AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0752450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752450 MtrunA17_Chr5g0393391 93.243 740 26 6 1 731 1 725 0.0 1206
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752450 AT5G25070.1 44.695 754 364 11 3 726 1 731 7.83e-169 503

Find 155 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCGCTGGTTGTTCAATT+TGG 0.072315 5_2:-6099486 None:intergenic
CTTCACAAGCTTGTTCTAAT+TGG 0.219788 5_2:-6100134 None:intergenic
AAGAAACGTTCCAGAAAATA+AGG 0.230695 5_2:+6099971 Msa0752450:CDS
CATAACATGTATCACAAAAT+TGG 0.238322 5_2:-6102820 None:intergenic
CGGAAGACATTTCAAATTTA+CGG 0.241495 5_2:+6102631 Msa0752450:CDS
CTTCGACATCACCCATTTCT+TGG 0.247970 5_2:-6102530 None:intergenic
CTCCGCTGGTTGTTCAATTT+GGG 0.269064 5_2:-6099485 None:intergenic
GATTGAGTTGGAATTGGAAT+TGG 0.272434 5_2:+6099381 Msa0752450:five_prime_UTR
TGCTGCCAGAGCTTCCTTGC+AGG 0.286964 5_2:+6101484 Msa0752450:CDS
ATTTAGCCTCACTAGCTATT+CGG 0.313696 5_2:-6102299 None:intergenic
ATATATATTGTGTACGATAT+TGG 0.337605 5_2:+6102858 Msa0752450:three_prime_UTR
ATTGAGTTGGAATTGGAATT+GGG 0.344071 5_2:+6099382 Msa0752450:five_prime_UTR
CAATGATGTTGCTTTCTTCA+TGG 0.350218 5_2:-6100844 None:intergenic
CATGGAAGGTGGCGGAGATA+TGG 0.351142 5_2:+6099423 Msa0752450:CDS
CTTCTTCAGTGACAGAGTTT+CGG 0.353431 5_2:-6101240 None:intergenic
AATTGATAACCTTCTCGTTC+AGG 0.357533 5_2:+6101268 Msa0752450:CDS
AAGCTTGAGGAAGAAATTAA+AGG 0.359557 5_2:+6102384 Msa0752450:CDS
GAAAATAATCCTCTGCTTGA+AGG 0.366556 5_2:-6102202 None:intergenic
ACGGAAAGATTTGATTTCAA+TGG 0.376880 5_2:+6102650 Msa0752450:CDS
TGAAGGATGCTATGTCTTGC+TGG 0.381178 5_2:-6102185 None:intergenic
TGTATTGATTGAGTTGGAAT+TGG 0.381748 5_2:+6099375 Msa0752450:five_prime_UTR
CAAATCTAAAGCATCGATAA+AGG 0.394085 5_2:-6100253 None:intergenic
GAGTGTGCTAATGGATGAAT+TGG 0.396769 5_2:+6101040 Msa0752450:CDS
AAAAGCAGCTGCCCAAGAAA+TGG 0.401381 5_2:+6102518 Msa0752450:CDS
GGTTGTTCAATTTGGGCAGC+AGG 0.401748 5_2:-6099478 None:intergenic
TTCTTCTCCTCCTCCTCCGC+TGG 0.406323 5_2:-6099499 None:intergenic
TTCGACATCACCCATTTCTT+GGG 0.407089 5_2:-6102529 None:intergenic
TAACATTGAGCTTTCAATAG+AGG 0.407824 5_2:+6100980 Msa0752450:CDS
AGTACTAACGACGAGGGAAT+CGG 0.409750 5_2:-6099812 None:intergenic
AAGATAAATAATGTCGTCTC+TGG 0.411416 5_2:+6101140 Msa0752450:CDS
TTTAGCCTCACTAGCTATTC+GGG 0.411756 5_2:-6102298 None:intergenic
TCAACCATTGAGGTGAAGTA+TGG 0.417837 5_2:+6101179 Msa0752450:CDS
AGGCACCCTTGATAAATTGC+AGG 0.418273 5_2:+6102404 Msa0752450:CDS
AAAGAATGGGAGCAAAACTT+AGG 0.430881 5_2:+6101294 Msa0752450:CDS
TACTATCACTAGATGGTTGT+TGG 0.432236 5_2:-6099840 None:intergenic
AGGAGGAAGCTAAAGGATAC+AGG 0.435555 5_2:+6101336 Msa0752450:CDS
TAAAAGAAAGAGTGTGCTAA+TGG 0.437544 5_2:+6101031 Msa0752450:CDS
ATCAGCTTGTCTCAATGATT+CGG 0.437966 5_2:-6100229 None:intergenic
CAGTCTCCTGCAATTTATCA+AGG 0.444642 5_2:-6102410 None:intergenic
GTACTAACGACGAGGGAATC+GGG 0.448073 5_2:-6099811 None:intergenic
CAAAACTTAGGGAATTTGCT+AGG 0.448557 5_2:+6101306 Msa0752450:CDS
ATTAACCTGCAAGGAAGCTC+TGG 0.449548 5_2:-6101489 None:intergenic
GGATTCACTGTTTGAAGGGA+TGG 0.449967 5_2:+6099444 Msa0752450:CDS
GAAGCTGATGCAGCTGCTGC+AGG 0.450176 5_2:-6099550 None:intergenic
CGTTGATGTTGATGTTGATC+TGG 0.451602 5_2:+6099744 Msa0752450:CDS
CTCTGCATCTTCTGCTCGAA+AGG 0.452472 5_2:+6100038 Msa0752450:CDS
AAACACTGTATTGATTGAGT+TGG 0.466731 5_2:+6099369 Msa0752450:five_prime_UTR
TCTCGTTCAGGAAGAAAGAA+TGG 0.469047 5_2:+6101280 Msa0752450:CDS
TCGATCAACATACAATTTCA+AGG 0.470108 5_2:+6102608 Msa0752450:CDS
AACAATGAAGAAAAGCTCTC+TGG 0.470326 5_2:+6101431 Msa0752450:CDS
CGAAACTCTGTCACTGAAGA+AGG 0.470630 5_2:+6101241 Msa0752450:CDS
TCTTGCTTCTCTTAAATACA+TGG 0.470663 5_2:+6100101 Msa0752450:CDS
ATGTCATCTATACTGAAGTC+CGG 0.471801 5_2:+6101386 Msa0752450:CDS
TCCTTCTCCTTCTCCTTCGC+CGG 0.472966 5_2:+6099774 Msa0752450:CDS
TACTGCTGCAAGGAATTTCA+AGG 0.474319 5_2:+6102269 Msa0752450:CDS
TCTGGCTTGAGGATAGGTTA+TGG 0.475732 5_2:+6099703 Msa0752450:CDS
ACGAGGGAATCGGGAATATG+AGG 0.480087 5_2:-6099802 None:intergenic
TTTGCCATACTTCACCTCAA+TGG 0.480113 5_2:-6101183 None:intergenic
