AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0017340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017340 MtrunA17_Chr1g0169301 92.937 269 19 0 14 282 11 279 7.91e-175 483
Msa0017340 MtrunA17_Chr1g0169501 92.937 269 19 0 14 282 14 282 3.66e-170 472
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017340 AT3G24030.1 64.029 278 97 1 6 283 2 276 1.65e-129 369

Find 90 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCTCATAGTTGTTAATTT+TGG 0.182997 1_1:+28743660 Msa0017340:three_prime_UTR
GTATCGGCATTATCTGTATT+TGG 0.228241 1_1:+28743445 Msa0017340:CDS
TATGCATCAAAGACATTATA+AGG 0.291379 1_1:-28743888 None:intergenic
GGCCCCTGACACTGCAACTA+TGG 0.293340 1_1:-28743275 None:intergenic
AGGAATTAACTTTCAAAATA+CGG 0.339244 1_1:-28743868 None:intergenic
GATGCTTGCGTTCAACTTGT+TGG 0.348228 1_1:+28742425 Msa0017340:CDS
GCTCCGAGTTGGATATTCCT+TGG 0.355462 1_1:+28742360 Msa0017340:CDS
TTATCTGTATTTGGCGTTGC+AGG 0.365914 1_1:+28743454 Msa0017340:CDS
CTCCGAGTTGGATATTCCTT+GGG 0.366508 1_1:+28742361 Msa0017340:CDS
AGTGCTCTCTGTCTCAATAT+TGG 0.367204 1_1:+28742287 Msa0017340:CDS
TCCATCACCTTGCTGTTTGA+TGG 0.377920 1_1:+28742055 Msa0017340:exon
AAGTTGTTGGCGCTCACAAT+GGG 0.388734 1_1:+28743323 Msa0017340:CDS
CTGACGCGTGGCGTGAAATC+TGG 0.390332 1_1:-28742266 None:intergenic
AATCACTAGCTAGTAATAAC+AGG 0.399453 1_1:+28743743 Msa0017340:three_prime_UTR
GAAGAAACAGAAACAGCAAC+AGG 0.406504 1_1:-28742392 None:intergenic
TTCTGCTTTAAAATATCTTA+CGG 0.406769 1_1:+28743769 Msa0017340:three_prime_UTR
TCATGTTAATATCACTAGCT+TGG 0.414517 1_1:+28743570 Msa0017340:CDS
GTTGACCAACATAAGTTAGA+AGG 0.416466 1_1:-28743840 None:intergenic
TGTCTCAACCTCAACAGTTC+AGG 0.419378 1_1:-28743935 None:intergenic
CAAGAAAGAGGAGTTGGAAT+GGG 0.419387 1_1:+28742094 Msa0017340:CDS
TACGAGTGAGTGAGAATTTG+TGG 0.433841 1_1:+28741985 Msa0017340:five_prime_UTR
ATTTGGCGTTGCAGGTGAGC+TGG 0.439209 1_1:+28743462 Msa0017340:CDS
GTGCCATAGTTGCAGTGTCA+GGG 0.447118 1_1:+28743272 Msa0017340:CDS
GAAGAACAAGAAAGAGGAGT+TGG 0.447750 1_1:+28742088 Msa0017340:CDS
TTTGGCCTTCTAACTTATGT+TGG 0.448038 1_1:+28743835 Msa0017340:three_prime_UTR
CATACACTTTATCTATCAAC+TGG 0.448243 1_1:+28742031 Msa0017340:five_prime_UTR
CATGTTAATATCACTAGCTT+GGG 0.449830 1_1:+28743571 Msa0017340:CDS
AGTTGAAGCAGCAAAGTTGT+TGG 0.463508 1_1:+28743237 Msa0017340:CDS
TTATAATGTCTTTGATGCAT+AGG 0.463788 1_1:+28743890 Msa0017340:three_prime_UTR
GGTGCCATAGTTGCAGTGTC+AGG 0.470007 1_1:+28743271 Msa0017340:CDS
GGAATTAACTTTCAAAATAC+GGG 0.470903 1_1:-28743867 None:intergenic
CAACAAGAAGAACAAGAAAG+AGG 0.471811 1_1:+28742082 Msa0017340:CDS
AGACGAAAATCTTTGTTTCA+AGG 0.479511 1_1:+28742008 Msa0017340:five_prime_UTR
ACAGATGGAAATCAAGTTGT+TGG 0.490018 1_1:+28743310 Msa0017340:CDS
ACAAGAAAGAGGAGTTGGAA+TGG 0.492353 1_1:+28742093 Msa0017340:CDS
AAGTGCATCCGCAACGATGC+AGG 0.499737 1_1:-28743505 None:intergenic
AGAGGATTGAAGTGAGGAAG+AGG 0.500352 1_1:-28742498 None:intergenic
TGGTATCCACTAGTTCAAGA+TGG 0.506210 1_1:+28743680 Msa0017340:three_prime_UTR
TTTAAACCAACTGTTATTCG+AGG 0.506926 1_1:+28742449 Msa0017340:CDS
TTAGCAGCAGCTATCATAGC+AGG 0.512741 1_1:-28742332 None:intergenic
CGCATGTAGCTCTTGTAAGT+TGG 0.515460 1_1:+28743609 Msa0017340:three_prime_UTR
CAAGTTGTTGGCGCTCACAA+TGG 0.516162 1_1:+28743322 Msa0017340:CDS
TCCATCAAACAGCAAGGTGA+TGG 0.520129 1_1:-28742056 None:intergenic
GATATTAACATGAGATTGCA+AGG 0.522930 1_1:-28743560 None:intergenic
TGAATTTAGAGTTACCTTTG+AGG 0.524977 1_1:-28742525 None:intergenic
AGTTACCTTTGAGGCAGCAG+AGG 0.525913 1_1:-28742516 None:intergenic
TTGCCCTTCGCTAGAGAGAA+TGG 0.525930 1_1:+28743803 Msa0017340:three_prime_UTR
TCAATCCTCTGCTGCCTCAA+AGG 0.526743 1_1:+28742511 Msa0017340:CDS
TGCTTTAGATGCAACAGTAT+CGG 0.531109 1_1:+28743429 Msa0017340:CDS
GCGAATACTCTCTTATCAGC+TGG 0.534332 1_1:+28742206 Msa0017340:CDS
