AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0012610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012610 MtrunA17_Chr8g0381541 62.069 493 178 3 1 485 1 492 0.0 655
Msa0012610 MtrunA17_Chr8g0381571 60.954 461 171 3 1 453 1 460 0.0 600
Msa0012610 MtrunA17_Chr8g0339861 55.556 495 204 7 1 485 1 489 0.0 551
Msa0012610 MtrunA17_Chr5g0400421 54.065 492 211 5 3 483 4 491 0.0 540
Msa0012610 MtrunA17_Chr1g0161671 75.851 323 64 2 1 320 1 312 7.38e-175 493
Msa0012610 MtrunA17_Chr5g0400411 51.020 490 228 6 3 483 4 490 5.81e-169 485
Msa0012610 MtrunA17_Chr2g0293421 46.598 485 252 4 6 485 9 491 6.39e-163 470
Msa0012610 MtrunA17_Chr2g0293411 45.175 487 259 3 6 485 5 490 4.78e-162 468
Msa0012610 MtrunA17_Chr1g0161651 65.312 320 67 3 1 276 1 320 1.34e-138 402
Msa0012610 MtrunA17_Chr8g0381551 57.317 328 131 3 1 320 1 327 2.95e-138 401
Msa0012610 MtrunA17_Chr4g0000171 52.134 328 144 6 1 320 1 323 8.20e-114 339
Msa0012610 MtrunA17_Chr4g0000161 50.305 328 150 5 1 320 1 323 7.36e-107 321
Msa0012610 MtrunA17_Chr4g0013471 50.000 334 154 5 1 326 1 329 1.65e-106 323
Msa0012610 MtrunA17_Chr1g0161691 91.304 138 12 0 99 236 1 138 9.58e-88 265
Msa0012610 MtrunA17_Chr5g0408181 33.784 444 276 10 12 453 7 434 1.39e-74 242
Msa0012610 MtrunA17_Chr1g0153371 32.604 457 294 9 32 485 27 472 2.28e-74 242
Msa0012610 MtrunA17_Chr4g0044851 31.881 436 286 6 40 474 37 462 5.61e-72 235
Msa0012610 MtrunA17_Chr3g0089361 29.978 457 308 8 27 478 24 473 8.33e-72 235
Msa0012610 MtrunA17_Chr7g0226771 31.555 431 283 6 38 464 31 453 5.50e-71 233
Msa0012610 MtrunA17_Chr8g0341951 30.531 452 299 7 6 453 5 445 1.77e-67 224
Msa0012610 MtrunA17_Chr3g0078411 30.819 464 282 13 8 458 4 441 2.66e-67 223
Msa0012610 MtrunA17_Chr6g0455461 31.116 466 282 13 8 460 4 443 3.11e-67 223
Msa0012610 MtrunA17_Chr8g0369791 32.648 438 277 10 39 474 36 457 1.00e-66 221
Msa0012610 MtrunA17_Chr4g0044841 31.905 420 269 7 40 455 38 444 5.35e-66 220
Msa0012610 MtrunA17_Chr5g0403931 31.403 449 284 11 32 467 28 465 1.70e-64 216
Msa0012610 MtrunA17_Chr6g0478161 28.538 431 287 10 40 460 50 469 6.63e-62 209
Msa0012610 MtrunA17_Chr7g0219961 29.630 459 299 12 7 460 3 442 8.50e-62 208
Msa0012610 MtrunA17_Chr8g0388921 28.246 439 308 5 40 474 34 469 1.89e-61 208
Msa0012610 MtrunA17_Chr3g0113321 29.245 424 286 6 32 449 21 436 4.54e-61 207
Msa0012610 MtrunA17_Chr1g0164371 31.130 469 305 9 12 479 22 473 5.32e-61 207
Msa0012610 MtrunA17_Chr3g0089351 27.861 402 283 5 81 482 1 395 3.37e-60 202
Msa0012610 MtrunA17_Chr4g0000151 65.926 135 45 1 351 485 12 145 3.86e-60 194
Msa0012610 MtrunA17_Chr8g0372411 30.445 427 268 11 41 453 40 451 1.43e-58 200
Msa0012610 MtrunA17_Chr5g0397971 27.632 456 307 10 6 453 2 442 3.40e-58 199
Msa0012610 MtrunA17_Chr3g0107511 27.626 438 307 6 40 471 33 466 5.17e-56 194
Msa0012610 MtrunA17_Chr8g0373441 32.481 391 245 10 31 412 24 404 1.22e-55 191
Msa0012610 MtrunA17_Chr3g0107501 27.664 441 303 7 40 471 33 466 1.50e-54 190
Msa0012610 MtrunA17_Chr5g0443401 27.790 439 300 9 40 471 38 466 1.31e-53 187
Msa0012610 MtrunA17_Chr8g0380471 25.833 480 338 8 1 474 1 468 2.68e-50 178
Msa0012610 MtrunA17_Chr8g0381561 66.364 110 37 0 344 453 2 111 4.93e-49 164
Msa0012610 MtrunA17_Chr8g0372711 28.054 442 291 10 42 464 48 481 1.94e-47 171
Msa0012610 MtrunA17_Chr3g0141801 27.865 445 304 11 27 463 29 464 6.01e-47 169
Msa0012610 MtrunA17_Chr5g0443731 24.439 446 325 10 40 479 29 468 8.98e-46 166
Msa0012610 MtrunA17_Chr8g0380931 24.609 447 314 11 40 474 62 497 6.23e-44 161
Msa0012610 MtrunA17_Chr1g0161661 76.404 89 21 0 394 482 12 100 6.83e-44 150
Msa0012610 MtrunA17_Chr1g0161641 75.949 79 19 0 375 453 10 88 1.10e-36 130
Msa0012610 MtrunA17_Chr5g0400391 64.368 87 31 0 395 481 1 87 1.48e-35 128
Msa0012610 MtrunA17_Chr8g0356001 24.775 444 276 15 32 437 32 455 1.32e-26 112
Msa0012610 MtrunA17_Chr5g0445421 23.758 463 294 17 12 448 88 517 4.44e-26 111
Msa0012610 MtrunA17_Chr5g0445451 24.116 481 295 16 12 452 14 464 2.05e-25 108
Msa0012610 MtrunA17_Chr5g0405001 24.667 450 278 15 41 449 45 474 6.57e-25 107
Msa0012610 MtrunA17_Chr8g0372251 26.126 444 265 17 32 433 28 450 9.11e-25 107
Msa0012610 MtrunA17_Chr5g0445381 23.769 467 311 19 12 448 44 495 1.63e-24 106
Msa0012610 MtrunA17_Chr8g0355961 23.142 471 295 16 8 437 11 455 1.65e-24 106
Msa0012610 MtrunA17_Chr3g0116741 23.059 438 287 12 29 433 40 460 1.75e-24 106
Msa0012610 MtrunA17_Chr5g0437001 37.121 132 80 1 345 473 1 132 2.44e-24 99.0
Msa0012610 MtrunA17_Chr5g0395321 23.647 499 299 18 3 455 4 466 6.96e-24 104
Msa0012610 MtrunA17_Chr7g0235551 24.025 487 305 18 1 445 2 465 3.93e-23 102
Msa0012610 MtrunA17_Chr1g0205361 25.280 447 267 21 32 437 26 446 4.36e-23 102
Msa0012610 MtrunA17_Chr7g0255531 23.679 473 301 20 28 459 17 470 5.53e-23 102
Msa0012610 MtrunA17_Chr5g0430031 24.694 490 302 23 9 454 6 472 6.57e-23 101
Msa0012610 MtrunA17_Chr3g0116681 23.819 487 305 18 14 461 15 474 6.77e-23 101
Msa0012610 MtrunA17_Chr5g0431671 26.351 444 276 18 40 448 38 465 8.41e-23 101
Msa0012610 MtrunA17_Chr5g0445441 22.796 465 317 17 12 448 55 505 1.51e-22 100
Msa0012610 MtrunA17_Chr5g0404861 34.307 137 80 2 325 455 2 134 1.64e-22 94.0
Msa0012610 MtrunA17_Chr4g0058231 23.554 484 316 16 9 455 2 468 1.94e-22 100
Msa0012610 MtrunA17_Chr1g0198191 21.031 485 315 15 15 453 20 482 2.03e-22 100
Msa0012610 MtrunA17_Chr4g0058191 27.211 441 272 19 24 434 15 436 3.53e-22 99.4
Msa0012610 MtrunA17_Chr1g0161681 54.945 91 12 2 395 485 1 62 4.84e-22 89.4
Msa0012610 MtrunA17_Chr3g0084921 25.393 445 266 17 40 437 35 460 1.15e-21 97.8
Msa0012610 MtrunA17_Chr5g0431641 25.342 438 287 16 40 448 38 464 1.16e-21 97.8
Msa0012610 MtrunA17_Chr5g0445461 23.028 469 311 18 12 448 14 464 1.78e-21 97.4
Msa0012610 MtrunA17_Chr5g0395381 24.230 487 286 20 3 455 4 441 1.81e-21 97.1
Msa0012610 MtrunA17_Chr2g0310391 22.852 512 325 22 9 476 1 486 2.24e-21 97.1
Msa0012610 MtrunA17_Chr8g0344151 25.926 459 268 18 38 448 34 468 2.29e-21 97.1
Msa0012610 MtrunA17_Chr1g0160851 24.224 483 303 20 7 455 11 464 2.41e-21 97.1
Msa0012610 MtrunA17_Chr4g0024771 23.451 452 308 16 41 464 39 480 2.42e-21 97.1
Msa0012610 MtrunA17_Chr5g0430081 24.576 472 291 22 12 441 7 455 2.49e-21 97.1
Msa0012610 MtrunA17_Chr4g0058281 23.820 466 304 16 29 458 35 485 2.55e-21 97.1
Msa0012610 MtrunA17_Chr6g0458561 23.568 454 291 15 43 457 66 502 3.22e-21 96.7
Msa0012610 MtrunA17_Chr8g0361471 26.068 468 251 20 40 448 34 465 3.23e-21 96.7
Msa0012610 MtrunA17_Chr4g0047631 23.941 472 312 18 9 448 20 476 3.61e-21 96.3
Msa0012610 MtrunA17_Chr5g0401691 22.697 445 307 14 40 460 51 482 4.55e-21 96.3
Msa0012610 MtrunA17_Chr4g0058261 23.894 452 296 16 37 454 62 499 4.70e-21 96.3
Msa0012610 MtrunA17_Chr3g0101611 24.396 455 289 16 40 458 38 473 5.88e-21 95.9
Msa0012610 MtrunA17_Chr3g0089291 22.594 239 181 3 81 319 1 235 6.80e-21 91.7
Msa0012610 MtrunA17_Chr2g0310381 23.301 515 325 22 9 479 1 489 6.95e-21 95.5
Msa0012610 MtrunA17_Chr4g0035921 22.013 477 306 14 29 458 26 483 8.54e-21 95.1
Msa0012610 MtrunA17_Chr6g0451781 22.607 491 309 18 46 475 80 560 1.24e-20 95.1
Msa0012610 MtrunA17_Chr4g0058201 25.714 455 291 19 26 448 17 456 2.01e-20 94.0
Msa0012610 MtrunA17_Chr8g0344181 25.641 468 268 21 38 454 36 474 2.19e-20 94.0
Msa0012610 MtrunA17_Chr5g0395331 23.493 481 282 18 29 455 25 473 2.53e-20 94.0
Msa0012610 MtrunA17_Chr1g0197851 25.688 436 273 19 34 437 28 444 2.68e-20 93.6
Msa0012610 MtrunA17_Chr8g0344191 24.646 495 296 21 6 454 43 506 2.81e-20 94.0
Msa0012610 MtrunA17_Chr1g0197881 25.688 436 273 19 34 437 27 443 3.04e-20 93.6
Msa0012610 MtrunA17_Chr4g0053621 22.020 495 317 19 9 460 1 469 3.87e-20 93.2
Msa0012610 MtrunA17_Chr3g0101721 22.560 461 293 18 32 448 27 467 4.68e-20 92.8
Msa0012610 MtrunA17_Chr5g0430131 23.109 476 308 19 12 449 9 464 4.97e-20 92.8
Msa0012610 MtrunA17_Chr5g0445531 23.371 445 286 17 40 448 38 463 5.38e-20 92.8
Msa0012610 MtrunA17_Chr4g0052851 23.312 459 291 17 34 460 27 456 5.77e-20 92.8
Msa0012610 MtrunA17_Chr5g0401681 22.222 459 294 17 40 460 32 465 5.79e-20 92.8
Msa0012610 MtrunA17_Chr1g0197891 25.000 464 287 21 6 437 10 444 6.23e-20 92.4
Msa0012610 MtrunA17_Chr6g0451681 21.290 465 293 18 18 460 37 450 8.52e-20 92.0
Msa0012610 MtrunA17_Chr1g0205371 24.280 486 302 23 7 455 11 467 1.01e-19 92.0
Msa0012610 MtrunA17_Chr2g0314721 29.752 242 154 7 238 467 254 491 1.18e-19 91.7
Msa0012610 MtrunA17_Chr5g0403321 23.644 461 292 16 32 448 26 470 1.37e-19 91.7
Msa0012610 MtrunA17_Chr1g0174441 22.152 474 314 16 2 437 22 478 1.88e-19 91.3
Msa0012610 MtrunA17_Chr6g0451811 27.358 212 128 6 286 475 1 208 2.25e-19 86.7
Msa0012610 MtrunA17_Chr6g0451641 22.845 464 290 20 41 454 39 484 2.72e-19 90.9
