AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0020290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0020290 MtrunA17_Chr1g0171501 95.962 421 17 0 285 705 186 606 0.0 823
Msa0020290 MtrunA17_Chr1g0171501 91.053 190 10 3 1 187 1 186 2.19e-92 299
Msa0020290 MtrunA17_Chr7g0256181 64.608 421 149 0 285 705 203 623 0.0 587
Msa0020290 MtrunA17_Chr7g0256181 40.465 215 98 7 1 192 1 208 2.94e-24 108
Msa0020290 MtrunA17_Chr1g0211201 58.152 184 27 2 398 581 1 134 7.66e-56 186
Msa0020290 MtrunA17_Chr2g0328121 27.512 418 293 5 289 696 94 511 9.91e-47 173
Msa0020290 MtrunA17_Chr1g0211211 86.207 87 12 0 619 705 1 87 1.14e-44 154
Msa0020290 MtrunA17_Chr8g0368151 27.848 395 264 9 305 683 89 478 1.54e-34 137
Msa0020290 MtrunA17_Chr2g0282091 24.819 415 278 9 286 679 76 477 8.32e-31 127
Msa0020290 MtrunA17_Chr1g0185601 24.938 401 279 8 294 679 93 486 1.96e-26 114
Msa0020290 MtrunA17_Chr8g0359961 24.202 376 270 9 286 649 81 453 9.23e-26 111
Msa0020290 MtrunA17_Chr2g0324251 25.066 379 266 6 286 648 80 456 3.80e-22 100
Msa0020290 MtrunA17_Chr2g0303221 24.468 376 268 9 286 649 79 450 3.94e-21 97.4
Msa0020290 MtrunA17_Chr4g0021331 23.360 381 268 8 286 649 75 448 8.39e-21 96.3
Msa0020290 MtrunA17_Chr1g0155351 27.059 255 174 7 294 541 110 359 4.66e-20 93.2
Msa0020290 MtrunA17_Chr1g0194521 24.064 374 264 13 286 646 138 504 8.62e-20 93.6
Msa0020290 MtrunA17_Chr3g0132571 24.020 408 286 11 289 679 88 488 1.31e-18 89.7
Msa0020290 MtrunA17_Chr3g0089851 22.642 265 195 5 403 660 198 459 7.27e-16 80.9
Msa0020290 MtrunA17_Chr1g0210801 22.466 365 271 7 332 689 169 528 1.15e-15 80.9
Msa0020290 MtrunA17_Chr1g0210801 24.812 266 194 4 344 603 281 546 4.15e-14 75.9
Msa0020290 MtrunA17_Chr3g0099661 20.900 311 230 6 360 660 473 777 1.44e-15 80.9
Msa0020290 MtrunA17_Chr3g0099661 20.210 381 293 8 289 659 187 566 4.26e-12 69.7
Msa0020290 MtrunA17_Chr3g0099661 22.727 418 278 11 309 682 350 766 3.37e-11 67.0
Msa0020290 MtrunA17_Chr1g0196741 22.977 309 232 5 334 638 280 586 3.59e-14 76.3
Msa0020290 MtrunA17_Chr7g0256621 21.749 446 306 12 222 637 21 453 2.12e-13 73.6
Msa0020290 MtrunA17_Chr5g0419551 23.410 346 213 11 340 670 355 663 2.68e-13 73.6
Msa0020290 MtrunA17_Chr1g0166071 21.944 360 267 7 342 692 275 629 4.30e-13 72.8
Msa0020290 MtrunA17_Chr1g0166071 24.696 247 163 5 399 637 168 399 6.36e-11 65.9
Msa0020290 MtrunA17_Chr1g0147171 22.523 333 251 5 340 666 145 476 6.95e-13 72.0
Msa0020290 MtrunA17_Chr7g0265721 19.394 330 256 4 332 660 117 437 9.99e-13 71.6
Msa0020290 MtrunA17_Chr5g0434021 21.791 335 237 9 342 663 331 653 2.15e-12 70.9
Msa0020290 MtrunA17_Chr5g0417961 21.727 359 269 6 342 692 274 628 2.21e-12 70.5
Msa0020290 MtrunA17_Chr3g0143851 23.496 349 221 7 344 682 283 595 2.68e-12 70.1
Msa0020290 MtrunA17_Chr3g0143851 21.402 271 204 5 381 645 149 416 5.20e-11 66.2
Msa0020290 MtrunA17_Chr8g0390501 21.068 337 253 7 340 666 114 447 3.43e-12 69.7
Msa0020290 MtrunA17_Chr1g0168811 23.901 364 224 9 374 690 252 609 3.60e-12 69.7
Msa0020290 MtrunA17_Chr1g0168811 21.575 292 220 5 398 682 242 531 3.92e-12 69.7
Msa0020290 MtrunA17_Chr2g0290441 22.527 364 260 9 316 664 88 444 4.77e-12 69.3
Msa0020290 MtrunA17_Chr3g0136851 20.596 369 249 7 336 663 163 528 5.60e-12 69.3
Msa0020290 MtrunA17_Chr4g0059671 20.891 359 263 8 340 684 209 560 6.09e-12 69.3
Msa0020290 MtrunA17_Chr2g0297991 22.063 349 223 7 332 638 410 751 8.17e-12 68.9
Msa0020290 MtrunA17_Chr2g0297991 22.120 434 308 11 240 659 145 562 1.15e-11 68.2
Msa0020290 MtrunA17_Chr4g0076151 21.233 292 225 3 378 664 185 476 1.31e-11 68.2
Msa0020290 MtrunA17_Chr5g0396041 22.642 265 198 4 348 607 312 574 1.43e-11 68.2
Msa0020290 MtrunA17_Chr3g0125131 20.379 422 286 8 278 692 75 453 1.46e-11 67.4
Msa0020290 MtrunA17_Chr8g0390041 23.183 289 204 7 361 638 166 447 1.58e-11 67.4
Msa0020290 MtrunA17_Chr8g0382891 21.212 297 223 5 341 627 119 414 2.55e-11 66.6
Msa0020290 MtrunA17_Chr4g0033981 21.691 272 208 3 393 660 307 577 2.84e-11 67.0
Msa0020290 MtrunA17_Chr8g0359551 24.476 286 202 6 362 638 165 445 4.24e-11 66.2
Msa0020290 MtrunA17_Chr5g0407151 22.526 293 219 6 356 641 293 584 4.46e-11 66.2
Msa0020290 MtrunA17_Chr7g0236501 23.228 254 182 6 391 635 239 488 4.52e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0020290 AT1G80270.1 60.291 413 163 1 294 705 184 596 0.0 544
Msa0020290 AT1G80270.1 36.735 147 74 3 56 192 43 180 1.56e-13 74.3
Msa0020290 AT1G80270.3 60.291 413 163 1 294 705 184 596 0.0 544
Msa0020290 AT1G80270.3 36.735 147 74 3 56 192 43 180 1.56e-13 74.3
Msa0020290 AT1G80270.2 60.291 413 163 1 294 705 184 596 0.0 544
Msa0020290 AT1G80270.2 36.735 147 74 3 56 192 43 180 1.56e-13 74.3
Msa0020290 AT1G80270.5 60.291 413 163 1 294 705 184 596 0.0 544
Msa0020290 AT1G80270.5 36.735 147 74 3 56 192 43 180 1.56e-13 74.3
Msa0020290 AT1G80270.4 60.291 413 163 1 294 705 184 596 0.0 544
Msa0020290 AT1G80270.4 36.735 147 74 3 56 192 43 180 1.56e-13 74.3
Msa0020290 AT1G15480.1 57.346 422 179 1 285 705 173 594 6.80e-174 510
Msa0020290 AT1G15480.1 43.548 124 56 3 73 192 65 178 9.22e-15 78.2
Msa0020290 AT3G15590.1 54.722 413 186 1 294 705 197 609 9.20e-156 464
Msa0020290 AT3G15590.2 54.722 413 186 1 294 705 197 609 9.20e-156 464
Msa0020290 AT1G07590.1 27.750 400 279 4 293 682 120 519 5.54e-38 149
Msa0020290 AT1G60770.1 27.778 396 265 9 305 684 89 479 3.97e-36 143
Msa0020290 AT2G20710.1 29.365 378 247 9 287 648 83 456 1.65e-33 135
Msa0020290 AT4G21705.1 24.936 389 271 8 286 659 73 455 5.83e-32 130
Msa0020290 AT2G20710.2 29.050 358 238 7 303 648 8 361 5.42e-31 126
Msa0020290 AT4G02820.1 27.387 398 269 8 294 679 117 506 1.75e-28 120
Msa0020290 AT5G27460.1 25.980 408 280 9 289 679 89 491 8.43e-27 115
Msa0020290 AT1G02150.1 24.119 369 256 10 294 645 123 484 6.38e-25 109
Msa0020290 AT1G02370.1 27.019 322 224 9 289 603 122 439 8.64e-23 103
Msa0020290 AT4G01990.1 29.455 275 183 10 293 559 95 366 1.20e-22 102
Msa0020290 AT3G23020.1 22.695 423 296 9 292 692 241 654 6.10e-18 89.0
Msa0020290 AT2G35130.3 22.569 288 218 3 382 665 235 521 4.63e-17 85.5
Msa0020290 AT2G35130.3 23.759 282 209 4 328 603 284 565 5.22e-13 72.8
Msa0020290 AT2G35130.1 22.569 288 218 3 382 665 238 524 5.18e-17 85.5
Msa0020290 AT2G35130.1 23.759 282 209 4 328 603 287 568 5.77e-13 72.8
Msa0020290 AT5G02860.1 23.059 425 267 9 292 664 157 573 5.22e-17 85.9
Msa0020290 AT5G02860.1 22.152 316 236 5 342 652 282 592 3.89e-15 80.1
Msa0020290 AT5G02860.1 19.578 332 253 6 362 683 442 769 6.95e-11 66.2
Msa0020290 AT5G02860.4 23.059 425 267 9 292 664 157 573 5.22e-17 85.9
Msa0020290 AT5G02860.4 22.152 316 236 5 342 652 282 592 3.89e-15 80.1
Msa0020290 AT5G02860.4 19.578 332 253 6 362 683 442 769 6.95e-11 66.2
Msa0020290 AT5G02860.2 23.059 425 267 9 292 664 157 573 5.22e-17 85.9
Msa0020290 AT5G02860.2 22.152 316 236 5 342 652 282 592 3.89e-15 80.1
Msa0020290 AT5G02860.2 19.578 332 253 6 362 683 442 769 6.95e-11 66.2
Msa0020290 AT5G02860.5 23.059 425 267 9 292 664 157 573 5.22e-17 85.9
Msa0020290 AT5G02860.5 22.152 316 236 5 342 652 282 592 3.89e-15 80.1
Msa0020290 AT5G02860.5 19.578 332 253 6 362 683 442 769 6.95e-11 66.2
Msa0020290 AT5G02860.3 23.059 425 267 9 292 664 157 573 5.22e-17 85.9
Msa0020290 AT5G02860.3 22.152 316 236 5 342 652 282 592 3.89e-15 80.1
Msa0020290 AT5G02860.3 19.578 332 253 6 362 683 442 769 6.95e-11 66.2
Msa0020290 AT2G35130.2 22.569 288 218 3 382 665 260 546 6.26e-17 85.5
Msa0020290 AT2G35130.2 23.759 282 209 4 328 603 309 590 8.37e-13 72.0
Msa0020290 AT4G39620.2 24.370 357 239 9 340 682 69 408 1.07e-16 84.3
Msa0020290 AT1G28020.1 27.602 221 150 5 294 507 92 309 1.37e-16 83.6
Msa0020290 AT4G39620.1 24.370 357 239 9 340 682 69 408 2.19e-16 83.6
Msa0020290 AT4G16390.1 20.822 365 283 4 306 664 106 470 1.97e-14 77.4
Msa0020290 AT3G59040.1 22.186 311 232 6 339 642 139 446 2.37e-14 77.0
