AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0139350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0139350 MtrunA17_Chr4g0069701 97.987 944 18 1 1 943 1 944 0.0 1900
Msa0139350 MtrunA17_Chr4g0059031 23.948 689 453 17 63 728 58 698 1.32e-31 133
Msa0139350 MtrunA17_Chr1g0185501 26.471 306 194 9 365 653 24 315 1.18e-20 94.0
Msa0139350 MtrunA17_Chr1g0185501 26.042 288 179 7 467 748 50 309 1.61e-19 90.9
Msa0139350 MtrunA17_Chr1g0185501 31.579 152 104 0 542 693 30 181 1.86e-17 84.7
Msa0139350 MtrunA17_Chr1g0185501 27.059 170 101 2 101 270 22 168 1.55e-16 81.6
Msa0139350 MtrunA17_Chr1g0185501 26.016 123 91 0 571 693 17 139 7.42e-13 70.9
Msa0139350 MtrunA17_Chr1g0185501 23.786 206 145 5 24 223 117 316 2.91e-11 65.9
Msa0139350 MtrunA17_Chr1g0185501 25.949 158 115 2 63 218 67 224 4.96e-11 65.1
Msa0139350 MtrunA17_Chr4g0067151 27.969 261 170 6 402 654 75 325 1.52e-20 94.0
Msa0139350 MtrunA17_Chr4g0067151 32.934 167 110 2 54 218 67 233 3.20e-20 93.2
Msa0139350 MtrunA17_Chr4g0067151 28.662 157 111 1 545 700 84 240 2.60e-16 81.3
Msa0139350 MtrunA17_Chr4g0067151 25.497 302 178 7 396 692 18 277 6.11e-16 80.1
Msa0139350 MtrunA17_Chr4g0067151 25.683 183 104 3 97 270 18 177 6.04e-14 74.3
Msa0139350 MtrunA17_Chr4g0067151 22.105 190 137 5 39 222 142 326 1.35e-11 67.0
Msa0139350 MtrunA17_Chr6g0448921 27.473 182 125 2 40 220 40 215 4.91e-20 95.9
Msa0139350 MtrunA17_Chr6g0448921 26.943 193 130 2 501 693 32 213 1.85e-16 84.3
Msa0139350 MtrunA17_Chr6g0448921 28.571 196 131 4 15 208 57 245 3.91e-14 77.0
Msa0139350 MtrunA17_Chr6g0448921 25.503 149 111 0 71 219 24 172 3.13e-12 70.9
Msa0139350 MtrunA17_Chr3g0136971 24.464 233 157 2 474 698 407 628 1.08e-19 94.7
Msa0139350 MtrunA17_Chr3g0136971 28.497 193 105 4 66 230 352 539 2.49e-15 80.5
Msa0139350 MtrunA17_Chr3g0136971 32.673 101 68 0 79 179 518 618 1.22e-12 72.0
Msa0139350 MtrunA17_Chr3g0136971 26.056 142 105 0 78 219 433 574 3.71e-12 70.5
Msa0139350 MtrunA17_Chr2g0281451 25.773 194 137 2 40 232 39 226 2.27e-18 90.9
Msa0139350 MtrunA17_Chr2g0281451 26.667 150 110 0 70 219 22 171 2.26e-12 71.2
Msa0139350 MtrunA17_Chr2g0281451 26.289 194 130 3 501 693 31 212 9.28e-12 69.3
Msa0139350 MtrunA17_Chr1g0176241 28.627 255 162 5 399 650 244 481 9.80e-18 87.4
Msa0139350 MtrunA17_Chr1g0176241 30.380 158 101 4 67 217 121 276 1.84e-12 70.9
Msa0139350 MtrunA17_Chr1g0176241 30.263 152 100 4 69 217 333 481 3.08e-12 70.1
Msa0139350 MtrunA17_Chr1g0176241 29.341 167 110 4 542 702 122 286 1.64e-11 67.8
Msa0139350 MtrunA17_Chr5g0401661 33.793 145 94 2 78 222 410 552 4.14e-16 83.2