Msa0012610 MtrunA17_Chr8g0339331 24.893 466 292 20 30 455 36 483 3.56e-19 90.5
Msa0012610 MtrunA17_Chr1g0174451 22.874 494 320 17 32 476 28 509 3.83e-19 90.1
Msa0012610 MtrunA17_Chr5g0430101 22.432 477 313 17 10 449 6 462 3.97e-19 90.1
Msa0012610 MtrunA17_Chr4g0011961 23.457 486 303 21 9 452 1 459 4.83e-19 89.7
Msa0012610 MtrunA17_Chr6g0465511 25.641 468 253 20 40 448 34 465 6.31e-19 89.4
Msa0012610 MtrunA17_Chr5g0431511 24.222 450 294 16 40 455 33 469 6.88e-19 89.4
Msa0012610 MtrunA17_Chr1g0164211 22.883 437 281 15 37 437 27 443 7.45e-19 89.4
Msa0012610 MtrunA17_Chr7g0246221 23.529 459 280 16 40 452 34 467 7.82e-19 89.4
Msa0012610 MtrunA17_Chr6g0463551 28.415 183 113 3 206 377 14 189 8.57e-19 84.7
Msa0012610 MtrunA17_Chr8g0346261 28.139 231 149 6 239 458 296 520 9.60e-19 89.0
Msa0012610 MtrunA17_Chr6g0466331 25.427 468 254 20 40 448 34 465 1.20e-18 88.6
Msa0012610 MtrunA17_Chr6g0463541 46.429 84 44 1 377 460 6 88 1.27e-18 81.3
Msa0012610 MtrunA17_Chr8g0390881 22.642 477 306 18 15 448 12 468 1.29e-18 88.6
Msa0012610 MtrunA17_Chr1g0176831 27.273 242 160 6 238 467 273 510 1.33e-18 88.6
Msa0012610 MtrunA17_Chr4g0046331 21.963 428 283 11 72 459 63 479 1.43e-18 88.6
Msa0012610 MtrunA17_Chr4g0039901 22.777 461 284 18 40 455 35 468 1.44e-18 88.2
Msa0012610 MtrunA17_Chr5g0403351 22.360 483 313 18 10 448 3 467 1.70e-18 88.2
Msa0012610 MtrunA17_Chr3g0101631 22.494 449 284 17 40 448 36 460 1.72e-18 88.2
Msa0012610 MtrunA17_Chr6g0463801 23.651 482 311 16 1 449 1 458 1.92e-18 88.2
Msa0012610 MtrunA17_Chr3g0101831 24.130 460 286 20 32 448 27 466 2.06e-18 87.8
Msa0012610 MtrunA17_Chr3g0101621 24.565 460 269 18 40 454 33 459 2.15e-18 87.8
Msa0012610 MtrunA17_Chr4g0046351 21.378 421 284 10 72 455 63 473 2.58e-18 87.8
Msa0012610 MtrunA17_Chr7g0218601 23.371 445 300 15 40 455 34 466 2.89e-18 87.4
Msa0012610 MtrunA17_Chr3g0101801 23.596 445 294 16 38 448 40 472 3.17e-18 87.4
Msa0012610 MtrunA17_Chr5g0430091 25.577 477 292 21 15 448 12 468 3.79e-18 87.0
Msa0012610 MtrunA17_Chr1g0162801 21.677 489 320 17 1 448 1 467 6.17e-18 86.7
Msa0012610 MtrunA17_Chr6g0451741 20.256 469 317 14 41 461 61 520 6.40e-18 86.7
Msa0012610 MtrunA17_Chr3g0089381 24.855 173 124 2 209 377 22 192 6.66e-18 82.4
Msa0012610 MtrunA17_Chr5g0431591 27.727 220 141 8 243 448 67 282 7.51e-18 84.3
Msa0012610 MtrunA17_Chr8g0364651 21.569 459 312 14 40 463 30 475 8.47e-18 85.9
Msa0012610 MtrunA17_Chr1g0197871 24.109 477 301 20 32 467 26 482 8.79e-18 85.9
Msa0012610 MtrunA17_Chr2g0314731 27.686 242 159 6 238 467 243 480 9.23e-18 85.9
Msa0012610 MtrunA17_Chr8g0334891 21.622 444 302 13 40 459 38 459 1.02e-17 85.9
Msa0012610 MtrunA17_Chr4g0017411 28.767 219 148 4 243 460 242 453 1.07e-17 85.5
Msa0012610 MtrunA17_Chr6g0466941 22.526 475 290 19 34 448 27 483 1.14e-17 85.9
Msa0012610 MtrunA17_Chr4g0046321 21.911 429 288 10 72 463 63 481 1.19e-17 85.5
Msa0012610 MtrunA17_Chr5g0419691 23.935 493 309 20 34 480 23 495 1.40e-17 85.5
Msa0012610 MtrunA17_Chr4g0076161 21.935 465 306 17 24 448 20 467 2.47e-17 84.7
Msa0012610 MtrunA17_Chr5g0446151 21.397 458 282 12 40 452 41 465 2.49e-17 84.7
Msa0012610 MtrunA17_Chr8g0382901 23.632 457 278 20 27 448 19 439 2.65e-17 85.1
Msa0012610 MtrunA17_Chr8g0382901 20.734 463 299 18 27 448 483 918 7.54e-13 71.2
Msa0012610 MtrunA17_Chr2g0296661 25.116 215 155 3 243 456 257 466 2.73e-17 84.3
Msa0012610 MtrunA17_Chr1g0174481 21.495 428 294 11 41 437 35 451 2.75e-17 84.3
Msa0012610 MtrunA17_Chr7g0218611 27.536 207 140 4 255 455 265 467 2.88e-17 84.3
Msa0012610 MtrunA17_Chr3g0135841 25.304 494 267 22 32 452 39 503 3.15e-17 84.3
Msa0012610 MtrunA17_Chr4g0011871 24.784 464 285 21 34 455 23 464 3.70e-17 84.0
Msa0012610 MtrunA17_Chr3g0101751 22.944 462 276 17 38 448 40 472 4.26e-17 84.0
Msa0012610 MtrunA17_Chr6g0451691 20.256 469 316 13 41 460 42 501 4.31e-17 84.0
Msa0012610 MtrunA17_Chr5g0404881 29.469 207 138 6 30 234 27 227 6.51e-17 80.1
Msa0012610 MtrunA17_Chr2g0280071 22.699 489 314 19 7 452 36 503 6.90e-17 83.6
Msa0012610 MtrunA17_Chr4g0052881 25.112 223 159 4 239 460 251 466 8.02e-17 82.8
Msa0012610 MtrunA17_Chr7g0215181 22.864 398 265 11 74 445 90 471 8.17e-17 83.2
Msa0012610 MtrunA17_Chr3g0101821 22.587 487 301 19 12 448 5 465 8.99e-17 82.8
Msa0012610 MtrunA17_Chr1g0160861 27.876 226 148 6 239 455 86 305 1.04e-16 81.3
Msa0012610 MtrunA17_Chr3g0101671 23.632 457 276 20 40 448 38 469 1.25e-16 82.4
Msa0012610 MtrunA17_Chr8g0334941 25.214 234 160 4 236 459 76 304 1.91e-16 80.5
Msa0012610 MtrunA17_Chr4g0052861 21.856 485 322 18 8 460 6 465 2.51e-16 81.3
Msa0012610 MtrunA17_Chr5g0446161 21.225 457 283 12 40 452 41 464 2.80e-16 81.3
Msa0012610 MtrunA17_Chr4g0047661 22.345 452 286 18 24 433 34 462 2.96e-16 81.3
Msa0012610 MtrunA17_Chr8g0357421 23.620 453 296 18 32 448 27 465 3.16e-16 81.3
Msa0012610 MtrunA17_Chr3g0101711 23.493 481 283 20 40 466 37 486 4.41e-16 80.9
Msa0012610 MtrunA17_Chr4g0058211 35.669 157 88 5 283 434 16 164 4.80e-16 77.0
Msa0012610 MtrunA17_Chr1g0203141 25.325 308 205 12 169 459 191 490 5.20e-16 80.5
Msa0012610 MtrunA17_Chr1g0162811 20.459 479 322 17 8 448 7 464 5.52e-16 80.5
Msa0012610 MtrunA17_Chr4g0011901 23.333 450 288 18 41 452 30 460 5.58e-16 80.5
Msa0012610 MtrunA17_Chr6g0451751 26.570 207 135 5 255 448 287 489 5.60e-16 80.5
Msa0012610 MtrunA17_Chr6g0457421 22.664 428 284 15 74 472 88 497 6.49e-16 80.1
Msa0012610 MtrunA17_Chr8g0351801 27.234 235 136 5 232 437 239 467 8.07e-16 80.1
Msa0012610 MtrunA17_Chr5g0431501 23.736 455 290 19 40 455 33 469 8.87e-16 79.7
Msa0012610 MtrunA17_Chr5g0431461 23.736 455 290 19 40 455 33 469 8.87e-16 79.7
Msa0012610 MtrunA17_Chr8g0362481 24.891 229 153 6 224 437 163 387 1.03e-15 79.3
Msa0012610 MtrunA17_Chr6g0466901 29.412 187 120 5 280 458 306 488 1.04e-15 79.7
Msa0012610 MtrunA17_Chr3g0101731 23.230 452 286 18 38 448 34 465 1.18e-15 79.3
Msa0012610 MtrunA17_Chr4g0046681 29.070 172 105 5 289 448 30 196 1.48e-15 76.3
Msa0012610 MtrunA17_Chr5g0419451 27.232 224 148 7 239 453 268 485 2.01e-15 78.6
Msa0012610 MtrunA17_Chr7g0235261 22.332 506 305 19 18 461 9 488 2.18e-15 78.6
Msa0012610 MtrunA17_Chr7g0246151 26.695 236 156 8 238 460 246 477 2.26e-15 78.6
Msa0012610 MtrunA17_Chr4g0011851 28.324 173 115 4 288 455 14 182 2.45e-15 75.1
Msa0012610 MtrunA17_Chr3g0101761 22.103 466 275 19 38 448 33 465 2.48e-15 78.2
Msa0012610 MtrunA17_Chr4g0063221 29.609 179 115 4 283 454 318 492 2.60e-15 78.6
Msa0012610 MtrunA17_Chr6g0484841 23.094 459 282 22 37 448 34 468 2.70e-15 78.2
Msa0012610 MtrunA17_Chr4g0039391 22.096 353 246 8 133 460 126 474 2.72e-15 78.2
Msa0012610 MtrunA17_Chr4g0061381 28.340 247 145 9 214 437 215 452 3.01e-15 78.2
Msa0012610 MtrunA17_Chr5g0409051 26.471 238 150 7 237 453 243 476 3.20e-15 78.2
Msa0012610 MtrunA17_Chr5g0446101 30.120 166 108 2 291 452 116 277 4.09e-15 76.3
Msa0012610 MtrunA17_Chr4g0026941 25.217 230 148 8 243 460 298 515 5.16e-15 77.4
Msa0012610 MtrunA17_Chr1g0174461 20.711 478 313 16 2 437 3 456 5.88e-15 77.4
Msa0012610 MtrunA17_Chr3g0128461 27.982 218 136 7 239 445 279 486 6.16e-15 77.0
Msa0012610 MtrunA17_Chr5g0406651 23.591 479 313 19 28 468 18 481 6.31e-15 77.0
Msa0012610 MtrunA17_Chr7g0258211 26.977 215 136 5 238 437 253 461 7.98e-15 76.6
Msa0012610 MtrunA17_Chr3g0082701 23.176 233 155 6 236 448 262 490 8.87e-15 76.6
Msa0012610 MtrunA17_Chr7g0258221 21.136 440 287 14 40 437 34 455 1.02e-14 76.6
Msa0012610 MtrunA17_Chr1g0174431 29.487 156 95 3 293 437 4 155 1.18e-14 73.2
Msa0012610 MtrunA17_Chr4g0020041 27.619 210 125 7 257 448 266 466 1.93e-14 75.5
Msa0012610 MtrunA17_Chr4g0004481 20.946 444 314 12 45 457 29 466 2.95e-14 75.1
Msa0012610 MtrunA17_Chr5g0430111 23.476 443 280 18 10 415 7 427 3.19e-14 74.7
Msa0012610 MtrunA17_Chr4g0008101 24.632 272 172 9 238 480 265 532 3.26e-14 75.1
Msa0012610 MtrunA17_Chr3g0101741 26.147 218 145 6 242 448 175 387 4.02e-14 74.3
Msa0012610 MtrunA17_Chr4g0011881 22.490 498 323 21 28 482 18 495 4.13e-14 74.7
Msa0012610 MtrunA17_Chr4g0011921 24.138 522 323 26 9 483 1 496 4.85e-14 74.3
Msa0012610 MtrunA17_Chr2g0280121 27.103 214 146 5 248 452 264 476 5.28e-14 74.3
Msa0012610 MtrunA17_Chr1g0200961 22.126 461 278 17 41 448 29 461 5.57e-14 73.9
Msa0012610 MtrunA17_Chr0c19g0493771 24.413 213 148 4 249 455 414 619 5.80e-14 74.3
Msa0012610 MtrunA17_Chr4g0074581 20.390 461 301 16 40 453 69 510 6.42e-14 73.9
Msa0012610 MtrunA17_Chr4g0047691 21.801 422 289 16 40 433 52 460 8.80e-14 73.6
Msa0012610 MtrunA17_Chr1g0151221 22.896 511 297 23 11 452 13 495 8.87e-14 73.6
Msa0012610 MtrunA17_Chr1g0167321 21.522 460 301 16 30 448 24 464 1.05e-13 73.2
Msa0012610 MtrunA17_Chr4g0011941 29.167 168 108 6 291 452 2 164 1.15e-13 69.7