AAGAAAGAGGAGTTGGAATG+GGG 0.535609 1_1:+28742095 Msa0017340:CDS
ACTACTTTCAAAGCTTCGAA+TGG 0.536228 1_1:+28742133 Msa0017340:CDS
TGCCATAGTTGCAGTGTCAG+GGG 0.541576 1_1:+28743273 Msa0017340:CDS
AGAGTTAATTATATATATGC+GGG 0.546533 1_1:+28743982 Msa0017340:three_prime_UTR
AGCTGGTGCTTCACCTGCGA+TGG 0.547729 1_1:+28742223 Msa0017340:CDS
GCATTTCCTCGAATAACAGT+TGG 0.555043 1_1:-28742455 None:intergenic
TAAGATCCATCTTGAACTAG+TGG 0.555340 1_1:-28743686 None:intergenic
GCCACTGACATCGTCACAGA+TGG 0.557972 1_1:+28743295 Msa0017340:CDS
TTTGGCGTTGCAGGTGAGCT+GGG 0.561557 1_1:+28743463 Msa0017340:CDS
GGACAGTACTCATGGTTCAA+TGG 0.563399 1_1:+28743210 Msa0017340:CDS
CTGGGAATGAAGATGGCTAA+AGG 0.564269 1_1:+28743481 Msa0017340:CDS
GTTGAACGCAAGCATCGAAA+CGG 0.570280 1_1:-28742418 None:intergenic
TGCTAAGCTCTGCTCCGAGT+TGG 0.580906 1_1:+28742349 Msa0017340:CDS
TATACCATTCTCTCTAGCGA+AGG 0.583561 1_1:-28743807 None:intergenic
CACTTGATAGATGCACTCTA+CGG 0.587227 1_1:+28743523 Msa0017340:CDS
TCGAGAGAATGAACCATCGC+AGG 0.593578 1_1:-28742236 None:intergenic
TTGAGACATTGCTTATCATG+TGG 0.594083 1_1:+28743950 Msa0017340:three_prime_UTR
ATACTGTTGCATCTAAAGCA+TGG 0.601488 1_1:-28743426 None:intergenic
TAGAGTTAATTATATATATG+CGG 0.603672 1_1:+28743981 Msa0017340:three_prime_UTR
AAGTTGTTCCTGAACTGTTG+AGG 0.609174 1_1:+28743927 Msa0017340:three_prime_UTR
TTAGTCATGCATTGAATCAG+CGG 0.616614 1_1:-28742161 None:intergenic
AGGTGAGCTGGGAATGAAGA+TGG 0.617766 1_1:+28743474 Msa0017340:CDS
GGAAAGAGCGATGATTTCAG+AGG 0.624725 1_1:-28742477 None:intergenic
GGCAGCAGAGGATTGAAGTG+AGG 0.626391 1_1:-28742504 None:intergenic
TGTTGGCGCTCACAATGGGG+TGG 0.629084 1_1:+28743327 Msa0017340:CDS
AAGGGTGTGGACAGTACTCA+TGG 0.630431 1_1:+28743202 Msa0017340:intron
CTAAAGGTCCTGCATCGTTG+CGG 0.631154 1_1:+28743497 Msa0017340:CDS
AAGATGGATCTTAGTGACAG+TGG 0.633001 1_1:+28743696 Msa0017340:three_prime_UTR
TTGTCTTCCATCAAACAGCA+AGG 0.636799 1_1:-28742062 None:intergenic
GCAACAGGGTCAAGAACCCA+AGG 0.637039 1_1:-28742377 None:intergenic
ATACCATTCTCTCTAGCGAA+GGG 0.640060 1_1:-28743806 None:intergenic
TGGAATGGGGAAGAAAGACA+TGG 0.640624 1_1:+28742108 Msa0017340:CDS
AAGTTGTTGGCTCAAACAAG+TGG 0.641654 1_1:+28743250 Msa0017340:CDS
TCCATCTGTGACGATGTCAG+TGG 0.654210 1_1:-28743296 None:intergenic
AACCCAAGGAATATCCAACT+CGG 0.659664 1_1:-28742363 None:intergenic
AAGAAACAGAAACAGCAACA+GGG 0.676290 1_1:-28742391 None:intergenic
AGACAGAGAGCACTGACGCG+TGG 0.684691 1_1:-28742278 None:intergenic
AACAAAGGCAGCAATAAGAG+CGG 0.707285 1_1:-28743389 None:intergenic
CAACTTACAAGAGCTACATG+CGG 0.714880 1_1:-28743608 None:intergenic
AGTTGTTGGCGCTCACAATG+GGG 0.718385 1_1:+28743324 Msa0017340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTCCTATAATCTAATT+TGG - chr1_1:28742954-28742973 None:intergenic 15.0%
!! TAGAGTTAATTATATATATG+CGG + chr1_1:28743981-28744000 Msa0017340:three_prime_UTR 15.0%
!!! TTTTTTCCTATAATCTAATT+TGG - chr1_1:28742954-28742973 None:intergenic 15.0%
!! TAGAGTTAATTATATATATG+CGG + chr1_1:28743981-28744000 Msa0017340:three_prime_UTR 15.0%
!!! TTTTGTATCAATGGATTTAA+TGG + chr1_1:28742184-28742203 Msa0017340:CDS 20.0%
!! ATACAGGAAGAAAAAAAAAA+AGG + chr1_1:28742712-28742731 Msa0017340:intron 20.0%
!!! ATCAATGTTAGCTTAAATTT+TGG + chr1_1:28742762-28742781 Msa0017340:intron 20.0%
!!! TCAATGTTAGCTTAAATTTT+GGG + chr1_1:28742763-28742782 Msa0017340:intron 20.0%
!! ATGTAGATTATGTAGTAAAA+AGG + chr1_1:28742883-28742902 Msa0017340:intron 20.0%
!! TGTAGATTATGTAGTAAAAA+GGG + chr1_1:28742884-28742903 Msa0017340:intron 20.0%
!! AACTATTCAGAAAAATTTAG+AGG + chr1_1:28742972-28742991 Msa0017340:intron 20.0%
!! AAAAAATAGATTTCACTTAC+AGG + chr1_1:28743081-28743100 Msa0017340:intron 20.0%
!! AAAAATAGATTTCACTTACA+GGG + chr1_1:28743082-28743101 Msa0017340:intron 20.0%
!!! ACAGAGTTTTTGTTTAATTT+TGG - chr1_1:28743114-28743133 None:intergenic 20.0%
