Msa0010000:intron 40.0%
TTGCGATATTGCAGCTATTG+CGG - chr1_1:14880905-14880924 None:intergenic 40.0%
CAATAGCTGCAATATCGCAA+AGG + chr1_1:14880905-14880924 Msa0010000:intron 40.0%
!!! ATGGTTTTAAAATGCAGCCG+CGG - chr1_1:14880943-14880962 None:intergenic 40.0%
AAACCATGGTTCTTTGTGCT+TGG + chr1_1:14880956-14880975 Msa0010000:intron 40.0%
! ATTTGCAGTGTTGTTGGTAG+TGG + chr1_1:14881199-14881218 Msa0010000:intron 40.0%
AGTGGCCAAAATCAATACCT+TGG + chr1_1:14881240-14881259 Msa0010000:intron 40.0%
ACAAGTAACAAGTGATGCAG+GGG + chr1_1:14881305-14881324 Msa0010000:intron 40.0%
TTAGTATGACTGTCAAGGCA+TGG - chr1_1:14881643-14881662 None:intergenic 40.0%
!! CATTAAAGAGTGTCAAGGCA+TGG - chr1_1:14881743-14881762 None:intergenic 40.0%
!! AAAAGGTATTTGTGCGAGGA+GGG + chr1_1:14881886-14881905 Msa0010000:CDS 40.0%
TTGTACACAACCATCTCAAG+AGG - chr1_1:14881927-14881946 None:intergenic 40.0%
AGACTGAGCTCTGTAACAAA+TGG + chr1_1:14881961-14881980 Msa0010000:CDS 40.0%
TGTAACAAATGGCAGGAAAC+TGG + chr1_1:14881972-14881991 Msa0010000:CDS 40.0%
TGTAAATTCGCTCACGACAT+TGG + chr1_1:14882017-14882036 Msa0010000:CDS 40.0%
GTAAATTCGCTCACGACATT+GGG + chr1_1:14882018-14882037 Msa0010000:CDS 40.0%
TAAATTCGCTCACGACATTG+GGG + chr1_1:14882019-14882038 Msa0010000:CDS 40.0%
AAATGGCATCTATGGCCATA+CGG - chr1_1:14882119-14882138 None:intergenic 40.0%
CATGACAGAAATGGCATCTA+TGG - chr1_1:14882127-14882146 None:intergenic 40.0%
CAGTAAGTGCATGACAGAAA+TGG - chr1_1:14882136-14882155 None:intergenic 40.0%
TAGCTAAAGACATACCCAAG+AGG - chr1_1:14882374-14882393 None:intergenic 40.0%
TGAGGAATGAAACTCACACA+CGG - chr1_1:14882603-14882622 None:intergenic 40.0%
GGAACACAGTCAACTTCTAA+TGG + chr1_1:14882825-14882844 Msa0010000:intron 40.0%
TGCACATATTGTATCTCCCT+TGG + chr1_1:14882988-14883007 Msa0010000:CDS 40.0%
CGTTAATGAAGAGAAAGCCA+AGG - chr1_1:14883008-14883027 None:intergenic 40.0%
TCAGAGTATGATGCTTAGAG+TGG + chr1_1:14883337-14883356 Msa0010000:CDS 40.0%
GAAGGAACACGATAATATGG+TGG + chr1_1:14883538-14883557 Msa0010000:three_prime_UTR 40.0%
TATTCCTTCTATGAGATGCC+TGG + chr1_1:14883606-14883625 Msa0010000:three_prime_UTR 40.0%
CACAAATGTTAGAGGGACAA+TGG + chr1_1:14884410-14884429 Msa0010000:three_prime_UTR 40.0%
!! GAGTTGCATCAAGTTGAAGA+TGG + chr1_1:14884540-14884559 Msa0010000:three_prime_UTR 40.0%
! CAAGTTGAAGATGGAACAGA+AGG + chr1_1:14884549-14884568 Msa0010000:three_prime_UTR 40.0%
GGTTCTATATTGGGCAAAAG+AGG + chr1_1:14884599-14884618 Msa0010000:three_prime_UTR 40.0%
TGTGCCCTAATCCAACTATT+AGG + chr1_1:14884712-14884731 Msa0010000:three_prime_UTR 40.0%
GATGGCCTAATAGTTGGATT+AGG - chr1_1:14884720-14884739 None:intergenic 40.0%