ATCATTGCATTCAAAAGAAG+TGG 0.482215 5_2:+6100860 Msa0752450:CDS
ATCAATGGAGGTGGTGGTGG+TGG 0.484371 5_2:-6099878 None:intergenic
TGAACAACCAGCGGAGGAGG+AGG 0.489095 5_2:+6099492 Msa0752450:CDS
TCACTAGTACTATCACTAGA+TGG 0.489482 5_2:-6099847 None:intergenic
AAAGCAGCTGCCCAAGAAAT+GGG 0.490454 5_2:+6102519 Msa0752450:CDS
CAGCCTCAGCTTCTGCAAGC+AGG 0.491844 5_2:-6102563 None:intergenic
GCGGATCGACGACGAGGGTG+AGG 0.494709 5_2:-6099609 None:intergenic
AGAAGTGAAATTGTTTCAGC+AGG 0.495187 5_2:+6101454 Msa0752450:CDS
AACATCAATGGAGGTGGTGG+TGG 0.495643 5_2:-6099881 None:intergenic
CTGCTCGAAAGGATGCCATC+AGG 0.495792 5_2:+6100049 Msa0752450:CDS
ATATACTGACCGTTGCATAA+TGG 0.498069 5_2:-6100338 None:intergenic
TGGCCGTATCCATTCCCATC+TGG 0.499665 5_2:-6102347 None:intergenic
AGCACCTCAAATATTAAAAG+TGG 0.503960 5_2:-6102890 None:intergenic
TGAGGGAATGATCTTATTGA+AGG 0.505500 5_2:+6102431 Msa0752450:CDS
AATTGAACAACCAGCGGAGG+AGG 0.507192 5_2:+6099489 Msa0752450:CDS
ACTATCACTAGATGGTTGTT+GGG 0.511746 5_2:-6099839 None:intergenic
GGCCTTTCTTCTACTCCTGA+TGG 0.515837 5_2:-6100064 None:intergenic
TGTCATCTATACTGAAGTCC+GGG 0.516629 5_2:+6101387 Msa0752450:CDS
GATATGGATTCACTGTTTGA+AGG 0.517172 5_2:+6099439 Msa0752450:CDS
AGAAACGTTCCAGAAAATAA+GGG 0.517394 5_2:+6099972 Msa0752450:CDS
TTCATCATCAGAAGCCTTGG+AGG 0.517836 5_2:+6100893 Msa0752450:CDS
AAGAATGGGAGCAAAACTTA+GGG 0.522281 5_2:+6101295 Msa0752450:CDS
GGAGGAGCCGGCGAAGGAGA+AGG 0.524720 5_2:-6099781 None:intergenic
TGCCATCAGGAGTAGAAGAA+AGG 0.526891 5_2:+6100062 Msa0752450:CDS
TGTTGATGTTGATCTGGATG+TGG 0.531937 5_2:+6099750 Msa0752450:CDS
GTTGTTCAATTTGGGCAGCA+GGG 0.533020 5_2:-6099477 None:intergenic
TTCGAATCTTGAAAAGCTTG+AGG 0.533399 5_2:+6102371 Msa0752450:CDS
ACACCTTTCTGCCGCTGAGA+AGG 0.535473 5_2:+6100191 Msa0752450:CDS
AGCAACATCAATGGAGGTGG+TGG 0.537145 5_2:-6099884 None:intergenic
AAAACTTAGGGAATTTGCTA+GGG 0.538995 5_2:+6101307 Msa0752450:CDS
GGAATTTGCTAGGGTTTCTG+AGG 0.541022 5_2:+6101316 Msa0752450:CDS
TGTCCTTCTCAGCGGCAGAA+AGG 0.542611 5_2:-6100194 None:intergenic
AAACGATCTGGCTTGAGGAT+AGG 0.543009 5_2:+6099697 Msa0752450:CDS
CTCGTTCAGGAAGAAAGAAT+GGG 0.543231 5_2:+6101281 Msa0752450:CDS
AAGTCTCAGTTTATCCTCCC+CGG 0.543354 5_2:-6101405 None:intergenic
AGAGAATATCCAGATGGGAA+TGG 0.545530 5_2:+6102338 Msa0752450:CDS
ATTGAGATTGAAGAAGATCA+TGG 0.546555 5_2:-6099642 None:intergenic
ATATGGATTCACTGTTTGAA+GGG 0.547035 5_2:+6099440 Msa0752450:CDS
AACAGCAGGAGCAACATCAA+TGG 0.549336 5_2:-6099893 None:intergenic
TCGGGAATATGAGGAGGAGC+CGG 0.553209 5_2:-6099793 None:intergenic
TATCCAGATGGGAATGGATA+CGG 0.554363 5_2:+6102344 Msa0752450:CDS
TTCTTTCTTCCTGAACGAGA+AGG 0.555128 5_2:-6101277 None:intergenic
AGAGATTCAGTCAACCATTG+AGG 0.558406 5_2:+6101169 Msa0752450:CDS
CAGAGAAGGAGAAAACGATC+TGG 0.560854 5_2:+6099685 Msa0752450:CDS
GTTTCTGAGGAGGAAGCTAA+AGG 0.564591 5_2:+6101329 Msa0752450:CDS
TTGAGTTGGAATTGGAATTG+GGG 0.567028 5_2:+6099383 Msa0752450:five_prime_UTR
TCTCAGCGGCAGAAAGGTGT+TGG 0.569864 5_2:-6100188 None:intergenic
TGATAAATTGCAGGAGACTG+AGG 0.570191 5_2:+6102413 Msa0752450:CDS
AGAGAAGATATTCTCGTCAA+GGG 0.574979 5_2:-6099584 None:intergenic
ATTTGCTAGGGTTTCTGAGG+AGG 0.580411 5_2:+6101319 Msa0752450:CDS
ATTCAAAAGAAGTGGAACAA+TGG 0.580518 5_2:+6100868 Msa0752450:CDS
TGAGTTGGAATTGGAATTGG+GGG 0.580905 5_2:+6099384 Msa0752450:five_prime_UTR
AGCAGCTATGTGAGAGTCGA+GGG 0.583434 5_2:-6100289 None:intergenic
GCCGGCGAAGGAGAAGGAGA+AGG 0.583638 5_2:-6099775 None:intergenic
CAGAGAAGATATTCTCGTCA+AGG 0.589682 5_2:-6099585 None:intergenic
GGAGAAAACGATCTGGCTTG+AGG 0.590628 5_2:+6099692 Msa0752450:CDS
TGAGAAAGAGAATATCCAGA+TGG 0.592249 5_2:+6102332 Msa0752450:CDS
CGAATCTGAATGAACATGGA+AGG 0.596912 5_2:+6099409 Msa0752450:exon
GAGAGTTCCAGAACTTGAAG+CGG 0.597506 5_2:+6102233 Msa0752450:CDS
ATATGAGGAGGAGCCGGCGA+AGG 0.598171 5_2:-6099787 None:intergenic
CGACTCTCACATAGCTGCTG+AGG 0.598674 5_2:+6100293 Msa0752450:CDS
AGTTGAGCAGTTGACGAGCA+TGG 0.600096 5_2:-6100017 None:intergenic
TACTGACCGTTGCATAATGG+TGG 0.601422 5_2:-6100335 None:intergenic