!! ATTATTGACAAAAATTCTAG+AGG - chr1_1:28743726-28743745 None:intergenic 20.0%
!!! TTCTGCTTTAAAATATCTTA+CGG + chr1_1:28743769-28743788 Msa0017340:three_prime_UTR 20.0%
!! AGGAATTAACTTTCAAAATA+CGG - chr1_1:28743871-28743890 None:intergenic 20.0%
!! AGAGTTAATTATATATATGC+GGG + chr1_1:28743982-28744001 Msa0017340:three_prime_UTR 20.0%
!!! TTTTGTATCAATGGATTTAA+TGG + chr1_1:28742184-28742203 Msa0017340:CDS 20.0%
!! ATACAGGAAGAAAAAAAAAA+AGG + chr1_1:28742712-28742731 Msa0017340:intron 20.0%
!!! ATCAATGTTAGCTTAAATTT+TGG + chr1_1:28742762-28742781 Msa0017340:intron 20.0%
!!! TCAATGTTAGCTTAAATTTT+GGG + chr1_1:28742763-28742782 Msa0017340:intron 20.0%
!! ATGTAGATTATGTAGTAAAA+AGG + chr1_1:28742883-28742902 Msa0017340:intron 20.0%
!! TGTAGATTATGTAGTAAAAA+GGG + chr1_1:28742884-28742903 Msa0017340:intron 20.0%
!! AACTATTCAGAAAAATTTAG+AGG + chr1_1:28742972-28742991 Msa0017340:intron 20.0%
!! AAAAAATAGATTTCACTTAC+AGG + chr1_1:28743081-28743100 Msa0017340:intron 20.0%
!! AAAAATAGATTTCACTTACA+GGG + chr1_1:28743082-28743101 Msa0017340:intron 20.0%
!!! ACAGAGTTTTTGTTTAATTT+TGG - chr1_1:28743114-28743133 None:intergenic 20.0%
!! ATTATTGACAAAAATTCTAG+AGG - chr1_1:28743726-28743745 None:intergenic 20.0%
!!! TTCTGCTTTAAAATATCTTA+CGG + chr1_1:28743769-28743788 Msa0017340:three_prime_UTR 20.0%
!! AGGAATTAACTTTCAAAATA+CGG - chr1_1:28743871-28743890 None:intergenic 20.0%
!! AGAGTTAATTATATATATGC+GGG + chr1_1:28743982-28744001 Msa0017340:three_prime_UTR 20.0%
!! CATGACTAATTTTGTATCAA+TGG + chr1_1:28742175-28742194 Msa0017340:CDS 25.0%
! AGATGATTGAATATCTACTT+AGG + chr1_1:28742587-28742606 Msa0017340:intron 25.0%
! CTAAATGTAGAGAAATACAA+AGG - chr1_1:28742660-28742679 None:intergenic 25.0%
! CTTTGTATTTCTCTACATTT+AGG + chr1_1:28742658-28742677 Msa0017340:intron 25.0%
! GAACAACCAAATTAGATTAT+AGG + chr1_1:28742945-28742964 Msa0017340:intron 25.0%
! CATGATCTATGTATAAGATT+TGG + chr1_1:28743014-28743033 Msa0017340:intron 25.0%
!! TAGCTCATAGTTGTTAATTT+TGG + chr1_1:28743660-28743679 Msa0017340:three_prime_UTR 25.0%
!!! AGAGAATGGTATAGTTTTTT+TGG + chr1_1:28743817-28743836 Msa0017340:three_prime_UTR 25.0%
! GGAATTAACTTTCAAAATAC+GGG - chr1_1:28743870-28743889 None:intergenic 25.0%
! TATGCATCAAAGACATTATA+AGG - chr1_1:28743891-28743910 None:intergenic 25.0%
! TTATAATGTCTTTGATGCAT+AGG + chr1_1:28743890-28743909 Msa0017340:three_prime_UTR 25.0%
!! CATGACTAATTTTGTATCAA+TGG + chr1_1:28742175-28742194 Msa0017340:CDS 25.0%
! AGATGATTGAATATCTACTT+AGG + chr1_1:28742587-28742606 Msa0017340:intron 25.0%
! CTAAATGTAGAGAAATACAA+AGG - chr1_1:28742660-28742679 None:intergenic 25.0%
! CTTTGTATTTCTCTACATTT+AGG + chr1_1:28742658-28742677 Msa0017340:intron 25.0%
! GAACAACCAAATTAGATTAT+AGG + chr1_1:28742945-28742964 Msa0017340:intron 25.0%
! CATGATCTATGTATAAGATT+TGG + chr1_1:28743014-28743033 Msa0017340:intron 25.0%
!! TAGCTCATAGTTGTTAATTT+TGG + chr1_1:28743660-28743679 Msa0017340:three_prime_UTR 25.0%
!!! AGAGAATGGTATAGTTTTTT+TGG + chr1_1:28743817-28743836 Msa0017340:three_prime_UTR 25.0%
! GGAATTAACTTTCAAAATAC+GGG - chr1_1:28743870-28743889 None:intergenic 25.0%
! TATGCATCAAAGACATTATA+AGG - chr1_1:28743891-28743910 None:intergenic 25.0%
! TTATAATGTCTTTGATGCAT+AGG + chr1_1:28743890-28743909 Msa0017340:three_prime_UTR 25.0%
! AGACGAAAATCTTTGTTTCA+AGG + chr1_1:28742008-28742027 Msa0017340:five_prime_UTR 30.0%
CATACACTTTATCTATCAAC+TGG + chr1_1:28742031-28742050 Msa0017340:five_prime_UTR 30.0%
TTTAAACCAACTGTTATTCG+AGG + chr1_1:28742449-28742468 Msa0017340:CDS 30.0%
! TGAATTTAGAGTTACCTTTG+AGG - chr1_1:28742528-28742547 None:intergenic 30.0%
! CAACTCTAGAAAGATAATTG+AGG + chr1_1:28742546-28742565 Msa0017340:intron 30.0%
TAGAGATCAAATTCGTATGA+AGG + chr1_1:28742806-28742825 Msa0017340:intron 30.0%
TAAAAAGGGTCGATTATATG+TGG + chr1_1:28742898-28742917 Msa0017340:intron 30.0%