GCAATAGATGGCCTAATAGT+TGG - chr1_1:14884726-14884745 None:intergenic 40.0%
TGCAACACCTTTGCAATAGA+TGG - chr1_1:14884738-14884757 None:intergenic 40.0%
GTGGTCCTTAAATATGTGAG+AGG + chr1_1:14884991-14885010 Msa0010000:three_prime_UTR 40.0%
TCAGTGGCAAGGAGCAATTA+AGG + chr1_1:14876221-14876240 Msa0010000:CDS 45.0%
CAGTGGCAAGGAGCAATTAA+GGG + chr1_1:14876222-14876241 Msa0010000:CDS 45.0%
GGGAAAATGTCACTATTGCG+TGG + chr1_1:14876509-14876528 Msa0010000:intron 45.0%
CCTTGGATATGGTAAGAGCA+GGG - chr1_1:14876746-14876765 None:intergenic 45.0%
ACCTTGGATATGGTAAGAGC+AGG - chr1_1:14876747-14876766 None:intergenic 45.0%
GTTCTCAGTGCTTACCAAAC+TGG + chr1_1:14876917-14876936 Msa0010000:intron 45.0%
TCAGTGCTTACCAAACTGGT+GGG + chr1_1:14876921-14876940 Msa0010000:intron 45.0%
! GTTTGTTGAACCCACCAGTT+TGG - chr1_1:14876934-14876953 None:intergenic 45.0%
! TTACCATTTTGCCCTTGTGG+GGG + chr1_1:14877443-14877462 Msa0010000:intron 45.0%
TGACGAAAATACCCCCACAA+GGG - chr1_1:14877457-14877476 None:intergenic 45.0%
ATGACGAAAATACCCCCACA+AGG - chr1_1:14877458-14877477 None:intergenic 45.0%
!!! GTGGGGGTATTTTCGTCATT+TGG + chr1_1:14877459-14877478 Msa0010000:intron 45.0%
TTGTAGTGAGAGAAAGTGGG+TGG - chr1_1:14877542-14877561 None:intergenic 45.0%
TCCCTCTCTCTTCTCAAACA+CGG + chr1_1:14877613-14877632 Msa0010000:intron 45.0%
GATGGAAAGGAGAGAAGAGA+GGG - chr1_1:14877644-14877663 None:intergenic 45.0%
TGATGGAAAGGAGAGAAGAG+AGG - chr1_1:14877645-14877664 None:intergenic 45.0%
GCAACTCAGAAATCTGTCAC+TGG - chr1_1:14878201-14878220 None:intergenic 45.0%
ACTAGAGTGGGAATTGGCAA+AGG + chr1_1:14878346-14878365 Msa0010000:intron 45.0%
CTAGAGTGGGAATTGGCAAA+GGG + chr1_1:14878347-14878366 Msa0010000:intron 45.0%
! CTCAGTGAGGTATTACAGAG+TGG + chr1_1:14879749-14879768 Msa0010000:intron 45.0%
AGGTTAAGCACATGGTCAAG+AGG + chr1_1:14879872-14879891 Msa0010000:intron 45.0%
GCATGTAGATCACATGGGTT+TGG - chr1_1:14879985-14880004 None:intergenic 45.0%
GCTAAGGCATGTAGATCACA+TGG - chr1_1:14879991-14880010 None:intergenic 45.0%
!! CACAAGTAGCTCTAGATGCA+GGG - chr1_1:14880159-14880178 None:intergenic 45.0%
!! TCACAAGTAGCTCTAGATGC+AGG - chr1_1:14880160-14880179 None:intergenic 45.0%
CGTGATTACAGATAATGCCG+TGG - chr1_1:14880574-14880593 None:intergenic 45.0%
TTGGGTGCAGAAAACTACAG+AGG + chr1_1:14880659-14880678 Msa0010000:intron 45.0%
!!! GCGGCTGCATTTTAAAACCA+TGG + chr1_1:14880942-14880961 Msa0010000:intron 45.0%
ACACCAAGCACAAAGAACCA+TGG - chr1_1:14880962-14880981 None:intergenic 45.0%
AAGGGGCCAAATAGTTGGAT+TGG + chr1_1:14881278-14881297 Msa0010000:intron 45.0%