GGATCGAATCTGAATGAACA+TGG 0.603041 5_2:+6099405 Msa0752450:exon
GAGAAAGAGAATATCCAGAT+GGG 0.606890 5_2:+6102333 Msa0752450:CDS
AGGAGCAACATCAATGGAGG+TGG 0.607030 5_2:-6099887 None:intergenic
GATAAATTGCAGGAGACTGA+GGG 0.609466 5_2:+6102414 Msa0752450:CDS
CTTCGCACCAACATCAGAGA+AGG 0.609487 5_2:+6099671 Msa0752450:CDS
AGCAAGATTAGAATTCTGAA+AGG 0.612744 5_2:-6100085 None:intergenic
AGTCTCCTGCAATTTATCAA+GGG 0.623518 5_2:-6102409 None:intergenic
TCTCCTGCTTGCAGAAGCTG+AGG 0.624719 5_2:+6102560 Msa0752450:CDS
GTAGCGCTAACACTAACAGC+AGG 0.633509 5_2:-6099907 None:intergenic
ACATAGCATCCTTCAAGCAG+AGG 0.634177 5_2:+6102193 Msa0752450:CDS
CAGCAGCTATGTGAGAGTCG+AGG 0.634230 5_2:-6100290 None:intergenic
AGTACAAGAATTAACCTGCA+AGG 0.635054 5_2:-6101498 None:intergenic
ATCTGAATGAACATGGAAGG+TGG 0.639736 5_2:+6099412 Msa0752450:exon
GTGTTGGCTAACCATTTCAG+CGG 0.645187 5_2:-6100172 None:intergenic
CAGATCAACATCAACATCAA+CGG 0.649855 5_2:-6099743 None:intergenic
GAAGGAGAAAGAGTTAGCAA+TGG 0.653490 5_2:+6102449 Msa0752450:CDS
TTGAAGCGGATCGACGACGA+GGG 0.659046 5_2:-6099614 None:intergenic
AGGGAATCGGGAATATGAGG+AGG 0.659914 5_2:-6099799 None:intergenic
TGAATGAACATGGAAGGTGG+CGG 0.662329 5_2:+6099415 Msa0752450:exon
TGCCCAAATTGAACAACCAG+CGG 0.662559 5_2:+6099483 Msa0752450:CDS
GAGAAGATATTCTCGTCAAG+GGG 0.662637 5_2:-6099583 None:intergenic
GGAGGAAGCTAAAGGATACA+GGG 0.664518 5_2:+6101337 Msa0752450:CDS
AGCAGGAGCAACATCAATGG+AGG 0.665368 5_2:-6099890 None:intergenic
GGCTGCCCGAATAGCTAGTG+AGG 0.669487 5_2:+6102293 Msa0752450:CDS
TTTGAAGCGGATCGACGACG+AGG 0.674654 5_2:-6099615 None:intergenic
CCAAATTGAACAACCAGCGG+AGG 0.674887 5_2:+6099486 Msa0752450:CDS
GATTTGTTTGTCCTTCTCAG+CGG 0.680058 5_2:-6100202 None:intergenic
GTCATCTATACTGAAGTCCG+GGG 0.682251 5_2:+6101388 Msa0752450:CDS
ATTACTCCACCATTATGCAA+CGG 0.686615 5_2:+6100329 Msa0752450:CDS
ATCAACATCAACATCAACGG+TGG 0.714775 5_2:-6099740 None:intergenic
GGGTAACAGTACTAACGACG+AGG 0.718979 5_2:-6099819 None:intergenic
GGTAACAGTACTAACGACGA+GGG 0.735047 5_2:-6099818 None:intergenic
ATCAACATACAATTTCAAGG+CGG 0.735712 5_2:+6102611 Msa0752450:CDS
TGCTGCAAGGAATTTCAAGG+AGG 0.736309 5_2:+6102272 Msa0752450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATAGTAATAAATAAAAAT+AGG - chr5_2:6101852-6101871 None:intergenic 10.0%
!! AGGAATTTATTTATATCATT+GGG - chr5_2:6100570-6100589 None:intergenic 15.0%
!! AAGGAATTTATTTATATCAT+TGG - chr5_2:6100571-6100590 None:intergenic 15.0%
!!! ACTAATATCATTTTTAAGTT+GGG - chr5_2:6102927-6102946 None:intergenic 15.0%
!!! TACTAATATCATTTTTAAGT+TGG - chr5_2:6102928-6102947 None:intergenic 15.0%
!!! AATCTTATTTAATTGCTCTA+TGG + chr5_2:6100663-6100682 Msa0752450:intron 20.0%
!!! ATCTTATTTAATTGCTCTAT+GGG + chr5_2:6100664-6100683 Msa0752450:intron 20.0%
!! TACAAAATTATACAAAAGGA+TGG - chr5_2:6100718-6100737 None:intergenic 20.0%
!! CAGATACAAAATTATACAAA+AGG - chr5_2:6100722-6100741 None:intergenic 20.0%
!! TATTGTTAAAAACGTCTTAA+TGG + chr5_2:6102018-6102037 Msa0752450:intron 20.0%
!!! TTTTATCAAGAATTGATACA+AGG - chr5_2:6102677-6102696 None:intergenic 20.0%
!! AATTCTTGATAAAAAGCAAT+TGG + chr5_2:6102683-6102702 Msa0752450:CDS 20.0%
!!! TTATCCAAACAAAATTTTAG+TGG + chr5_2:6102739-6102758 Msa0752450:three_prime_UTR 20.0%
!!! AAATCCACTAAAATTTTGTT+TGG - chr5_2:6102746-6102765 None:intergenic 20.0%
!! ATATATATTGTGTACGATAT+TGG + chr5_2:6102858-6102877 Msa0752450:three_prime_UTR 20.0%
!!! TTTACCACTTTTAATATTTG+AGG + chr5_2:6102886-6102905 Msa0752450:three_prime_UTR 20.0%
!!! TAATATCATTTTTAAGTTGG+GGG - chr5_2:6102925-6102944 None:intergenic 20.0%
!!! CTAATATCATTTTTAAGTTG+GGG - chr5_2:6102926-6102945 None:intergenic 20.0%
!!! TTTTAGTTCCTCTAAAAGAA+TGG + chr5_2:6100533-6100552 Msa0752450:intron 25.0%
!! TCTTATTTAATTGCTCTATG+GGG + chr5_2:6100665-6100684 Msa0752450:intron 25.0%
!! ATAATTTTGTATCTGTTTGC+TGG + chr5_2:6100727-6100746 Msa0752450:intron 25.0%
!!! TGTACTTATTTTTATGTGCT+TGG + chr5_2:6101515-6101534 Msa0752450:intron 25.0%
! GTCAATATCTCTAGATATAA+TGG + chr5_2:6101753-6101772 Msa0752450:intron 25.0%
! ATAAAACAATGACCAAAAAG+TGG + chr5_2:6101896-6101915 Msa0752450:intron 25.0%