Msa0012610 MtrunA17_Chr4g0047641 21.778 450 292 17 40 448 50 480 1.16e-13 73.2
Msa0012610 MtrunA17_Chr4g0038271 26.389 216 138 5 259 457 323 534 1.23e-13 73.2
Msa0012610 MtrunA17_Chr6g0449381 26.549 226 158 4 248 465 262 487 1.30e-13 73.2
Msa0012610 MtrunA17_Chr2g0313771 26.519 181 123 3 280 455 320 495 1.79e-13 72.8
Msa0012610 MtrunA17_Chr3g0094171 24.775 222 147 7 238 445 251 466 3.42e-13 71.6
Msa0012610 MtrunA17_Chr7g0227281 21.786 459 307 14 47 468 33 476 3.78e-13 71.6
Msa0012610 MtrunA17_Chr3g0086651 32.143 224 130 8 232 437 236 455 5.42e-13 71.2
Msa0012610 MtrunA17_Chr8g0348751 22.343 461 299 16 47 457 33 484 5.48e-13 71.2
Msa0012610 MtrunA17_Chr2g0296651 25.352 213 150 4 247 458 259 463 5.82e-13 70.9
Msa0012610 MtrunA17_Chr1g0164321 25.455 220 148 5 254 457 302 521 8.13e-13 70.5
Msa0012610 MtrunA17_Chr3g0086661 30.986 213 130 6 238 437 247 455 9.05e-13 70.5
Msa0012610 MtrunA17_Chr5g0396521 25.571 219 125 5 270 455 328 541 9.83e-13 70.5
Msa0012610 MtrunA17_Chr5g0436981 31.429 105 69 2 38 141 26 128 9.86e-13 67.0
Msa0012610 MtrunA17_Chr1g0154731 26.286 175 124 2 281 454 304 474 1.13e-12 70.1
Msa0012610 MtrunA17_Chr7g0260831 22.464 414 253 15 87 454 80 471 1.17e-12 70.1
Msa0012610 MtrunA17_Chr5g0432751 20.734 463 311 14 32 454 25 471 1.18e-12 70.1
Msa0012610 MtrunA17_Chr7g0260821 21.604 449 294 16 46 454 42 472 1.25e-12 70.1
Msa0012610 MtrunA17_Chr1g0174471 24.229 227 150 7 261 471 292 512 1.39e-12 69.7
Msa0012610 MtrunA17_Chr1g0193811 21.901 484 323 17 9 452 17 485 1.42e-12 69.7
Msa0012610 MtrunA17_Chr7g0246121 25.322 233 157 7 229 453 242 465 1.72e-12 69.3
Msa0012610 MtrunA17_Chr1g0184461 26.471 170 107 5 283 441 298 460 1.87e-12 69.3
Msa0012610 MtrunA17_Chr8g0339311 21.711 456 283 20 35 437 39 473 2.06e-12 69.3
Msa0012610 MtrunA17_Chr4g0011981 26.582 237 158 8 258 482 263 495 2.20e-12 68.9
Msa0012610 MtrunA17_Chr2g0280081 24.893 233 161 6 234 452 238 470 2.51e-12 69.7
Msa0012610 MtrunA17_Chr4g0056951 23.744 219 150 6 239 445 255 468 4.87e-12 68.2
Msa0012610 MtrunA17_Chr1g0184421 27.059 170 106 6 283 441 298 460 6.26e-12 67.8
Msa0012610 MtrunA17_Chr2g0313791 22.518 413 275 18 67 448 82 480 6.37e-12 67.8
Msa0012610 MtrunA17_Chr8g0387001 25.000 232 161 5 242 461 253 483 8.14e-12 67.4
Msa0012610 MtrunA17_Chr6g0449351 25.641 234 162 7 243 465 213 445 9.15e-12 67.0
Msa0012610 MtrunA17_Chr6g0472311 22.863 503 316 20 17 476 21 494 1.01e-11 67.0
Msa0012610 MtrunA17_Chr2g0314781 29.762 168 105 5 309 467 4 167 1.08e-11 63.5
Msa0012610 MtrunA17_Chr2g0280061 25.281 178 125 3 283 452 1 178 1.31e-11 63.9
Msa0012610 MtrunA17_Chr2g0310351 27.222 180 108 7 286 454 1 168 1.91e-11 63.5
Msa0012610 MtrunA17_Chr6g0463561 33.962 106 62 4 42 143 40 141 1.99e-11 63.2
Msa0012610 MtrunA17_Chr6g0463621 27.381 168 106 4 293 448 4 167 2.23e-11 63.2
Msa0012610 MtrunA17_Chr1g0204271 23.750 320 187 13 167 444 162 466 2.49e-11 65.9
Msa0012610 MtrunA17_Chr3g0101591 27.083 192 119 7 273 448 16 202 2.80e-11 63.5
Msa0012610 MtrunA17_Chr8g0380501 22.052 458 307 17 47 466 29 474 3.38e-11 65.5
Msa0012610 MtrunA17_Chr8g0387101 25.946 185 128 4 277 452 288 472 3.47e-11 65.5
Msa0012610 MtrunA17_Chr6g0472221 25.431 232 150 9 238 455 276 498 3.75e-11 65.5
Msa0012610 MtrunA17_Chr7g0248991 25.984 127 89 1 285 411 230 351 4.30e-11 64.7
Msa0012610 MtrunA17_Chr2g0321171 25.182 274 164 9 220 460 208 473 5.49e-11 64.7
Msa0012610 MtrunA17_Chr6g0449341 26.877 253 153 9 243 466 302 551 5.55e-11 64.7
Msa0012610 MtrunA17_Chr2g0288661 26.111 180 123 4 281 455 316 490 8.11e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012610 AT2G32440.2 46.377 483 254 3 3 482 7 487 1.28e-165 477
Msa0012610 AT2G32440.1 46.377 483 254 3 3 482 7 487 1.28e-165 477
Msa0012610 AT1G05160.2 45.530 481 257 3 3 479 8 487 2.67e-162 468
Msa0012610 AT1G05160.1 45.530 481 257 3 3 479 8 487 2.67e-162 468
Msa0012610 AT3G19270.2 31.078 473 309 8 6 477 5 461 2.07e-71 234
Msa0012610 AT3G19270.1 31.403 449 291 8 6 453 5 437 4.63e-70 230
Msa0012610 AT4G19230.2 32.880 441 263 11 39 463 35 458 2.99e-68 226
Msa0012610 AT4G19230.1 32.723 437 276 9 39 474 35 454 6.93e-68 225
Msa0012610 AT5G45340.1 30.901 466 298 11 10 474 12 454 2.24e-66 221
Msa0012610 AT5G45340.2 31.195 452 287 11 10 460 12 440 4.84e-66 219
Msa0012610 AT4G36380.1 30.549 419 282 6 40 452 69 484 7.87e-65 218
Msa0012610 AT3G13730.2 30.282 426 280 7 37 453 47 464 6.03e-64 214
Msa0012610 AT1G73340.1 28.859 447 293 12 34 470 37 468 7.42e-64 215
Msa0012610 AT3G13730.1 30.282 426 280 7 37 453 47 464 8.14e-64 215
Msa0012610 AT2G29090.2 29.630 459 308 9 26 482 37 482 6.04e-63 213
Msa0012610 AT2G29090.1 29.630 459 308 9 26 482 37 482 6.04e-63 213
Msa0012610 AT1G12740.1 29.519 437 300 6 24 457 15 446 1.27e-62 211
Msa0012610 AT1G12740.2 29.345 443 299 7 24 457 15 452 9.85e-61 206
Msa0012610 AT5G05690.1 30.952 420 272 9 40 452 31 439 2.11e-60 205
Msa0012610 AT1G12740.4 29.120 443 300 7 24 457 15 452 2.83e-60 205
Msa0012610 AT5G36110.1 29.698 431 297 5 33 460 26 453 3.48e-60 205
Msa0012610 AT3G50660.1 29.661 472 282 10 34 464 33 495 1.37e-59 204
Msa0012610 AT5G38970.1 28.176 433 293 10 32 460 26 444 2.01e-58 200
Msa0012610 AT1G55940.2 26.338 467 331 10 1 458 7 469 6.24e-58 199
Msa0012610 AT3G30180.1 27.922 462 313 10 1 460 1 444 1.46e-57 197
Msa0012610 AT1G55940.1 26.464 461 326 10 1 452 7 463 1.90e-57 197
Msa0012610 AT1G19630.1 29.062 437 293 11 34 463 29 455 7.81e-56 193
Msa0012610 AT1G19630.3 28.770 431 290 11 34 457 29 449 8.39e-55 190
Msa0012610 AT1G78490.1 25.966 466 332 9 7 467 4 461 5.95e-52 183
Msa0012610 AT5G14400.2 26.761 426 279 8 45 464 1 399 6.53e-52 181
Msa0012610 AT5G14400.3 26.923 416 271 8 45 454 1 389 1.81e-51 179
Msa0012610 AT2G29090.3 29.082 392 271 6 93 482 1 387 6.98e-50 175
Msa0012610 AT5G05690.2 30.585 376 246 8 40 411 31 395 2.37e-49 174
Msa0012610 AT3G50660.2 30.000 420 253 10 34 424 33 440 4.06e-48 172
Msa0012610 AT5G38970.3 27.415 383 261 9 32 411 26 394 7.91e-47 168
Msa0012610 AT3G44970.1 25.478 471 328 11 8 468 5 462 3.33e-46 167
Msa0012610 AT2G42850.1 27.629 485 330 12 6 483 11 481 9.09e-46 166
Msa0012610 AT5G38970.2 26.558 369 260 8 96 460 2 363 8.34e-44 159
Msa0012610 AT5G38970.4 26.558 369 260 8 96 460 2 363 8.34e-44 159
Msa0012610 AT4G15300.3 26.077 441 306 10 20 453 5 432 2.85e-43 159
Msa0012610 AT4G15300.2 26.077 441 306 10 20 453 15 442 4.33e-43 159
Msa0012610 AT1G19630.2 27.368 380 260 10 40 412 35 405 1.09e-42 157
Msa0012610 AT1G78490.2 25.428 409 295 7 7 412 4 405 7.55e-42 154
Msa0012610 AT1G65670.1 25.866 433 298 9 23 448 18 434 7.74e-42 155
Msa0012610 AT5G05690.3 30.556 324 210 7 135 452 6 320 1.04e-41 152
Msa0012610 AT1G12740.3 28.571 357 249 5 24 379 15 366 2.15e-40 149
Msa0012610 AT5G36110.2 28.852 357 248 5 33 386 26 379 4.80e-40 149
Msa0012610 AT5G48000.2 24.598 435 314 10 25 452 20 447 5.59e-40 150
Msa0012610 AT5G48000.4 24.598 435 314 10 25 452 20 447 5.59e-40 150
Msa0012610 AT5G48000.7 24.598 435 314 10 25 452 20 447 5.59e-40 150
Msa0012610 AT5G48000.6 24.598 435 314 10 25 452 20 447 5.59e-40 150
Msa0012610 AT5G48000.5 24.598 435 314 10 25 452 20 447 5.59e-40 150
Msa0012610 AT5G48000.3 24.598 435 314 10 25 452 20 447 5.59e-40 150
Msa0012610 AT5G48000.1 24.138 435 316 9 25 452 61 488 6.74e-40 151
Msa0012610 AT4G15300.1 24.729 461 309 11 20 453 5 454 1.32e-37 144
Msa0012610 AT4G36380.2 26.979 341 243 5 40 377 69 406 5.63e-37 141
Msa0012610 AT5G14400.1 25.543 368 243 7 103 464 3 345 7.25e-37 139
Msa0012610 AT4G15310.1 23.666 431 316 10 23 448 19 441 1.04e-34 135
Msa0012610 AT5G36140.1 27.211 294 210 4 27 319 19 309 2.48e-33 129
Msa0012610 AT4G15393.2 23.409 440 312 13 23 453 18 441 1.27e-30 124
Msa0012610 AT2G28860.1 24.116 481 304 21 28 475 29 481 3.02e-30 123
Msa0012610 AT3G30290.1 23.514 370 274 7 82 448 5 368 3.81e-30 122
Msa0012610 AT4G15396.3 21.981 414 309 9 40 448 35 439 1.79e-29 120
Msa0012610 AT4G15396.1 21.882 425 318 9 29 448 24 439 1.98e-29 120
Msa0012610 AT2G42850.2 26.289 388 269 10 6 386 11 388 5.01e-29 118
Msa0012610 AT2G28850.1 23.701 481 306 21 28 475 29 481 8.32e-29 119
Msa0012610 AT5G14400.4 24.189 339 242 7 45 377 1 330 1.82e-27 112
Msa0012610 AT2G34490.1 24.396 455 303 18 48 475 45 485 1.00e-25 110
Msa0012610 AT2G34500.1 22.717 449 313 15 48 475 45 480 1.80e-25 109
Msa0012610 AT5G04630.1 24.040 495 321 18 5 463 10 485 1.42e-24 107
Msa0012610 AT2G29090.4 26.871 294 201 8 26 317 37 318 2.33e-24 104
Msa0012610 AT5G57220.1 23.060 464 300 16 38 468 28 467 3.49e-23 102
Msa0012610 AT2G45550.1 24.217 479 302 17 15 452 13 471 4.97e-23 102
Msa0012610 AT5G36130.1 34.286 140 91 1 345 483 1 140 1.05e-22 94.4