GAAAGCTACACCAACAACAG+TGG - chr1_1:14881370-14881389 None:intergenic 45.0%
TGTTGCTATGCTGCAGCAAA+AGG + chr1_1:14881869-14881888 Msa0010000:intron 45.0%
!! CAGCAAAAGGTATTTGTGCG+AGG + chr1_1:14881882-14881901 Msa0010000:intron 45.0%
!! CAAAAGGTATTTGTGCGAGG+AGG + chr1_1:14881885-14881904 Msa0010000:CDS 45.0%
TGAGATGGTTGTGTACAACC+AGG + chr1_1:14881929-14881948 Msa0010000:CDS 45.0%
GAGATGGTTGTGTACAACCA+GGG + chr1_1:14881930-14881949 Msa0010000:CDS 45.0%
AGATGGTTGTGTACAACCAG+GGG + chr1_1:14881931-14881950 Msa0010000:CDS 45.0%
TGAGCTCTGTAACAAATGGC+AGG + chr1_1:14881965-14881984 Msa0010000:CDS 45.0%
TGTCGTGAGCGAATTTACAG+TGG - chr1_1:14882016-14882035 None:intergenic 45.0%
!!! AGACCTCAGTTTTGTTGCGT+GGG - chr1_1:14882067-14882086 None:intergenic 45.0%
AATGGCATCTATGGCCATAC+GGG - chr1_1:14882118-14882137 None:intergenic 45.0%
ACAGTATAGCATGGTCCTCT+TGG + chr1_1:14882356-14882375 Msa0010000:CDS 45.0%
CAGTATAGCATGGTCCTCTT+GGG + chr1_1:14882357-14882376 Msa0010000:CDS 45.0%
GAGAACATTGCAGCAGCATA+AGG - chr1_1:14882558-14882577 None:intergenic 45.0%
GAACATGATACCTGCTCACA+GGG - chr1_1:14882747-14882766 None:intergenic 45.0%
TGAACATGATACCTGCTCAC+AGG - chr1_1:14882748-14882767 None:intergenic 45.0%
! TCTCTTCATTAACGGGTGAG+TGG + chr1_1:14883014-14883033 Msa0010000:intron 45.0%
GTGCTTCTGATGAGGAAGAA+AGG + chr1_1:14883450-14883469 Msa0010000:three_prime_UTR 45.0%
AATGCCAGGCATCTCATAGA+AGG - chr1_1:14883613-14883632 None:intergenic 45.0%
AGATCCTCGTTAATGGCAAC+AGG - chr1_1:14883657-14883676 None:intergenic 45.0%
! GATAAAGAGGTGTGACAGCA+AGG - chr1_1:14883916-14883935 None:intergenic 45.0%
TCACTGTCGAGAAAGATGCT+CGG - chr1_1:14884083-14884102 None:intergenic 45.0%
TAGAGGGACAATGGGATGTT+TGG + chr1_1:14884419-14884438 Msa0010000:three_prime_UTR 45.0%
!! GGTGCATTTTTGAGCCATTC+TGG - chr1_1:14884447-14884466 None:intergenic 45.0%
TGCACCTATCACTGCAAAAG+TGG + chr1_1:14884461-14884480 Msa0010000:three_prime_UTR 45.0%
GTTGAAGATGGAACAGAAGG+TGG + chr1_1:14884552-14884571 Msa0010000:three_prime_UTR 45.0%
GAATGACTATGGTTGGACTG+TGG + chr1_1:14884685-14884704 Msa0010000:three_prime_UTR 45.0%
!! TGCAAAGGTGTTGCAGATGT+CGG + chr1_1:14884743-14884762 Msa0010000:three_prime_UTR 45.0%
AGTGTTCCACCATTGTTCGA+TGG + chr1_1:14884783-14884802 Msa0010000:three_prime_UTR 45.0%
!! AAATAAATACAATTATTAAA+CGG - chr1_1:14875534-14875553 None:intergenic 5.0%
!!! ATTTACTATTATTTATTTTA+TGG - chr1_1:14880827-14880846 None:intergenic 5.0%
CCAGCACTGCAAGAAATGAG+AGG - chr1_1:14875205-14875224 None:intergenic 50.0%
CCTCTCATTTCTTGCAGTGC+TGG + chr1_1:14875202-14875221 Msa0010000:CDS 50.0%