!!! AATGTCATCACATTGTTTTT+AGG + chr5_2:6102137-6102156 Msa0752450:intron 25.0%
! CATAACATGTATCACAAAAT+TGG - chr5_2:6102823-6102842 None:intergenic 25.0%
!! AAACACTGTATTGATTGAGT+TGG + chr5_2:6099369-6099388 Msa0752450:five_prime_UTR 30.0%
!! TGTATTGATTGAGTTGGAAT+TGG + chr5_2:6099375-6099394 Msa0752450:five_prime_UTR 30.0%
!! ATTGAGTTGGAATTGGAATT+GGG + chr5_2:6099382-6099401 Msa0752450:five_prime_UTR 30.0%
ATATGGATTCACTGTTTGAA+GGG + chr5_2:6099440-6099459 Msa0752450:CDS 30.0%
ATTGAGATTGAAGAAGATCA+TGG - chr5_2:6099645-6099664 None:intergenic 30.0%
AAGAAACGTTCCAGAAAATA+AGG + chr5_2:6099971-6099990 Msa0752450:CDS 30.0%
AGAAACGTTCCAGAAAATAA+GGG + chr5_2:6099972-6099991 Msa0752450:CDS 30.0%
AGCAAGATTAGAATTCTGAA+AGG - chr5_2:6100088-6100107 None:intergenic 30.0%
TCTTGCTTCTCTTAAATACA+TGG + chr5_2:6100101-6100120 Msa0752450:CDS 30.0%
!! CAAATCTAAAGCATCGATAA+AGG - chr5_2:6100256-6100275 None:intergenic 30.0%
! TGACAAAGGCATATACTAAT+TGG - chr5_2:6100440-6100459 None:intergenic 30.0%
AGAGGAACTAAAATTACACT+TGG - chr5_2:6100526-6100545 None:intergenic 30.0%
AAGCAAAGCTAAAATGCATA+AGG - chr5_2:6100590-6100609 None:intergenic 30.0%
! TAGGCTCTTTATTTAAGTCA+TGG + chr5_2:6100760-6100779 Msa0752450:intron 30.0%
! ATTTACAGCATTCTAGAGAA+GGG - chr5_2:6100811-6100830 None:intergenic 30.0%
! TATTTACAGCATTCTAGAGA+AGG - chr5_2:6100812-6100831 None:intergenic 30.0%
ATCATTGCATTCAAAAGAAG+TGG + chr5_2:6100860-6100879 Msa0752450:CDS 30.0%
ATTCAAAAGAAGTGGAACAA+TGG + chr5_2:6100868-6100887 Msa0752450:CDS 30.0%
TAACATTGAGCTTTCAATAG+AGG + chr5_2:6100980-6100999 Msa0752450:CDS 30.0%
! TAAAAGAAAGAGTGTGCTAA+TGG + chr5_2:6101031-6101050 Msa0752450:CDS 30.0%
AAGATAAATAATGTCGTCTC+TGG + chr5_2:6101140-6101159 Msa0752450:CDS 30.0%
!! AAAACTTAGGGAATTTGCTA+GGG + chr5_2:6101307-6101326 Msa0752450:CDS 30.0%
AAGCTATGTTAGGTGAATAT+AGG + chr5_2:6101621-6101640 Msa0752450:intron 30.0%
! TTCCTCTGAAAGTAATAGTT+TGG + chr5_2:6101731-6101750 Msa0752450:intron 30.0%
AATAGAAGAAATGCAACCAT+GGG - chr5_2:6101829-6101848 None:intergenic 30.0%
ACACTTATTCATTTCCTCAA+TGG + chr5_2:6101930-6101949 Msa0752450:intron 30.0%
CACTTATTCATTTCCTCAAT+GGG + chr5_2:6101931-6101950 Msa0752450:intron 30.0%
TTGCATGGAAAAAAACAAAC+AGG - chr5_2:6102092-6102111 None:intergenic 30.0%
AAGCTTGAGGAAGAAATTAA+AGG + chr5_2:6102384-6102403 Msa0752450:CDS 30.0%
TCGATCAACATACAATTTCA+AGG + chr5_2:6102608-6102627 Msa0752450:CDS 30.0%
ATCAACATACAATTTCAAGG+CGG + chr5_2:6102611-6102630 Msa0752450:CDS 30.0%
CGGAAGACATTTCAAATTTA+CGG + chr5_2:6102631-6102650 Msa0752450:CDS 30.0%
! ACGGAAAGATTTGATTTCAA+TGG + chr5_2:6102650-6102669 Msa0752450:CDS 30.0%
! TGCTGCATTCAGTAATTTTT+AGG - chr5_2:6102793-6102812 None:intergenic 30.0%
AGCACCTCAAATATTAAAAG+TGG - chr5_2:6102893-6102912 None:intergenic 30.0%
!! GATTGAGTTGGAATTGGAAT+TGG + chr5_2:6099381-6099400 Msa0752450:five_prime_UTR 35.0%
!! TTGAGTTGGAATTGGAATTG+GGG + chr5_2:6099383-6099402 Msa0752450:five_prime_UTR 35.0%
GATATGGATTCACTGTTTGA+AGG + chr5_2:6099439-6099458 Msa0752450:CDS 35.0%
AGAGAAGATATTCTCGTCAA+GGG - chr5_2:6099587-6099606 None:intergenic 35.0%
CAGATCAACATCAACATCAA+CGG - chr5_2:6099746-6099765 None:intergenic 35.0%
ACTATCACTAGATGGTTGTT+GGG - chr5_2:6099842-6099861 None:intergenic 35.0%
TACTATCACTAGATGGTTGT+TGG - chr5_2:6099843-6099862 None:intergenic 35.0%
TCACTAGTACTATCACTAGA+TGG - chr5_2:6099850-6099869 None:intergenic 35.0%
! CTTCACAAGCTTGTTCTAAT+TGG - chr5_2:6100137-6100156 None:intergenic 35.0%
!!! AGATTTTGAAACCGCTGAAA+TGG + chr5_2:6100161-6100180 Msa0752450:CDS 35.0%
ATCAGCTTGTCTCAATGATT+CGG - chr5_2:6100232-6100251 None:intergenic 35.0%
ATTACTCCACCATTATGCAA+CGG + chr5_2:6100329-6100348 Msa0752450:CDS 35.0%
ATATACTGACCGTTGCATAA+TGG - chr5_2:6100341-6100360 None:intergenic 35.0%
! AATGCACTCCATTCTTTTAG+AGG - chr5_2:6100544-6100563 None:intergenic 35.0%
ATCAACAAGTCTTCCAGTAA+TGG - chr5_2:6100622-6100641 None:intergenic 35.0%
!! CAATGATGTTGCTTTCTTCA+TGG - chr5_2:6100847-6100866 None:intergenic 35.0%
AGCCTTGGAGGTTAAAAAAA+TGG + chr5_2:6100905-6100924 Msa0752450:CDS 35.0%