Msa0012610 AT4G15396.2 20.706 425 302 9 29 448 24 418 1.99e-22 100
Msa0012610 AT2G45560.1 22.689 476 319 15 12 452 10 471 3.04e-22 100
Msa0012610 AT4G15393.1 22.785 395 284 11 23 411 18 397 8.41e-22 97.8
Msa0012610 AT1G66540.2 26.697 221 155 4 239 458 75 289 1.26e-21 96.3
Msa0012610 AT1G66540.1 26.457 223 157 4 239 460 134 350 2.97e-21 95.9
Msa0012610 AT3G26180.1 23.125 480 311 16 15 454 8 469 4.94e-21 96.3
Msa0012610 AT4G15396.4 20.519 385 295 7 29 411 24 399 5.81e-21 95.1
Msa0012610 AT3G48300.1 24.561 456 296 16 36 464 28 462 6.02e-21 95.9
Msa0012610 AT3G48300.2 24.561 456 296 16 36 464 30 464 6.08e-21 95.9
Msa0012610 AT3G26170.1 22.840 486 315 17 11 454 2 469 6.61e-21 95.9
Msa0012610 AT3G28740.1 26.818 220 153 4 239 457 256 468 1.59e-20 94.7
Msa0012610 AT5G25120.1 22.774 483 308 16 6 452 4 457 1.72e-20 94.7
Msa0012610 AT3G26270.1 21.581 468 307 15 29 454 21 470 2.53e-20 94.4
Msa0012610 AT4G12300.1 21.826 449 296 15 40 448 42 475 3.73e-20 93.6
Msa0012610 AT3G26330.1 24.115 452 285 18 37 448 28 461 4.07e-20 93.6
Msa0012610 AT4G13770.1 25.370 473 292 21 27 458 17 469 5.84e-20 93.2
Msa0012610 AT4G37340.1 26.457 223 157 4 239 460 247 463 7.27e-20 92.8
Msa0012610 AT4G36220.1 22.757 457 272 16 47 449 47 476 7.38e-20 92.8
Msa0012610 AT3G26280.1 22.609 460 301 15 29 449 21 464 8.78e-20 92.4
Msa0012610 AT3G26280.2 22.609 460 301 15 29 449 38 481 1.33e-19 92.0
Msa0012610 AT4G12320.1 21.368 468 301 18 27 448 31 477 1.42e-19 92.0
Msa0012610 AT3G20940.1 22.146 438 299 12 40 445 42 469 1.55e-19 92.0
Msa0012610 AT4G37410.1 23.245 413 267 14 81 458 65 462 1.66e-19 91.7
Msa0012610 AT4G37400.1 21.212 429 288 13 69 461 51 465 1.74e-19 91.7
Msa0012610 AT4G37430.1 23.395 483 314 20 12 457 1 464 2.63e-19 90.9
Msa0012610 AT4G31970.1 28.326 233 150 5 249 469 272 499 3.07e-19 90.9
Msa0012610 AT4G37370.1 25.296 253 173 7 239 482 247 492 3.31e-19 90.9
Msa0012610 AT3G48270.1 25.055 455 265 19 39 452 33 452 9.81e-19 89.4
Msa0012610 AT2G45570.1 23.325 403 265 15 87 452 77 472 9.88e-19 89.4
Msa0012610 AT3G26180.2 27.778 234 153 6 234 454 105 335 1.14e-18 88.2
Msa0012610 AT2G40890.1 23.094 459 293 18 33 449 20 460 1.29e-18 89.0
Msa0012610 AT4G37310.1 23.951 405 264 15 103 471 96 492 1.59e-18 88.6
Msa0012610 AT5G35715.1 28.910 211 138 4 236 437 178 385 2.46e-18 87.8
Msa0012610 AT4G31940.1 27.039 233 153 5 249 469 273 500 3.02e-18 87.8
Msa0012610 AT5G04330.1 22.958 453 289 13 39 449 31 465 3.54e-18 87.8
Msa0012610 AT4G31950.1 28.326 233 150 6 249 469 261 488 5.07e-18 87.0
Msa0012610 AT3G61040.1 27.236 246 167 6 223 462 231 470 5.78e-18 87.0
Msa0012610 AT4G37360.1 25.446 224 154 5 263 478 270 488 6.35e-18 86.7
Msa0012610 AT5G36220.1 22.319 457 295 20 40 458 33 467 9.87e-18 86.3
Msa0012610 AT4G37320.1 24.603 252 171 7 239 480 248 490 1.06e-17 86.3
Msa0012610 AT3G53300.1 23.380 432 285 12 40 437 28 447 1.33e-17 85.9
Msa0012610 AT1G16410.1 23.467 473 289 19 40 456 45 500 1.40e-17 85.9
Msa0012610 AT3G26290.1 24.890 454 284 20 32 448 28 461 1.55e-17 85.5
Msa0012610 AT3G26290.2 24.890 454 284 20 32 448 41 474 1.66e-17 85.5
Msa0012610 AT2G26710.1 23.191 470 297 18 22 448 36 484 1.70e-17 85.5
Msa0012610 AT1G11610.2 23.462 439 293 15 40 449 33 457 1.95e-17 85.5
Msa0012610 AT1G11610.1 23.462 439 293 15 40 449 33 457 2.02e-17 85.1
Msa0012610 AT5G06900.1 21.696 507 337 19 1 471 2 484 2.71e-17 84.7
Msa0012610 AT5G67310.1 22.247 454 295 15 40 458 42 472 3.65e-17 84.3
Msa0012610 AT2G23190.1 26.068 234 162 6 230 460 282 507 4.10e-17 84.3
Msa0012610 AT2G23220.1 24.664 223 160 4 239 460 263 478 5.25e-17 84.0
Msa0012610 AT2G45580.2 24.691 243 167 4 232 462 90 328 8.16e-17 82.4
Msa0012610 AT3G20950.1 23.370 368 239 10 126 458 130 489 8.24e-17 83.6
Msa0012610 AT3G26150.1 22.777 461 310 15 11 437 2 450 1.07e-16 83.2
Msa0012610 AT1G13080.1 21.308 474 321 17 12 449 5 462 1.17e-16 82.8
Msa0012610 AT5G36220.2 24.324 222 160 4 238 458 107 321 1.37e-16 81.6
Msa0012610 AT1G13080.2 23.810 315 210 10 161 449 34 344 1.46e-16 81.6
Msa0012610 AT1G33730.1 26.549 226 151 5 239 453 115 336 1.65e-16 81.6
Msa0012610 AT1G33730.2 26.549 226 151 5 239 453 115 336 1.65e-16 81.6
Msa0012610 AT1G11680.1 26.695 236 154 6 236 459 233 461 2.09e-16 82.0
Msa0012610 AT2G45580.1 24.691 243 167 4 232 462 244 482 2.17e-16 82.0
Msa0012610 AT3G26300.1 22.247 454 307 14 29 448 20 461 2.25e-16 82.0
Msa0012610 AT4G37330.1 26.147 218 153 4 244 460 250 460 2.55e-16 81.6
Msa0012610 AT3G26160.1 23.465 456 305 15 11 433 2 446 2.71e-16 81.6
Msa0012610 AT2G30770.1 24.533 428 278 17 40 437 33 445 4.28e-16 81.3
Msa0012610 AT5G25140.1 23.362 458 289 17 34 452 23 457 5.93e-16 80.9
Msa0012610 AT5G47990.1 25.670 261 171 9 216 458 230 485 6.25e-16 80.9
Msa0012610 AT2G30750.1 24.138 435 285 16 40 443 33 453 6.74e-16 80.5
Msa0012610 AT3G48320.1 23.878 490 298 23 1 452 1 453 9.34e-16 80.1
Msa0012610 AT3G26830.1 21.983 464 289 15 33 449 21 458 1.04e-15 80.1
Msa0012610 AT2G25160.1 22.458 472 303 18 32 456 28 483 2.41e-15 79.0
Msa0012610 AT5G25130.1 22.517 453 301 14 33 452 22 457 2.63e-15 78.6
Msa0012610 AT5G44620.1 26.222 225 148 7 238 448 258 478 2.87e-15 78.6
Msa0012610 AT1G13100.1 24.699 332 215 9 133 433 115 442 4.10e-15 78.2
Msa0012610 AT3G26210.1 23.055 347 231 10 133 449 121 461 4.27e-15 78.2
Msa0012610 AT3G20935.1 27.957 186 117 3 286 458 130 311 6.91e-15 76.3
Msa0012610 AT5G23190.1 21.460 452 314 12 47 458 65 515 6.96e-15 77.4
Msa0012610 AT4G32170.1 26.267 217 145 7 250 455 263 475 9.55e-15 77.0
Msa0012610 AT2G21910.1 28.571 189 123 6 278 457 295 480 9.82e-15 77.0
Msa0012610 AT3G25180.1 25.974 231 150 8 253 469 266 489 1.08e-14 77.0
Msa0012610 AT3G26230.1 27.586 203 132 7 259 448 263 463 1.30e-14 76.6
Msa0012610 AT3G10570.1 23.846 260 176 8 221 463 235 489 1.33e-14 76.6
Msa0012610 AT5G06905.1 22.153 483 305 19 10 443 6 466 1.48e-14 76.3
Msa0012610 AT1G50520.1 25.217 230 137 4 239 437 238 463 1.93e-14 76.3
Msa0012610 AT2G27690.1 25.106 235 163 6 242 469 249 477 1.96e-14 75.9
Msa0012610 AT5G08250.1 21.124 445 313 12 47 454 4 447 3.36e-14 75.1
Msa0012610 AT5G08250.2 21.351 459 320 13 36 454 52 509 3.80e-14 75.1
Msa0012610 AT3G26220.1 29.358 218 139 7 255 460 262 476 4.01e-14 75.1
Msa0012610 AT3G32047.1 25.630 238 155 7 255 475 270 502 4.55e-14 74.7
Msa0012610 AT2G23180.1 24.201 219 152 5 253 457 268 486 5.14e-14 74.7
Msa0012610 AT4G13290.1 24.439 446 288 20 40 455 33 459 6.12e-14 74.3
Msa0012610 AT4G15330.1 20.236 509 337 16 12 472 17 504 6.66e-14 74.3
Msa0012610 AT2G24180.1 24.107 224 153 6 238 448 248 467 1.27e-13 73.6
Msa0012610 AT3G61880.1 26.721 247 162 7 239 475 279 516 1.39e-13 73.6
Msa0012610 AT2G26170.1 22.609 460 289 16 42 452 47 488 1.52e-13 73.2
Msa0012610 AT4G15330.2 24.664 223 142 4 272 472 258 476 2.00e-13 72.8
Msa0012610 AT1G50560.1 24.786 234 160 5 238 460 258 486 2.27e-13 72.8
Msa0012610 AT3G61880.2 27.232 224 142 7 239 448 279 495 2.90e-13 72.4
Msa0012610 AT5G05260.2 21.336 464 299 16 40 452 40 488 3.24e-13 72.4
Msa0012610 AT5G24900.1 25.472 212 136 8 248 445 286 489 3.48e-13 72.0
Msa0012610 AT5G24900.2 25.472 212 136 8 248 445 169 372 3.66e-13 71.6
Msa0012610 AT1G16410.2 23.256 387 235 16 40 381 45 414 3.80e-13 71.6
Msa0012610 AT3G14620.1 26.667 225 155 5 237 455 267 487 4.25e-13 72.0
Msa0012610 AT3G44970.2 20.513 351 263 9 8 352 5 345 4.39e-13 71.2
Msa0012610 AT5G24910.1 26.244 221 140 6 240 445 282 494 4.88e-13 71.6
Msa0012610 AT3G20110.1 24.670 227 159 4 242 460 255 477 5.10e-13 71.6
Msa0012610 AT1G28430.1 22.381 420 263 16 86 458 80 483 7.56e-13 71.2
Msa0012610 AT5G52400.1 24.038 208 144 5 253 454 291 490 9.15e-13 70.9
Msa0012610 AT1G47620.1 26.761 213 144 5 256 458 280 490 1.02e-12 70.9
Msa0012610 AT5G02900.1 25.743 202 137 6 278 469 266 464 1.25e-12 70.1
Msa0012610 AT4G31500.1 23.210 461 275 20 40 448 29 462 1.29e-12 70.5
Msa0012610 AT1G31800.1 25.000 184 126 4 285 462 369 546 1.53e-12 70.5
Msa0012610 AT1G75130.1 23.659 410 269 14 76 460 89 479 2.07e-12 69.7
Msa0012610 AT2G46660.1 21.396 444 292 15 42 448 72 495 2.08e-12 69.7
Msa0012610 AT4G12310.1 24.476 286 174 11 197 448 202 479 2.27e-12 69.7
Msa0012610 AT4G22690.1 23.285 481 299 20 9 448 64 515 2.53e-12 69.7
Msa0012610 AT1G24540.1 21.861 462 307 16 43 458 42 495 3.42e-12 68.9
Msa0012610 AT3G20140.1 19.492 472 321 14 27 458 29 481 3.72e-12 68.9
Msa0012610 AT1G64940.1 25.751 233 155 6 240 458 253 481 7.09e-12 68.2
Msa0012610 AT3G20080.2 19.231 468 332 14 27 458 29 486 7.57e-12 67.8
Msa0012610 AT3G20080.1 19.231 468 332 14 27 458 29 486 7.57e-12 67.8
Msa0012610 AT2G42250.1 24.103 195 130 4 257 437 272 462 7.72e-12 67.8
Msa0012610 AT2G14100.1 23.504 234 160 5 239 458 256 484 8.34e-12 67.8