AAAAAGGGTCGATTATATGT+GGG + chr1_1:28742899-28742918 Msa0017340:intron 30.0%
!!! AATTAGCTTTTCTGTTGTGA+AGG + chr1_1:28743183-28743202 Msa0017340:intron 30.0%
!!! ATTAGCTTTTCTGTTGTGAA+GGG + chr1_1:28743184-28743203 Msa0017340:intron 30.0%
ATGCAAAAAATAACAGCAAC+TGG + chr1_1:28743355-28743374 Msa0017340:CDS 30.0%
TGCAAAAAATAACAGCAACT+GGG + chr1_1:28743356-28743375 Msa0017340:CDS 30.0%
GATATTAACATGAGATTGCA+AGG - chr1_1:28743563-28743582 None:intergenic 30.0%
TCATGTTAATATCACTAGCT+TGG + chr1_1:28743570-28743589 Msa0017340:CDS 30.0%
! CATGTTAATATCACTAGCTT+GGG + chr1_1:28743571-28743590 Msa0017340:CDS 30.0%
AATCACTAGCTAGTAATAAC+AGG + chr1_1:28743743-28743762 Msa0017340:three_prime_UTR 30.0%
! AGACGAAAATCTTTGTTTCA+AGG + chr1_1:28742008-28742027 Msa0017340:five_prime_UTR 30.0%
CATACACTTTATCTATCAAC+TGG + chr1_1:28742031-28742050 Msa0017340:five_prime_UTR 30.0%
TTTAAACCAACTGTTATTCG+AGG + chr1_1:28742449-28742468 Msa0017340:CDS 30.0%
! TGAATTTAGAGTTACCTTTG+AGG - chr1_1:28742528-28742547 None:intergenic 30.0%
! CAACTCTAGAAAGATAATTG+AGG + chr1_1:28742546-28742565 Msa0017340:intron 30.0%
TAGAGATCAAATTCGTATGA+AGG + chr1_1:28742806-28742825 Msa0017340:intron 30.0%
TAAAAAGGGTCGATTATATG+TGG + chr1_1:28742898-28742917 Msa0017340:intron 30.0%
AAAAAGGGTCGATTATATGT+GGG + chr1_1:28742899-28742918 Msa0017340:intron 30.0%
!!! AATTAGCTTTTCTGTTGTGA+AGG + chr1_1:28743183-28743202 Msa0017340:intron 30.0%
!!! ATTAGCTTTTCTGTTGTGAA+GGG + chr1_1:28743184-28743203 Msa0017340:intron 30.0%
ATGCAAAAAATAACAGCAAC+TGG + chr1_1:28743355-28743374 Msa0017340:CDS 30.0%
TGCAAAAAATAACAGCAACT+GGG + chr1_1:28743356-28743375 Msa0017340:CDS 30.0%
GATATTAACATGAGATTGCA+AGG - chr1_1:28743563-28743582 None:intergenic 30.0%
TCATGTTAATATCACTAGCT+TGG + chr1_1:28743570-28743589 Msa0017340:CDS 30.0%
! CATGTTAATATCACTAGCTT+GGG + chr1_1:28743571-28743590 Msa0017340:CDS 30.0%
AATCACTAGCTAGTAATAAC+AGG + chr1_1:28743743-28743762 Msa0017340:three_prime_UTR 30.0%
CAACAAGAAGAACAAGAAAG+AGG + chr1_1:28742082-28742101 Msa0017340:CDS 35.0%
ACTACTTTCAAAGCTTCGAA+TGG + chr1_1:28742133-28742152 Msa0017340:CDS 35.0%
TTAGTCATGCATTGAATCAG+CGG - chr1_1:28742164-28742183 None:intergenic 35.0%
AAGAAACAGAAACAGCAACA+GGG - chr1_1:28742394-28742413 None:intergenic 35.0%
AAAGATAATTGAGGCTGTAC+TGG + chr1_1:28742555-28742574 Msa0017340:intron 35.0%
! TTTGAAGTGCTTACACATAC+AGG + chr1_1:28742696-28742715 Msa0017340:intron 35.0%
AGCTAACATTGATGCATTCA+TGG - chr1_1:28742755-28742774 None:intergenic 35.0%
GAAGGAGATATCAGATATGT+AGG + chr1_1:28742824-28742843 Msa0017340:intron 35.0%
ATGAACTTAGGTTCTTACTG+TGG - chr1_1:28742852-28742871 None:intergenic 35.0%
AGTAAGAACCTAAGTTCATG+TGG + chr1_1:28742853-28742872 Msa0017340:intron 35.0%
TATCTTCTCCACATGAACTT+AGG - chr1_1:28742864-28742883 None:intergenic 35.0%
AAAAGGGTCGATTATATGTG+GGG + chr1_1:28742900-28742919 Msa0017340:intron 35.0%
CAGAAAAATTTAGAGGCCAA+TGG + chr1_1:28742979-28742998 Msa0017340:intron 35.0%
AAATTTAGAGGCCAATGGTT+TGG + chr1_1:28742984-28743003 Msa0017340:intron 35.0%
! TTTTCCATCTACCTTTCCTA+GGG - chr1_1:28743065-28743084 None:intergenic 35.0%
! TTTTTCCATCTACCTTTCCT+AGG - chr1_1:28743066-28743085 None:intergenic 35.0%
! ACAGATGGAAATCAAGTTGT+TGG + chr1_1:28743310-28743329 Msa0017340:CDS 35.0%
! GTTTTTGTCAACTGCAACAA+AGG - chr1_1:28743407-28743426 None:intergenic 35.0%
! ATACTGTTGCATCTAAAGCA+TGG - chr1_1:28743429-28743448 None:intergenic 35.0%
! TGCTTTAGATGCAACAGTAT+CGG + chr1_1:28743429-28743448 Msa0017340:CDS 35.0%
! GTATCGGCATTATCTGTATT+TGG + chr1_1:28743445-28743464 Msa0017340:CDS 35.0%
TAAGATCCATCTTGAACTAG+TGG - chr1_1:28743689-28743708 None:intergenic 35.0%
! TTTGGCCTTCTAACTTATGT+TGG + chr1_1:28743835-28743854 Msa0017340:three_prime_UTR 35.0%
GTTGACCAACATAAGTTAGA+AGG - chr1_1:28743843-28743862 None:intergenic 35.0%