!!! CTCCATTTTTTTAACCTCCA+AGG - chr5_2:6100910-6100929 None:intergenic 35.0%
GGAGGTTAAAAAAATGGAGT+TGG + chr5_2:6100911-6100930 Msa0752450:CDS 35.0%
! GCACACTCTTTCTTTTACAA+AGG - chr5_2:6101028-6101047 None:intergenic 35.0%
! AATTGATAACCTTCTCGTTC+AGG + chr5_2:6101268-6101287 Msa0752450:CDS 35.0%
AAAGAATGGGAGCAAAACTT+AGG + chr5_2:6101294-6101313 Msa0752450:CDS 35.0%
AAGAATGGGAGCAAAACTTA+GGG + chr5_2:6101295-6101314 Msa0752450:CDS 35.0%
! CAAAACTTAGGGAATTTGCT+AGG + chr5_2:6101306-6101325 Msa0752450:CDS 35.0%
ATGTCATCTATACTGAAGTC+CGG + chr5_2:6101386-6101405 Msa0752450:CDS 35.0%
AACAATGAAGAAAAGCTCTC+TGG + chr5_2:6101431-6101450 Msa0752450:CDS 35.0%
AGAAGTGAAATTGTTTCAGC+AGG + chr5_2:6101454-6101473 Msa0752450:CDS 35.0%
AGTACAAGAATTAACCTGCA+AGG - chr5_2:6101501-6101520 None:intergenic 35.0%
CAAATTAAAGGTAGGAGCTA+GGG - chr5_2:6101584-6101603 None:intergenic 35.0%
TCAAATTAAAGGTAGGAGCT+AGG - chr5_2:6101585-6101604 None:intergenic 35.0%
TGTCACGTCAAATTAAAGGT+AGG - chr5_2:6101592-6101611 None:intergenic 35.0%
TGGATGTCACGTCAAATTAA+AGG - chr5_2:6101596-6101615 None:intergenic 35.0%
GACCAAACTATTACTTTCAG+AGG - chr5_2:6101736-6101755 None:intergenic 35.0%
!!! AGACAATTTTTTACCACCCA+TGG + chr5_2:6101810-6101829 Msa0752450:intron 35.0%
GAATAGAAGAAATGCAACCA+TGG - chr5_2:6101830-6101849 None:intergenic 35.0%
!! TTTGACATGTGTCCACTTTT+TGG - chr5_2:6101911-6101930 None:intergenic 35.0%
!! TCCTCAATGGGTTTTTACAT+AGG + chr5_2:6101943-6101962 Msa0752450:intron 35.0%
ACCTATGTAAAAACCCATTG+AGG - chr5_2:6101947-6101966 None:intergenic 35.0%
GAAAATAATCCTCTGCTTGA+AGG - chr5_2:6102205-6102224 None:intergenic 35.0%
!!! TTTTTTTCCGCTTCAAGTTC+TGG - chr5_2:6102243-6102262 None:intergenic 35.0%
ATTTAGCCTCACTAGCTATT+CGG - chr5_2:6102302-6102321 None:intergenic 35.0%
TGAGAAAGAGAATATCCAGA+TGG + chr5_2:6102332-6102351 Msa0752450:CDS 35.0%
GAGAAAGAGAATATCCAGAT+GGG + chr5_2:6102333-6102352 Msa0752450:CDS 35.0%
!! AAGCTTTTCAAGATTCGAAG+TGG - chr5_2:6102370-6102389 None:intergenic 35.0%
TTCGAATCTTGAAAAGCTTG+AGG + chr5_2:6102371-6102390 Msa0752450:CDS 35.0%
AGTCTCCTGCAATTTATCAA+GGG - chr5_2:6102412-6102431 None:intergenic 35.0%
TGAGGGAATGATCTTATTGA+AGG + chr5_2:6102431-6102450 Msa0752450:CDS 35.0%
! TGAGTTGGAATTGGAATTGG+GGG + chr5_2:6099384-6099403 Msa0752450:five_prime_UTR 40.0%
GGATCGAATCTGAATGAACA+TGG + chr5_2:6099405-6099424 Msa0752450:exon 40.0%
CGAATCTGAATGAACATGGA+AGG + chr5_2:6099409-6099428 Msa0752450:exon 40.0%
ATCTGAATGAACATGGAAGG+TGG + chr5_2:6099412-6099431 Msa0752450:exon 40.0%
GAGAAGATATTCTCGTCAAG+GGG - chr5_2:6099586-6099605 None:intergenic 40.0%
CAGAGAAGATATTCTCGTCA+AGG - chr5_2:6099588-6099607 None:intergenic 40.0%
!!! AGATCATGGTCGTTTTGAAG+CGG - chr5_2:6099631-6099650 None:intergenic 40.0%
! GTTTTCTCCTTCTCTGATGT+TGG - chr5_2:6099681-6099700 None:intergenic 40.0%
ATCAACATCAACATCAACGG+TGG - chr5_2:6099743-6099762 None:intergenic 40.0%
CGTTGATGTTGATGTTGATC+TGG + chr5_2:6099744-6099763 Msa0752450:CDS 40.0%
TGTTGATGTTGATCTGGATG+TGG + chr5_2:6099750-6099769 Msa0752450:CDS 40.0%
!!! GTATCGTCTCCCTTATTTTC+TGG - chr5_2:6099984-6100003 None:intergenic 40.0%
! GATTTGTTTGTCCTTCTCAG+CGG - chr5_2:6100205-6100224 None:intergenic 40.0%
ATGTATGTCTACTCTAGCCT+TGG + chr5_2:6100381-6100400 Msa0752450:intron 40.0%
! TGTATGTCTACTCTAGCCTT+GGG + chr5_2:6100382-6100401 Msa0752450:intron 40.0%
GCTTCTCATAATGCCATTAC+TGG + chr5_2:6100606-6100625 Msa0752450:intron 40.0%
!! GTTTGCTGGCTTATTTCTCT+AGG + chr5_2:6100741-6100760 Msa0752450:intron 40.0%
! GTTTTCATCATCAGAAGCCT+TGG + chr5_2:6100890-6100909 Msa0752450:CDS 40.0%
! GAGTGTGCTAATGGATGAAT+TGG + chr5_2:6101040-6101059 Msa0752450:CDS 40.0%
AGAGATTCAGTCAACCATTG+AGG + chr5_2:6101169-6101188 Msa0752450:CDS 40.0%
TCAACCATTGAGGTGAAGTA+TGG + chr5_2:6101179-6101198 Msa0752450:CDS 40.0%
TTTGCCATACTTCACCTCAA+TGG - chr5_2:6101186-6101205 None:intergenic 40.0%
CTTCTTCAGTGACAGAGTTT+CGG - chr5_2:6101243-6101262 None:intergenic 40.0%
TTCTTTCTTCCTGAACGAGA+AGG - chr5_2:6101280-6101299 None:intergenic 40.0%
TCTCGTTCAGGAAGAAAGAA+TGG + chr5_2:6101280-6101299 Msa0752450:CDS 40.0%