AAGTGGACAGGGACAAATGC+AGG + chr1_1:14875457-14875476 Msa0010000:intron 50.0%
CACACCTTGGGTGGAGTAAA+TGG - chr1_1:14876312-14876331 None:intergenic 50.0%
CCCTGCTCTTACCATATCCA+AGG + chr1_1:14876743-14876762 Msa0010000:CDS 50.0%
CTCAGTGCTTACCAAACTGG+TGG + chr1_1:14876920-14876939 Msa0010000:intron 50.0%
ATACCCCCACAAGGGCAAAA+TGG - chr1_1:14877449-14877468 None:intergenic 50.0%
GAAGAGAGAGGGATGAGAGA+TGG - chr1_1:14877606-14877625 None:intergenic 50.0%
GCCGTGTTTGAGAAGAGAGA+GGG - chr1_1:14877617-14877636 None:intergenic 50.0%
AGCCGTGTTTGAGAAGAGAG+AGG - chr1_1:14877618-14877637 None:intergenic 50.0%
AGGAGAGAGGACACTAGAGT+GGG + chr1_1:14878334-14878353 Msa0010000:intron 50.0%
GAGGACACTAGAGTGGGAAT+TGG + chr1_1:14878340-14878359 Msa0010000:intron 50.0%
GGTGTGTATTGTCGTCCTTG+CGG - chr1_1:14880884-14880903 None:intergenic 50.0%
TTAAAATGCAGCCGCGGTTG+CGG - chr1_1:14880937-14880956 None:intergenic 50.0%
ATGACTGTCAAGGCATGGCA+AGG - chr1_1:14881638-14881657 None:intergenic 50.0%
AGAGGAAGAGCCTCTTGAGA+TGG + chr1_1:14881914-14881933 Msa0010000:CDS 50.0%
GAAACTGGCACATGCCCTTA+TGG + chr1_1:14881987-14882006 Msa0010000:CDS 50.0%
!!! CAGACCTCAGTTTTGTTGCG+TGG - chr1_1:14882068-14882087 None:intergenic 50.0%
GCAACAAAACTGAGGTCTGC+AGG + chr1_1:14882069-14882088 Msa0010000:intron 50.0%
CAAAACTGAGGTCTGCAGGA+TGG + chr1_1:14882073-14882092 Msa0010000:intron 50.0%
ACAAGATGATCCCTGTGAGC+AGG + chr1_1:14882734-14882753 Msa0010000:CDS 50.0%
AGGGCTCATGTTTGCATCTC+AGG + chr1_1:14882953-14882972 Msa0010000:CDS 50.0%
! GGCATTTGGCTCATAATGCC+AGG - chr1_1:14883627-14883646 None:intergenic 50.0%
TTAATGGCAACAGGCAGTGG+CGG - chr1_1:14883648-14883667 None:intergenic 50.0%
TCGTTAATGGCAACAGGCAG+TGG - chr1_1:14883651-14883670 None:intergenic 50.0%
ACTGCCTGTTGCCATTAACG+AGG + chr1_1:14883650-14883669 Msa0010000:three_prime_UTR 50.0%
TGGGATGTTTGGCACCAGAA+TGG + chr1_1:14884430-14884449 Msa0010000:three_prime_UTR 50.0%
!! AAGGTGTTGCAGATGTCGGA+AGG + chr1_1:14884747-14884766 Msa0010000:three_prime_UTR 50.0%
GAGGAGAGAGGACACTAGAG+TGG + chr1_1:14878333-14878352 Msa0010000:intron 55.0%
TCCAATTGCGGATGCTGCCA+CGG + chr1_1:14880554-14880573 Msa0010000:intron 55.0%
AAACCGCAACGCCGTAACGA+GGG + chr1_1:14880634-14880653 Msa0010000:intron 55.0%
!! AACGCCGTAACGAGGGCATT+GGG + chr1_1:14880641-14880660 Msa0010000:intron 55.0%
TGCACCCAATGCCCTCGTTA+CGG - chr1_1:14880648-14880667 None:intergenic 55.0%
AGGTATTTGTGCGAGGAGGG+CGG + chr1_1:14881889-14881908 Msa0010000:CDS 55.0%
GCTCAGTCTTGAACATCCCC+TGG - chr1_1:14881950-14881969 None:intergenic 55.0%