Msa0020290 AT3G59040.2 22.186 311 232 6 339 642 146 453 3.91e-14 76.3
Msa0020290 AT2G31400.1 21.345 342 258 7 369 702 263 601 1.08e-12 72.0
Msa0020290 AT2G31400.2 21.345 342 258 7 369 702 263 601 1.08e-12 72.0
Msa0020290 AT1G02060.1 21.958 378 253 8 293 660 88 433 1.52e-12 71.6
Msa0020290 AT5G16640.1 24.107 336 235 9 362 684 174 502 1.60e-12 70.9
Msa0020290 AT2G17140.1 21.724 290 216 4 403 682 142 430 2.40e-12 70.9
Msa0020290 AT2G17140.2 21.724 290 216 4 403 682 142 430 2.40e-12 70.9
Msa0020290 AT1G43010.1 27.528 178 121 4 286 461 84 255 2.42e-12 68.2
Msa0020290 AT5G09450.1 20.784 255 191 6 294 541 111 361 2.53e-12 69.7
Msa0020290 AT2G18940.1 21.144 402 306 7 290 682 266 665 2.74e-12 70.9
Msa0020290 AT2G18940.1 20.988 324 249 4 342 659 213 535 3.73e-12 70.5
Msa0020290 AT1G74850.1 21.405 299 227 5 391 682 159 456 2.93e-12 70.9
Msa0020290 AT3G06920.1 22.846 267 191 8 406 663 550 810 3.94e-12 70.5
Msa0020290 AT3G06920.1 20.120 502 333 11 242 682 197 691 7.72e-11 66.2
Msa0020290 AT3G06920.2 22.846 267 191 8 406 663 564 824 4.40e-12 70.1
Msa0020290 AT3G06920.2 20.120 502 333 11 242 682 211 705 7.45e-11 66.2
Msa0020290 AT3G06920.3 22.846 267 191 8 406 663 564 824 4.40e-12 70.1
Msa0020290 AT3G06920.3 20.120 502 333 11 242 682 211 705 7.45e-11 66.2
Msa0020290 AT3G22470.1 19.708 274 215 3 394 663 231 503 5.47e-12 69.7
Msa0020290 AT5G21222.1 21.192 302 223 6 399 689 380 677 8.85e-12 69.3
Msa0020290 AT5G21222.2 21.192 302 223 6 399 689 380 677 8.85e-12 69.3
Msa0020290 AT5G21222.4 21.192 302 223 6 399 689 380 677 8.85e-12 69.3
Msa0020290 AT5G21222.3 21.192 302 223 6 399 689 380 677 8.85e-12 69.3
Msa0020290 AT1G09820.1 21.519 316 224 10 360 660 174 480 1.27e-11 68.6
Msa0020290 AT1G12700.3 21.176 255 196 3 394 644 230 483 2.85e-11 67.4
Msa0020290 AT1G12700.2 21.176 255 196 3 394 644 230 483 2.85e-11 67.4
Msa0020290 AT1G12700.1 21.176 255 196 3 394 644 214 467 2.86e-11 67.4
Msa0020290 AT1G20300.1 24.473 237 171 4 407 638 150 383 3.13e-11 67.0
Msa0020290 AT1G12775.1 18.873 355 266 6 362 700 216 564 4.29e-11 66.6
Msa0020290 AT4G31850.1 23.839 323 232 7 331 646 359 674 4.53e-11 67.0
Msa0020290 AT3G04760.1 21.607 361 266 8 285 630 95 453 5.06e-11 66.2
Msa0020290 AT1G73710.1 20.305 394 269 9 342 692 308 699 5.58e-11 66.6
Msa0020290 AT1G13630.3 22.526 293 219 5 399 684 192 483 6.19e-11 66.2
Msa0020290 AT1G13630.4 22.526 293 219 5 399 684 330 621 6.26e-11 66.2
Msa0020290 AT1G13630.6 22.526 293 219 5 399 684 155 446 6.69e-11 66.2
Msa0020290 AT1G13630.5 22.526 293 219 5 399 684 317 608 7.25e-11 66.2
Msa0020290 AT5G25630.1 24.302 358 222 8 354 665 130 484 7.64e-11 65.9
Msa0020290 AT1G13630.2 22.526 293 219 5 399 684 325 616 8.08e-11 65.9
Msa0020290 AT2G15630.1 20.521 307 241 3 337 641 153 458 8.84e-11 65.9
Msa0020290 AT3G11380.1 21.860 430 239 15 294 660 99 494 8.85e-11 65.5
Msa0020290 AT1G19720.1 20.420 333 253 5 344 672 221 545 9.51e-11 65.9

Find 181 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCGCCTTTATGCAATTC+TGG 0.131994 1_1:-35240589 Msa0020290:CDS
AATTCTCCTCTGAAAGAATT+TGG 0.158452 1_1:+35241044 None:intergenic
AGAAGAGGCAATAAATAAAT+AGG 0.199362 1_1:-35245548 None:intergenic
CTTTGGTAGGCCACGCAATT+TGG 0.211951 1_1:+35241091 None:intergenic
TTGAGATGATGTCAAATAAA+TGG 0.223409 1_1:-35240443 Msa0020290:CDS
TCATCATCCCACTTGTTTAC+TGG 0.244968 1_1:-35241995 Msa0020290:CDS
TACTACTTATATGACTATTA+TGG 0.245430 1_1:-35240196 Msa0020290:CDS
GTACTGATTAATGCATTAAT+AGG 0.246031 1_1:-35239819 Msa0020290:three_prime_UTR
AAGGCGATTGTAAGTGTTTC+AGG 0.253571 1_1:-35244841 Msa0020290:CDS
CTGATGAAGTGGAGAGAATT+TGG 0.254386 1_1:-35240560 Msa0020290:CDS
CAGGAGTGCTTCGTAATTCC+TGG 0.269398 1_1:+35240410 None:intergenic
CCAAAGCTTTGTTGGGGAAT+AGG 0.275744 1_1:+35240007 None:intergenic
GCCAGGCATTATGCCGCAGC+TGG 0.281810 1_1:-35240693 Msa0020290:CDS
TTGGTTGCCAAACCCTAATA+TGG 0.319838 1_1:-35242123 Msa0020290:CDS
ACGGATCAAGTTGCGCCAAC+TGG 0.333303 1_1:+35239980 None:intergenic
CTCGACAAGTGGGTTGAAAA+AGG 0.339148 1_1:-35244799 Msa0020290:CDS
ACTATTATTAGTTAGTTTGA+TGG 0.339773 1_1:-35239878 Msa0020290:three_prime_UTR
CAAGACAAAATATTCAAATT+CGG 0.341894 1_1:+35239841 None:intergenic
TTCAACAAAATGAGGGAGTT+AGG 0.346945 1_1:-35240957 Msa0020290:CDS
GAAGAGGCAATAAATAAATA+GGG 0.347021 1_1:-35245547 None:intergenic
CAAGGGCTTAATAACAATTC+AGG 0.347172 1_1:-35245231 Msa0020290:CDS
CCTTGCTGCAATTGAAGCTT+GGG 0.357826 1_1:-35240502 Msa0020290:CDS
CACTCCTGAAAATTTATATA+AGG 0.364562 1_1:-35240395 Msa0020290:CDS
CCCAGCTGCGGCATAATGCC+TGG 0.370665 1_1:+35240692 None:intergenic
GCCTTGCTGCAATTGAAGCT+TGG 0.373021 1_1:-35240503 Msa0020290:CDS
CTGGGCAGCCAAAGCTTTGT+TGG 0.373233 1_1:+35239999 None:intergenic
CGGCTATCTCCGTCTGCATC+TGG 0.376773 1_1:+35244967 None:intergenic
CCATCTAACACGGGCAGCTT+TGG 0.383418 1_1:-35240715 Msa0020290:CDS
CTTCGCCTTTATGCAATTCT+GGG 0.384775 1_1:-35240588 Msa0020290:CDS
TGGCGCAACTTGATCCGTTT+AGG 0.388967 1_1:-35239975 Msa0020290:CDS
TTGTTCCCCATATTAGGGTT+TGG 0.390444 1_1:+35242116 None:intergenic
AACGCCAAACTACCGGCATA+TGG 0.392768 1_1:-35240057 Msa0020290:CDS
ACTAGCTAACTGTGCTAGTC+TGG 0.392913 1_1:-35241006 Msa0020290:CDS
AGAAAATCTTCTCTGCGTTA+TGG 0.396626 1_1:+35240148 None:intergenic
TTGCAAGCAAATGCTGTAAC+AGG 0.398542 1_1:+35240930 None:intergenic
TGGGCAGCCAAAGCTTTGTT+GGG 0.398974 1_1:+35240000 None:intergenic
CTGAATTGTTATTAAGCCCT+TGG 0.401030 1_1:+35245232 None:intergenic
GATCCCATATGCCGGTAGTT+TGG 0.401653 1_1:+35240053 None:intergenic
AACTACCGGCATATGGGATC+AGG 0.402981 1_1:-35240050 Msa0020290:CDS
ACAGCCTCCTCTGAAGTGTT+TGG 0.409253 1_1:+35245177 None:intergenic
TGTATGATTTGATGAGAATC+AGG 0.410014 1_1:+35245147 None:intergenic
CAATCAAGCAAATCAGAAAC+TGG 0.410076 1_1:+35239946 None:intergenic
AGCTGACGTGTTACTTATGA+TGG 0.410774 1_1:-35240865 Msa0020290:CDS
CCAGTGGGCAATGGCACAAT+AGG 0.411936 1_1:+35242069 None:intergenic
GCATAAAGGCGAAGCAAAGT+TGG 0.422948 1_1:+35240597 None:intergenic
CAAAGCTTTGGCTGCCCAGT+TGG 0.424772 1_1:-35239995 Msa0020290:CDS
CGAAGAGCCCACATACTTGT+TGG 0.429511 1_1:+35245433 None:intergenic
GGAGATAGTAGATGCACAAT+AGG 0.432935 1_1:-35240330 Msa0020290:CDS
CAGCACAGAGGTGGGGCAGT+AGG 0.433852 1_1:+35242039 None:intergenic
GAATTAAGCAGGCAAGAGAT+TGG 0.439041 1_1:-35244772 Msa0020290:CDS
ATGGGGTTCATTTGTTGAGT+AGG 0.439831 1_1:-35239784 Msa0020290:three_prime_UTR
CCTATTCCCCAACAAAGCTT+TGG 0.442635 1_1:-35240007 Msa0020290:CDS
GTTTCTGATTTGCTTGATTG+AGG 0.445276 1_1:-35239943 Msa0020290:exon
GTGTCTCTTTATGTTCAAGC+AGG 0.447381 1_1:-35240285 Msa0020290:CDS
AATTAAGCAGGCAAGAGATT+GGG 0.449212 1_1:-35244771 Msa0020290:CDS
CCTTTATGCAATTCTGGGTA+GGG 0.456352 1_1:-35240583 Msa0020290:CDS
ATTGAGTGGTCATTGGAGGT+TGG 0.458920 1_1:-35242142 Msa0020290:CDS
AAAACTTGAAAGAGAATATG+TGG 0.460609 1_1:-35240626 Msa0020290:CDS
TCTGGAAAATTTGAGGAAAA+CGG 0.461036 1_1:-35240988 Msa0020290:CDS
CCCTACCCAGAATTGCATAA+AGG 0.464815 1_1:+35240583 None:intergenic
CGTGTTACTTATGATGGAAA+AGG 0.465313 1_1:-35240859 Msa0020290:CDS
AAGACAAAATATTCAAATTC+GGG 0.468706 1_1:+35239842 None:intergenic
CCAAAGCTGCCCGTGTTAGA+TGG 0.472568 1_1:+35240715 None:intergenic
GTGCTAGTCTGGAAAATTTG+AGG 0.473927 1_1:-35240995 Msa0020290:CDS
GCACAATAGGTCCAACAACC+TGG 0.473985 1_1:-35240317 Msa0020290:CDS
CATCAATGAGCTGGAGTTGT+CGG 0.474367 1_1:-35244926 Msa0020290:CDS
CTCTGTGACCAACAAGTATG+TGG 0.476432 1_1:-35245441 Msa0020290:exon
TGAGTCAAAGCCACGGGTTG+AGG 0.476716 1_1:-35240529 Msa0020290:CDS
CATGATGCTTTGTATAATGC+AGG 0.476997 1_1:+35242175 None:intergenic
GGCAGTAGGGTTTCGTCCAG+TGG 0.477242 1_1:+35242053 None:intergenic
TGGTTGCCAAACCCTAATAT+GGG 0.479849 1_1:-35242122 Msa0020290:CDS
AAGGATCTTATTAAGACAAT+GGG 0.483656 1_1:-35240351 Msa0020290:CDS
GTCAAATAAATGGAAACTTA+CGG 0.484212 1_1:-35240433 Msa0020290:CDS
ATTTGATGAGAATCAGGAAC+AGG 0.485096 1_1:+35245153 None:intergenic