CTCGTTCAGGAAGAAAGAAT+GGG + chr5_2:6101281-6101300 Msa0752450:CDS 40.0%
TGTCATCTATACTGAAGTCC+GGG + chr5_2:6101387-6101406 Msa0752450:CDS 40.0%
ATCCAAGCTCAAGCTATGTT+AGG + chr5_2:6101611-6101630 Msa0752450:intron 40.0%
AAAACTCCCAACACAAGTCA+AGG + chr5_2:6101783-6101802 Msa0752450:intron 40.0%
!! CTCATTCCTTGACTTGTGTT+GGG - chr5_2:6101792-6101811 None:intergenic 40.0%
!! TCTCATTCCTTGACTTGTGT+TGG - chr5_2:6101793-6101812 None:intergenic 40.0%
!! CTAGAGTCTGTGTTTTTGCA+TGG - chr5_2:6102107-6102126 None:intergenic 40.0%
AAAAAGTTGCTACTGCTGCA+AGG + chr5_2:6102259-6102278 Msa0752450:CDS 40.0%
TACTGCTGCAAGGAATTTCA+AGG + chr5_2:6102269-6102288 Msa0752450:CDS 40.0%
TTTAGCCTCACTAGCTATTC+GGG - chr5_2:6102301-6102320 None:intergenic 40.0%
AGAGAATATCCAGATGGGAA+TGG + chr5_2:6102338-6102357 Msa0752450:CDS 40.0%
TATCCAGATGGGAATGGATA+CGG + chr5_2:6102344-6102363 Msa0752450:CDS 40.0%
CAGTCTCCTGCAATTTATCA+AGG - chr5_2:6102413-6102432 None:intergenic 40.0%
TGATAAATTGCAGGAGACTG+AGG + chr5_2:6102413-6102432 Msa0752450:CDS 40.0%
GATAAATTGCAGGAGACTGA+GGG + chr5_2:6102414-6102433 Msa0752450:CDS 40.0%
GAAGGAGAAAGAGTTAGCAA+TGG + chr5_2:6102449-6102468 Msa0752450:CDS 40.0%
TTCGACATCACCCATTTCTT+GGG - chr5_2:6102532-6102551 None:intergenic 40.0%
!! TTTTTAGGAGCACACACATC+TGG - chr5_2:6102778-6102797 None:intergenic 40.0%
TGAATGAACATGGAAGGTGG+CGG + chr5_2:6099415-6099434 Msa0752450:exon 45.0%
GGATTCACTGTTTGAAGGGA+TGG + chr5_2:6099444-6099463 Msa0752450:CDS 45.0%
GTTGTTCAATTTGGGCAGCA+GGG - chr5_2:6099480-6099499 None:intergenic 45.0%
TGCCCAAATTGAACAACCAG+CGG + chr5_2:6099483-6099502 Msa0752450:CDS 45.0%
! CTCCGCTGGTTGTTCAATTT+GGG - chr5_2:6099488-6099507 None:intergenic 45.0%
CAGAGAAGGAGAAAACGATC+TGG + chr5_2:6099685-6099704 Msa0752450:CDS 45.0%
! AAACGATCTGGCTTGAGGAT+AGG + chr5_2:6099697-6099716 Msa0752450:CDS 45.0%
! TCTGGCTTGAGGATAGGTTA+TGG + chr5_2:6099703-6099722 Msa0752450:CDS 45.0%
AGTACTAACGACGAGGGAAT+CGG - chr5_2:6099815-6099834 None:intergenic 45.0%
GGTAACAGTACTAACGACGA+GGG - chr5_2:6099821-6099840 None:intergenic 45.0%
AACAGCAGGAGCAACATCAA+TGG - chr5_2:6099896-6099915 None:intergenic 45.0%
TGCCATCAGGAGTAGAAGAA+AGG + chr5_2:6100062-6100081 Msa0752450:CDS 45.0%
!! GTGTTGGCTAACCATTTCAG+CGG - chr5_2:6100175-6100194 None:intergenic 45.0%
TACTGACCGTTGCATAATGG+TGG - chr5_2:6100338-6100357 None:intergenic 45.0%
TTCATCATCAGAAGCCTTGG+AGG + chr5_2:6100893-6100912 Msa0752450:CDS 45.0%
CGAAACTCTGTCACTGAAGA+AGG + chr5_2:6101241-6101260 Msa0752450:CDS 45.0%
!! GGAATTTGCTAGGGTTTCTG+AGG + chr5_2:6101316-6101335 Msa0752450:CDS 45.0%
! ATTTGCTAGGGTTTCTGAGG+AGG + chr5_2:6101319-6101338 Msa0752450:CDS 45.0%
! GTTTCTGAGGAGGAAGCTAA+AGG + chr5_2:6101329-6101348 Msa0752450:CDS 45.0%
AGGAGGAAGCTAAAGGATAC+AGG + chr5_2:6101336-6101355 Msa0752450:CDS 45.0%
GGAGGAAGCTAAAGGATACA+GGG + chr5_2:6101337-6101356 Msa0752450:CDS 45.0%
GTCATCTATACTGAAGTCCG+GGG + chr5_2:6101388-6101407 Msa0752450:CDS 45.0%
AAGTCTCAGTTTATCCTCCC+CGG - chr5_2:6101408-6101427 None:intergenic 45.0%
ATTAACCTGCAAGGAAGCTC+TGG - chr5_2:6101492-6101511 None:intergenic 45.0%
CACCTAACATAGCTTGAGCT+TGG - chr5_2:6101616-6101635 None:intergenic 45.0%
AGAAGAAATGCAACCATGGG+TGG - chr5_2:6101826-6101845 None:intergenic 45.0%
TGAAGGATGCTATGTCTTGC+TGG - chr5_2:6102188-6102207 None:intergenic 45.0%
ACATAGCATCCTTCAAGCAG+AGG + chr5_2:6102193-6102212 Msa0752450:CDS 45.0%
GAGAGTTCCAGAACTTGAAG+CGG + chr5_2:6102233-6102252 Msa0752450:CDS 45.0%
TGCTGCAAGGAATTTCAAGG+AGG + chr5_2:6102272-6102291 Msa0752450:CDS 45.0%
AGGCACCCTTGATAAATTGC+AGG + chr5_2:6102404-6102423 Msa0752450:CDS 45.0%
AAAAGCAGCTGCCCAAGAAA+TGG + chr5_2:6102518-6102537 Msa0752450:CDS 45.0%
AAAGCAGCTGCCCAAGAAAT+GGG + chr5_2:6102519-6102538 Msa0752450:CDS 45.0%
CTTCGACATCACCCATTTCT+TGG - chr5_2:6102533-6102552 None:intergenic 45.0%
!!! TTAATTATTTGTTTTATTAT+AGG - chr5_2:6099331-6099350 None:intergenic 5.0%
GGTTGTTCAATTTGGGCAGC+AGG - chr5_2:6099481-6099500 None:intergenic 50.0%
! CCTCCGCTGGTTGTTCAATT+TGG - chr5_2:6099489-6099508 None:intergenic 50.0%
CCAAATTGAACAACCAGCGG+AGG + chr5_2:6099486-6099505 Msa0752450:CDS 50.0%