Msa0012610 AT3G48520.1 25.463 216 137 6 260 463 276 479 9.06e-12 67.8
Msa0012610 AT3G53280.1 21.028 428 290 14 40 433 28 441 1.29e-11 67.0
Msa0012610 AT5G24960.1 23.778 450 293 20 40 455 33 466 1.59e-11 67.0
Msa0012610 AT2G26170.2 25.714 210 145 4 251 452 199 405 2.39e-11 66.2
Msa0012610 AT4G15110.1 22.500 240 144 6 256 461 325 556 3.84e-11 65.9
Msa0012610 AT5G38450.1 28.191 188 127 4 283 466 318 501 7.39e-11 64.7

Find 114 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACACATCATTACTAAAAT+AGG 0.127293 1_1:+18962632 Msa0012610:CDS
ATCACTTCCATAGTGGATTT+TGG 0.133399 1_1:-18962374 None:intergenic
TACGATAGGTTGAAATAATT+TGG 0.136617 1_1:-18962874 None:intergenic
AATATCGATGATTACTTTAA+AGG 0.142531 1_1:-18962591 None:intergenic
ACATTACCAGGAGTCCTTTA+TGG 0.179185 1_1:-18962721 None:intergenic
GTTGGGACCTTCCTTTCTTT+TGG 0.202592 1_1:+18965879 Msa0012610:CDS
GGGTTAAATTCACCCGAATT+TGG 0.217051 1_1:-18964820 None:intergenic
TGATGAGATGTAAATTCTTT+TGG 0.243236 1_1:+18962393 Msa0012610:CDS
AGACATTGTGATCAATTCTT+TGG 0.249443 1_1:+18962511 Msa0012610:CDS
AGATTTGGTTGATAATATTC+TGG 0.256189 1_1:+18962935 Msa0012610:CDS
GTAATCATCGATATTCTTAT+AGG 0.263526 1_1:+18962599 Msa0012610:CDS
CCCACTGCCTCCTGGTCATA+TGG 0.265045 1_1:+18961671 Msa0012610:CDS
TCTATGCCCATTAACCTTCC+TGG 0.289148 1_1:+18962689 Msa0012610:CDS
CTTAGCAAGGCAATTGTCTC+TGG 0.291577 1_1:-18966788 None:intergenic
CATATGGGATGGCCACTTAT+TGG 0.306076 1_1:+18961687 Msa0012610:CDS
TTGCCTTGCTAAGGTGATAA+AGG 0.308770 1_1:+18966798 Msa0012610:CDS
ATCTACAAGTCACACTTGTT+TGG 0.309127 1_1:+18962272 Msa0012610:CDS
CAAAGATGGAAATACAATAC+TGG 0.309840 1_1:+18961553 Msa0012610:exon
TCCTACATATTATCCAAATT+CGG 0.330916 1_1:+18964807 Msa0012610:CDS
TCATCAACAACCTTGTTTCC+AGG 0.333764 1_1:+18961760 Msa0012610:CDS
AGCAAAACCAGGAAGGTTAA+TGG 0.340683 1_1:-18962696 None:intergenic
TGGAAATACAATACTGGGTT+TGG 0.348201 1_1:+18961559 Msa0012610:CDS
GGTGATGGTAAGCTAGTAAT+AGG 0.349881 1_1:-18966760 None:intergenic
AAAAGAGATGTTACCATCAA+TGG 0.359714 1_1:+18964628 Msa0012610:CDS
TTTGTTAAAGATTTCTCATC+AGG 0.361995 1_1:+18961723 Msa0012610:CDS
CACAAGGCGTAACATTTCAT+TGG 0.369454 1_1:-18964575 None:intergenic
AGGCAATTGTCTCTGGGCTT+TGG 0.371507 1_1:-18966781 None:intergenic
AACACATCATTACTAAAATA+GGG 0.393685 1_1:+18962633 Msa0012610:CDS
CAACTTACATCCCATCTTGA+TGG 0.394210 1_1:-18964841 None:intergenic
GGTAACACTTTCCATCCTTT+CGG 0.403942 1_1:-18964760 None:intergenic
GAATAGCCACAAACCATTGA+TGG 0.407577 1_1:-18964641 None:intergenic
TCTACAAGTCACACTTGTTT+GGG 0.413311 1_1:+18962273 Msa0012610:CDS
GCAAAACCAGGAAGGTTAAT+GGG 0.415270 1_1:-18962695 None:intergenic
TGCTTTCCATAAAGGACTCC+TGG 0.418652 1_1:+18962715 Msa0012610:CDS
CCTACATATTATCCAAATTC+GGG 0.419464 1_1:+18964808 Msa0012610:CDS
CAATGTCTTCCATACGAGTT+AGG 0.419997 1_1:-18962496 None:intergenic
TCTTGATGAGATTAAACAAA+TGG 0.424706 1_1:+18964068 Msa0012610:CDS
GACATCATTGACATGTTGAT+AGG 0.431817 1_1:+18962996 Msa0012610:CDS
CGGTTATCCAAAATCCACTA+TGG 0.432167 1_1:+18962367 Msa0012610:CDS
TATATTCAATTATTCAAAGA+TGG 0.436798 1_1:+18961539 Msa0012610:exon
GATATCTATTATATCTTATG+AGG 0.439312 1_1:-18967014 None:intergenic
CGTTCAAAATACATAAGACT+TGG 0.439870 1_1:+18966939 Msa0012610:three_prime_UTR
CATTGTGATCAATTCTTTGG+AGG 0.452272 1_1:+18962514 Msa0012610:CDS
AAGCTAGTAATAGGACAATC+TGG 0.458698 1_1:-18966751 None:intergenic
AGAAAGGAAGGTCCCAACTT+TGG 0.462167 1_1:-18965874 None:intergenic
CCACTGCCTCCTGGTCATAT+GGG 0.464200 1_1:+18961672 Msa0012610:CDS
ACATCTCATCACTTCCATAG+TGG 0.468733 1_1:-18962381 None:intergenic
TTGTCTCTGGGCTTTGGTGA+TGG 0.469088 1_1:-18966775 None:intergenic
AAATTTGTTGCAGAAGGAGC+AGG 0.476870 1_1:+18964002 Msa0012610:intron
CCCATATGACCAGGAGGCAG+TGG 0.477667 1_1:-18961672 None:intergenic
CCACATCATACCGGTTGCTA+TGG 0.480484 1_1:-18963042 None:intergenic
CAGGATCACAATGCCAAAGT+TGG 0.481651 1_1:+18965861 Msa0012610:intron
TTCAACCTATCGTAGAAGAA+AGG 0.481735 1_1:+18962883 Msa0012610:CDS
TAGTTGTTTGTTTCATCACT+TGG 0.486612 1_1:+18966832 Msa0012610:exon
TAATATTCTGGAATTGAAAG+AGG 0.493852 1_1:+18962947 Msa0012610:CDS
CCCGAATTTGGATAATATGT+AGG 0.495061 1_1:-18964808 None:intergenic
ATAATAGGCACGTGAGAAGC+TGG 0.498297 1_1:+18962851 Msa0012610:intron
AAGGAAATGATGTAGAAATA+CGG 0.500913 1_1:-18965952 None:intergenic
AGCACTATAAATTTCAGTAA+AGG 0.502128 1_1:-18962660 None:intergenic
GCAGGAAGTATGTATTGCCC+TGG 0.502788 1_1:+18965903 Msa0012610:CDS
GCATCACAAATGATGATGCT+TGG 0.509852 1_1:-18962299 None:intergenic
GGTCATGAAGCCATAGCAAC+CGG 0.511335 1_1:+18963032 Msa0012610:CDS
TACTTCCTGCTCCAAAAGAA+AGG 0.512941 1_1:-18965890 None:intergenic
TGCCTCCTGGTCATATGGGA+TGG 0.514622 1_1:+18961676 Msa0012610:CDS
GTTATATAATACCGAAAGGA+TGG 0.516884 1_1:+18964749 Msa0012610:CDS
GAACTCACTTGTAATTAAGA+AGG 0.520375 1_1:-18965971 None:intergenic
CTGGAATTGAAAGAGGAAAA+CGG 0.523201 1_1:+18962954 Msa0012610:CDS
AAAATATTTCTCTGCTTCCA+AGG 0.524423 1_1:+18961276 None:intergenic
GTCAACATATTGCCAATAAG+TGG 0.525688 1_1:-18961699 None:intergenic
GTGAATTTAACCCATCAAGA+TGG 0.526651 1_1:+18964830 Msa0012610:CDS
AGGTTGTTGATGAATGAATC+AGG 0.528148 1_1:-18961750 None:intergenic
TAACCCATTATATATAGCCT+TGG 0.528339 1_1:-18961293 None:intergenic
TGATGAGAAATCTTTAACAA+AGG 0.530390 1_1:-18961721 None:intergenic
TCAATGATGTCCTCATCCTC+AGG 0.531618 1_1:-18962984 None:intergenic
TTCTAAAGTATTGTGGCCCA+TGG 0.532989 1_1:-18962468 None:intergenic
GGTACATTTCTAAAGTATTG+TGG 0.534352 1_1:-18962475 None:intergenic
TGAATTTAACCCATCAAGAT+GGG 0.535394 1_1:+18964831 Msa0012610:CDS
AACTTACATCCCATCTTGAT+GGG 0.538803 1_1:-18964840 None:intergenic
AGGATCACAATGCCAAAGTT+GGG 0.540082 1_1:+18965862 Msa0012610:intron
ATACACTACCCACTGCCTCC+TGG 0.543472 1_1:+18961663 Msa0012610:CDS
TTAGCAAGGCAATTGTCTCT+GGG 0.548649 1_1:-18966787 None:intergenic
AACCTCCTTTCTTCTACGAT+AGG 0.549585 1_1:-18962888 None:intergenic
CGGTTGGAAACCTGAGGATG+AGG 0.556247 1_1:+18962974 Msa0012610:CDS
CAGAGACAATTGCCTTGCTA+AGG 0.559969 1_1:+18966789 Msa0012610:CDS
AGAAATGTACCTAACTCGTA+TGG 0.564432 1_1:+18962487 Msa0012610:CDS
GGAAATCATGAAGAGAAGAA+TGG 0.565068 1_1:+18964026 Msa0012610:CDS
TCCTGCTCCAAAAGAAAGGA+AGG 0.565172 1_1:-18965886 None:intergenic
ATGAAAGAGACCTGGAAACA+AGG 0.566057 1_1:-18961770 None:intergenic
AAAGATGGAAATACAATACT+GGG 0.567203 1_1:+18961554 Msa0012610:exon
TTAATCTCAGTTCTTACCAT+GGG 0.569659 1_1:+18962452 Msa0012610:CDS
AAGGATGGAAAGTGTTACCT+TGG 0.572454 1_1:+18964764 Msa0012610:CDS
TATAATTGACCACATCATAC+CGG 0.580154 1_1:-18963051 None:intergenic
AATTGAAAGAGGAAAACGGT+TGG 0.580813 1_1:+18962958 Msa0012610:CDS
TCAGGTTATATAATACCGAA+AGG 0.581229 1_1:+18964745 Msa0012610:intron
AAACCTTTATCACCTTAGCA+AGG 0.581753 1_1:-18966801 None:intergenic
CAGGAAGTATGTATTGCCCT+GGG 0.601534 1_1:+18965904 Msa0012610:CDS
CCTTTATGGAAAGCAAAACC+AGG 0.605116 1_1:-18962707 None:intergenic
CTTAATCTCAGTTCTTACCA+TGG 0.610386 1_1:+18962451 Msa0012610:CDS
TATGGAAAGCAAAACCAGGA+AGG 0.610935 1_1:-18962703 None:intergenic
AACCTATCGTAGAAGAAAGG+AGG 0.614560 1_1:+18962886 Msa0012610:CDS
AGTGGCCATCCCATATGACC+AGG 0.618868 1_1:-18961681 None:intergenic
TTATGAGGAGATTAACTGAG+TGG 0.626660 1_1:+18961616 Msa0012610:CDS
CCATAGCAACCGGTATGATG+TGG 0.631364 1_1:+18963042 Msa0012610:CDS
GTATTGCCCTGGGAGTGACT+TGG 0.632968 1_1:+18965914 Msa0012610:CDS
TTTGTTGCAGAAGGAGCAGG+AGG 0.634319 1_1:+18964005 Msa0012610:intron
CCATATGACCAGGAGGCAGT+GGG 0.638047 1_1:-18961671 None:intergenic
TTGCGAAGTTTATACTCACA+AGG 0.656668 1_1:-18964591 None:intergenic
ATGTGAATAGCTCTTAACCA+AGG 0.680773 1_1:-18964781 None:intergenic
GGCCATCCCATATGACCAGG+AGG 0.682350 1_1:-18961678 None:intergenic
TTTGTGATGCTGATATGTGT+AGG 0.683244 1_1:+18962312 Msa0012610:CDS
TTGGTTAAGAGCTATTCACA+TGG 0.683703 1_1:+18964783 Msa0012610:CDS
GGAAAACGGTTGGAAACCTG+AGG 0.686498 1_1:+18962968 Msa0012610:CDS
TTCTAGTATGAATCACCCAG+TGG 0.711871 1_1:+18962541 Msa0012610:CDS
TGTTGATGAATGAATCAGGA+TGG 0.721070 1_1:-18961746 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATATAAAAAAATAT+AGG - chr1_1:18965836-18965855 None:intergenic 0.0%
!!! TATTTTTTTATATTATTATA+TGG + chr1_1:18965837-18965856 Msa0012610:intron 0.0%
!!! CTTAATATTTTTTAAGATTT+GGG - chr1_1:18965123-18965142 None:intergenic 10.0%
!!! ACTTAATATTTTTTAAGATT+TGG - chr1_1:18965124-18965143 None:intergenic 10.0%
!!! TATAAAATTACTTTTAACTA+TGG + chr1_1:18965541-18965560 Msa0012610:intron 10.0%
!!! ATTTAATTTTGAAAGATATA+CGG + chr1_1:18965630-18965649 Msa0012610:intron 10.0%
!! TATTCAATGTTATTATATAA+AGG - chr1_1:18965726-18965745 None:intergenic 10.0%
!!! ATATTTATTTTTCTTTTGAA+AGG + chr1_1:18966627-18966646 Msa0012610:intron 10.0%
!! TTCATTTGCTTATTATATAT+TGG - chr1_1:18961510-18961529 None:intergenic 15.0%