GAAGGCAGAAGGTTGTGAAC+TGG 0.485896 1_1:-35240739 Msa0020290:CDS
GCCTTTATGCAATTCTGGGT+AGG 0.486972 1_1:-35240584 Msa0020290:CDS
CATAAAGGCGAAGCAAAGTT+GGG 0.488820 1_1:+35240598 None:intergenic
GAAAATCACCAGTAAACAAG+TGG 0.489342 1_1:+35241987 None:intergenic
TGGGATGATGAAAAGAAGTT+TGG 0.489738 1_1:+35242007 None:intergenic
CATTTGAAAAGTTGAAGCAC+AGG 0.492401 1_1:+35239903 None:intergenic
CCAGGCATTATGCCGCAGCT+GGG 0.492421 1_1:-35240692 Msa0020290:CDS
AATAGGGGTATAAGAGCAGA+AGG 0.497459 1_1:-35245531 Msa0020290:five_prime_UTR
TTTGATTGAGTGGTCATTGG+AGG 0.498683 1_1:-35242146 Msa0020290:CDS
CCTATTGTGCCATTGCCCAC+TGG 0.500481 1_1:-35242069 Msa0020290:CDS
CATGTTCCAAATTCTTTCAG+AGG 0.502733 1_1:-35241050 Msa0020290:CDS
CATAAGCCTGTGCTAGAGCA+TGG 0.503113 1_1:+35240082 None:intergenic
ACGCCAAACTACCGGCATAT+GGG 0.503470 1_1:-35240056 Msa0020290:CDS
GGAATGTCTAATGATATTGA+TGG 0.505590 1_1:-35240786 Msa0020290:CDS
CTTCGGTTCGCCTCACCCTA+AGG 0.511576 1_1:-35245405 Msa0020290:intron
AGGAAACATTCAACAAAATG+AGG 0.512047 1_1:-35240965 Msa0020290:CDS
CGGATCAAGTTGCGCCAACT+GGG 0.512477 1_1:+35239981 None:intergenic
GCAGTAGGGTTTCGTCCAGT+GGG 0.518728 1_1:+35242054 None:intergenic
AAGAGACACAAGTGCATCCC+AGG 0.520884 1_1:+35240299 None:intergenic
TAACACGGGCAGCTTTGGCC+AGG 0.523289 1_1:-35240710 Msa0020290:CDS
TGGAACTGTAGGCCTTGGAT+TGG 0.526771 1_1:-35241178 Msa0020290:intron
CGGCATATGGGATCAGGGAG+AGG 0.529325 1_1:-35240044 Msa0020290:CDS
TAAGATGCTAAACAAGGGTA+AGG 0.531142 1_1:-35240370 Msa0020290:CDS
AGCACAGAGGTGGGGCAGTA+GGG 0.531857 1_1:+35242040 None:intergenic
GAGACGTTCAGAACTATTCA+AGG 0.532469 1_1:-35244860 Msa0020290:CDS
AAGTTAGACGAGAGAGAGAG+TGG 0.537011 1_1:+35241832 None:intergenic
GTGGGCTCTTCGCAGAACTT+CGG 0.539150 1_1:-35245422 Msa0020290:CDS
TCCGTTCCATGCTCTAGCAC+AGG 0.542493 1_1:-35240088 Msa0020290:CDS
TGAAAGTTCAGCACAGAGGT+GGG 0.544872 1_1:+35242031 None:intergenic
TGGAATTAATTTGACAGAAG+CGG 0.547793 1_1:+35245197 None:intergenic
TAAGGATCTTATTAAGACAA+TGG 0.550207 1_1:-35240352 Msa0020290:CDS
TCTGGGTAGGGCTGATGAAG+TGG 0.551487 1_1:-35240571 Msa0020290:CDS
TTATGAAAACGCCAAACTAC+CGG 0.552463 1_1:-35240064 Msa0020290:CDS
ATAAATGGAAACTTACGGCC+AGG 0.554195 1_1:-35240428 Msa0020290:CDS
TATGAATTTGTAGAAACCAA+GGG 0.554373 1_1:-35245248 Msa0020290:intron
CACCCGTGAACTTTCCTCAC+AGG 0.554630 1_1:-35245064 Msa0020290:CDS
GTTTGACTCTAGCCAATCCA+AGG 0.556722 1_1:+35241166 None:intergenic
GGCAATGGCACAATAGGAAG+AGG 0.558271 1_1:+35242075 None:intergenic
TGAAGTGGAGAGAATTTGGA+AGG 0.561253 1_1:-35240556 Msa0020290:CDS
TATGGAGCAGTATGCAAAGA+GGG 0.562326 1_1:-35240178 Msa0020290:CDS
TCAAGCAGGGGAAGTCGAAA+AGG 0.563985 1_1:-35240271 Msa0020290:CDS
CTGAAAGTTCAGCACAGAGG+TGG 0.564798 1_1:+35242030 None:intergenic
CTCTCCCTGATCCCATATGC+CGG 0.566853 1_1:+35240045 None:intergenic
GAAGAAAATTGAAGAAGCAG+AGG 0.567623 1_1:-35240472 Msa0020290:CDS
GTTGAGACAATGAAGGCAGA+AGG 0.568075 1_1:-35240750 Msa0020290:CDS
CAGCCTGTGAGGAAAGTTCA+CGG 0.570106 1_1:+35245061 None:intergenic
ACAAGTGCATCCCAGGTTGT+TGG 0.573061 1_1:+35240306 None:intergenic
TGTCTCTTTATGTTCAAGCA+GGG 0.574299 1_1:-35240284 Msa0020290:CDS
TTATGAATTTGTAGAAACCA+AGG 0.576721 1_1:-35245249 Msa0020290:intron
TCAAATTGTTGAGACAATGA+AGG 0.580306 1_1:-35240757 Msa0020290:CDS
GTCATATAAGTAGTAAACAT+TGG 0.580593 1_1:+35240204 None:intergenic
AAGAGGCAATAAATAAATAG+GGG 0.581614 1_1:-35245546 None:intergenic
TAGGAAGAGGAAGAGTAAAG+TGG 0.581921 1_1:+35242088 None:intergenic
GGGTTTCGTCCAGTGGGCAA+TGG 0.584432 1_1:+35242060 None:intergenic
ATTAATTCCAAACACTTCAG+AGG 0.585281 1_1:-35245184 Msa0020290:CDS
TTGATACTGCTCTCGACAAG+TGG 0.586005 1_1:-35244810 Msa0020290:CDS
TGAAATAGACATCAATGAGC+TGG 0.586036 1_1:-35244935 Msa0020290:CDS
TGGCATTGAATAGTCTTCGA+AGG 0.593800 1_1:-35244747 Msa0020290:CDS
GGTTTGTGAGTCAAAGCCAC+GGG 0.594479 1_1:-35240535 Msa0020290:CDS
AGCCTGTGAGGAAAGTTCAC+GGG 0.596801 1_1:+35245062 None:intergenic
TGTCTATTTCAGCAGTGTCA+CGG 0.599022 1_1:+35244947 None:intergenic
TGCGGATGGTCGTGATGACA+TGG 0.599629 1_1:-35245013 Msa0020290:CDS
CAAATTGCGTGGCCTACCAA+AGG 0.601950 1_1:-35241090 Msa0020290:CDS
AAGGCATAAGATGCTAAACA+AGG 0.601987 1_1:-35240376 Msa0020290:CDS
CACAATAGGTCCAACAACCT+GGG 0.602444 1_1:-35240316 Msa0020290:CDS
AGCATGAGGTATGTGGCGGT+AGG 0.608206 1_1:+35245107 None:intergenic
GGAAACATTCAACAAAATGA+GGG 0.611621 1_1:-35240964 Msa0020290:CDS
CCCAAGCTTCAATTGCAGCA+AGG 0.612921 1_1:+35240502 None:intergenic
ACTACCGGCATATGGGATCA+GGG 0.615630 1_1:-35240049 Msa0020290:CDS
AAGCAGGCAAGAGATTGGGT+TGG 0.616311 1_1:-35244767 Msa0020290:CDS
GTGAACTGGACCATCTAACA+CGG 0.617105 1_1:-35240725 Msa0020290:CDS
AATTCCAAACACTTCAGAGG+AGG 0.617941 1_1:-35245181 Msa0020290:CDS
CTTGCTGCAATTGAAGCTTG+GGG 0.618565 1_1:-35240501 Msa0020290:CDS
GAAAGTTCAGCACAGAGGTG+GGG 0.620144 1_1:+35242032 None:intergenic
AAACTTGAAAGAGAATATGT+GGG 0.621557 1_1:-35240625 Msa0020290:CDS
GCCTGTGCTAGAGCATGGAA+CGG 0.627437 1_1:+35240087 None:intergenic
TTGACTGAGCCAGATGCAGA+CGG 0.627744 1_1:-35244976 Msa0020290:CDS
AGGTTTGTGAGTCAAAGCCA+CGG 0.627828 1_1:-35240536 Msa0020290:CDS
GGGTGGTGAGAGTAAATCTG+TGG 0.628134 1_1:+35245082 None:intergenic
AGATTGATAACCTTAGGGTG+AGG 0.631430 1_1:+35245395 None:intergenic
GCAAGGCAGTCCTCAACCCG+TGG 0.631837 1_1:+35240519 None:intergenic
GAATGTCTAATGATATTGAT+GGG 0.632015 1_1:-35240785 Msa0020290:CDS
ATGATGCTTTGTATAATGCA+GGG 0.632218 1_1:+35242176 None:intergenic
GCTGTATTGAAGGAGATTGA+AGG 0.637752 1_1:-35240651 Msa0020290:CDS
GATTTGATTGCCAAATTGCG+TGG 0.637784 1_1:-35241101 Msa0020290:CDS
GTCTCTTTATGTTCAAGCAG+GGG 0.638136 1_1:-35240283 Msa0020290:CDS
TCTGTGACCAACAAGTATGT+GGG 0.644471 1_1:-35245440 Msa0020290:exon
GGGCAGCCAAAGCTTTGTTG+GGG 0.644851 1_1:+35240001 None:intergenic
TGTGGGAAGCATGAGGTATG+TGG 0.646414 1_1:+35245100 None:intergenic
AGTTAGACGAGAGAGAGAGT+GGG 0.648262 1_1:+35241833 None:intergenic
TGATACTGCTCTCGACAAGT+GGG 0.651981 1_1:-35244809 Msa0020290:CDS
AGGCATAAGATGCTAAACAA+GGG 0.655332 1_1:-35240375 Msa0020290:CDS
GCTGCTAGCATCAGCCTGTG+AGG 0.664179 1_1:+35245050 None:intergenic
CTGTGAGGAAAGTTCACGGG+TGG 0.665610 1_1:+35245065 None:intergenic
GGTGGTGAGAGTAAATCTGT+GGG 0.666364 1_1:+35245083 None:intergenic
GTAAATCTGTGGGAAGCATG+AGG 0.666890 1_1:+35245093 None:intergenic
GGAAAATTTGAGGAAAACGG+AGG 0.667007 1_1:-35240985 Msa0020290:CDS
GGTTGCCAAACCCTAATATG+GGG 0.671697 1_1:-35242121 Msa0020290:CDS
AAGAATTTGGAACATGCTCG+AGG 0.672014 1_1:+35241057 None:intergenic
AAAATCACCAGTAAACAAGT+GGG 0.673820 1_1:+35241988 None:intergenic
ATAGGGGTATAAGAGCAGAA+GGG 0.677158 1_1:-35245530 Msa0020290:five_prime_UTR
TTATGGAGCAGTATGCAAAG+AGG 0.687746 1_1:-35240179 Msa0020290:CDS
TGAACTGGACCATCTAACAC+GGG 0.691549 1_1:-35240724 Msa0020290:CDS
ATGGAGCAGTATGCAAAGAG+GGG 0.702068 1_1:-35240177 Msa0020290:CDS
TGGCTGAAAGTTCAGCACAG+AGG 0.724982 1_1:+35242027 None:intergenic
ATGCTTTGTATAATGCAGGG+AGG 0.760864 1_1:+35242179 None:intergenic
GGGAAGCATGAGGTATGTGG+CGG 0.767871 1_1:+35245103 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAATTTTAGACTTAATA+TGG - chr1_1:35241752-35241771 Msa0020290:intron 10.0%
!!! TATAATTTTAGACTTAATAT+GGG - chr1_1:35241753-35241772 Msa0020290:intron 10.0%
!! AAAATTAAAACATCATATTA+TGG + chr1_1:35244060-35244079 None:intergenic 10.0%
!! ATGAAATAATAAATGAGTAA+GGG + chr1_1:35240754-35240773 None:intergenic 15.0%
!! AATGAAATAATAAATGAGTA+AGG + chr1_1:35240755-35240774 None:intergenic 15.0%
!! TAAAAAATAAAGATTGTTGA+TGG + chr1_1:35242202-35242221 None:intergenic 15.0%
!!! ATTTTTCATTGTATTATTGT+TGG - chr1_1:35242997-35243016 Msa0020290:intron 15.0%
!!! TTTTATCTTTTTTCTTTCTT+TGG - chr1_1:35244090-35244109 Msa0020290:intron 15.0%
!!! CACTTTTTTTTTTTTAGAAA+TGG + chr1_1:35245542-35245561 None:intergenic 15.0%
!!! CATTTCTAAAAAAAAAAAAG+TGG - chr1_1:35245540-35245559 Msa0020290:five_prime_UTR 15.0%
!!! TTGATTTTATTATTTGATCC+CGG - chr1_1:35239967-35239986 Msa0020290:CDS 20.0%