Msa0139350 MtrunA17_Chr1g0197551 23.897 272 167 4 454 696 19 279 4.53e-16 83.6
Msa0139350 MtrunA17_Chr1g0197551 27.612 134 97 0 86 219 31 164 3.63e-13 73.9
Msa0139350 MtrunA17_Chr4g0053651 32.124 193 115 6 43 222 256 445 9.19e-16 81.6
Msa0139350 MtrunA17_Chr4g0053651 26.705 176 107 4 63 224 373 540 2.95e-11 67.4
Msa0139350 MtrunA17_Chr2g0331961 25.368 272 185 7 408 672 20 280 1.06e-15 79.3
Msa0139350 MtrunA17_Chr7g0266251 27.670 206 130 5 501 693 37 236 4.72e-15 77.8
Msa0139350 MtrunA17_Chr7g0266251 26.442 208 123 7 78 272 36 226 6.25e-13 71.2
Msa0139350 MtrunA17_Chr7g0266251 31.176 170 99 6 68 221 72 239 4.40e-12 68.6
Msa0139350 MtrunA17_Chr5g0401671 32.414 145 96 2 78 222 320 462 6.94e-15 79.0
Msa0139350 MtrunA17_Chr5g0401671 27.338 139 88 3 101 230 425 559 2.57e-11 67.4
Msa0139350 MtrunA17_Chr8g0352821 25.101 247 169 6 449 692 188 421 7.48e-15 79.3
Msa0139350 MtrunA17_Chr8g0352821 30.675 163 108 3 85 246 288 446 1.00e-14 79.0
Msa0139350 MtrunA17_Chr8g0352821 29.560 159 104 5 76 231 322 475 2.35e-11 67.8
Msa0139350 MtrunA17_Chr1g0172501 31.944 144 97 1 550 692 409 552 8.72e-15 78.6
Msa0139350 MtrunA17_Chr1g0172501 26.295 251 169 7 22 268 318 556 2.67e-11 67.4
Msa0139350 MtrunA17_Chr7g0253861 32.787 122 80 2 102 221 51 172 9.27e-15 77.0
Msa0139350 MtrunA17_Chr3g0093681 31.944 144 97 1 550 692 409 552 1.94e-14 77.4
Msa0139350 MtrunA17_Chr3g0093681 23.574 263 172 5 433 692 274 510 1.36e-12 71.6
Msa0139350 MtrunA17_Chr3g0093681 26.587 252 167 8 22 268 318 556 4.11e-11 66.6
Msa0139350 MtrunA17_Chr4g0035611 27.660 141 102 0 79 219 24 164 3.82e-14 77.4
Msa0139350 MtrunA17_Chr4g0035611 23.308 266 164 4 460 696 25 279 4.09e-14 77.0
Msa0139350 MtrunA17_Chr5g0405851 26.126 222 150 4 472 692 241 449 4.31e-14 75.9
Msa0139350 MtrunA17_Chr5g0405851 29.464 224 143 6 48 268 242 453 5.23e-14 75.5
Msa0139350 MtrunA17_Chr1g0200901 25.676 296 205 8 401 693 119 402 5.62e-14 75.1
Msa0139350 MtrunA17_Chr1g0200901 28.856 201 97 5 70 224 85 285 9.00e-11 65.1
Msa0139350 MtrunA17_Chr2g0284241 24.904 261 179 7 380 631 70 322 6.78e-14 73.9
Msa0139350 MtrunA17_Chr2g0284241 19.608 306 234 5 374 673 23 322 2.59e-11 66.2
Msa0139350 MtrunA17_Chr2g0295791 29.530 149 104 1 571 718 160 308 1.08e-13 74.7
Msa0139350 MtrunA17_Chr2g0295791 26.882 186 135 1 542 726 173 358 8.39e-13 72.0
Msa0139350 MtrunA17_Chr2g0295791 27.273 154 111 1 68 220 173 326 2.67e-11 67.0
Msa0139350 MtrunA17_Chr4g0057141 22.475 396 266 17 274 651 273 645 1.32e-13 75.1
Msa0139350 MtrunA17_Chr1g0185891 22.222 396 267 17 274 651 212 584 3.35e-13 73.6