TTGAGACATTGCTTATCATG+TGG + chr1_1:28743950-28743969 Msa0017340:three_prime_UTR 35.0%
CAACAAGAAGAACAAGAAAG+AGG + chr1_1:28742082-28742101 Msa0017340:CDS 35.0%
ACTACTTTCAAAGCTTCGAA+TGG + chr1_1:28742133-28742152 Msa0017340:CDS 35.0%
TTAGTCATGCATTGAATCAG+CGG - chr1_1:28742164-28742183 None:intergenic 35.0%
AAGAAACAGAAACAGCAACA+GGG - chr1_1:28742394-28742413 None:intergenic 35.0%
AAAGATAATTGAGGCTGTAC+TGG + chr1_1:28742555-28742574 Msa0017340:intron 35.0%
! TTTGAAGTGCTTACACATAC+AGG + chr1_1:28742696-28742715 Msa0017340:intron 35.0%
AGCTAACATTGATGCATTCA+TGG - chr1_1:28742755-28742774 None:intergenic 35.0%
GAAGGAGATATCAGATATGT+AGG + chr1_1:28742824-28742843 Msa0017340:intron 35.0%
ATGAACTTAGGTTCTTACTG+TGG - chr1_1:28742852-28742871 None:intergenic 35.0%
AGTAAGAACCTAAGTTCATG+TGG + chr1_1:28742853-28742872 Msa0017340:intron 35.0%
TATCTTCTCCACATGAACTT+AGG - chr1_1:28742864-28742883 None:intergenic 35.0%
AAAAGGGTCGATTATATGTG+GGG + chr1_1:28742900-28742919 Msa0017340:intron 35.0%
CAGAAAAATTTAGAGGCCAA+TGG + chr1_1:28742979-28742998 Msa0017340:intron 35.0%
AAATTTAGAGGCCAATGGTT+TGG + chr1_1:28742984-28743003 Msa0017340:intron 35.0%
! TTTTCCATCTACCTTTCCTA+GGG - chr1_1:28743065-28743084 None:intergenic 35.0%
! TTTTTCCATCTACCTTTCCT+AGG - chr1_1:28743066-28743085 None:intergenic 35.0%
! ACAGATGGAAATCAAGTTGT+TGG + chr1_1:28743310-28743329 Msa0017340:CDS 35.0%
! GTTTTTGTCAACTGCAACAA+AGG - chr1_1:28743407-28743426 None:intergenic 35.0%
! ATACTGTTGCATCTAAAGCA+TGG - chr1_1:28743429-28743448 None:intergenic 35.0%
! TGCTTTAGATGCAACAGTAT+CGG + chr1_1:28743429-28743448 Msa0017340:CDS 35.0%
! GTATCGGCATTATCTGTATT+TGG + chr1_1:28743445-28743464 Msa0017340:CDS 35.0%
TAAGATCCATCTTGAACTAG+TGG - chr1_1:28743689-28743708 None:intergenic 35.0%
! TTTGGCCTTCTAACTTATGT+TGG + chr1_1:28743835-28743854 Msa0017340:three_prime_UTR 35.0%
GTTGACCAACATAAGTTAGA+AGG - chr1_1:28743843-28743862 None:intergenic 35.0%
TTGAGACATTGCTTATCATG+TGG + chr1_1:28743950-28743969 Msa0017340:three_prime_UTR 35.0%
TACGAGTGAGTGAGAATTTG+TGG + chr1_1:28741985-28742004 Msa0017340:five_prime_UTR 40.0%
TTGTCTTCCATCAAACAGCA+AGG - chr1_1:28742065-28742084 None:intergenic 40.0%
GAAGAACAAGAAAGAGGAGT+TGG + chr1_1:28742088-28742107 Msa0017340:CDS 40.0%
ACAAGAAAGAGGAGTTGGAA+TGG + chr1_1:28742093-28742112 Msa0017340:CDS 40.0%
CAAGAAAGAGGAGTTGGAAT+GGG + chr1_1:28742094-28742113 Msa0017340:CDS 40.0%
AAGAAAGAGGAGTTGGAATG+GGG + chr1_1:28742095-28742114 Msa0017340:CDS 40.0%
AGTGCTCTCTGTCTCAATAT+TGG + chr1_1:28742287-28742306 Msa0017340:CDS 40.0%
AACCCAAGGAATATCCAACT+CGG - chr1_1:28742366-28742385 None:intergenic 40.0%
GAAGAAACAGAAACAGCAAC+AGG - chr1_1:28742395-28742414 None:intergenic 40.0%
GCATTTCCTCGAATAACAGT+TGG - chr1_1:28742458-28742477 None:intergenic 40.0%
CATGTCTATAGCCAAACCAT+TGG - chr1_1:28742998-28743017 None:intergenic 40.0%
! TGTTTCTGATAGCTTTCCCT+AGG + chr1_1:28743046-28743065 Msa0017340:intron 40.0%
TCCTTCTCTAACCTTTGATC+TGG + chr1_1:28743138-28743157 Msa0017340:intron 40.0%
CCTTCTCTAACCTTTGATCT+GGG + chr1_1:28743139-28743158 Msa0017340:intron 40.0%
CTTCTCTAACCTTTGATCTG+GGG + chr1_1:28743140-28743159 Msa0017340:intron 40.0%
!! TAACCTTTGATCTGGGGTTT+TGG + chr1_1:28743146-28743165 Msa0017340:intron 40.0%
AATCCAAAACCCCAGATCAA+AGG - chr1_1:28743152-28743171 None:intergenic 40.0%
AGTTGAAGCAGCAAAGTTGT+TGG + chr1_1:28743237-28743256 Msa0017340:CDS 40.0%
!! AAGTTGTTGGCTCAAACAAG+TGG + chr1_1:28743250-28743269 Msa0017340:CDS 40.0%
AACAAAGGCAGCAATAAGAG+CGG - chr1_1:28743392-28743411 None:intergenic 40.0%
TTATCTGTATTTGGCGTTGC+AGG + chr1_1:28743454-28743473 Msa0017340:CDS 40.0%
CACTTGATAGATGCACTCTA+CGG + chr1_1:28743523-28743542 Msa0017340:CDS 40.0%
CAACTTACAAGAGCTACATG+CGG - chr1_1:28743611-28743630 None:intergenic 40.0%