!! AATAGTGAAAATGATTAAAC+CGG + chr1_1:35239989-35240008 None:intergenic 20.0%
!! TATGTGTAATTTCTTCAAAA+TGG + chr1_1:35240673-35240692 None:intergenic 20.0%
!! ACAACATTTATTTGATTCTT+TGG + chr1_1:35240696-35240715 None:intergenic 20.0%
!! TTCAATGCAACATTAATTAT+TGG + chr1_1:35240859-35240878 None:intergenic 20.0%
!! AACAAAATAATTCTCCAAAA+TGG - chr1_1:35240897-35240916 Msa0020290:CDS 20.0%
!! ATGTTACAATATAGAAAAGA+TGG - chr1_1:35240959-35240978 Msa0020290:CDS 20.0%
!! ATATCCAAACAATATAAGAT+GGG + chr1_1:35240991-35241010 None:intergenic 20.0%
!!! AATGATAGTTCAACTTTTAT+AGG - chr1_1:35241067-35241086 Msa0020290:CDS 20.0%
!!! AATATAATTTGTCTATTTGC+TGG - chr1_1:35241600-35241619 Msa0020290:intron 20.0%
!!! ATATAATTTGTCTATTTGCT+GGG - chr1_1:35241601-35241620 Msa0020290:intron 20.0%
!! AAAAATCGTAAATCATGAAT+CGG + chr1_1:35241644-35241663 None:intergenic 20.0%
!! AAATATCTCCTAAATTATGA+TGG + chr1_1:35241719-35241738 None:intergenic 20.0%
!! TTTATCAAATGACTTCATAA+TGG + chr1_1:35241784-35241803 None:intergenic 20.0%
!! TGTTATTGTATTTATGATGA+TGG - chr1_1:35241838-35241857 Msa0020290:CDS 20.0%
!! TATATAAACACTAAACCATT+AGG + chr1_1:35241877-35241896 None:intergenic 20.0%
!!! TATTTTGTTTGTTTCTAAGT+AGG + chr1_1:35242108-35242127 None:intergenic 20.0%
!!! TACAGTTTTTTTAAATACGT+GGG + chr1_1:35242325-35242344 None:intergenic 20.0%
!!! TTACAGTTTTTTTAAATACG+TGG + chr1_1:35242326-35242345 None:intergenic 20.0%
!!! TTTGTTTTTTGTTTGTTTGA+TGG - chr1_1:35242373-35242392 Msa0020290:intron 20.0%
!!! TTGTTTTTTGTTTGTTTGAT+GGG - chr1_1:35242374-35242393 Msa0020290:intron 20.0%
!! CATAACATTCTTTCAAAATA+TGG - chr1_1:35242664-35242683 Msa0020290:intron 20.0%
!!! AAACTTTGATAATGGAAAAA+TGG + chr1_1:35243780-35243799 None:intergenic 20.0%
!!! TTTTTCCATTATCAAAGTTT+TGG - chr1_1:35243780-35243799 Msa0020290:intron 20.0%
!!! TTTTCCATTATCAAAGTTTT+GGG - chr1_1:35243781-35243800 Msa0020290:intron 20.0%
!!! TGAAGTGTCAATAAAATAAT+TGG + chr1_1:35243840-35243859 None:intergenic 20.0%
!!! ATTTTGTAAGTATAAGAAGA+AGG + chr1_1:35244470-35244489 None:intergenic 20.0%
!!! AAAATTTTAATAGACGTGAA+GGG - chr1_1:35244485-35244504 Msa0020290:intron 20.0%
!!! TATGCCTTATATAAATTTTC+AGG + chr1_1:35244904-35244923 None:intergenic 20.0%
!! TACTACTTATATGACTATTA+TGG - chr1_1:35245096-35245115 Msa0020290:CDS 20.0%
!!! ACTATTATTAGTTAGTTTGA+TGG - chr1_1:35245414-35245433 Msa0020290:CDS 20.0%
!! AAGACAAAATATTCAAATTC+GGG + chr1_1:35245453-35245472 None:intergenic 20.0%
!! CAAGACAAAATATTCAAATT+CGG + chr1_1:35245454-35245473 None:intergenic 20.0%
!!! TAATAGGTTTTATGATTTCA+TGG - chr1_1:35245489-35245508 Msa0020290:five_prime_UTR 20.0%
!!! AATAGGTTTTATGATTTCAT+GGG - chr1_1:35245490-35245509 Msa0020290:five_prime_UTR 20.0%
! ATAGTGAAAATGATTAAACC+GGG + chr1_1:35239988-35240007 None:intergenic 25.0%
! TTATGAATTTGTAGAAACCA+AGG - chr1_1:35240043-35240062 Msa0020290:CDS 25.0%
! TATGAATTTGTAGAAACCAA+GGG - chr1_1:35240044-35240063 Msa0020290:CDS 25.0%
! ACAAAAAATCACTTTCTACA+AGG - chr1_1:35240410-35240429 Msa0020290:CDS 25.0%
! AAAAAGGTAAAGAATTAAGC+AGG - chr1_1:35240509-35240528 Msa0020290:CDS 25.0%
!! AATGGATAAGTATTGTGAAA+TGG + chr1_1:35240655-35240674 None:intergenic 25.0%
! CATATCCAAACAATATAAGA+TGG + chr1_1:35240992-35241011 None:intergenic 25.0%
! TTATATTGTTTGGATATGTG+TGG - chr1_1:35240994-35241013 Msa0020290:CDS 25.0%
! TTTATAGGTAGAGGAAAATT+AGG - chr1_1:35241082-35241101 Msa0020290:CDS 25.0%
!!! TTTTTAGGGTTTTTTGCTAT+CGG + chr1_1:35241281-35241300 None:intergenic 25.0%
!! ACATGATATAATCCTTTTAG+TGG + chr1_1:35241329-35241348 None:intergenic 25.0%
!!! TTGAATGTTTTAAAGGAAAG+TGG + chr1_1:35241369-35241388 None:intergenic 25.0%
!!! TGCTTCTTTGAATGTTTTAA+AGG + chr1_1:35241376-35241395 None:intergenic 25.0%
!!! TCTCGTTCTTTTTTCTTTTT+TGG - chr1_1:35241445-35241464 Msa0020290:intron 25.0%
! GATCGAAATAAAAGATAACA+AGG + chr1_1:35241510-35241529 None:intergenic 25.0%
! TATACCAAACAATCTTAAGT+GGG - chr1_1:35241665-35241684 Msa0020290:intron 25.0%
!! TTTTAGACTTAATATGGGAT+AGG - chr1_1:35241758-35241777 Msa0020290:intron 25.0%
!! TTTTTCTACTAATGAGGAAT+TGG + chr1_1:35241966-35241985 None:intergenic 25.0%
! TTCCTCATTAGTAGAAAAAT+AGG - chr1_1:35241967-35241986 Msa0020290:intron 25.0%
!!! TTCCTATTTTTCTACTAATG+AGG + chr1_1:35241972-35241991 None:intergenic 25.0%
! AAAAATAGGAATGATTGTCA+CGG - chr1_1:35241981-35242000 Msa0020290:CDS 25.0%
!!! ATTGTTTTTTTTACCACAGT+AGG - chr1_1:35242004-35242023 Msa0020290:CDS 25.0%
!!! TTGTTTTTTTTACCACAGTA+GGG - chr1_1:35242005-35242024 Msa0020290:CDS 25.0%
!! GATTAGTTCTCAAATTTATC+TGG - chr1_1:35242029-35242048 Msa0020290:CDS 25.0%
!! AAAGATATTACCAGTTTTCT+TGG - chr1_1:35242072-35242091 Msa0020290:CDS 25.0%
!! AAGATATTACCAGTTTTCTT+GGG - chr1_1:35242073-35242092 Msa0020290:CDS 25.0%
!! ATCACAATTCACACTTATTT+TGG + chr1_1:35242135-35242154 None:intergenic 25.0%
! ATACATTGGATATACAACTT+GGG - chr1_1:35242240-35242259 Msa0020290:intron 25.0%
! TTGTACATATGTAGTATAAG+AGG + chr1_1:35242350-35242369 None:intergenic 25.0%
! TACTTCACTAAAGAAAACAT+GGG + chr1_1:35242875-35242894 None:intergenic 25.0%
! TTACTTCACTAAAGAAAACA+TGG + chr1_1:35242876-35242895 None:intergenic 25.0%
! CGATTCAATTATTATAGTGT+TGG - chr1_1:35242970-35242989 Msa0020290:intron 25.0%
! TATTCCCAAAACTTTGATAA+TGG + chr1_1:35243788-35243807 None:intergenic 25.0%
!! TGTAATAATGTGACATTTTG+TGG - chr1_1:35243812-35243831 Msa0020290:intron 25.0%
!! GTAATAATGTGACATTTTGT+GGG - chr1_1:35243813-35243832 Msa0020290:intron 25.0%
!! ACGTAAAATACTTCTAAAGA+AGG + chr1_1:35243986-35244005 None:intergenic 25.0%
!!! TTTTACCTTGTTTATGTTTC+TGG - chr1_1:35244032-35244051 Msa0020290:intron 25.0%
!!! ATCTTTTTTCTTTCTTTGGT+TGG - chr1_1:35244094-35244113 Msa0020290:intron 25.0%
!!! CAAAATTTTAATAGACGTGA+AGG - chr1_1:35244484-35244503 Msa0020290:intron 25.0%
! GAATGTCTAATGATATTGAT+GGG - chr1_1:35244507-35244526 Msa0020290:intron 25.0%
! AAAACTTGAAAGAGAATATG+TGG - chr1_1:35244666-35244685 Msa0020290:intron 25.0%
! AAACTTGAAAGAGAATATGT+GGG - chr1_1:35244667-35244686 Msa0020290:intron 25.0%
! TTGAGATGATGTCAAATAAA+TGG - chr1_1:35244849-35244868 Msa0020290:CDS 25.0%
! GTCAAATAAATGGAAACTTA+CGG - chr1_1:35244859-35244878 Msa0020290:CDS 25.0%
! CACTCCTGAAAATTTATATA+AGG - chr1_1:35244897-35244916 Msa0020290:CDS 25.0%
! TAAGGATCTTATTAAGACAA+TGG - chr1_1:35244940-35244959 Msa0020290:CDS 25.0%
! AAGGATCTTATTAAGACAAT+GGG - chr1_1:35244941-35244960 Msa0020290:CDS 25.0%
! GTCATATAAGTAGTAAACAT+TGG + chr1_1:35245091-35245110 None:intergenic 25.0%
!!! GTACTGATTAATGCATTAAT+AGG - chr1_1:35245473-35245492 Msa0020290:five_prime_UTR 25.0%
!!! ATAGGTTTTATGATTTCATG+GGG - chr1_1:35245491-35245510 Msa0020290:five_prime_UTR 25.0%
! GAATGAGATTGATAACCTTA+GGG + chr1_1:35239905-35239924 None:intergenic 30.0%
! AGAATGAGATTGATAACCTT+AGG + chr1_1:35239906-35239925 None:intergenic 30.0%
! TGGAATTAATTTGACAGAAG+CGG + chr1_1:35240098-35240117 None:intergenic 30.0%
ATTAATTCCAAACACTTCAG+AGG - chr1_1:35240108-35240127 Msa0020290:CDS 30.0%
TGTATGATTTGATGAGAATC+AGG + chr1_1:35240148-35240167 None:intergenic 30.0%
! GATAAGTATTGTGAAATGGA+GGG + chr1_1:35240651-35240670 None:intergenic 30.0%
TTTCTCTCTCTACAGTAAAT+AGG - chr1_1:35240814-35240833 Msa0020290:CDS 30.0%
TCTCTACAGTAAATAGGTAA+GGG - chr1_1:35240820-35240839 Msa0020290:CDS 30.0%
! TTCACAATACTTGTCCATTT+TGG + chr1_1:35240914-35240933 None:intergenic 30.0%
! AATGGACAAGTATTGTGAAA+CGG - chr1_1:35240915-35240934 Msa0020290:CDS 30.0%
! AGTTCAACTTTTATAGGTAG+AGG - chr1_1:35241073-35241092 Msa0020290:CDS 30.0%
AACACAGTTAATGGAGAAAA+AGG + chr1_1:35241153-35241172 None:intergenic 30.0%
! TTTTTCTCCATTAACTGTGT+TGG - chr1_1:35241152-35241171 Msa0020290:CDS 30.0%
!!! TTTTAGGGTTTTTTGCTATC+GGG + chr1_1:35241280-35241299 None:intergenic 30.0%
CAAAAAACCCTAAAAATGAG+TGG - chr1_1:35241285-35241304 Msa0020290:intron 30.0%