AATTGAACAACCAGCGGAGG+AGG + chr5_2:6099489-6099508 Msa0752450:CDS 50.0%
CTTCGCACCAACATCAGAGA+AGG + chr5_2:6099671-6099690 Msa0752450:CDS 50.0%
! GGAGAAAACGATCTGGCTTG+AGG + chr5_2:6099692-6099711 Msa0752450:CDS 50.0%
AGGGAATCGGGAATATGAGG+AGG - chr5_2:6099802-6099821 None:intergenic 50.0%
ACGAGGGAATCGGGAATATG+AGG - chr5_2:6099805-6099824 None:intergenic 50.0%
GTACTAACGACGAGGGAATC+GGG - chr5_2:6099814-6099833 None:intergenic 50.0%
GGGTAACAGTACTAACGACG+AGG - chr5_2:6099822-6099841 None:intergenic 50.0%
! AACATCAATGGAGGTGGTGG+TGG - chr5_2:6099884-6099903 None:intergenic 50.0%
AGCAACATCAATGGAGGTGG+TGG - chr5_2:6099887-6099906 None:intergenic 50.0%
AGGAGCAACATCAATGGAGG+TGG - chr5_2:6099890-6099909 None:intergenic 50.0%
AGCAGGAGCAACATCAATGG+AGG - chr5_2:6099893-6099912 None:intergenic 50.0%
GTAGCGCTAACACTAACAGC+AGG - chr5_2:6099910-6099929 None:intergenic 50.0%
AGTTGAGCAGTTGACGAGCA+TGG - chr5_2:6100020-6100039 None:intergenic 50.0%
CTCTGCATCTTCTGCTCGAA+AGG + chr5_2:6100038-6100057 Msa0752450:CDS 50.0%
GGCCTTTCTTCTACTCCTGA+TGG - chr5_2:6100067-6100086 None:intergenic 50.0%
AGCAGCTATGTGAGAGTCGA+GGG - chr5_2:6100292-6100311 None:intergenic 50.0%
!! TACTCTAGCCTTGGGTGTGA+GGG + chr5_2:6100390-6100409 Msa0752450:intron 50.0%
GTGACACTTGGGGATGACAA+AGG - chr5_2:6100454-6100473 None:intergenic 50.0%
GTGTTGCACTGTGACACTTG+GGG - chr5_2:6100464-6100483 None:intergenic 50.0%
CGTGTTGCACTGTGACACTT+GGG - chr5_2:6100465-6100484 None:intergenic 50.0%
CCAAGTGTCACAGTGCAACA+CGG + chr5_2:6100463-6100482 Msa0752450:intron 50.0%
ATCTATACTGAAGTCCGGGG+AGG + chr5_2:6101391-6101410 Msa0752450:CDS 50.0%
TCCAGACCTGTGCTTAAGCA+CGG + chr5_2:6101978-6101997 Msa0752450:intron 50.0%
!! CATGGAAGGTGGCGGAGATA+TGG + chr5_2:6099423-6099442 Msa0752450:CDS 55.0%
TTGAAGCGGATCGACGACGA+GGG - chr5_2:6099617-6099636 None:intergenic 55.0%
! TTTGAAGCGGATCGACGACG+AGG - chr5_2:6099618-6099637 None:intergenic 55.0%
TCCTTCTCCTTCTCCTTCGC+CGG + chr5_2:6099774-6099793 Msa0752450:CDS 55.0%
TCGGGAATATGAGGAGGAGC+CGG - chr5_2:6099796-6099815 None:intergenic 55.0%
!! ATCAATGGAGGTGGTGGTGG+TGG - chr5_2:6099881-6099900 None:intergenic 55.0%
CTGCTCGAAAGGATGCCATC+AGG + chr5_2:6100049-6100068 Msa0752450:CDS 55.0%
! TCTCAGCGGCAGAAAGGTGT+TGG - chr5_2:6100191-6100210 None:intergenic 55.0%
ACACCTTTCTGCCGCTGAGA+AGG + chr5_2:6100191-6100210 Msa0752450:CDS 55.0%
TGTCCTTCTCAGCGGCAGAA+AGG - chr5_2:6100197-6100216 None:intergenic 55.0%
CAGCAGCTATGTGAGAGTCG+AGG - chr5_2:6100293-6100312 None:intergenic 55.0%
CGACTCTCACATAGCTGCTG+AGG + chr5_2:6100293-6100312 Msa0752450:CDS 55.0%
!! CTACTCTAGCCTTGGGTGTG+AGG + chr5_2:6100389-6100408 Msa0752450:intron 55.0%
AGTAGACACCCTCACACCCA+AGG - chr5_2:6100401-6100420 None:intergenic 55.0%
!! GGTGTGAGGGTGTCTACTCT+AGG + chr5_2:6100403-6100422 Msa0752450:intron 55.0%
CCGTGTTGCACTGTGACACT+TGG - chr5_2:6100466-6100485 None:intergenic 55.0%
GTGTCACAGTGCAACACGGT+AGG + chr5_2:6100467-6100486 Msa0752450:intron 55.0%
CCAGACCTGTGCTTAAGCAC+GGG + chr5_2:6101979-6101998 Msa0752450:intron 55.0%
GTTCACCCGTGCTTAAGCAC+AGG - chr5_2:6101987-6102006 None:intergenic 55.0%
TGGCCGTATCCATTCCCATC+TGG - chr5_2:6102350-6102369 None:intergenic 55.0%
TCTCCTGCTTGCAGAAGCTG+AGG + chr5_2:6102560-6102579 Msa0752450:CDS 55.0%
TGAACAACCAGCGGAGGAGG+AGG + chr5_2:6099492-6099511 Msa0752450:CDS 60.0%
TTCTTCTCCTCCTCCTCCGC+TGG - chr5_2:6099502-6099521 None:intergenic 60.0%
GAAGCTGATGCAGCTGCTGC+AGG - chr5_2:6099553-6099572 None:intergenic 60.0%
ATATGAGGAGGAGCCGGCGA+AGG - chr5_2:6099790-6099809 None:intergenic 60.0%
TGCTGCCAGAGCTTCCTTGC+AGG + chr5_2:6101484-6101503 Msa0752450:CDS 60.0%
CCCGTGCTTAAGCACAGGTC+TGG - chr5_2:6101982-6102001 None:intergenic 60.0%
GGCTGCCCGAATAGCTAGTG+AGG + chr5_2:6102293-6102312 Msa0752450:CDS 60.0%
CAGCCTCAGCTTCTGCAAGC+AGG - chr5_2:6102566-6102585 None:intergenic 60.0%
GCCGGCGAAGGAGAAGGAGA+AGG - chr5_2:6099778-6099797 None:intergenic 65.0%
GCGGATCGACGACGAGGGTG+AGG - chr5_2:6099612-6099631 None:intergenic 70.0%