!! TATATTCAATTATTCAAAGA+TGG + chr1_1:18961539-18961558 Msa0012610:exon 15.0%
!! AAATAAGAAATAATACTGTT+CGG + chr1_1:18962143-18962162 Msa0012610:intron 15.0%
!! AAATAGTAACAAAAAAGATT+TGG + chr1_1:18962920-18962939 Msa0012610:CDS 15.0%
!! AAATTAAGTTTACATTATGT+AGG + chr1_1:18963115-18963134 Msa0012610:intron 15.0%
!!! AGTGTTAATATAATTCATTT+TGG - chr1_1:18963219-18963238 None:intergenic 15.0%
!! AAGTCAATATATTAATCATA+TGG - chr1_1:18964158-18964177 None:intergenic 15.0%
!!! TTTTTAAATGTGAACTTATA+AGG + chr1_1:18964202-18964221 Msa0012610:intron 15.0%
!!! ATATTGATGTTTTTAGTTTT+AGG - chr1_1:18964398-18964417 None:intergenic 15.0%
!!! CAGCTTATATATTTTTTTTT+TGG + chr1_1:18964422-18964441 Msa0012610:intron 15.0%
!! TGTAAGTTGTATTAATTATT+AGG + chr1_1:18964855-18964874 Msa0012610:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr1_1:18965252-18965271 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr1_1:18965251-18965270 None:intergenic 15.0%
!! TCTTAAAAAATATTAAGTGA+TGG + chr1_1:18965126-18965145 Msa0012610:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr1_1:18965251-18965270 Msa0012610:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr1_1:18965252-18965271 Msa0012610:intron 15.0%
!! AATATGAAAAAAAAAATCCA+AGG - chr1_1:18965431-18965450 None:intergenic 15.0%
!! TAACTAAATACTAATTTAAG+TGG - chr1_1:18965523-18965542 None:intergenic 15.0%
!!! TTTTTCCTTCAAAAAAAATA+TGG + chr1_1:18965570-18965589 Msa0012610:intron 15.0%
!!! TTTTATATTATTATATGGAC+AGG + chr1_1:18965842-18965861 Msa0012610:intron 15.0%
!! AATCATACAATTAAAAGAAA+AGG + chr1_1:18966194-18966213 Msa0012610:intron 15.0%
!!! TTAAGTTTAAAACATGAATT+TGG + chr1_1:18966333-18966352 Msa0012610:intron 15.0%
!!! CAAATAAAACAAGATATTTT+AGG - chr1_1:18966890-18966909 None:intergenic 15.0%
!!! TTTGTTTGATCAATTTTATG+AGG + chr1_1:18961601-18961620 Msa0012610:CDS 20.0%
!! AATATCGATGATTACTTTAA+AGG - chr1_1:18962594-18962613 None:intergenic 20.0%
!! AACACATCATTACTAAAATA+GGG + chr1_1:18962633-18962652 Msa0012610:CDS 20.0%
!! AATGTAAACTTAATTTACCT+TGG - chr1_1:18963111-18963130 None:intergenic 20.0%
!! AAAAAGACTATGTTTGTATT+TGG - chr1_1:18963347-18963366 None:intergenic 20.0%
!!! AAGTTAAGTATTATTTGTTG+TGG - chr1_1:18963382-18963401 None:intergenic 20.0%
!! ATATGATCTTGAATATTTGA+AGG - chr1_1:18963585-18963604 None:intergenic 20.0%
!! AGATTAGTGAAATTTATTAG+AGG + chr1_1:18963628-18963647 Msa0012610:intron 20.0%
!! TGTGAGTACAAAAAATATAT+AGG - chr1_1:18964261-18964280 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr1_1:18964903-18964922 Msa0012610:intron 20.0%
!!! TTGAAACGTTTAAAACATAA+GGG - chr1_1:18965221-18965240 None:intergenic 20.0%
!!! TTGAAACTTTTAAAACGTAA+GGG - chr1_1:18965192-18965211 None:intergenic 20.0%
!!! AAAAAATATTAAGTGATGGA+AGG + chr1_1:18965130-18965149 Msa0012610:intron 20.0%
!!! AAAAATATTAAGTGATGGAA+GGG + chr1_1:18965131-18965150 Msa0012610:intron 20.0%
!!! TTGAAACTTTTAAAACGTAA+GGG + chr1_1:18965192-18965211 Msa0012610:intron 20.0%
!!! TTGAAACGTTTAAAACATAA+TGG + chr1_1:18965221-18965240 Msa0012610:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr1_1:18964903-18964922 None:intergenic 20.0%
!! AAAGAGTTATGCTAATAATT+AGG - chr1_1:18965296-18965315 None:intergenic 20.0%
!!! GAAAAAAACTAAGTTTGTTA+AGG + chr1_1:18965486-18965505 Msa0012610:intron 20.0%
!!! ATAGACCATATTTTTTTTGA+AGG - chr1_1:18965578-18965597 None:intergenic 20.0%
!! TAGCTTCTTTCAATATAATT+AGG + chr1_1:18966051-18966070 Msa0012610:intron 20.0%
!!! TAATCTAAAATTGTTGATGT+CGG - chr1_1:18966423-18966442 None:intergenic 20.0%
!! GATATCTATTATATCTTATG+AGG - chr1_1:18967017-18967036 None:intergenic 20.0%
! AAAGATGGAAATACAATACT+GGG + chr1_1:18961554-18961573 Msa0012610:exon 25.0%
! GATCAAACAAAAATAGCATA+TGG - chr1_1:18961592-18961611 None:intergenic 25.0%
! TGATGAGAAATCTTTAACAA+AGG - chr1_1:18961724-18961743 None:intergenic 25.0%
! TTTGTTAAAGATTTCTCATC+AGG + chr1_1:18961723-18961742 Msa0012610:CDS 25.0%
! TTTGAAGAAAGATGAAGAAA+AGG + chr1_1:18962006-18962025 Msa0012610:intron 25.0%
!! TGATGAGATGTAAATTCTTT+TGG + chr1_1:18962393-18962412 Msa0012610:CDS 25.0%
! GTAATCATCGATATTCTTAT+AGG + chr1_1:18962599-18962618 Msa0012610:CDS 25.0%
! CAACACATCATTACTAAAAT+AGG + chr1_1:18962632-18962651 Msa0012610:CDS 25.0%
! AGCACTATAAATTTCAGTAA+AGG - chr1_1:18962663-18962682 None:intergenic 25.0%
! TAAGAAGATGAAGATCATAT+AGG - chr1_1:18962750-18962769 None:intergenic 25.0%
! AACATTTGCATGCATATAAT+AGG + chr1_1:18962836-18962855 Msa0012610:intron 25.0%
!! TACGATAGGTTGAAATAATT+TGG - chr1_1:18962877-18962896 None:intergenic 25.0%
!!! AGATTTGGTTGATAATATTC+TGG + chr1_1:18962935-18962954 Msa0012610:CDS 25.0%
!!! TAATATTCTGGAATTGAAAG+AGG + chr1_1:18962947-18962966 Msa0012610:CDS 25.0%
! AAGTTTACATTATGTAGGTA+CGG + chr1_1:18963120-18963139 Msa0012610:intron 25.0%
!!! TTAAGTATTATTTGTTGTGG+TGG - chr1_1:18963379-18963398 None:intergenic 25.0%
! AGAAATAAAATGATGAGTGT+CGG - chr1_1:18963904-18963923 None:intergenic 25.0%
!! ATAGTTCTTTTACTTTGACT+GGG - chr1_1:18963954-18963973 None:intergenic 25.0%
!! TATAGTTCTTTTACTTTGAC+TGG - chr1_1:18963955-18963974 None:intergenic 25.0%
! AAGAACTATAGTTATGTTGA+TGG + chr1_1:18963965-18963984 Msa0012610:intron 25.0%
!!! TGTATTAAATTTGTTGCAGA+AGG + chr1_1:18963996-18964015 Msa0012610:intron 25.0%
! TCTTGATGAGATTAAACAAA+TGG + chr1_1:18964068-18964087 Msa0012610:CDS 25.0%
! TCTTTCTCATGTAAGTATAT+TGG + chr1_1:18964095-18964114 Msa0012610:intron 25.0%
! CTTTCTCATGTAAGTATATT+GGG + chr1_1:18964096-18964115 Msa0012610:intron 25.0%
! CTATTTATTATTGCCATTGT+TGG + chr1_1:18964683-18964702 Msa0012610:intron 25.0%
!! TTTTCTTTAATGACCAACAA+TGG - chr1_1:18964699-18964718 None:intergenic 25.0%
!! TTCATCTACTTCATATTTTC+AGG + chr1_1:18964727-18964746 Msa0012610:intron 25.0%
! TCCTACATATTATCCAAATT+CGG + chr1_1:18964807-18964826 Msa0012610:CDS 25.0%
!! CTTGAAACGTTTAAAACATA+AGG - chr1_1:18965220-18965239 None:intergenic 25.0%
!!! ATGTTTTAAACGTTTCAAGT+TGG + chr1_1:18964932-18964951 Msa0012610:intron 25.0%
!!! CTTGAAACTTTTAAAACGTA+AGG - chr1_1:18965191-18965210 None:intergenic 25.0%
!!! ACGTTTTAAAAGTTTCAAGT+TGG + chr1_1:18964961-18964980 Msa0012610:intron 25.0%
!!! ACGTTTTAAAAGTTTCAAGT+TGG - chr1_1:18964961-18964980 None:intergenic 25.0%
!!! CTTGAAACTTTTAAAACGTA+AGG + chr1_1:18965191-18965210 Msa0012610:intron 25.0%
!!! ATGTTTTAAACGTTTCAAGT+TGG - chr1_1:18964932-18964951 None:intergenic 25.0%
! AAATTCCATATTCAATTCCT+TGG + chr1_1:18965411-18965430 Msa0012610:intron 25.0%
! AAAATCCAAGGAATTGAATA+TGG - chr1_1:18965419-18965438 None:intergenic 25.0%
! AAGGAAATGATGTAGAAATA+CGG - chr1_1:18965955-18965974 None:intergenic 25.0%
! AGATTAATTACAAGGAAGAA+TGG - chr1_1:18966266-18966285 None:intergenic 25.0%
!! TGTGTTCTGATTCTTTTTAT+CGG + chr1_1:18966366-18966385 Msa0012610:intron 25.0%
!! GTTAATGACATTTTTCTTGT+TGG - chr1_1:18966517-18966536 None:intergenic 25.0%
! CTAATATATCAATTTCGTGT+AGG + chr1_1:18966713-18966732 Msa0012610:intron 25.0%
CTTCCAAGGCTATATATAAT+GGG + chr1_1:18961290-18961309 Msa0012610:intron 30.0%
TAACCCATTATATATAGCCT+TGG - chr1_1:18961296-18961315 None:intergenic 30.0%
ATAAAAGACACCTTCACAAA+AGG - chr1_1:18961331-18961350 None:intergenic 30.0%
!!! ACACCAACTACTTTTTATGA+AGG + chr1_1:18961380-18961399 Msa0012610:intron 30.0%
ACACCTTCATAAAAAGTAGT+TGG - chr1_1:18961386-18961405 None:intergenic 30.0%
CAAAGATGGAAATACAATAC+TGG + chr1_1:18961553-18961572 Msa0012610:exon 30.0%
AAAAACATCTAGTGTAGTCA+AGG + chr1_1:18962053-18962072 Msa0012610:intron 30.0%
AAAACATCTAGTGTAGTCAA+GGG + chr1_1:18962054-18962073 Msa0012610:intron 30.0%
!!! AACGATGAGACTTTTAAGAT+CGG + chr1_1:18962347-18962366 Msa0012610:CDS 30.0%
TTAATCTCAGTTCTTACCAT+GGG + chr1_1:18962452-18962471 Msa0012610:CDS 30.0%
!! GGTACATTTCTAAAGTATTG+TGG - chr1_1:18962478-18962497 None:intergenic 30.0%
AGACATTGTGATCAATTCTT+TGG + chr1_1:18962511-18962530 Msa0012610:CDS 30.0%
TCATATAGGAATACATTACC+AGG - chr1_1:18962736-18962755 None:intergenic 30.0%
TATATGCATGCAAATGTTGA+TGG - chr1_1:18962834-18962853 None:intergenic 30.0%
TATAATTGACCACATCATAC+CGG - chr1_1:18963054-18963073 None:intergenic 30.0%
!! TTGGCTCTTTTCAAAATATG+TGG - chr1_1:18963092-18963111 None:intergenic 30.0%
!! ACATATTTTGAAAAGAGCCA+AGG + chr1_1:18963091-18963110 Msa0012610:CDS 30.0%
!!! ACTGCTTGTACTTTTTTTAG+TGG - chr1_1:18963281-18963300 None:intergenic 30.0%
! AAAAAAGTACAAGCAGTTCA+AGG + chr1_1:18963284-18963303 Msa0012610:intron 30.0%
! ATTTGGTGAACATTTGTGTT+GGG - chr1_1:18963330-18963349 None:intergenic 30.0%
! TATTTGGTGAACATTTGTGT+TGG - chr1_1:18963331-18963350 None:intergenic 30.0%
TGTGTAATGAGCGAAATAAT+AGG - chr1_1:18963449-18963468 None:intergenic 30.0%
! TTCATACTCTCGCTATATTT+TGG - chr1_1:18963689-18963708 None:intergenic 30.0%