!! ATATAATCCTTTTAGTGGAC+CGG + chr1_1:35241324-35241343 None:intergenic 30.0%
CTATACCAAACAATCTTAAG+TGG - chr1_1:35241664-35241683 Msa0020290:intron 30.0%
TAAACACTAAACCATTAGGT+GGG + chr1_1:35241873-35241892 None:intergenic 30.0%
ATAAACACTAAACCATTAGG+TGG + chr1_1:35241874-35241893 None:intergenic 30.0%
TGTTTATATATGCAGCTATC+AGG - chr1_1:35241887-35241906 Msa0020290:intron 30.0%
! AGATATTACCAGTTTTCTTG+GGG - chr1_1:35242074-35242093 Msa0020290:CDS 30.0%
TATTCATGACTTTGCTTTAG+AGG + chr1_1:35242179-35242198 None:intergenic 30.0%
CATACATTGGATATACAACT+TGG - chr1_1:35242239-35242258 Msa0020290:intron 30.0%
!! ATAGCTATTTTCCAGCTTTA+GGG + chr1_1:35242627-35242646 None:intergenic 30.0%
!! AATAGCTATTTTCCAGCTTT+AGG + chr1_1:35242628-35242647 None:intergenic 30.0%
ATGATGCTTTGTATAATGCA+GGG + chr1_1:35243119-35243138 None:intergenic 30.0%
AAAATCACCAGTAAACAAGT+GGG + chr1_1:35243307-35243326 None:intergenic 30.0%
TTGGCTGAAAAAAAATACTG+GGG + chr1_1:35243336-35243355 None:intergenic 30.0%
CTTGGCTGAAAAAAAATACT+GGG + chr1_1:35243337-35243356 None:intergenic 30.0%
ACTTGGCTGAAAAAAAATAC+TGG + chr1_1:35243338-35243357 None:intergenic 30.0%
CTAACTATAGTTATTAACCC+CGG + chr1_1:35243718-35243737 None:intergenic 30.0%
AATAACTATAGTTAGGTCTC+AGG - chr1_1:35243723-35243742 Msa0020290:intron 30.0%
ATAACTATAGTTAGGTCTCA+GGG - chr1_1:35243724-35243743 Msa0020290:intron 30.0%
AAAATGGAGTGGGTAAAAAA+TGG + chr1_1:35243764-35243783 None:intergenic 30.0%
!! TGATAATGGAAAAATGGAGT+GGG + chr1_1:35243774-35243793 None:intergenic 30.0%
!! TTGATAATGGAAAAATGGAG+TGG + chr1_1:35243775-35243794 None:intergenic 30.0%
ACCCTTCAAAACTATAGTAA+TGG - chr1_1:35243862-35243881 Msa0020290:intron 30.0%
!!! CCCATTACTATAGTTTTGAA+GGG + chr1_1:35243866-35243885 None:intergenic 30.0%
CCCTTCAAAACTATAGTAAT+GGG - chr1_1:35243863-35243882 Msa0020290:intron 30.0%
CCTTCAAAACTATAGTAATG+GGG - chr1_1:35243864-35243883 Msa0020290:intron 30.0%
! AATTCTCCTCTGAAAGAATT+TGG + chr1_1:35244251-35244270 None:intergenic 30.0%
TCTGGAAAATTTGAGGAAAA+CGG - chr1_1:35244304-35244323 Msa0020290:intron 30.0%
AGGAAACATTCAACAAAATG+AGG - chr1_1:35244327-35244346 Msa0020290:intron 30.0%
GGAAACATTCAACAAAATGA+GGG - chr1_1:35244328-35244347 Msa0020290:intron 30.0%
GGAATGTCTAATGATATTGA+TGG - chr1_1:35244506-35244525 Msa0020290:intron 30.0%
TCAAATTGTTGAGACAATGA+AGG - chr1_1:35244535-35244554 Msa0020290:intron 30.0%
!!! CAATACAGCTTCAGTTTTTT+CGG + chr1_1:35244630-35244649 None:intergenic 30.0%
AAAAACTGAAGCTGTATTGA+AGG - chr1_1:35244631-35244650 Msa0020290:intron 30.0%
! TATAAGAGCAGAAGGGTTTT+TGG - chr1_1:35239769-35239788 Msa0020290:three_prime_UTR 35.0%
! ATAAGAGCAGAAGGGTTTTT+GGG - chr1_1:35239770-35239789 Msa0020290:three_prime_UTR 35.0%
! CTGAATTGTTATTAAGCCCT+TGG + chr1_1:35240063-35240082 None:intergenic 35.0%
CAAGGGCTTAATAACAATTC+AGG - chr1_1:35240061-35240080 Msa0020290:CDS 35.0%
ATTTGATGAGAATCAGGAAC+AGG + chr1_1:35240142-35240161 None:intergenic 35.0%
TGAAATAGACATCAATGAGC+TGG - chr1_1:35240357-35240376 Msa0020290:CDS 35.0%
AATTAAGCAGGCAAGAGATT+GGG - chr1_1:35240521-35240540 Msa0020290:CDS 35.0%
AAGGCGTAAAATGTATGGAA+GGG - chr1_1:35240564-35240583 Msa0020290:CDS 35.0%
! GGATAAGTATTGTGAAATGG+AGG + chr1_1:35240652-35240671 None:intergenic 35.0%
CTCTCTACAGTAAATAGGTA+AGG - chr1_1:35240819-35240838 Msa0020290:CDS 35.0%
GAGTCCCATCTTATATTGTT+TGG - chr1_1:35240984-35241003 Msa0020290:CDS 35.0%
AGGAAAATTAGGTCAAACCA+TGG - chr1_1:35241093-35241112 Msa0020290:CDS 35.0%
TAACGAGTACTTAACAACCA+TGG + chr1_1:35241113-35241132 None:intergenic 35.0%
! GTTAATGGAGAAAAAGGTGT+GGG + chr1_1:35241147-35241166 None:intergenic 35.0%
AGTTAATGGAGAAAAAGGTG+TGG + chr1_1:35241148-35241167 None:intergenic 35.0%
!! TATAATCCTTTTAGTGGACC+GGG + chr1_1:35241323-35241342 None:intergenic 35.0%
! TTAAAGGAAAGTGGACTTTC+CGG + chr1_1:35241360-35241379 None:intergenic 35.0%
AGATCCCACTTAAGATTGTT+TGG + chr1_1:35241672-35241691 None:intergenic 35.0%
ATCTCAAGTTTGACAACCAT+GGG - chr1_1:35241688-35241707 Msa0020290:intron 35.0%
AATTATGATGGTTTGACCCA+TGG + chr1_1:35241707-35241726 None:intergenic 35.0%
GGGTCAAACCATCATAATTT+AGG - chr1_1:35241708-35241727 Msa0020290:intron 35.0%
ATGAGCCAATCACACATAAT+TGG - chr1_1:35241803-35241822 Msa0020290:CDS 35.0%
AAACACTAAACCATTAGGTG+GGG + chr1_1:35241872-35241891 None:intergenic 35.0%
! TTTTGCAGTGAGTCATACAT+TGG - chr1_1:35242226-35242245 Msa0020290:intron 35.0%
CAGCAACTTAATGAGGTTTA+GGG + chr1_1:35242465-35242484 None:intergenic 35.0%
TCAGCAACTTAATGAGGTTT+AGG + chr1_1:35242466-35242485 None:intergenic 35.0%
TTCATAGAAGTTAACGAACG+TGG + chr1_1:35242562-35242581 None:intergenic 35.0%
TGAAATAACCTTGACAACCA+TGG - chr1_1:35242578-35242597 Msa0020290:intron 35.0%
!! TAGCTATTTTCCAGCTTTAG+GGG + chr1_1:35242626-35242645 None:intergenic 35.0%
TGAAAGAATGTTATGCAAGC+TGG + chr1_1:35242659-35242678 None:intergenic 35.0%
TTTATCTGCAAAAAGCTCGT+TGG + chr1_1:35242762-35242781 None:intergenic 35.0%
ATTCAGCAAGCTCATAATCT+GGG + chr1_1:35242797-35242816 None:intergenic 35.0%
AATTCAGCAAGCTCATAATC+TGG + chr1_1:35242798-35242817 None:intergenic 35.0%
TTATCATAGCACAGCTTCAT+AGG - chr1_1:35242834-35242853 Msa0020290:intron 35.0%
CATGATGCTTTGTATAATGC+AGG + chr1_1:35243120-35243139 None:intergenic 35.0%
!!! CATGTTGTGTTTTGATTGAG+TGG - chr1_1:35243136-35243155 Msa0020290:intron 35.0%
!!! TGTTTTGATTGAGTGGTCAT+TGG - chr1_1:35243143-35243162 Msa0020290:intron 35.0%
! AGCTTTTGTTCCCCATATTA+GGG + chr1_1:35243184-35243203 None:intergenic 35.0%
TGGGATGATGAAAAGAAGTT+TGG + chr1_1:35243288-35243307 None:intergenic 35.0%
GAAAATCACCAGTAAACAAG+TGG + chr1_1:35243308-35243327 None:intergenic 35.0%
GAAAGTCAAACAAGTGAACT+TGG + chr1_1:35243355-35243374 None:intergenic 35.0%
! TTTGACTTTCTTCAACGTGT+TGG - chr1_1:35243365-35243384 Msa0020290:intron 35.0%
! GATTCATGCATTTTCTCTGT+TGG - chr1_1:35243407-35243426 Msa0020290:intron 35.0%
!!! GAGCAGAGAATGAGTTTTTT+TGG + chr1_1:35243440-35243459 None:intergenic 35.0%
CTCGTGAGATCAAAATTTGT+TGG + chr1_1:35243547-35243566 None:intergenic 35.0%
GCTGCATAAAACAGTATGAA+TGG + chr1_1:35243571-35243590 None:intergenic 35.0%
TAAGTTGTACCCATATCCTT+TGG - chr1_1:35243630-35243649 Msa0020290:intron 35.0%
ACCCATATCCTTTGGTATAT+TGG - chr1_1:35243638-35243657 Msa0020290:intron 35.0%
GCCAATATACCAAAGGATAT+GGG + chr1_1:35243642-35243661 None:intergenic 35.0%
AACTTCAAAACTGCTACAAC+AGG + chr1_1:35243668-35243687 None:intergenic 35.0%
CGGGGTTAATAACTATAGTT+AGG - chr1_1:35243716-35243735 Msa0020290:intron 35.0%
!!! CCCCATTACTATAGTTTTGA+AGG + chr1_1:35243867-35243886 None:intergenic 35.0%
! TCAAAACTATAGTAATGGGG+AGG - chr1_1:35243867-35243886 Msa0020290:intron 35.0%
! ATAGTAATGGGGAGGAAAAA+TGG - chr1_1:35243875-35243894 Msa0020290:intron 35.0%
! GAATGGTTCGTTTCCTTTTT+GGG - chr1_1:35243929-35243948 Msa0020290:intron 35.0%
TGGAACCAGAAACATAAACA+AGG + chr1_1:35244040-35244059 None:intergenic 35.0%
CATGTTCCAAATTCTTTCAG+AGG - chr1_1:35244242-35244261 Msa0020290:intron 35.0%
TTCAACAAAATGAGGGAGTT+AGG - chr1_1:35244335-35244354 Msa0020290:intron 35.0%
!! CGTGTTACTTATGATGGAAA+AGG - chr1_1:35244433-35244452 Msa0020290:intron 35.0%
GAAGAAAATTGAAGAAGCAG+AGG - chr1_1:35244820-35244839 Msa0020290:CDS 35.0%
AAGGCATAAGATGCTAAACA+AGG - chr1_1:35244916-35244935 Msa0020290:CDS 35.0%
AGGCATAAGATGCTAAACAA+GGG - chr1_1:35244917-35244936 Msa0020290:CDS 35.0%
TAAGATGCTAAACAAGGGTA+AGG - chr1_1:35244922-35244941 Msa0020290:CDS 35.0%
TGTCTCTTTATGTTCAAGCA+GGG - chr1_1:35245008-35245027 Msa0020290:CDS 35.0%
AGAAAATCTTCTCTGCGTTA+TGG + chr1_1:35245147-35245166 None:intergenic 35.0%
TTATGAAAACGCCAAACTAC+CGG - chr1_1:35245228-35245247 Msa0020290:CDS 35.0%
! GAAACTGGAGTTTTCCTAAA+CGG + chr1_1:35245334-35245353 None:intergenic 35.0%
CAATCAAGCAAATCAGAAAC+TGG + chr1_1:35245349-35245368 None:intergenic 35.0%
!! GTTTCTGATTTGCTTGATTG+AGG - chr1_1:35245349-35245368 Msa0020290:intron 35.0%