GGAGGAGCCGGCGAAGGAGA+AGG - chr5_2:6099784-6099803 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 6099310 6102956 6099310 ID=Msa0752450;Name=Msa0752450
chr5_2 mRNA 6099310 6102956 6099310 ID=Msa0752450-mRNA-1;Parent=Msa0752450;Name=Msa0752450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=108|1|1|1|1|1|3|222|731
chr5_2 exon 6099310 6100350 6099310 ID=Msa0752450-mRNA-1:exon:2559;Parent=Msa0752450-mRNA-1
chr5_2 exon 6100819 6101505 6100819 ID=Msa0752450-mRNA-1:exon:2560;Parent=Msa0752450-mRNA-1
chr5_2 exon 6102159 6102956 6102159 ID=Msa0752450-mRNA-1:exon:2561;Parent=Msa0752450-mRNA-1
chr5_2 five_prime_UTR 6099310 6099417 6099310 ID=Msa0752450-mRNA-1:five_prime_utr;Parent=Msa0752450-mRNA-1
chr5_2 CDS 6099418 6100350 6099418 ID=Msa0752450-mRNA-1:cds;Parent=Msa0752450-mRNA-1
chr5_2 CDS 6100819 6101505 6100819 ID=Msa0752450-mRNA-1:cds;Parent=Msa0752450-mRNA-1
chr5_2 CDS 6102159 6102734 6102159 ID=Msa0752450-mRNA-1:cds;Parent=Msa0752450-mRNA-1
chr5_2 three_prime_UTR 6102735 6102956 6102735 ID=Msa0752450-mRNA-1:three_prime_utr;Parent=Msa0752450-mRNA-1
Gene Sequence

>Msa0752450

ATGAACATGGAAGGTGGCGGAGATATGGATTCACTGTTTGAAGGGATGGTTTTGTTCAACCCTGCTGCCCAAATTGAACAACCAGCGGAGGAGGAGGAGAAGAATCAACAACTCAATCAAAGTGATGCTTCTCCTGCAGCAGCTGCATCAGCTTCGTGTACTCAGCCCCTTGACGAGAATATCTTCTCTGACCTCACCCTCGTCGTCGATCCGCTTCAAAACGACCATGATCTTCTTCAATCTCAATCTTCTTCTTCGCACCAACATCAGAGAAGGAGAAAACGATCTGGCTTGAGGATAGGTTATGGAAGAGATAGAGACACCACCGTTGATGTTGATGTTGATCTGGATGTGGATCCTTCTCCTTCTCCTTCGCCGGCTCCTCCTCATATTCCCGATTCCCTCGTCGTTAGTACTGTTACCCAACAACCATCTAGTGATAGTACTAGTGAGTCAATCACCACCACCACCACCTCCATTGATGTTGCTCCTGCTGTTAGTGTTAGCGCTACTGAATTGAAAAATGAAAGCAGAGACGCAGCAAACGATGAAGAAGAAACGTTCCAGAAAATAAGGGAGACGATACATGAGAAGCTTAGCCATGCTCGTCAACTGCTCAACTCTGCATCTTCTGCTCGAAAGGATGCCATCAGGAGTAGAAGAAAGGCCTTTCAGAATTCTAATCTTGCTTCTCTTAAATACATGGAACTTGAGAACCAATTAGAACAAGCTTGTGAAGCTGAAGATTTTGAAACCGCTGAAATGGTTAGCCAACACCTTTCTGCCGCTGAGAAGGACAAACAAATCTGCGCCGAATCATTGAGACAAGCTGATGCCTTTATCGATGCTTTAGATTTGAAATTGCAGCATGCCCTCGACTCTCACATAGCTGCTGAGGAAGAATCTGCAACATTACTCCACCATTATGCAACGAATGCTGTAAATAATGCAGACTCTGCCATGAAGAAAGCAACATCATTGCATTCAAAAGAAGTGGAACAATGGTTTTCATCATCAGAAGCCTTGGAGGTTAAAAAAATGGAGTTGGAGATTGAATCACATTTTATAAGTGAAGCTCATACAGAACTTAATAATAACATTGAGCTTTCAATAGAGGATGACAAAAAAGAAAAAGAGATCCTTTGTAAAAGAAAGAGTGTGCTAATGGATGAATTGGAAAAACTTCTTGCTTTAGTCAAACAGAAAGAAAAAGAGATAGCTGACAATGATTCTGATTTAAAAGCTGTAGAGCATAAGATAAATAATGTCGTCTCTGGATTTAAAGAGATTCAGTCAACCATTGAGGTGAAGTATGGCAAATTGCAATCTGTTCTTGCTCAAGTGAAATTAGAGACCGAAACTCTGTCACTGAAGAAGGACAAAATTGATAACCTTCTCGTTCAGGAAGAAAGAATGGGAGCAAAACTTAGGGAATTTGCTAGGGTTTCTGAGGAGGAAGCTAAAGGATACAGGGAAATAATCAAATTAAGAAGAAGTTTGATGTCATCTATACTGAAGTCCGGGGAGGATAAACTGAGACTTACAAACAATGAAGAAAAGCTCTCTGGAGAAGTGAAATTGTTTCAGCAGGAAGTTTCTGCTGCCAGAGCTTCCTTGCAGGAACTATCTTCAAGAAAGTCGAGCATCCAGCAAGACATAGCATCCTTCAAGCAGAGGATTATTTTCATAGATAAGAGAGTTCCAGAACTTGAAGCGGAAAAAAAAGTTGCTACTGCTGCAAGGAATTTCAAGGAGGCTGCCCGAATAGCTAGTGAGGCTAAATCACTGTGTGTTGAGAAAGAGAATATCCAGATGGGAATGGATACGGCCACTTCGAATCTTGAAAAGCTTGAGGAAGAAATTAAAGGCACCCTTGATAAATTGCAGGAGACTGAGGGAATGATCTTATTGAAGGAGAAAGAGTTAGCAATGGCTAGATATCAAAAGCTACTTTTGACAGCTGCTACTGCTAGAGCTGAAAAAGCAGCTGCCCAAGAAATGGGTGATGTCGAAGAAGCTAATCTCCTGCTTGCAGAAGCTGAGGCTGCAGACTGTGAAGCTGAGAGAATTCGATCAACATACAATTTCAAGGCGGAAGACATTTCAAATTTACGGAAAGATTTGATTTCAATGGACCTTGTATCAATTCTTGATAAAAAGCAATTGGAAAAATTAGTTGTCACTTCATCTATTTAG

Protein sequence

>Msa0752450

MNMEGGGDMDSLFEGMVLFNPAAQIEQPAEEEEKNQQLNQSDASPAAAASASCTQPLDENIFSDLTLVVDPLQNDHDLLQSQSSSSHQHQRRRKRSGLRIGYGRDRDTTVDVDVDLDVDPSPSPSPAPPHIPDSLVVSTVTQQPSSDSTSESITTTTTSIDVAPAVSVSATELKNESRDAANDEEETFQKIRETIHEKLSHARQLLNSASSARKDAIRSRRKAFQNSNLASLKYMELENQLEQACEAEDFETAEMVSQHLSAAEKDKQICAESLRQADAFIDALDLKLQHALDSHIAAEEESATLLHHYATNAVNNADSAMKKATSLHSKEVEQWFSSSEALEVKKMELEIESHFISEAHTELNNNIELSIEDDKKEKEILCKRKSVLMDELEKLLALVKQKEKEIADNDSDLKAVEHKINNVVSGFKEIQSTIEVKYGKLQSVLAQVKLETETLSLKKDKIDNLLVQEERMGAKLREFARVSEEEAKGYREIIKLRRSLMSSILKSGEDKLRLTNNEEKLSGEVKLFQQEVSAARASLQELSSRKSSIQQDIASFKQRIIFIDKRVPELEAEKKVATAARNFKEAARIASEAKSLCVEKENIQMGMDTATSNLEKLEEEIKGTLDKLQETEGMILLKEKELAMARYQKLLLTAATARAEKAAAQEMGDVEEANLLLAEAEAADCEAERIRSTYNFKAEDISNLRKDLISMDLVSILDKKQLEKLVVTSSI*