!!! CAGTTTTGTTGCGTGGGTGG+CGG - chr1_1:14882061-14882080 None:intergenic 55.0%
!!! CCTCAGTTTTGTTGCGTGGG+TGG - chr1_1:14882064-14882083 None:intergenic 55.0%
CCACCCACGCAACAAAACTG+AGG + chr1_1:14882061-14882080 Msa0010000:CDS 55.0%
TCTGCAGGATGGTCCTTGCT+GGG + chr1_1:14882084-14882103 Msa0010000:intron 55.0%
! CGAGAAAGATGCTCGGTGAG+TGG - chr1_1:14884076-14884095 None:intergenic 55.0%
GAAACCGCAACGCCGTAACG+AGG + chr1_1:14880633-14880652 Msa0010000:intron 60.0%
ATGCCCTCGTTACGGCGTTG+CGG - chr1_1:14880640-14880659 None:intergenic 60.0%
! CAACGCCGTAACGAGGGCAT+TGG + chr1_1:14880640-14880659 Msa0010000:intron 60.0%
AAAGGCAGCAACCGCAACCG+CGG + chr1_1:14880923-14880942 Msa0010000:intron 60.0%
CTGTCAAGGCATGGCAAGGC+AGG - chr1_1:14881634-14881653 None:intergenic 60.0%
!! TGCGTGGGTGGCGGATCATT+GGG - chr1_1:14882052-14882071 None:intergenic 60.0%
!! TTGCGTGGGTGGCGGATCAT+TGG - chr1_1:14882053-14882072 None:intergenic 60.0%
GTCTGCAGGATGGTCCTTGC+TGG + chr1_1:14882083-14882102 Msa0010000:intron 60.0%
CTGCAGGATGGTCCTTGCTG+GGG + chr1_1:14882085-14882104 Msa0010000:intron 60.0%
CAACAGGCAGTGGCGGCATT+TGG - chr1_1:14883641-14883660 None:intergenic 60.0%
! GATGCTCGGTGAGTGGTGAC+AGG - chr1_1:14884069-14884088 None:intergenic 60.0%
GCCGTGGCAGCATCCGCAAT+TGG - chr1_1:14880558-14880577 None:intergenic 65.0%
TGTGCGAGGAGGGCGGAAAG+AGG + chr1_1:14881896-14881915 Msa0010000:CDS 65.0%
ACGGGCACACAACCCCAGCA+AGG - chr1_1:14882100-14882119 None:intergenic 65.0%
GCTGGGGTTGTGTGCCCGTA+TGG + chr1_1:14882101-14882120 Msa0010000:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 14875154 14885064 14875154 ID=Msa0010000;Name=Msa0010000
chr1_1 mRNA 14875154 14885064 14875154 ID=Msa0010000-mRNA-1;Parent=Msa0010000;Name=Msa0010000-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.6|0.63|0.90|0.9|0.81|11|1135|278
chr1_1 exon 14875154 14875223 14875154 ID=Msa0010000-mRNA-1:exon:5485;Parent=Msa0010000-mRNA-1
chr1_1 exon 14876199 14876326 14876199 ID=Msa0010000-mRNA-1:exon:5486;Parent=Msa0010000-mRNA-1
chr1_1 exon 14876660 14876764 14876660 ID=Msa0010000-mRNA-1:exon:5487;Parent=Msa0010000-mRNA-1
chr1_1 exon 14881885 14882082 14881885 ID=Msa0010000-mRNA-1:exon:5488;Parent=Msa0010000-mRNA-1
chr1_1 exon 14882346 14882378 14882346 ID=Msa0010000-mRNA-1:exon:5489;Parent=Msa0010000-mRNA-1
chr1_1 exon 14882552 14882605 14882552 ID=Msa0010000-mRNA-1:exon:5490;Parent=Msa0010000-mRNA-1
chr1_1 exon 14882714 14882755 14882714 ID=Msa0010000-mRNA-1:exon:5491;Parent=Msa0010000-mRNA-1
chr1_1 exon 14882950 14883028 14882950 ID=Msa0010000-mRNA-1:exon:5492;Parent=Msa0010000-mRNA-1