CATTTGAAAAGTTGAAGCAC+AGG + chr1_1:35245392-35245411 None:intergenic 35.0%
! AATAGGGGTATAAGAGCAGA+AGG - chr1_1:35239761-35239780 Msa0020290:three_prime_UTR 40.0%
! ATAGGGGTATAAGAGCAGAA+GGG - chr1_1:35239762-35239781 Msa0020290:three_prime_UTR 40.0%
!!! AGGGTTTTTGGGTTTTGGTT+AGG - chr1_1:35239781-35239800 Msa0020290:three_prime_UTR 40.0%
!!! GGGTTTTTGGGTTTTGGTTA+GGG - chr1_1:35239782-35239801 Msa0020290:three_prime_UTR 40.0%
TCTGTGACCAACAAGTATGT+GGG - chr1_1:35239852-35239871 Msa0020290:three_prime_UTR 40.0%
! AGATTGATAACCTTAGGGTG+AGG + chr1_1:35239900-35239919 None:intergenic 40.0%
AATTCCAAACACTTCAGAGG+AGG - chr1_1:35240111-35240130 Msa0020290:CDS 40.0%
TGTCTATTTCAGCAGTGTCA+CGG + chr1_1:35240348-35240367 None:intergenic 40.0%
GAGACGTTCAGAACTATTCA+AGG - chr1_1:35240432-35240451 Msa0020290:CDS 40.0%
AAGGCGATTGTAAGTGTTTC+AGG - chr1_1:35240451-35240470 Msa0020290:CDS 40.0%
GAATTAAGCAGGCAAGAGAT+TGG - chr1_1:35240520-35240539 Msa0020290:CDS 40.0%
! TGGCATTGAATAGTCTTCGA+AGG - chr1_1:35240545-35240564 Msa0020290:CDS 40.0%
! CTTCGAAGGCGTAAAATGTA+TGG - chr1_1:35240559-35240578 Msa0020290:CDS 40.0%
! GAAGGCGTAAAATGTATGGA+AGG - chr1_1:35240563-35240582 Msa0020290:CDS 40.0%
! GACAAGTATTGTGAAACGGA+GGG - chr1_1:35240919-35240938 Msa0020290:CDS 40.0%
GTTTGGATATGTGTGGAGAT+TGG - chr1_1:35241001-35241020 Msa0020290:CDS 40.0%
ATATGTGTGGAGATTGGAGA+AGG - chr1_1:35241007-35241026 Msa0020290:CDS 40.0%
AAACCCTAAAAATGAGTGGC+AGG - chr1_1:35241289-35241308 Msa0020290:intron 40.0%
TTATATCATGTGACCCGATC+CGG - chr1_1:35241338-35241357 Msa0020290:intron 40.0%
GATCTCAAGTTTGACAACCA+TGG - chr1_1:35241687-35241706 Msa0020290:intron 40.0%
CTCTGCCAATTATGTGTGAT+TGG + chr1_1:35241811-35241830 None:intergenic 40.0%
ACACATAATTGGCAGAGCAA+TGG - chr1_1:35241814-35241833 Msa0020290:CDS 40.0%
! TATCTCTCATTGACTGCTCA+GGG + chr1_1:35242442-35242461 None:intergenic 40.0%
CCATGTTCAGCAACTTAATG+AGG + chr1_1:35242472-35242491 None:intergenic 40.0%
! CCTCATTAAGTTGCTGAACA+TGG - chr1_1:35242469-35242488 Msa0020290:intron 40.0%
AACATGGCCAAATAGGTTCT+TGG - chr1_1:35242485-35242504 Msa0020290:intron 40.0%
ATAGAAGTTAACGAACGTGG+AGG + chr1_1:35242559-35242578 None:intergenic 40.0%
TGGAAATAGAGTCACATCCA+TGG + chr1_1:35242598-35242617 None:intergenic 40.0%
! ATATGGACTGCTCAATCCTT+TGG - chr1_1:35242681-35242700 Msa0020290:intron 40.0%
CTTGCAGACATTCTTACCAA+AGG + chr1_1:35242700-35242719 None:intergenic 40.0%
TGGTAAGAATGTCTGCAAGT+TGG - chr1_1:35242701-35242720 Msa0020290:intron 40.0%
TACTCGTATGTACCTTCACA+AGG + chr1_1:35242727-35242746 None:intergenic 40.0%
!! AAAGAAAACATGGGCTGGAA+TGG + chr1_1:35242866-35242885 None:intergenic 40.0%
TCACTAAAGAAAACATGGGC+TGG + chr1_1:35242871-35242890 None:intergenic 40.0%
ACATTACCTGTCATGCTTTC+AGG - chr1_1:35243088-35243107 Msa0020290:intron 40.0%
CATTACCTGTCATGCTTTCA+GGG - chr1_1:35243089-35243108 Msa0020290:intron 40.0%
ATTACCTGTCATGCTTTCAG+GGG - chr1_1:35243090-35243109 Msa0020290:intron 40.0%
ATGCTTTGTATAATGCAGGG+AGG + chr1_1:35243116-35243135 None:intergenic 40.0%
TTTGATTGAGTGGTCATTGG+AGG - chr1_1:35243146-35243165 Msa0020290:intron 40.0%
TTGGTTGCCAAACCCTAATA+TGG - chr1_1:35243169-35243188 Msa0020290:intron 40.0%
TGGTTGCCAAACCCTAATAT+GGG - chr1_1:35243170-35243189 Msa0020290:intron 40.0%
TTGTTCCCCATATTAGGGTT+TGG + chr1_1:35243179-35243198 None:intergenic 40.0%
! GAGCTTTTGTTCCCCATATT+AGG + chr1_1:35243185-35243204 None:intergenic 40.0%
TAGGAAGAGGAAGAGTAAAG+TGG + chr1_1:35243207-35243226 None:intergenic 40.0%
TCATCATCCCACTTGTTTAC+TGG - chr1_1:35243297-35243316 Msa0020290:intron 40.0%
GAAAAAAAATACTGGGGCTC+TGG + chr1_1:35243330-35243349 None:intergenic 40.0%
! TGTTGGTTGCTTATCACTCT+CGG - chr1_1:35243382-35243401 Msa0020290:intron 40.0%
TGGGTACAACTTACAACACA+AGG + chr1_1:35243623-35243642 None:intergenic 40.0%
GGCCAATATACCAAAGGATA+TGG + chr1_1:35243643-35243662 None:intergenic 40.0%
TCAAAACTGCTACAACAGGA+TGG + chr1_1:35243664-35243683 None:intergenic 40.0%
!!! TGTAGCAGTTTTGAAGTTGC+CGG - chr1_1:35243670-35243689 Msa0020290:intron 40.0%
! GGAATGGTTCGTTTCCTTTT+TGG - chr1_1:35243928-35243947 Msa0020290:intron 40.0%
CCTGCAATATATGCCCAAAA+AGG + chr1_1:35243945-35243964 None:intergenic 40.0%
!! CCTTTTTGGGCATATATTGC+AGG - chr1_1:35243942-35243961 Msa0020290:intron 40.0%
CTTTCTTTGGTTGGAACTGT+AGG - chr1_1:35244103-35244122 Msa0020290:intron 40.0%
GATTTGATTGCCAAATTGCG+TGG - chr1_1:35244191-35244210 Msa0020290:intron 40.0%
! GGTATTTTTCTGCCTTTGGT+AGG + chr1_1:35244217-35244236 None:intergenic 40.0%
!! TCGAGGTATTTTTCTGCCTT+TGG + chr1_1:35244221-35244240 None:intergenic 40.0%
! AAGAATTTGGAACATGCTCG+AGG + chr1_1:35244238-35244257 None:intergenic 40.0%
! GTGCTAGTCTGGAAAATTTG+AGG - chr1_1:35244297-35244316 Msa0020290:intron 40.0%
GGAAAATTTGAGGAAAACGG+AGG - chr1_1:35244307-35244326 Msa0020290:intron 40.0%
TTGCAAGCAAATGCTGTAAC+AGG + chr1_1:35244365-35244384 None:intergenic 40.0%
!! AGCTGACGTGTTACTTATGA+TGG - chr1_1:35244427-35244446 Msa0020290:intron 40.0%
GCTGTATTGAAGGAGATTGA+AGG - chr1_1:35244641-35244660 Msa0020290:intron 40.0%
CATAAAGGCGAAGCAAAGTT+GGG + chr1_1:35244697-35244716 None:intergenic 40.0%
CTTCGCCTTTATGCAATTCT+GGG - chr1_1:35244704-35244723 Msa0020290:intron 40.0%
CCTTTATGCAATTCTGGGTA+GGG - chr1_1:35244709-35244728 Msa0020290:intron 40.0%
ATAAATGGAAACTTACGGCC+AGG - chr1_1:35244864-35244883 Msa0020290:CDS 40.0%
GGAGATAGTAGATGCACAAT+AGG - chr1_1:35244962-35244981 Msa0020290:CDS 40.0%
GTGTCTCTTTATGTTCAAGC+AGG - chr1_1:35245007-35245026 Msa0020290:CDS 40.0%
GTCTCTTTATGTTCAAGCAG+GGG - chr1_1:35245009-35245028 Msa0020290:CDS 40.0%
TTATGGAGCAGTATGCAAAG+AGG - chr1_1:35245113-35245132 Msa0020290:CDS 40.0%
TATGGAGCAGTATGCAAAGA+GGG - chr1_1:35245114-35245133 Msa0020290:CDS 40.0%
! ATGGGGTTCATTTGTTGAGT+AGG - chr1_1:35245508-35245527 Msa0020290:five_prime_UTR 40.0%
!!! GCAGAAGGGTTTTTGGGTTT+TGG - chr1_1:35239776-35239795 Msa0020290:three_prime_UTR 45.0%
CTCTGTGACCAACAAGTATG+TGG - chr1_1:35239851-35239870 Msa0020290:three_prime_UTR 45.0%
! GTAAATCTGTGGGAAGCATG+AGG + chr1_1:35240202-35240221 None:intergenic 45.0%
GGTGGTGAGAGTAAATCTGT+GGG + chr1_1:35240212-35240231 None:intergenic 45.0%
TGATGCTAGCAGCCAAAAAG+AGG - chr1_1:35240252-35240271 Msa0020290:CDS 45.0%
CAGCCAAAAAGAGGATGATG+CGG - chr1_1:35240261-35240280 Msa0020290:CDS 45.0%
! CATCCGCATCATCCTCTTTT+TGG + chr1_1:35240267-35240286 None:intergenic 45.0%
CAAAAAGAGGATGATGCGGA+TGG - chr1_1:35240265-35240284 Msa0020290:CDS 45.0%
CATCAATGAGCTGGAGTTGT+CGG - chr1_1:35240366-35240385 Msa0020290:CDS 45.0%
TTGATACTGCTCTCGACAAG+TGG - chr1_1:35240482-35240501 Msa0020290:CDS 45.0%
TGATACTGCTCTCGACAAGT+GGG - chr1_1:35240483-35240502 Msa0020290:CDS 45.0%
!! CTCGACAAGTGGGTTGAAAA+AGG - chr1_1:35240493-35240512 Msa0020290:CDS 45.0%
AATGTATGGAAGGGCTTTGC+AGG - chr1_1:35240573-35240592 Msa0020290:CDS 45.0%
! GGACAAGTATTGTGAAACGG+AGG - chr1_1:35240918-35240937 Msa0020290:CDS 45.0%
GTCCTTAAGGAAGCTTCTAC+GGG + chr1_1:35241033-35241052 None:intergenic 45.0%
CGTCCTTAAGGAAGCTTCTA+CGG + chr1_1:35241034-35241053 None:intergenic 45.0%
CGTAGAAGCTTCCTTAAGGA+CGG - chr1_1:35241032-35241051 Msa0020290:CDS 45.0%
CTCCATTAACTGTGTTGGAG+CGG - chr1_1:35241157-35241176 Msa0020290:CDS 45.0%
GTGCAAGATCGTGATATCGT+GGG - chr1_1:35241203-35241222 Msa0020290:intron 45.0%
!! TTTTGCTATCGGGTTAGGTC+AGG + chr1_1:35241270-35241289 None:intergenic 45.0%
!!! GGGTTTTTTGCTATCGGGTT+AGG + chr1_1:35241275-35241294 None:intergenic 45.0%
CAGAGTCTCAATTGCAGTCT+CGG - chr1_1:35241394-35241413 Msa0020290:intron 45.0%
GGATATTTGACCCCACCTAA+TGG - chr1_1:35241859-35241878 Msa0020290:CDS 45.0%
GAGAACTAATCACCCTACTG+TGG + chr1_1:35242020-35242039 None:intergenic 45.0%
!! ACCAGTTTTCTTGGGGTGTT+TGG - chr1_1:35242081-35242100 Msa0020290:CDS 45.0%
ACCAAACACCCCAAGAAAAC+TGG + chr1_1:35242085-35242104 None:intergenic 45.0%