TGGTATCCACTAGTTCAAGA+TGG + chr1_1:28743680-28743699 Msa0017340:three_prime_UTR 40.0%
AAGATGGATCTTAGTGACAG+TGG + chr1_1:28743696-28743715 Msa0017340:three_prime_UTR 40.0%
ATACCATTCTCTCTAGCGAA+GGG - chr1_1:28743809-28743828 None:intergenic 40.0%
TATACCATTCTCTCTAGCGA+AGG - chr1_1:28743810-28743829 None:intergenic 40.0%
AAGTTGTTCCTGAACTGTTG+AGG + chr1_1:28743927-28743946 Msa0017340:three_prime_UTR 40.0%
TACGAGTGAGTGAGAATTTG+TGG + chr1_1:28741985-28742004 Msa0017340:five_prime_UTR 40.0%
TTGTCTTCCATCAAACAGCA+AGG - chr1_1:28742065-28742084 None:intergenic 40.0%
GAAGAACAAGAAAGAGGAGT+TGG + chr1_1:28742088-28742107 Msa0017340:CDS 40.0%
ACAAGAAAGAGGAGTTGGAA+TGG + chr1_1:28742093-28742112 Msa0017340:CDS 40.0%
CAAGAAAGAGGAGTTGGAAT+GGG + chr1_1:28742094-28742113 Msa0017340:CDS 40.0%
AAGAAAGAGGAGTTGGAATG+GGG + chr1_1:28742095-28742114 Msa0017340:CDS 40.0%
AGTGCTCTCTGTCTCAATAT+TGG + chr1_1:28742287-28742306 Msa0017340:CDS 40.0%
AACCCAAGGAATATCCAACT+CGG - chr1_1:28742366-28742385 None:intergenic 40.0%
GAAGAAACAGAAACAGCAAC+AGG - chr1_1:28742395-28742414 None:intergenic 40.0%
GCATTTCCTCGAATAACAGT+TGG - chr1_1:28742458-28742477 None:intergenic 40.0%
CATGTCTATAGCCAAACCAT+TGG - chr1_1:28742998-28743017 None:intergenic 40.0%
! TGTTTCTGATAGCTTTCCCT+AGG + chr1_1:28743046-28743065 Msa0017340:intron 40.0%
TCCTTCTCTAACCTTTGATC+TGG + chr1_1:28743138-28743157 Msa0017340:intron 40.0%
CCTTCTCTAACCTTTGATCT+GGG + chr1_1:28743139-28743158 Msa0017340:intron 40.0%
CTTCTCTAACCTTTGATCTG+GGG + chr1_1:28743140-28743159 Msa0017340:intron 40.0%
!! TAACCTTTGATCTGGGGTTT+TGG + chr1_1:28743146-28743165 Msa0017340:intron 40.0%
AATCCAAAACCCCAGATCAA+AGG - chr1_1:28743152-28743171 None:intergenic 40.0%
AGTTGAAGCAGCAAAGTTGT+TGG + chr1_1:28743237-28743256 Msa0017340:CDS 40.0%
!! AAGTTGTTGGCTCAAACAAG+TGG + chr1_1:28743250-28743269 Msa0017340:CDS 40.0%
AACAAAGGCAGCAATAAGAG+CGG - chr1_1:28743392-28743411 None:intergenic 40.0%
TTATCTGTATTTGGCGTTGC+AGG + chr1_1:28743454-28743473 Msa0017340:CDS 40.0%
CACTTGATAGATGCACTCTA+CGG + chr1_1:28743523-28743542 Msa0017340:CDS 40.0%
CAACTTACAAGAGCTACATG+CGG - chr1_1:28743611-28743630 None:intergenic 40.0%
TGGTATCCACTAGTTCAAGA+TGG + chr1_1:28743680-28743699 Msa0017340:three_prime_UTR 40.0%
AAGATGGATCTTAGTGACAG+TGG + chr1_1:28743696-28743715 Msa0017340:three_prime_UTR 40.0%
ATACCATTCTCTCTAGCGAA+GGG - chr1_1:28743809-28743828 None:intergenic 40.0%
TATACCATTCTCTCTAGCGA+AGG - chr1_1:28743810-28743829 None:intergenic 40.0%
AAGTTGTTCCTGAACTGTTG+AGG + chr1_1:28743927-28743946 Msa0017340:three_prime_UTR 40.0%
!! TCCATCACCTTGCTGTTTGA+TGG + chr1_1:28742055-28742074 Msa0017340:exon 45.0%
TCCATCAAACAGCAAGGTGA+TGG - chr1_1:28742059-28742078 None:intergenic 45.0%
TGGAATGGGGAAGAAAGACA+TGG + chr1_1:28742108-28742127 Msa0017340:CDS 45.0%
GCGAATACTCTCTTATCAGC+TGG + chr1_1:28742206-28742225 Msa0017340:CDS 45.0%
TTAGCAGCAGCTATCATAGC+AGG - chr1_1:28742335-28742354 None:intergenic 45.0%
! CTCCGAGTTGGATATTCCTT+GGG + chr1_1:28742361-28742380 Msa0017340:CDS 45.0%
!! GTTGAACGCAAGCATCGAAA+CGG - chr1_1:28742421-28742440 None:intergenic 45.0%
GATGCTTGCGTTCAACTTGT+TGG + chr1_1:28742425-28742444 Msa0017340:CDS 45.0%
GGAAAGAGCGATGATTTCAG+AGG - chr1_1:28742480-28742499 None:intergenic 45.0%
AGAGGATTGAAGTGAGGAAG+AGG - chr1_1:28742501-28742520 None:intergenic 45.0%
CTGATAGCTTTCCCTAGGAA+AGG + chr1_1:28743051-28743070 Msa0017340:intron 45.0%
CTTTCCCTAGGAAAGGTAGA+TGG + chr1_1:28743058-28743077 Msa0017340:intron 45.0%
CCCAGATCAAAGGTTAGAGA+AGG - chr1_1:28743142-28743161 None:intergenic 45.0%
! CTTTTCTGTTGTGAAGGGTG+TGG + chr1_1:28743189-28743208 Msa0017340:intron 45.0%
GGACAGTACTCATGGTTCAA+TGG + chr1_1:28743210-28743229 Msa0017340:CDS 45.0%
AAGTTGTTGGCGCTCACAAT+GGG + chr1_1:28743323-28743342 Msa0017340:CDS 45.0%
CTGGGAATGAAGATGGCTAA+AGG + chr1_1:28743481-28743500 Msa0017340:CDS 45.0%