GAAATAAAATGATGAGTGTC+GGG - chr1_1:18963903-18963922 None:intergenic 30.0%
!! AAGACTTAATACTTTTTGCG+TGG - chr1_1:18964052-18964071 None:intergenic 30.0%
GCAAGAACATAACATAAGTT+TGG - chr1_1:18964448-18964467 None:intergenic 30.0%
TTCTTGCTTATACATAAAGC+CGG + chr1_1:18964461-18964480 Msa0012610:intron 30.0%
TGTTGCAATGCATTACATAT+AGG + chr1_1:18964549-18964568 Msa0012610:intron 30.0%
AAAAGAGATGTTACCATCAA+TGG + chr1_1:18964628-18964647 Msa0012610:CDS 30.0%
TCAGGTTATATAATACCGAA+AGG + chr1_1:18964745-18964764 Msa0012610:intron 30.0%
GTTATATAATACCGAAAGGA+TGG + chr1_1:18964749-18964768 Msa0012610:CDS 30.0%
CCTACATATTATCCAAATTC+GGG + chr1_1:18964808-18964827 Msa0012610:CDS 30.0%
TGAATTTAACCCATCAAGAT+GGG + chr1_1:18964831-18964850 Msa0012610:CDS 30.0%
!! AAGATTTGGGTTGACAATAT+GGG - chr1_1:18965110-18965129 None:intergenic 30.0%
!! TAAGATTTGGGTTGACAATA+TGG - chr1_1:18965111-18965130 None:intergenic 30.0%
AAAGATATACGGACAATGTA+AGG + chr1_1:18965641-18965660 Msa0012610:intron 30.0%
GAACTCACTTGTAATTAAGA+AGG - chr1_1:18965974-18965993 None:intergenic 30.0%
AATTACAAGTGAGTTCTTAC+TGG + chr1_1:18965978-18965997 Msa0012610:intron 30.0%
!!! ACATTTTTCTTGTTGGCTTA+TGG - chr1_1:18966510-18966529 None:intergenic 30.0%
TAGTTGTTTGTTTCATCACT+TGG + chr1_1:18966832-18966851 Msa0012610:exon 30.0%
!! AGTCTTATGTATTTTGAACG+AGG - chr1_1:18966939-18966958 None:intergenic 30.0%
CGTTCAAAATACATAAGACT+TGG + chr1_1:18966939-18966958 Msa0012610:three_prime_UTR 30.0%
! ATAGAAGACACCTTTTGTGA+AGG + chr1_1:18961318-18961337 Msa0012610:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr1_1:18961429-18961448 Msa0012610:intron 35.0%
! TTTTATCAAGTCACACCTCA+AGG - chr1_1:18961447-18961466 None:intergenic 35.0%
!!! CACCACACTACTTTTTATGA+AGG + chr1_1:18961469-18961488 Msa0012610:intron 35.0%
CACCTTCATAAAAAGTAGTG+TGG - chr1_1:18961474-18961493 None:intergenic 35.0%
TGGAAATACAATACTGGGTT+TGG + chr1_1:18961559-18961578 Msa0012610:CDS 35.0%
TTATGAGGAGATTAACTGAG+TGG + chr1_1:18961616-18961635 Msa0012610:CDS 35.0%
GTCAACATATTGCCAATAAG+TGG - chr1_1:18961702-18961721 None:intergenic 35.0%
! TGTTGATGAATGAATCAGGA+TGG - chr1_1:18961749-18961768 None:intergenic 35.0%
! AGGTTGTTGATGAATGAATC+AGG - chr1_1:18961753-18961772 None:intergenic 35.0%
GTGAAGAAGAAGAATCTCAA+GGG - chr1_1:18961802-18961821 None:intergenic 35.0%
TGTGAAGAAGAAGAATCTCA+AGG - chr1_1:18961803-18961822 None:intergenic 35.0%
ACATGTTGTAAGCCGTATAT+TGG + chr1_1:18961879-18961898 Msa0012610:intron 35.0%
!! TTCGCAAAAGTACCATAAAC+TGG - chr1_1:18961915-18961934 None:intergenic 35.0%
ATAAATTCCCCTGTAACTCA+TGG + chr1_1:18961944-18961963 Msa0012610:intron 35.0%
ATCAGTTTCCATGAGTTACA+GGG - chr1_1:18961955-18961974 None:intergenic 35.0%
ACTCATGGAAACTGATGAAT+CGG + chr1_1:18961959-18961978 Msa0012610:intron 35.0%
AGATGAAGAAAAGGTTGAGT+AGG + chr1_1:18962015-18962034 Msa0012610:intron 35.0%
ATAATTTAGCCACGCCAAAA+TGG - chr1_1:18962094-18962113 None:intergenic 35.0%
AAATAATACTGTTCGGTCTC+TGG + chr1_1:18962150-18962169 Msa0012610:intron 35.0%
!! CACTTGCTAGCTTATGTTTT+AGG + chr1_1:18962234-18962253 Msa0012610:intron 35.0%
!! GCTAGCTTATGTTTTAGGTA+TGG + chr1_1:18962239-18962258 Msa0012610:intron 35.0%
!! TGTTTTAGGTATGGAAGAAC+TGG + chr1_1:18962248-18962267 Msa0012610:intron 35.0%
ATCTACAAGTCACACTTGTT+TGG + chr1_1:18962272-18962291 Msa0012610:CDS 35.0%
TCTACAAGTCACACTTGTTT+GGG + chr1_1:18962273-18962292 Msa0012610:CDS 35.0%
TTTGTGATGCTGATATGTGT+AGG + chr1_1:18962312-18962331 Msa0012610:CDS 35.0%
!!! ATCACTTCCATAGTGGATTT+TGG - chr1_1:18962377-18962396 None:intergenic 35.0%
CTTAATCTCAGTTCTTACCA+TGG + chr1_1:18962451-18962470 Msa0012610:CDS 35.0%
AGAAATGTACCTAACTCGTA+TGG + chr1_1:18962487-18962506 Msa0012610:CDS 35.0%
CATTGTGATCAATTCTTTGG+AGG + chr1_1:18962514-18962533 Msa0012610:CDS 35.0%
TCTCTTTCAAAAACTCCACT+GGG - chr1_1:18962559-18962578 None:intergenic 35.0%
ATCTCTTTCAAAAACTCCAC+TGG - chr1_1:18962560-18962579 None:intergenic 35.0%
TTCAACCTATCGTAGAAGAA+AGG + chr1_1:18962883-18962902 Msa0012610:CDS 35.0%
CTGGAATTGAAAGAGGAAAA+CGG + chr1_1:18962954-18962973 Msa0012610:CDS 35.0%
AATTGAAAGAGGAAAACGGT+TGG + chr1_1:18962958-18962977 Msa0012610:CDS 35.0%
GACATCATTGACATGTTGAT+AGG + chr1_1:18962996-18963015 Msa0012610:CDS 35.0%
!! TTGATAGGTTTTGTACTTGC+TGG + chr1_1:18963011-18963030 Msa0012610:CDS 35.0%
TTCAAGGAATACACGACAAA+GGG + chr1_1:18963300-18963319 Msa0012610:intron 35.0%
TACACAAAGTCCATACAGTA+AGG + chr1_1:18963463-18963482 Msa0012610:intron 35.0%
GGAAATCATGAAGAGAAGAA+TGG + chr1_1:18964026-18964045 Msa0012610:CDS 35.0%
TCTTGCTTATACATAAAGCC+GGG + chr1_1:18964462-18964481 Msa0012610:intron 35.0%
TTGCGAAGTTTATACTCACA+AGG - chr1_1:18964594-18964613 None:intergenic 35.0%
ATGTTACCATCAATGGTTTG+TGG + chr1_1:18964635-18964654 Msa0012610:intron 35.0%
ATGTGAATAGCTCTTAACCA+AGG - chr1_1:18964784-18964803 None:intergenic 35.0%
TTGGTTAAGAGCTATTCACA+TGG + chr1_1:18964783-18964802 Msa0012610:CDS 35.0%
CCCGAATTTGGATAATATGT+AGG - chr1_1:18964811-18964830 None:intergenic 35.0%
GTGAATTTAACCCATCAAGA+TGG + chr1_1:18964830-18964849 Msa0012610:CDS 35.0%
AACTTACATCCCATCTTGAT+GGG - chr1_1:18964843-18964862 None:intergenic 35.0%
! TTCCAACGTGAGTAATGTTT+TGG - chr1_1:18964988-18965007 None:intergenic 35.0%
! TTCAAACGTGAGTAACGTTT+TGG + chr1_1:18965163-18965182 Msa0012610:intron 35.0%
GAGAGTAATTCTTTGGCATT+TGG + chr1_1:18966291-18966310 Msa0012610:intron 35.0%
! AACATTGACAATGATGGTGA+TGG + chr1_1:18966392-18966411 Msa0012610:intron 35.0%
TATATCAATTTCGTGTAGGC+TGG + chr1_1:18966717-18966736 Msa0012610:intron 35.0%
AAGCTAGTAATAGGACAATC+TGG - chr1_1:18966754-18966773 None:intergenic 35.0%
AAACCTTTATCACCTTAGCA+AGG - chr1_1:18966804-18966823 None:intergenic 35.0%
! TCATCAACAACCTTGTTTCC+AGG + chr1_1:18961760-18961779 Msa0012610:CDS 40.0%
ATGAAAGAGACCTGGAAACA+AGG - chr1_1:18961773-18961792 None:intergenic 40.0%
GGTACGCAAGTACCAATATA+CGG - chr1_1:18961894-18961913 None:intergenic 40.0%
TCAGTTTCCATGAGTTACAG+GGG - chr1_1:18961954-18961973 None:intergenic 40.0%
CATCAGTTTCCATGAGTTAC+AGG - chr1_1:18961956-18961975 None:intergenic 40.0%
! GCATCACAAATGATGATGCT+TGG - chr1_1:18962302-18962321 None:intergenic 40.0%
CGGTTATCCAAAATCCACTA+TGG + chr1_1:18962367-18962386 Msa0012610:CDS 40.0%
ACATCTCATCACTTCCATAG+TGG - chr1_1:18962384-18962403 None:intergenic 40.0%
!! TTCTAAAGTATTGTGGCCCA+TGG - chr1_1:18962471-18962490 None:intergenic 40.0%
CAATGTCTTCCATACGAGTT+AGG - chr1_1:18962499-18962518 None:intergenic 40.0%
TTCTAGTATGAATCACCCAG+TGG + chr1_1:18962541-18962560 Msa0012610:CDS 40.0%
GCAAAACCAGGAAGGTTAAT+GGG - chr1_1:18962698-18962717 None:intergenic 40.0%
AGCAAAACCAGGAAGGTTAA+TGG - chr1_1:18962699-18962718 None:intergenic 40.0%
TATGGAAAGCAAAACCAGGA+AGG - chr1_1:18962706-18962725 None:intergenic 40.0%
CCTTTATGGAAAGCAAAACC+AGG - chr1_1:18962710-18962729 None:intergenic 40.0%
!!! CCTGGTTTTGCTTTCCATAA+AGG + chr1_1:18962707-18962726 Msa0012610:CDS 40.0%
ACATTACCAGGAGTCCTTTA+TGG - chr1_1:18962724-18962743 None:intergenic 40.0%
AACCTATCGTAGAAGAAAGG+AGG + chr1_1:18962886-18962905 Msa0012610:CDS 40.0%
AACCTCCTTTCTTCTACGAT+AGG - chr1_1:18962891-18962910 None:intergenic 40.0%
GTTCAAGGAATACACGACAA+AGG + chr1_1:18963299-18963318 Msa0012610:intron 40.0%
! TTGTTTGGCTCCTTACTGTA+TGG - chr1_1:18963476-18963495 None:intergenic 40.0%
ACTCAGTTTACTTTCTCCAC+AGG - chr1_1:18963531-18963550 None:intergenic 40.0%
!! AAATTTGTTGCAGAAGGAGC+AGG + chr1_1:18964002-18964021 Msa0012610:intron 40.0%
GGGAATTCTCATATGTGTGT+TGG + chr1_1:18964116-18964135 Msa0012610:intron 40.0%
CTTGCTTATACATAAAGCCG+GGG + chr1_1:18964463-18964482 Msa0012610:intron 40.0%
TTGCTTATACATAAAGCCGG+GGG + chr1_1:18964464-18964483 Msa0012610:intron 40.0%
GATAAGACTATATACACCCC+CGG - chr1_1:18964483-18964502 None:intergenic 40.0%
CACAAGGCGTAACATTTCAT+TGG - chr1_1:18964578-18964597 None:intergenic 40.0%
!! AAACTTCGCAAGTTTTCGAG+AGG + chr1_1:18964603-18964622 Msa0012610:CDS 40.0%
GAATAGCCACAAACCATTGA+TGG - chr1_1:18964644-18964663 None:intergenic 40.0%
GGTAACACTTTCCATCCTTT+CGG - chr1_1:18964763-18964782 None:intergenic 40.0%
!! AAGGATGGAAAGTGTTACCT+TGG + chr1_1:18964764-18964783 Msa0012610:CDS 40.0%
GGGTTAAATTCACCCGAATT+TGG - chr1_1:18964823-18964842 None:intergenic 40.0%
CAACTTACATCCCATCTTGA+TGG - chr1_1:18964844-18964863 None:intergenic 40.0%
GTCCAAAACATTACTCACGT+TGG + chr1_1:18964983-18965002 Msa0012610:intron 40.0%
CTCAATATCATGTCGCGAAA+GGG - chr1_1:18965020-18965039 None:intergenic 40.0%
ACTCAATATCATGTCGCGAA+AGG - chr1_1:18965021-18965040 None:intergenic 40.0%
AGGATCACAATGCCAAAGTT+GGG + chr1_1:18965862-18965881 Msa0012610:intron 40.0%
TACTTCCTGCTCCAAAAGAA+AGG - chr1_1:18965893-18965912 None:intergenic 40.0%