chr1_1 exon 14883109 14883179 14883109 ID=Msa0010000-mRNA-1:exon:5493;Parent=Msa0010000-mRNA-1
chr1_1 exon 14883323 14883707 14883323 ID=Msa0010000-mRNA-1:exon:5494;Parent=Msa0010000-mRNA-1
chr1_1 exon 14884258 14885064 14884258 ID=Msa0010000-mRNA-1:exon:5495;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14875154 14875223 14875154 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14876199 14876326 14876199 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14876660 14876764 14876660 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14881885 14882082 14881885 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14882346 14882378 14882346 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14882552 14882605 14882552 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14882714 14882755 14882714 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14882950 14883028 14882950 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14883109 14883179 14883109 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 CDS 14883323 14883379 14883323 ID=Msa0010000-mRNA-1:cds;Parent=Msa0010000-mRNA-1
chr1_1 three_prime_UTR 14883380 14883707 14883380 ID=Msa0010000-mRNA-1:three_prime_utr;Parent=Msa0010000-mRNA-1
chr1_1 three_prime_UTR 14884258 14885064 14884258 ID=Msa0010000-mRNA-1:three_prime_utr;Parent=Msa0010000-mRNA-1
Gene Sequence

>Msa0010000

ATGGCTTCAAATCGGATTTTGAAAGAACTCAGGGATATGCAAAAGGATCCTCTCATTTCTTGCAGTGCTGGTCCTATTGCTGAAGATATGTTTCAGTGGCAAGGAGCAATTAAGGGTCCTCCAGATAGTCCTTATGTTGATGGTGTTTTTCGACTGAGGATTCGTTTCCCTCGAGATTATCCATTTACTCCACCCAAGGTTATATTCTTGACAAAGGTCTTTCACCCAAACATTGATAGTAATGGAAACATTTGGATTGATATATTAAAGGATCAGTGGAGCCCTGCTCTTACCATATCCAAGCAAAAGGTATTTGTGCGAGGAGGGCGGAAAGAGGAAGAGCCTCTTGAGATGGTTGTGTACAACCAGGGGATGTTCAAGACTGAGCTCTGTAACAAATGGCAGGAAACTGGCACATGCCCTTATGGAGACCACTGTAAATTCGCTCACGACATTGGGGAGCTTCGCCCAATGATCCGCCACCCACGCAACAAAACTGAGATGTTCATTTACAGTATAGCATGGTCCTCTTGGGTTCCTTATGCTGCTGCAATGTTCTCAATTTTGTTTGTATTTTCACAGCCGTGTATACGAAGTATTGTTTCTAAACAAGATGATCCCTGTGAGCAGGGAAGGGCTCATGTTTGCATCTCAGGCATATGTTCGATTGCACATATTGTATCTCCCTTGGCTTTCTCTTCATTAACGGCTCTATTTCTATCTGAAAAGGCACCTTTTAATTTTCCTGGCTTCATTATAATGTGTATTGGAATTGCTTGGATGGTATCTTTTGTTCAGAGTATGATGCTTAGAGTGGTTCCTTCCATTTTGAGTTAG
Protein sequence

>Msa0010000

MASNRILKELRDMQKDPLISCSAGPIAEDMFQWQGAIKGPPDSPYVDGVFRLRIRFPRDYPFTPPKVIFLTKVFHPNIDSNGNIWIDILKDQWSPALTISKQKVFVRGGRKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCKFAHDIGELRPMIRHPRNKTEMFIYSIAWSSWVPYAAAMFSILFVFSQPCIRSIVSKQDDPCEQGRAHVCISGICSIAHIVSPLAFSSLTALFLSEKAPFNFPGFIIMCIGIAWMVSFVQSMMLRVVPSILS*