CGCATGTAGCTCTTGTAAGT+TGG + chr1_1:28743609-28743628 Msa0017340:three_prime_UTR 45.0%
TGTCTCAACCTCAACAGTTC+AGG - chr1_1:28743938-28743957 None:intergenic 45.0%
!! TCCATCACCTTGCTGTTTGA+TGG + chr1_1:28742055-28742074 Msa0017340:exon 45.0%
TCCATCAAACAGCAAGGTGA+TGG - chr1_1:28742059-28742078 None:intergenic 45.0%
TGGAATGGGGAAGAAAGACA+TGG + chr1_1:28742108-28742127 Msa0017340:CDS 45.0%
GCGAATACTCTCTTATCAGC+TGG + chr1_1:28742206-28742225 Msa0017340:CDS 45.0%
TTAGCAGCAGCTATCATAGC+AGG - chr1_1:28742335-28742354 None:intergenic 45.0%
! CTCCGAGTTGGATATTCCTT+GGG + chr1_1:28742361-28742380 Msa0017340:CDS 45.0%
!! GTTGAACGCAAGCATCGAAA+CGG - chr1_1:28742421-28742440 None:intergenic 45.0%
GATGCTTGCGTTCAACTTGT+TGG + chr1_1:28742425-28742444 Msa0017340:CDS 45.0%
GGAAAGAGCGATGATTTCAG+AGG - chr1_1:28742480-28742499 None:intergenic 45.0%
AGAGGATTGAAGTGAGGAAG+AGG - chr1_1:28742501-28742520 None:intergenic 45.0%
CTGATAGCTTTCCCTAGGAA+AGG + chr1_1:28743051-28743070 Msa0017340:intron 45.0%
CTTTCCCTAGGAAAGGTAGA+TGG + chr1_1:28743058-28743077 Msa0017340:intron 45.0%
CCCAGATCAAAGGTTAGAGA+AGG - chr1_1:28743142-28743161 None:intergenic 45.0%
! CTTTTCTGTTGTGAAGGGTG+TGG + chr1_1:28743189-28743208 Msa0017340:intron 45.0%
GGACAGTACTCATGGTTCAA+TGG + chr1_1:28743210-28743229 Msa0017340:CDS 45.0%
AAGTTGTTGGCGCTCACAAT+GGG + chr1_1:28743323-28743342 Msa0017340:CDS 45.0%
CTGGGAATGAAGATGGCTAA+AGG + chr1_1:28743481-28743500 Msa0017340:CDS 45.0%
CGCATGTAGCTCTTGTAAGT+TGG + chr1_1:28743609-28743628 Msa0017340:three_prime_UTR 45.0%
TGTCTCAACCTCAACAGTTC+AGG - chr1_1:28743938-28743957 None:intergenic 45.0%
TCGAGAGAATGAACCATCGC+AGG - chr1_1:28742239-28742258 None:intergenic 50.0%
! GCTCCGAGTTGGATATTCCT+TGG + chr1_1:28742360-28742379 Msa0017340:CDS 50.0%
TCAATCCTCTGCTGCCTCAA+AGG + chr1_1:28742511-28742530 Msa0017340:CDS 50.0%
!! AGTTACCTTTGAGGCAGCAG+AGG - chr1_1:28742519-28742538 None:intergenic 50.0%
! AAGGGTGTGGACAGTACTCA+TGG + chr1_1:28743202-28743221 Msa0017340:intron 50.0%
GTGCCATAGTTGCAGTGTCA+GGG + chr1_1:28743272-28743291 Msa0017340:CDS 50.0%
TGCCATAGTTGCAGTGTCAG+GGG + chr1_1:28743273-28743292 Msa0017340:CDS 50.0%
TCCATCTGTGACGATGTCAG+TGG - chr1_1:28743299-28743318 None:intergenic 50.0%
CAAGTTGTTGGCGCTCACAA+TGG + chr1_1:28743322-28743341 Msa0017340:CDS 50.0%
AGTTGTTGGCGCTCACAATG+GGG + chr1_1:28743324-28743343 Msa0017340:CDS 50.0%
AGGTGAGCTGGGAATGAAGA+TGG + chr1_1:28743474-28743493 Msa0017340:CDS 50.0%
CTAAAGGTCCTGCATCGTTG+CGG + chr1_1:28743497-28743516 Msa0017340:CDS 50.0%
TTGCCCTTCGCTAGAGAGAA+TGG + chr1_1:28743803-28743822 Msa0017340:three_prime_UTR 50.0%
TCGAGAGAATGAACCATCGC+AGG - chr1_1:28742239-28742258 None:intergenic 50.0%
! GCTCCGAGTTGGATATTCCT+TGG + chr1_1:28742360-28742379 Msa0017340:CDS 50.0%
TCAATCCTCTGCTGCCTCAA+AGG + chr1_1:28742511-28742530 Msa0017340:CDS 50.0%
!! AGTTACCTTTGAGGCAGCAG+AGG - chr1_1:28742519-28742538 None:intergenic 50.0%
! AAGGGTGTGGACAGTACTCA+TGG + chr1_1:28743202-28743221 Msa0017340:intron 50.0%
GTGCCATAGTTGCAGTGTCA+GGG + chr1_1:28743272-28743291 Msa0017340:CDS 50.0%
TGCCATAGTTGCAGTGTCAG+GGG + chr1_1:28743273-28743292 Msa0017340:CDS 50.0%
TCCATCTGTGACGATGTCAG+TGG - chr1_1:28743299-28743318 None:intergenic 50.0%
CAAGTTGTTGGCGCTCACAA+TGG + chr1_1:28743322-28743341 Msa0017340:CDS 50.0%
AGTTGTTGGCGCTCACAATG+GGG + chr1_1:28743324-28743343 Msa0017340:CDS 50.0%
AGGTGAGCTGGGAATGAAGA+TGG + chr1_1:28743474-28743493 Msa0017340:CDS 50.0%
CTAAAGGTCCTGCATCGTTG+CGG + chr1_1:28743497-28743516 Msa0017340:CDS 50.0%
TTGCCCTTCGCTAGAGAGAA+TGG + chr1_1:28743803-28743822 Msa0017340:three_prime_UTR 50.0%
TGCTAAGCTCTGCTCCGAGT+TGG + chr1_1:28742349-28742368 Msa0017340:CDS 55.0%
GCAACAGGGTCAAGAACCCA+AGG - chr1_1:28742380-28742399 None:intergenic 55.0%
GGCAGCAGAGGATTGAAGTG+AGG - chr1_1:28742507-28742526 None:intergenic 55.0%