Msa0139350 MtrunA17_Chr4g0004241 22.603 292 202 7 408 689 18 295 7.07e-13 72.8
Msa0139350 MtrunA17_Chr4g0004241 31.387 137 90 3 85 217 120 256 1.83e-11 68.6
Msa0139350 MtrunA17_Chr4g0004241 23.887 247 171 5 454 695 25 259 2.93e-11 67.8
Msa0139350 MtrunA17_Chr7g0273631 27.778 126 91 0 95 220 207 332 2.33e-12 71.2
Msa0139350 MtrunA17_Chr2g0331981 22.483 298 206 8 403 689 12 295 2.62e-12 71.2
Msa0139350 MtrunA17_Chr2g0331981 31.387 137 90 3 85 217 120 256 1.46e-11 68.6
Msa0139350 MtrunA17_Chr2g0331981 23.810 252 175 5 449 695 20 259 1.53e-11 68.6
Msa0139350 MtrunA17_Chr1g0191191 30.702 114 79 0 101 214 212 325 4.98e-12 70.1
Msa0139350 MtrunA17_Chr1g0154301 23.333 300 193 10 402 694 109 378 7.09e-12 68.9
Msa0139350 MtrunA17_Chr3g0116561 26.977 215 140 6 21 220 169 381 1.06e-11 68.6
Msa0139350 MtrunA17_Chr7g0246741 26.697 221 122 6 62 272 366 556 1.18e-11 68.9
Msa0139350 MtrunA17_Chr8g0390861 26.316 133 96 1 85 217 973 1103 1.47e-11 68.9
Msa0139350 MtrunA17_Chr7g0237271 30.435 184 98 5 109 289 510 666 1.75e-11 68.2
Msa0139350 MtrunA17_Chr8g0392701 28.829 222 143 6 482 696 11 224 2.13e-11 66.2
Msa0139350 MtrunA17_Chr3g0099061 32.743 113 75 1 73 184 273 385 2.18e-11 67.4
Msa0139350 MtrunA17_Chr1g0148791 33.333 138 87 3 92 224 605 742 2.52e-11 67.8
Msa0139350 MtrunA17_Chr2g0292301 26.582 158 96 4 85 223 170 326 5.94e-11 66.2
Msa0139350 MtrunA17_Chr2g0292301 26.490 151 108 3 542 692 213 360 6.82e-11 65.9
Msa0139350 MtrunA17_Chr7g0237241 32.061 131 85 3 109 237 501 629 7.55e-11 66.2
Msa0139350 MtrunA17_Chr3g0138311 30.769 143 90 5 89 224 601 741 8.30e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0139350 AT3G21540.1 67.412 939 291 2 1 931 1 932 0.0 1296
Msa0139350 AT5G16750.1 25.895 363 251 8 385 731 336 696 2.72e-24 110
Msa0139350 AT5G16750.1 28.485 165 109 4 63 219 58 221 3.46e-13 74.3
Msa0139350 AT5G16750.1 27.950 161 110 3 539 693 60 220 3.90e-12 70.9
Msa0139350 AT5G08390.1 28.571 182 123 2 40 220 40 215 3.65e-20 97.1
Msa0139350 AT5G08390.1 24.870 193 134 2 501 693 32 213 5.06e-14 77.0
Msa0139350 AT5G08390.1 25.941 239 162 5 14 250 56 281 2.69e-12 71.6
Msa0139350 AT5G08390.1 25.503 149 111 0 71 219 24 172 1.62e-11 68.9
Msa0139350 AT5G23430.3 28.022 182 124 2 40 220 40 215 1.75e-19 94.7
Msa0139350 AT5G23430.3 25.907 193 132 2 501 693 32 213 2.17e-15 81.6
Msa0139350 AT5G23430.3 25.121 207 145 5 14 218 56 254 2.79e-11 68.2
Msa0139350 AT5G23430.3 25.503 149 111 0 71 219 24 172 7.82e-11 66.6
Msa0139350 AT5G23430.2 28.022 182 124 2 40 220 40 215 1.75e-19 94.7