GAGGTTTCGATTCTCGTACT+TGG + chr1_1:35242160-35242179 None:intergenic 45.0%
GGGTGAGGAGGCTATTTATT+TGG + chr1_1:35242422-35242441 None:intergenic 45.0%
! GTATCTCTCATTGACTGCTC+AGG + chr1_1:35242443-35242462 None:intergenic 45.0%
GTTGCTGAACATGGCCAAAT+AGG - chr1_1:35242478-35242497 Msa0020290:intron 45.0%
GATGTGGCCAAGAACCTATT+TGG + chr1_1:35242495-35242514 None:intergenic 45.0%
! TTGCGAGGCAATTTAGGATG+TGG + chr1_1:35242511-35242530 None:intergenic 45.0%
TGTGAGTTGCGAGGCAATTT+AGG + chr1_1:35242517-35242536 None:intergenic 45.0%
CCTATGTATTGTGAGTTGCG+AGG + chr1_1:35242526-35242545 None:intergenic 45.0%
CCTCGCAACTCACAATACAT+AGG - chr1_1:35242523-35242542 Msa0020290:intron 45.0%
AGTCACATCCATGGTTGTCA+AGG + chr1_1:35242589-35242608 None:intergenic 45.0%
ATCTGCAAAAAGCTCGTTGG+TGG + chr1_1:35242759-35242778 None:intergenic 45.0%
! CTTGCTGAATTGCTGATTGC+TGG - chr1_1:35242807-35242826 Msa0020290:intron 45.0%
!! AAACATGGGCTGGAATGGAA+TGG + chr1_1:35242861-35242880 None:intergenic 45.0%
ATTGAGTGGTCATTGGAGGT+TGG - chr1_1:35243150-35243169 Msa0020290:intron 45.0%
GGTTGCCAAACCCTAATATG+GGG - chr1_1:35243171-35243190 Msa0020290:intron 45.0%
TGAAAGTTCAGCACAGAGGT+GGG + chr1_1:35243264-35243283 None:intergenic 45.0%
AGTTAGACGAGAGAGAGAGT+GGG + chr1_1:35243462-35243481 None:intergenic 45.0%
AAGTTAGACGAGAGAGAGAG+TGG + chr1_1:35243463-35243482 None:intergenic 45.0%
CAGGATGGCCAATATACCAA+AGG + chr1_1:35243649-35243668 None:intergenic 45.0%
!!! GTAGCAGTTTTGAAGTTGCC+GGG - chr1_1:35243671-35243690 Msa0020290:intron 45.0%
GGAGTGGGTAAAAAATGGAG+TGG + chr1_1:35243759-35243778 None:intergenic 45.0%
AATGGGGAGGAAAAATGGAG+AGG - chr1_1:35243880-35243899 Msa0020290:intron 45.0%
GTTTGACTCTAGCCAATCCA+AGG + chr1_1:35244129-35244148 None:intergenic 45.0%
ACTAGCTAACTGTGCTAGTC+TGG - chr1_1:35244286-35244305 Msa0020290:intron 45.0%
GTTGAGACAATGAAGGCAGA+AGG - chr1_1:35244542-35244561 Msa0020290:intron 45.0%
GTGAACTGGACCATCTAACA+CGG - chr1_1:35244567-35244586 Msa0020290:intron 45.0%
TGAACTGGACCATCTAACAC+GGG - chr1_1:35244568-35244587 Msa0020290:intron 45.0%
GCATAAAGGCGAAGCAAAGT+TGG + chr1_1:35244698-35244717 None:intergenic 45.0%
GCTTCGCCTTTATGCAATTC+TGG - chr1_1:35244703-35244722 Msa0020290:intron 45.0%
GCCTTTATGCAATTCTGGGT+AGG - chr1_1:35244708-35244727 Msa0020290:intron 45.0%
CCCTACCCAGAATTGCATAA+AGG + chr1_1:35244712-35244731 None:intergenic 45.0%
AGGTTTGTGAGTCAAAGCCA+CGG - chr1_1:35244756-35244775 Msa0020290:CDS 45.0%
CCTTGCTGCAATTGAAGCTT+GGG - chr1_1:35244790-35244809 Msa0020290:CDS 45.0%
CTTGCTGCAATTGAAGCTTG+GGG - chr1_1:35244791-35244810 Msa0020290:CDS 45.0%
CACAATAGGTCCAACAACCT+GGG - chr1_1:35244976-35244995 Msa0020290:CDS 45.0%
ATGGAGCAGTATGCAAAGAG+GGG - chr1_1:35245115-35245134 Msa0020290:CDS 45.0%
!! CCAAAGCTTTGTTGGGGAAT+AGG + chr1_1:35245288-35245307 None:intergenic 45.0%
CCTATTCCCCAACAAAGCTT+TGG - chr1_1:35245285-35245304 Msa0020290:intron 45.0%
!! TATTTATATATCATAATTAA+GGG + chr1_1:35241576-35241595 None:intergenic 5.0%
!! TTATTTATATATCATAATTA+AGG + chr1_1:35241577-35241596 None:intergenic 5.0%
CGAAGAGCCCACATACTTGT+TGG + chr1_1:35239862-35239881 None:intergenic 50.0%
!! ACAGCCTCCTCTGAAGTGTT+TGG + chr1_1:35240118-35240137 None:intergenic 50.0%
! TGTGGGAAGCATGAGGTATG+TGG + chr1_1:35240195-35240214 None:intergenic 50.0%
GGGTGGTGAGAGTAAATCTG+TGG + chr1_1:35240213-35240232 None:intergenic 50.0%
AGCCTGTGAGGAAAGTTCAC+GGG + chr1_1:35240233-35240252 None:intergenic 50.0%
CAGCCTGTGAGGAAAGTTCA+CGG + chr1_1:35240234-35240253 None:intergenic 50.0%
TTGACTGAGCCAGATGCAGA+CGG - chr1_1:35240316-35240335 Msa0020290:CDS 50.0%
AAGCAGGCAAGAGATTGGGT+TGG - chr1_1:35240525-35240544 Msa0020290:CDS 50.0%
CCTCTGATGAACCGTCCTTA+AGG + chr1_1:35241046-35241065 None:intergenic 50.0%
CCTTAAGGACGGTTCATCAG+AGG - chr1_1:35241043-35241062 Msa0020290:CDS 50.0%
CACCGCTCCAACACAGTTAA+TGG + chr1_1:35241162-35241181 None:intergenic 50.0%
GGTGCAAGATCGTGATATCG+TGG - chr1_1:35241202-35241221 Msa0020290:intron 50.0%
GGTGACAAAACCTTCACCAC+CGG + chr1_1:35241249-35241268 None:intergenic 50.0%
!! GCGCCTGCCACTCATTTTTA+GGG + chr1_1:35241295-35241314 None:intergenic 50.0%
!! TGCGCCTGCCACTCATTTTT+AGG + chr1_1:35241296-35241315 None:intergenic 50.0%
! GAAAGTGGACTTTCCGGATC+GGG + chr1_1:35241354-35241373 None:intergenic 50.0%
! GGAAAGTGGACTTTCCGGAT+CGG + chr1_1:35241355-35241374 None:intergenic 50.0%
GTTAACGAACGTGGAGGTTG+TGG + chr1_1:35242553-35242572 None:intergenic 50.0%
TTCCAACACTCCCCTAAAGC+TGG - chr1_1:35242613-35242632 Msa0020290:intron 50.0%
!! TTCCAGCTTTAGGGGAGTGT+TGG + chr1_1:35242618-35242637 None:intergenic 50.0%
!! TCTGCAAGTTGGCCTTGTGA+AGG - chr1_1:35242712-35242731 Msa0020290:intron 50.0%
GGCAATGGCACAATAGGAAG+AGG + chr1_1:35243220-35243239 None:intergenic 50.0%
GAAAGTTCAGCACAGAGGTG+GGG + chr1_1:35243263-35243282 None:intergenic 50.0%
CTGAAAGTTCAGCACAGAGG+TGG + chr1_1:35243265-35243284 None:intergenic 50.0%
TGGCTGAAAGTTCAGCACAG+AGG + chr1_1:35243268-35243287 None:intergenic 50.0%
!!! CAGTTTTGAAGTTGCCGGGT+TGG - chr1_1:35243675-35243694 Msa0020290:intron 50.0%
GCTGCATTGAATGACCAACC+CGG + chr1_1:35243692-35243711 None:intergenic 50.0%
GGTCATTCAATGCAGCTCTC+CGG - chr1_1:35243696-35243715 Msa0020290:intron 50.0%
GTCATTCAATGCAGCTCTCC+GGG - chr1_1:35243697-35243716 Msa0020290:intron 50.0%
TCATTCAATGCAGCTCTCCG+GGG - chr1_1:35243698-35243717 Msa0020290:intron 50.0%
AGGATCCCAACTCGTTTGCA+GGG - chr1_1:35243900-35243919 Msa0020290:intron 50.0%
TTGGTTGGAACTGTAGGCCT+TGG - chr1_1:35244109-35244128 Msa0020290:intron 50.0%
TGGAACTGTAGGCCTTGGAT+TGG - chr1_1:35244114-35244133 Msa0020290:intron 50.0%
CTTTGGTAGGCCACGCAATT+TGG + chr1_1:35244204-35244223 None:intergenic 50.0%
CAAATTGCGTGGCCTACCAA+AGG - chr1_1:35244202-35244221 Msa0020290:intron 50.0%
GAAGGCAGAAGGTTGTGAAC+TGG - chr1_1:35244553-35244572 Msa0020290:intron 50.0%
!! TTTTTCGGTAAGCCCAGCTG+CGG + chr1_1:35244615-35244634 None:intergenic 50.0%
GGTTTGTGAGTCAAAGCCAC+GGG - chr1_1:35244757-35244776 Msa0020290:CDS 50.0%
GCCTTGCTGCAATTGAAGCT+TGG - chr1_1:35244789-35244808 Msa0020290:CDS 50.0%
CCCAAGCTTCAATTGCAGCA+AGG + chr1_1:35244793-35244812 None:intergenic 50.0%
!! CAGGAGTGCTTCGTAATTCC+TGG + chr1_1:35244885-35244904 None:intergenic 50.0%
GCACAATAGGTCCAACAACC+TGG - chr1_1:35244975-35244994 Msa0020290:CDS 50.0%
ACAAGTGCATCCCAGGTTGT+TGG + chr1_1:35244989-35245008 None:intergenic 50.0%
AAGAGACACAAGTGCATCCC+AGG + chr1_1:35244996-35245015 None:intergenic 50.0%
TCAAGCAGGGGAAGTCGAAA+AGG - chr1_1:35245021-35245040 Msa0020290:CDS 50.0%
! GGCAGACACTGTTTTGCAGA+AGG - chr1_1:35245042-35245061 Msa0020290:CDS 50.0%
CATAAGCCTGTGCTAGAGCA+TGG + chr1_1:35245213-35245232 None:intergenic 50.0%
AACGCCAAACTACCGGCATA+TGG - chr1_1:35245235-35245254 Msa0020290:CDS 50.0%
ACGCCAAACTACCGGCATAT+GGG - chr1_1:35245236-35245255 Msa0020290:CDS 50.0%
GATCCCATATGCCGGTAGTT+TGG + chr1_1:35245242-35245261 None:intergenic 50.0%
AACTACCGGCATATGGGATC+AGG - chr1_1:35245242-35245261 Msa0020290:intron 50.0%
ACTACCGGCATATGGGATCA+GGG - chr1_1:35245243-35245262 Msa0020290:intron 50.0%
!! TGGGCAGCCAAAGCTTTGTT+GGG + chr1_1:35245295-35245314 None:intergenic 50.0%
TGGCGCAACTTGATCCGTTT+AGG - chr1_1:35245317-35245336 Msa0020290:intron 50.0%
GTGGGCTCTTCGCAGAACTT+CGG - chr1_1:35239870-35239889 Msa0020290:three_prime_UTR 55.0%
AGCATGAGGTATGTGGCGGT+AGG + chr1_1:35240188-35240207 None:intergenic 55.0%
! GGGAAGCATGAGGTATGTGG+CGG + chr1_1:35240192-35240211 None:intergenic 55.0%
CTGTGAGGAAAGTTCACGGG+TGG + chr1_1:35240230-35240249 None:intergenic 55.0%
CACCCGTGAACTTTCCTCAC+AGG - chr1_1:35240228-35240247 Msa0020290:CDS 55.0%
TGCGGATGGTCGTGATGACA+TGG - chr1_1:35240279-35240298 Msa0020290:CDS 55.0%
GGCCCGTAGAAGCTTCCTTA+AGG - chr1_1:35241028-35241047 Msa0020290:CDS 55.0%
ACTGTGTTGGAGCGGTGCAA+AGG - chr1_1:35241165-35241184 Msa0020290:CDS 55.0%