! GGTGCCATAGTTGCAGTGTC+AGG + chr1_1:28743271-28743290 Msa0017340:CDS 55.0%
GCCACTGACATCGTCACAGA+TGG + chr1_1:28743295-28743314 Msa0017340:CDS 55.0%
ATTTGGCGTTGCAGGTGAGC+TGG + chr1_1:28743462-28743481 Msa0017340:CDS 55.0%
TTTGGCGTTGCAGGTGAGCT+GGG + chr1_1:28743463-28743482 Msa0017340:CDS 55.0%
AAGTGCATCCGCAACGATGC+AGG - chr1_1:28743508-28743527 None:intergenic 55.0%
TGCTAAGCTCTGCTCCGAGT+TGG + chr1_1:28742349-28742368 Msa0017340:CDS 55.0%
GCAACAGGGTCAAGAACCCA+AGG - chr1_1:28742380-28742399 None:intergenic 55.0%
GGCAGCAGAGGATTGAAGTG+AGG - chr1_1:28742507-28742526 None:intergenic 55.0%
! GGTGCCATAGTTGCAGTGTC+AGG + chr1_1:28743271-28743290 Msa0017340:CDS 55.0%
GCCACTGACATCGTCACAGA+TGG + chr1_1:28743295-28743314 Msa0017340:CDS 55.0%
ATTTGGCGTTGCAGGTGAGC+TGG + chr1_1:28743462-28743481 Msa0017340:CDS 55.0%
TTTGGCGTTGCAGGTGAGCT+GGG + chr1_1:28743463-28743482 Msa0017340:CDS 55.0%
AAGTGCATCCGCAACGATGC+AGG - chr1_1:28743508-28743527 None:intergenic 55.0%
AGCTGGTGCTTCACCTGCGA+TGG + chr1_1:28742223-28742242 Msa0017340:CDS 60.0%
CTGACGCGTGGCGTGAAATC+TGG - chr1_1:28742269-28742288 None:intergenic 60.0%
!! AGACAGAGAGCACTGACGCG+TGG - chr1_1:28742281-28742300 None:intergenic 60.0%
GGCCCCTGACACTGCAACTA+TGG - chr1_1:28743278-28743297 None:intergenic 60.0%
TGTTGGCGCTCACAATGGGG+TGG + chr1_1:28743327-28743346 Msa0017340:CDS 60.0%
AGCTGGTGCTTCACCTGCGA+TGG + chr1_1:28742223-28742242 Msa0017340:CDS 60.0%
CTGACGCGTGGCGTGAAATC+TGG - chr1_1:28742269-28742288 None:intergenic 60.0%
!! AGACAGAGAGCACTGACGCG+TGG - chr1_1:28742281-28742300 None:intergenic 60.0%
GGCCCCTGACACTGCAACTA+TGG - chr1_1:28743278-28743297 None:intergenic 60.0%
TGTTGGCGCTCACAATGGGG+TGG + chr1_1:28743327-28743346 Msa0017340:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 28741964 28744069 28741964 ID=Msa0017340;Name=Msa0017340
chr1_1 mRNA 28741964 28744069 28741964 ID=Msa0017340-mRNA-1;Parent=Msa0017340;Name=Msa0017340-mRNA-1;_AED=0.08;_eAED=0.08;_QI=110|1|1|1|1|1|2|472|283
chr1_1 exon 28741964 28742532 28741964 ID=Msa0017340-mRNA-1:exon:9586;Parent=Msa0017340-mRNA-1
chr1_1 exon 28743205 28744069 28743205 ID=Msa0017340-mRNA-1:exon:9587;Parent=Msa0017340-mRNA-1
chr1_1 five_prime_UTR 28741964 28742073 28741964 ID=Msa0017340-mRNA-1:five_prime_utr;Parent=Msa0017340-mRNA-1
chr1_1 CDS 28742074 28742532 28742074 ID=Msa0017340-mRNA-1:cds;Parent=Msa0017340-mRNA-1
chr1_1 CDS 28743205 28743597 28743205 ID=Msa0017340-mRNA-1:cds;Parent=Msa0017340-mRNA-1
chr1_1 three_prime_UTR 28743598 28744069 28743598 ID=Msa0017340-mRNA-1:three_prime_utr;Parent=Msa0017340-mRNA-1
Gene Sequence

>Msa0017340

ATGGAAGACAACAAGAAGAACAAGAAAGAGGAGTTGGAATGGGGAAGAAAGACATGGAAACTACTTTCAAAGCTTCGAATGGAATCGCCGCTGATTCAATGCATGACTAATTTTGTATCAATGGATTTAATGGCGAATACTCTCTTATCAGCTGGTGCTTCACCTGCGATGGTTCATTCTCTCGAAGAGATACCAGATTTCACGCCACGCGTCAGTGCTCTCTGTCTCAATATTGGAACGCTTTCATCTTCTTCTCTTCCTGCTATGATAGCTGCTGCTAAGCTCTGCTCCGAGTTGGATATTCCTTGGGTTCTTGACCCTGTTGCTGTTTCTGTTTCTTCTTTCCGTTTCGATGCTTGCGTTCAACTTGTTGGATTTAAACCAACTGTTATTCGAGGAAATGCCTCTGAAATCATCGCTCTTTCCTCTTCCTCACTTCAATCCTCTGCTGCCTCAAAGGGTGTGGACAGTACTCATGGTTCAATGGATGCAGTTGAAGCAGCAAAGTTGTTGGCTCAAACAAGTGGTGCCATAGTTGCAGTGTCAGGGGCCACTGACATCGTCACAGATGGAAATCAAGTTGTTGGCGCTCACAATGGGGTGGCGCTGATGCAAAAAATAACAGCAACTGGGTGTGCAGTCACCGCTCTTATTGCTGCCTTTGTTGCAGTTGACAAAAACCATGCTTTAGATGCAACAGTATCGGCATTATCTGTATTTGGCGTTGCAGGTGAGCTGGGAATGAAGATGGCTAAAGGTCCTGCATCGTTGCGGATGCACTTGATAGATGCACTCTACGGTCTTGATGAAGCAACCTTGCAATCTCATGTTAATATCACTAGCTTGGGTTGA
Protein sequence

>Msa0017340

MEDNKKNKKEELEWGRKTWKLLSKLRMESPLIQCMTNFVSMDLMANTLLSAGASPAMVHSLEEIPDFTPRVSALCLNIGTLSSSSLPAMIAAAKLCSELDIPWVLDPVAVSVSSFRFDACVQLVGFKPTVIRGNASEIIALSSSSLQSSAASKGVDSTHGSMDAVEAAKLLAQTSGAIVAVSGATDIVTDGNQVVGAHNGVALMQKITATGCAVTALIAAFVAVDKNHALDATVSALSVFGVAGELGMKMAKGPASLRMHLIDALYGLDEATLQSHVNITSLG*