Msa0139350 AT5G23430.2 25.907 193 132 2 501 693 32 213 2.17e-15 81.6
Msa0139350 AT5G23430.2 25.121 207 145 5 14 218 56 254 2.79e-11 68.2
Msa0139350 AT5G23430.2 25.503 149 111 0 71 219 24 172 7.82e-11 66.6
Msa0139350 AT5G23430.1 28.022 182 124 2 40 220 40 215 1.78e-19 94.7
Msa0139350 AT5G23430.1 25.907 193 132 2 501 693 32 213 2.17e-15 81.6
Msa0139350 AT5G23430.1 25.121 207 145 5 14 218 56 254 2.88e-11 68.2
Msa0139350 AT5G23430.1 25.503 149 111 0 71 219 24 172 7.76e-11 66.6
Msa0139350 AT3G49660.1 25.670 261 178 5 400 654 66 316 2.52e-19 90.5
Msa0139350 AT3G49660.1 28.500 200 141 2 22 219 28 227 6.22e-19 89.4
Msa0139350 AT3G49660.1 25.000 188 132 4 39 222 135 317 1.53e-17 85.1
Msa0139350 AT3G49660.1 30.573 157 108 1 545 700 77 233 3.53e-17 84.3
Msa0139350 AT3G49660.1 25.967 181 129 1 518 693 3 183 2.93e-13 72.4
Msa0139350 AT3G49660.1 23.381 278 154 5 467 697 52 317 3.80e-11 65.9
Msa0139350 AT3G49660.1 28.000 125 85 1 576 695 19 143 8.13e-11 65.1
Msa0139350 AT1G61210.3 28.022 182 124 3 40 220 39 214 8.27e-19 92.8
Msa0139350 AT1G61210.3 30.000 150 105 0 70 219 22 171 4.53e-14 77.4
Msa0139350 AT1G61210.3 25.758 198 126 4 501 693 31 212 5.77e-13 73.9
Msa0139350 AT1G61210.3 25.359 209 140 7 15 218 56 253 5.76e-11 67.4
Msa0139350 AT1G61210.2 28.022 182 124 3 40 220 39 214 1.00e-18 92.4
Msa0139350 AT1G61210.2 30.000 150 105 0 70 219 22 171 5.61e-14 77.0
Msa0139350 AT1G61210.2 25.758 198 126 4 501 693 31 212 6.13e-13 73.9
Msa0139350 AT1G61210.2 25.359 209 140 7 15 218 56 253 8.61e-11 66.6
Msa0139350 AT1G61210.1 28.022 182 124 3 40 220 39 214 1.17e-18 92.4
Msa0139350 AT1G61210.1 30.000 150 105 0 70 219 22 171 6.49e-14 77.0
Msa0139350 AT1G61210.1 25.758 198 126 4 501 693 31 212 6.67e-13 73.6
Msa0139350 AT1G61210.1 25.359 209 140 7 15 218 56 253 9.96e-11 66.6
Msa0139350 AT5G25150.1 24.215 223 158 1 484 706 416 627 1.38e-18 91.7
Msa0139350 AT5G25150.1 23.134 268 163 4 78 302 366 633 1.09e-14 79.0
Msa0139350 AT5G25150.1 27.389 157 112 1 63 219 419 573 6.52e-13 73.2
Msa0139350 AT5G25150.1 40.196 102 54 2 41 141 526 621 9.18e-12 69.7
Msa0139350 AT1G11160.4 28.571 182 123 3 40 220 39 214 1.72e-18 91.7
Msa0139350 AT1G11160.4 30.000 150 105 0 70 219 22 171 7.63e-15 79.7
Msa0139350 AT1G11160.4 23.423 222 148 5 478 693 7 212 2.85e-12 71.6
Msa0139350 AT5G25150.2 24.215 223 158 1 484 706 416 627 1.78e-18 91.3
Msa0139350 AT5G25150.2 23.134 268 163 4 78 302 366 633 1.11e-14 79.0
Msa0139350 AT5G25150.2 27.389 157 112 1 63 219 419 573 6.54e-13 73.2
Msa0139350 AT5G25150.2 40.196 102 54 2 41 141 526 621 8.98e-12 69.7