CAGCAACCCGGTCCACTAAA+AGG - chr1_1:35241314-35241333 Msa0020290:intron 55.0%
ATTGACTGCTCAGGGTGAGG+AGG + chr1_1:35242434-35242453 None:intergenic 55.0%
! CTCATTGACTGCTCAGGGTG+AGG + chr1_1:35242437-35242456 None:intergenic 55.0%
CCAGTGGGCAATGGCACAAT+AGG + chr1_1:35243226-35243245 None:intergenic 55.0%
! CCTATTGTGCCATTGCCCAC+TGG - chr1_1:35243223-35243242 Msa0020290:intron 55.0%
GCAGTAGGGTTTCGTCCAGT+GGG + chr1_1:35243241-35243260 None:intergenic 55.0%
GAGGATCCCAACTCGTTTGC+AGG - chr1_1:35243899-35243918 Msa0020290:intron 55.0%
GGATCCCAACTCGTTTGCAG+GGG - chr1_1:35243901-35243920 Msa0020290:intron 55.0%
CTCTCCCCTGCAAACGAGTT+GGG + chr1_1:35243908-35243927 None:intergenic 55.0%
CAACTCGTTTGCAGGGGAGA+GGG - chr1_1:35243907-35243926 Msa0020290:intron 55.0%
CCAAAGCTGCCCGTGTTAGA+TGG + chr1_1:35244580-35244599 None:intergenic 55.0%
CCATCTAACACGGGCAGCTT+TGG - chr1_1:35244577-35244596 Msa0020290:intron 55.0%
TCTGGGTAGGGCTGATGAAG+TGG - chr1_1:35244721-35244740 Msa0020290:intron 55.0%
! TGAGTCAAAGCCACGGGTTG+AGG - chr1_1:35244763-35244782 Msa0020290:CDS 55.0%
TCCGTTCCATGCTCTAGCAC+AGG - chr1_1:35245204-35245223 Msa0020290:CDS 55.0%
GCCTGTGCTAGAGCATGGAA+CGG + chr1_1:35245208-35245227 None:intergenic 55.0%
CTCTCCCTGATCCCATATGC+CGG + chr1_1:35245250-35245269 None:intergenic 55.0%
!! GGGCAGCCAAAGCTTTGTTG+GGG + chr1_1:35245294-35245313 None:intergenic 55.0%
! CTGGGCAGCCAAAGCTTTGT+TGG + chr1_1:35245296-35245315 None:intergenic 55.0%
! CAAAGCTTTGGCTGCCCAGT+TGG - chr1_1:35245297-35245316 Msa0020290:intron 55.0%
! CGGATCAAGTTGCGCCAACT+GGG + chr1_1:35245314-35245333 None:intergenic 55.0%
! ACGGATCAAGTTGCGCCAAC+TGG + chr1_1:35245315-35245334 None:intergenic 55.0%
! CTTCGGTTCGCCTCACCCTA+AGG - chr1_1:35239887-35239906 Msa0020290:three_prime_UTR 60.0%
GCTGCTAGCATCAGCCTGTG+AGG + chr1_1:35240245-35240264 None:intergenic 60.0%
CGGCTATCTCCGTCTGCATC+TGG + chr1_1:35240328-35240347 None:intergenic 60.0%
! GCAAAGGTGCGAGTGGTGTG+CGG - chr1_1:35241181-35241200 Msa0020290:intron 60.0%
GCAGCACTCTTCTCTTGCGC+CGG - chr1_1:35241227-35241246 Msa0020290:intron 60.0%
! TTCTCTTGCGCCGGTGGTGA+AGG - chr1_1:35241236-35241255 Msa0020290:intron 60.0%
! GAGGCCCCTGAAAGCATGAC+AGG + chr1_1:35243097-35243116 None:intergenic 60.0%
GGGTTTCGTCCAGTGGGCAA+TGG + chr1_1:35243235-35243254 None:intergenic 60.0%
GGCAGTAGGGTTTCGTCCAG+TGG + chr1_1:35243242-35243261 None:intergenic 60.0%
AGCACAGAGGTGGGGCAGTA+GGG + chr1_1:35243255-35243274 None:intergenic 60.0%
CCTCTCCCCTGCAAACGAGT+TGG + chr1_1:35243909-35243928 None:intergenic 60.0%
CCAACTCGTTTGCAGGGGAG+AGG - chr1_1:35243906-35243925 Msa0020290:intron 60.0%
CGTTTGCAGGGGAGAGGGAA+TGG - chr1_1:35243912-35243931 Msa0020290:intron 60.0%
! TAACACGGGCAGCTTTGGCC+AGG - chr1_1:35244582-35244601 Msa0020290:intron 60.0%
CCAGGCATTATGCCGCAGCT+GGG - chr1_1:35244600-35244619 Msa0020290:intron 60.0%
CGGCATATGGGATCAGGGAG+AGG - chr1_1:35245248-35245267 Msa0020290:intron 60.0%
! GAGCGGTGCAAAGGTGCGAG+TGG - chr1_1:35241174-35241193 Msa0020290:intron 65.0%
GCACTCTTCTCTTGCGCCGG+TGG - chr1_1:35241230-35241249 Msa0020290:intron 65.0%
CAGCACAGAGGTGGGGCAGT+AGG + chr1_1:35243256-35243275 None:intergenic 65.0%
GCCAGGCATTATGCCGCAGC+TGG - chr1_1:35244599-35244618 Msa0020290:intron 65.0%
CCCAGCTGCGGCATAATGCC+TGG + chr1_1:35244603-35244622 None:intergenic 65.0%
GCAAGGCAGTCCTCAACCCG+TGG + chr1_1:35244776-35244795 None:intergenic 65.0%
GAGTGGCAGGCGCAGCAACC+CGG - chr1_1:35241302-35241321 Msa0020290:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 35239750 35245564 35239750 ID=Msa0020290;Name=Msa0020290
chr1_1 mRNA 35239750 35245564 35239750 ID=Msa0020290-mRNA-1;Parent=Msa0020290;Name=Msa0020290-mRNA-1;_AED=0.04;_eAED=0.04;_QI=118|0.25|0.4|0.8|1|1|5|195|705
chr1_1 exon 35239750 35241189 35239750 ID=Msa0020290-mRNA-1:exon:11236;Parent=Msa0020290-mRNA-1
chr1_1 exon 35241795 35241879 35241795 ID=Msa0020290-mRNA-1:exon:11235;Parent=Msa0020290-mRNA-1
chr1_1 exon 35241977 35242204 35241977 ID=Msa0020290-mRNA-1:exon:11234;Parent=Msa0020290-mRNA-1
chr1_1 exon 35244739 35245257 35244739 ID=Msa0020290-mRNA-1:exon:11233;Parent=Msa0020290-mRNA-1
chr1_1 exon 35245406 35245564 35245406 ID=Msa0020290-mRNA-1:exon:11232;Parent=Msa0020290-mRNA-1
chr1_1 five_prime_UTR 35245447 35245564 35245447 ID=Msa0020290-mRNA-1:five_prime_utr;Parent=Msa0020290-mRNA-1
chr1_1 CDS 35245406 35245446 35245406 ID=Msa0020290-mRNA-1:cds;Parent=Msa0020290-mRNA-1
chr1_1 CDS 35244739 35245257 35244739 ID=Msa0020290-mRNA-1:cds;Parent=Msa0020290-mRNA-1
chr1_1 CDS 35241977 35242204 35241977 ID=Msa0020290-mRNA-1:cds;Parent=Msa0020290-mRNA-1
chr1_1 CDS 35241795 35241879 35241795 ID=Msa0020290-mRNA-1:cds;Parent=Msa0020290-mRNA-1
chr1_1 CDS 35239945 35241189 35239945 ID=Msa0020290-mRNA-1:cds;Parent=Msa0020290-mRNA-1
chr1_1 three_prime_UTR 35239750 35239944 35239750 ID=Msa0020290-mRNA-1:three_prime_utr;Parent=Msa0020290-mRNA-1
Gene Sequence

>Msa0020290

ATGTGGGCTCTTCGCAGAACTTCGGTTCGCCTCACCCTAAGAAACCAAGGGCTTAATAACAATTCAGGAATTTCTCGTGCCGCTTCTGTCAAATTAATTCCAAACACTTCAGAGGAGGCTGTTCCTGTTCCTGATTCTCATCAAATCATACATGCTCGATTTCTGACAACCTACCGCCACATACCTCATGCTTCCCACAGATTTACTCTCACCACCCGTGAACTTTCCTCACAGGCTGATGCTAGCAGCCAAAAAGAGGATGATGCGGATGGTCGTGATGACATGGAGATTGAAGATCGATTGACTGAGCCAGATGCAGACGGAGATAGCCGTGACACTGCTGAAATAGACATCAATGAGCTGGAGTTGTCGGATACTGAGACTGATTCATCTGACAAAAAATCACTTTCTACAAGGAGACGTTCAGAACTATTCAAGGCGATTGTAAGTGTTTCAGGTTTGTCAGTTGATACTGCTCTCGACAAGTGGGTTGAAAAAGGTAAAGAATTAAGCAGGCAAGAGATTGGGTTGGCATTGAATAGTCTTCGAAGGCGTAAAATGGGCCTCCCTGCATTATACAAAGCATCATGTTGTGTTTTGATTGAGTGGTCATTGGAGGTTGGTTGCCAAACCCTAATATGGGGAACAAAAGCTCCACTTTACTCTTCCTCTTCCTATTGTGCCATTGCCCACTGGACGAAACCCTACTGCCCCACCTCTGTGCTGAACTTTCAGCCAAACTTCTTTTCATCATCCCACTTGTTTACTGGTGATTTTCCAGAGCCCCATTCCAAAAAAACTCATTCTCTGCTCCCACTCTCTCTCTCGTCTAACTTATGCATGTCTTTGTTTCTTTTCTTTTCATCTTTTGCTGCCTTGGATTGGCTAGAGTCAAACAAAAAGCTTGAATTTACTGAGAAAGAGTATGCTTCTAAACTTGATTTGATTGCCAAATTGCGTGGCCTACCAAAGGCAGAAAAATACCTCGAGCATGTTCCAAATTCTTTCAGAGGAGAATTATTATACAGAACATTACTAGCTAACTGTGCTAGTCTGGAAAATTTGAGGAAAACGGAGGAAACATTCAACAAAATGAGGGAGTTAGGTTTTCCTGTTACAGCATTTGCTTGCAATCAGTTGCTTCTCATTTATAAGAAGATTGACAAGAAGAAAATAGCTGACGTGTTACTTATGATGGAAAAGGAGAATGTCAAACCTTCTTCTTATACTTACAAAATTTTAATAGACGTGAAGGGAATGTCTAATGATATTGATGGGATGTCTCAAATTGTTGAGACAATGAAGGCAGAAGGTTGTGAACTGGACCATCTAACACGGGCAGCTTTGGCCAGGCATTATGCCGCAGCTGGGCTTACCGAAAAAACTGAAGCTGTATTGAAGGAGATTGAAGGTGAAAACTTGAAAGAGAATATGTGGGTATGCCCAACTTTGCTTCGCCTTTATGCAATTCTGGGTAGGGCTGATGAAGTGGAGAGAATTTGGAAGGTTTGTGAGTCAAAGCCACGGGTTGAGGACTGCCTTGCTGCAATTGAAGCTTGGGGAAGATTGAAGAAAATTGAAGAAGCAGAGGCAGTTTTTGAGATGATGTCAAATAAATGGAAACTTACGGCCAGGAATTACGAAGCACTCCTGAAAATTTATATAAGGCATAAGATGCTAAACAAGGGTAAGGATCTTATTAAGACAATGGGAGATAGTAGATGCACAATAGGTCCAACAACCTGGGATGCACTTGTGTCTCTTTATGTTCAAGCAGGGGAAGTCGAAAAGGCAGACACTGTTTTGCAGAAGGCACTACAGCAAAATAAGATGAAGCCAATGTTTACTACTTATATGACTATTATGGAGCAGTATGCAAAGAGGGGTGACGTCCATAACGCAGAGAAGATTTTCTATAGATTGAGACAAGCTAATTATATTTCTAGAATATCTCCGTTCCATGCTCTAGCACAGGCTTATGAAAACGCCAAACTACCGGCATATGGGATCAGGGAGAGGATGAAAGCTGATAACCTATTCCCCAACAAAGCTTTGGCTGCCCAGTTGGCGCAACTTGATCCGTTTAGGAAAACTCCAGTTTCTGATTTGCTTGATTGA
Protein sequence

>Msa0020290

MWALRRTSVRLTLRNQGLNNNSGISRAASVKLIPNTSEEAVPVPDSHQIIHARFLTTYRHIPHASHRFTLTTRELSSQADASSQKEDDADGRDDMEIEDRLTEPDADGDSRDTAEIDINELELSDTETDSSDKKSLSTRRRSELFKAIVSVSGLSVDTALDKWVEKGKELSRQEIGLALNSLRRRKMGLPALYKASCCVLIEWSLEVGCQTLIWGTKAPLYSSSSYCAIAHWTKPYCPTSVLNFQPNFFSSSHLFTGDFPEPHSKKTHSLLPLSLSSNLCMSLFLFFSSFAALDWLESNKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAFACNQLLLIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGMSNDIDGMSQIVETMKAEGCELDHLTRAALARHYAAAGLTEKTEAVLKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTARNYEALLKIYIRHKMLNKGKDLIKTMGDSRCTIGPTTWDALVSLYVQAGEVEKADTVLQKALQQNKMKPMFTTYMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPFHALAQAYENAKLPAYGIRERMKADNLFPNKALAAQLAQLDPFRKTPVSDLLD*