! CTCTGAACACACAATTTGCT+TGG - chr1_1:18966539-18966558 None:intergenic 40.0%
! GGTGATGGTAAGCTAGTAAT+AGG - chr1_1:18966763-18966782 None:intergenic 40.0%
TTAGCAAGGCAATTGTCTCT+GGG - chr1_1:18966790-18966809 None:intergenic 40.0%
TTGCCTTGCTAAGGTGATAA+AGG + chr1_1:18966798-18966817 Msa0012610:CDS 40.0%
CATATGGGATGGCCACTTAT+TGG + chr1_1:18961687-18961706 Msa0012610:CDS 45.0%
GGCAGAAAATGAAAGAGACC+TGG - chr1_1:18961781-18961800 None:intergenic 45.0%
GGTACTTGCGTACCAGTTTA+TGG + chr1_1:18961900-18961919 Msa0012610:intron 45.0%
ACATCTAGTGTAGTCAAGGG+CGG + chr1_1:18962057-18962076 Msa0012610:intron 45.0%
! CGGATTCAGACGTACCATTT+TGG + chr1_1:18962077-18962096 Msa0012610:intron 45.0%
GCGCATGTAAGTGTGTGTTT+AGG - chr1_1:18962182-18962201 None:intergenic 45.0%
TCTATGCCCATTAACCTTCC+TGG + chr1_1:18962689-18962708 Msa0012610:CDS 45.0%
TGCTTTCCATAAAGGACTCC+TGG + chr1_1:18962715-18962734 Msa0012610:CDS 45.0%
ATAATAGGCACGTGAGAAGC+TGG + chr1_1:18962851-18962870 Msa0012610:intron 45.0%
TCAATGATGTCCTCATCCTC+AGG - chr1_1:18962987-18963006 None:intergenic 45.0%
ATACTAGTCCCCTTACCACA+AGG + chr1_1:18963242-18963261 Msa0012610:intron 45.0%
TTCGATACGCCTTGTGGTAA+GGG - chr1_1:18963254-18963273 None:intergenic 45.0%
TGGTGAACATTTGTGTTGGG+CGG - chr1_1:18963327-18963346 None:intergenic 45.0%
CAGTTTACTTTCTCCACAGG+TGG - chr1_1:18963528-18963547 None:intergenic 45.0%
CAGGATCACAATGCCAAAGT+TGG + chr1_1:18965861-18965880 Msa0012610:intron 45.0%
AGAAAGGAAGGTCCCAACTT+TGG - chr1_1:18965877-18965896 None:intergenic 45.0%
! GTTGGGACCTTCCTTTCTTT+TGG + chr1_1:18965879-18965898 Msa0012610:CDS 45.0%
!!! ACCTTCCTTTCTTTTGGAGC+AGG + chr1_1:18965885-18965904 Msa0012610:CDS 45.0%
TCCTGCTCCAAAAGAAAGGA+AGG - chr1_1:18965889-18965908 None:intergenic 45.0%
! CAGGAAGTATGTATTGCCCT+GGG + chr1_1:18965904-18965923 Msa0012610:CDS 45.0%
! TTTTTGCCAAGTCACTCCCA+GGG - chr1_1:18965923-18965942 None:intergenic 45.0%
! ATTTTTGCCAAGTCACTCCC+AGG - chr1_1:18965924-18965943 None:intergenic 45.0%
CGGTGCAACATTGACAATGA+TGG + chr1_1:18966386-18966405 Msa0012610:intron 45.0%
CTTAGCAAGGCAATTGTCTC+TGG - chr1_1:18966791-18966810 None:intergenic 45.0%
CAGAGACAATTGCCTTGCTA+AGG + chr1_1:18966789-18966808 Msa0012610:CDS 45.0%
!! ATATATATATATATATTAGA+AGG + chr1_1:18965789-18965808 Msa0012610:intron 5.0%
!! TCAGACGTACCATTTTGGCG+TGG + chr1_1:18962082-18962101 Msa0012610:intron 50.0%
GGAAAACGGTTGGAAACCTG+AGG + chr1_1:18962968-18962987 Msa0012610:CDS 50.0%
GGTCATGAAGCCATAGCAAC+CGG + chr1_1:18963032-18963051 Msa0012610:CDS 50.0%
! CCACATCATACCGGTTGCTA+TGG - chr1_1:18963045-18963064 None:intergenic 50.0%
CCATAGCAACCGGTATGATG+TGG + chr1_1:18963042-18963061 Msa0012610:CDS 50.0%
TCGATACGCCTTGTGGTAAG+GGG - chr1_1:18963253-18963272 None:intergenic 50.0%
CTTCGATACGCCTTGTGGTA+AGG - chr1_1:18963255-18963274 None:intergenic 50.0%
TACCACAAGGCGTATCGAAG+AGG + chr1_1:18963255-18963274 Msa0012610:intron 50.0%
GGTGAACATTTGTGTTGGGC+GGG - chr1_1:18963326-18963345 None:intergenic 50.0%
CAGTAAGGAGCCAAACAAGC+TGG + chr1_1:18963478-18963497 Msa0012610:intron 50.0%
TAAGGAGCCAAACAAGCTGG+AGG + chr1_1:18963481-18963500 Msa0012610:intron 50.0%
! GGTCTTTCCTCCAGCTTGTT+TGG - chr1_1:18963491-18963510 None:intergenic 50.0%
CAGGTGGTATGAAATCGCGA+AGG - chr1_1:18963512-18963531 None:intergenic 50.0%
TCGCGATTTCATACCACCTG+TGG + chr1_1:18963512-18963531 Msa0012610:intron 50.0%
TTTGTTGCAGAAGGAGCAGG+AGG + chr1_1:18964005-18964024 Msa0012610:intron 50.0%
! GCAGGAAGTATGTATTGCCC+TGG + chr1_1:18965903-18965922 Msa0012610:CDS 50.0%
! TTGTCTCTGGGCTTTGGTGA+TGG - chr1_1:18966778-18966797 None:intergenic 50.0%
AGGCAATTGTCTCTGGGCTT+TGG - chr1_1:18966784-18966803 None:intergenic 50.0%
ATACACTACCCACTGCCTCC+TGG + chr1_1:18961663-18961682 Msa0012610:CDS 55.0%
CCATATGACCAGGAGGCAGT+GGG - chr1_1:18961674-18961693 None:intergenic 55.0%
CCACTGCCTCCTGGTCATAT+GGG + chr1_1:18961672-18961691 Msa0012610:CDS 55.0%
TGCCTCCTGGTCATATGGGA+TGG + chr1_1:18961676-18961695 Msa0012610:CDS 55.0%
AGTGGCCATCCCATATGACC+AGG - chr1_1:18961684-18961703 None:intergenic 55.0%
CGGTTGGAAACCTGAGGATG+AGG + chr1_1:18962974-18962993 Msa0012610:CDS 55.0%
GTATTGCCCTGGGAGTGACT+TGG + chr1_1:18965914-18965933 Msa0012610:CDS 55.0%
CCCACTGCCTCCTGGTCATA+TGG + chr1_1:18961671-18961690 Msa0012610:CDS 60.0%
CCCATATGACCAGGAGGCAG+TGG - chr1_1:18961675-18961694 None:intergenic 60.0%
GGCCATCCCATATGACCAGG+AGG - chr1_1:18961681-18961700 None:intergenic 60.0%
GGCCTCTTCGATACGCCTTG+TGG - chr1_1:18963260-18963279 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 18961290 18967040 18961290 ID=Msa0012610;Name=Msa0012610
chr1_1 mRNA 18961290 18967040 18961290 ID=Msa0012610-mRNA-1;Parent=Msa0012610;Name=Msa0012610-mRNA-1;_AED=0.12;_eAED=0.12;_QI=59|1|1|1|0.87|0.77|9|206|485
chr1_1 exon 18961290 18961304 18961290 ID=Msa0012610-mRNA-1:exon:6978;Parent=Msa0012610-mRNA-1
chr1_1 exon 18961514 18961781 18961514 ID=Msa0012610-mRNA-1:exon:6979;Parent=Msa0012610-mRNA-1
chr1_1 exon 18962256 18962736 18962256 ID=Msa0012610-mRNA-1:exon:6980;Parent=Msa0012610-mRNA-1
chr1_1 exon 18962858 18963112 18962858 ID=Msa0012610-mRNA-1:exon:6981;Parent=Msa0012610-mRNA-1
chr1_1 exon 18964015 18964104 18964015 ID=Msa0012610-mRNA-1:exon:6982;Parent=Msa0012610-mRNA-1
chr1_1 exon 18964571 18964649 18964571 ID=Msa0012610-mRNA-1:exon:6983;Parent=Msa0012610-mRNA-1
chr1_1 exon 18964749 18964855 18964749 ID=Msa0012610-mRNA-1:exon:6984;Parent=Msa0012610-mRNA-1
chr1_1 exon 18965864 18965985 18965864 ID=Msa0012610-mRNA-1:exon:6985;Parent=Msa0012610-mRNA-1
chr1_1 exon 18966735 18967040 18966735 ID=Msa0012610-mRNA-1:exon:6986;Parent=Msa0012610-mRNA-1
chr1_1 five_prime_UTR 18961290 18961304 18961290 ID=Msa0012610-mRNA-1:five_prime_utr;Parent=Msa0012610-mRNA-1
chr1_1 five_prime_UTR 18961514 18961557 18961514 ID=Msa0012610-mRNA-1:five_prime_utr;Parent=Msa0012610-mRNA-1
chr1_1 CDS 18961558 18961781 18961558 ID=Msa0012610-mRNA-1:cds;Parent=Msa0012610-mRNA-1
chr1_1 CDS 18962256 18962736 18962256 ID=Msa0012610-mRNA-1:cds;Parent=Msa0012610-mRNA-1
chr1_1 CDS 18962858 18963112 18962858 ID=Msa0012610-mRNA-1:cds;Parent=Msa0012610-mRNA-1
chr1_1 CDS 18964015 18964104 18964015 ID=Msa0012610-mRNA-1:cds;Parent=Msa0012610-mRNA-1
chr1_1 CDS 18964571 18964649 18964571 ID=Msa0012610-mRNA-1:cds;Parent=Msa0012610-mRNA-1
chr1_1 CDS 18964749 18964855 18964749 ID=Msa0012610-mRNA-1:cds;Parent=Msa0012610-mRNA-1
chr1_1 CDS 18965864 18965985 18965864 ID=Msa0012610-mRNA-1:cds;Parent=Msa0012610-mRNA-1
chr1_1 CDS 18966735 18966834 18966735 ID=Msa0012610-mRNA-1:cds;Parent=Msa0012610-mRNA-1
chr1_1 three_prime_UTR 18966835 18967040 18966835 ID=Msa0012610-mRNA-1:three_prime_utr;Parent=Msa0012610-mRNA-1
Gene Sequence

>Msa0012610

ATGGAAATACAATACTGGGTTTGGATGTGTGCCATATGCTATTTTTGTTTGATCAATTTTATGAGGAGATTAACTGAGTGGTATTATAATATGAAACTTAGAAAGATACACTACCCACTGCCTCCTGGTCATATGGGATGGCCACTTATTGGCAATATGTTGACCTTTGTTAAAGATTTCTCATCAGGCCATCCTGATTCATTCATCAACAACCTTGTTTCCAGGTATGGAAGAACTGGTATCTACAAGTCACACTTGTTTGGGAGTCCAAGCATCATCATTTGTGATGCTGATATGTGTAGGCAAGTGCTAACAAACGATGAGACTTTTAAGATCGGTTATCCAAAATCCACTATGGAAGTGATGAGATGTAAATTCTTTTGGAGATCATCTCGAGAAGAACATAAGCGTATGAGACGCTTAATCTCAGTTCTTACCATGGGCCACAATACTTTAGAAATGTACCTAACTCGTATGGAAGACATTGTGATCAATTCTTTGGAGGAAATTTCTAGTATGAATCACCCAGTGGAGTTTTTGAAAGAGATGAAGAATATTTCCTTTAAAGTAATCATCGATATTCTTATAGGCTCTTACAATCAACACATCATTACTAAAATAGGGAATTCCTTTACTGAAATTTATAGTGCTCTATTCTCTATGCCCATTAACCTTCCTGGTTTTGCTTTCCATAAAGGACTCCTGGCACGTGAGAAGCTGGCCAAATTATTTCAACCTATCGTAGAAGAAAGGAGGTTGATGAAAACAAATAGTAACAAAAAAGATTTGGTTGATAATATTCTGGAATTGAAAGAGGAAAACGGTTGGAAACCTGAGGATGAGGACATCATTGACATGTTGATAGGTTTTGTACTTGCTGGTCATGAAGCCATAGCAACCGGTATGATGTGGTCAATTATATATCTCACGCAGAATCCACATATTTTGAAAAGAGCCAAGAAGGAGCAGGAGGAAATCATGAAGAGAAGAATGGCCACGCAAAAAGTATTAAGTCTTGATGAGATTAAACAAATGGTTTATCTTTCTCATGTAACCAATGAAATGTTACGCCTTGTGAGTATAAACTTCGCAAGTTTTCGAGAGGCAAAAAGAGATGTTACCATCAATGGTTATATAATACCGAAAGGATGGAAAGTGTTACCTTGGTTAAGAGCTATTCACATGGATCCTACATATTATCCAAATTCGGGTGAATTTAACCCATCAAGATGGGATGATCACAATGCCAAAGTTGGGACCTTCCTTTCTTTTGGAGCAGGAAGTATGTATTGCCCTGGGAGTGACTTGGCAAAAATTGAAATTTCCGTATTTCTACATCATTTCCTTCTTAATTACAAGCTGGAGCGAGTAAATCCAGATTGTCCTATTACTAGCTTACCATCACCAAAGCCCAGAGACAATTGCCTTGCTAAGGTGATAAAGGTTTCAAGTGCATAG
Protein sequence

>Msa0012610

MEIQYWVWMCAICYFCLINFMRRLTEWYYNMKLRKIHYPLPPGHMGWPLIGNMLTFVKDFSSGHPDSFINNLVSRYGRTGIYKSHLFGSPSIIICDADMCRQVLTNDETFKIGYPKSTMEVMRCKFFWRSSREEHKRMRRLISVLTMGHNTLEMYLTRMEDIVINSLEEISSMNHPVEFLKEMKNISFKVIIDILIGSYNQHIITKIGNSFTEIYSALFSMPINLPGFAFHKGLLAREKLAKLFQPIVEERRLMKTNSNKKDLVDNILELKEENGWKPEDEDIIDMLIGFVLAGHEAIATGMMWSIIYLTQNPHILKRAKKEQEEIMKRRMATQKVLSLDEIKQMVYLSHVTNEMLRLVSINFASFREAKRDVTINGYIIPKGWKVLPWLRAIHMDPTYYPNSGEFNPSRWDDHNAKVGTFLSFGAGSMYCPGSDLAKIEISVFLHHFLLNYKLERVNPDCPITSLPSPKPRDNCLAKVIKVSSA*