Msa0139350 AT1G11160.1 28.571 182 123 3 40 220 39 214 1.79e-18 91.7
Msa0139350 AT1G11160.1 30.000 150 105 0 70 219 22 171 7.78e-15 79.7
Msa0139350 AT1G11160.1 23.423 222 148 5 478 693 7 212 2.44e-12 71.6
Msa0139350 AT1G11160.2 28.571 182 123 3 40 220 39 214 1.85e-18 91.7
Msa0139350 AT1G11160.2 30.000 150 105 0 70 219 22 171 8.32e-15 79.7
Msa0139350 AT1G11160.2 23.423 222 148 5 478 693 7 212 2.75e-12 71.6
Msa0139350 AT4G02730.1 25.828 302 192 9 370 653 45 332 1.27e-17 85.9
Msa0139350 AT4G02730.1 28.926 121 85 1 101 220 38 158 6.18e-16 80.9
Msa0139350 AT4G02730.1 24.715 263 171 8 479 735 78 319 3.19e-15 78.6
Msa0139350 AT1G11160.3 28.931 159 112 1 63 220 14 172 2.54e-17 87.8
Msa0139350 AT1G11160.3 29.508 122 86 0 98 219 8 129 3.63e-11 67.8
Msa0139350 AT5G52820.1 28.854 253 163 6 399 650 235 471 3.45e-17 86.3
Msa0139350 AT5G52820.1 27.984 243 120 6 54 241 229 471 1.56e-12 71.6
Msa0139350 AT5G52820.1 30.723 166 107 4 63 221 107 271 8.59e-12 68.9
Msa0139350 AT5G52820.1 24.701 251 169 7 542 773 112 361 4.13e-11 67.0
Msa0139350 AT3G15980.7 24.161 298 201 8 403 689 12 295 8.83e-16 82.8
Msa0139350 AT3G15980.7 23.887 247 171 5 454 695 25 259 1.36e-11 69.3
Msa0139350 AT3G15980.7 30.657 137 91 3 85 217 120 256 7.54e-11 66.6
Msa0139350 AT3G15980.1 24.161 298 201 8 403 689 12 295 9.10e-16 82.8
Msa0139350 AT3G15980.1 23.887 247 171 5 454 695 25 259 1.31e-11 69.3
Msa0139350 AT3G15980.1 30.657 137 91 3 85 217 120 256 7.40e-11 67.0
Msa0139350 AT3G15980.5 24.161 298 201 8 403 689 12 295 9.31e-16 82.8
Msa0139350 AT3G15980.5 23.887 247 171 5 454 695 25 259 1.47e-11 69.3
Msa0139350 AT3G15980.5 30.657 137 91 3 85 217 120 256 8.13e-11 66.6
Msa0139350 AT3G15980.3 24.161 298 201 8 403 689 12 295 9.39e-16 82.8
Msa0139350 AT3G15980.3 23.887 247 171 5 454 695 25 259 1.41e-11 69.3
Msa0139350 AT3G15980.3 30.657 137 91 3 85 217 120 256 8.81e-11 66.6
Msa0139350 AT3G15980.6 24.161 298 201 8 403 689 12 295 9.39e-16 82.8
Msa0139350 AT3G15980.6 23.887 247 171 5 454 695 25 259 1.41e-11 69.3
Msa0139350 AT3G15980.6 30.657 137 91 3 85 217 120 256 8.81e-11 66.6
Msa0139350 AT3G15980.2 24.161 298 201 8 403 689 12 295 9.39e-16 82.8
Msa0139350 AT3G15980.2 23.887 247 171 5 454 695 25 259 1.41e-11 69.3
Msa0139350 AT3G15980.2 30.657 137 91 3 85 217 120 256 8.81e-11 66.6
Msa0139350 AT3G15980.4 24.161 298 201 8 403 689 12 295 9.39e-16 82.8
Msa0139350 AT3G15980.4 23.887 247 171 5 454 695 25 259 1.41e-11 69.3
Msa0139350 AT3G15980.4 30.657 137 91 3 85 217 120 256 8.81e-11 66.6
Msa0139350 AT5G13480.2 31.902 163 106 3 85 246 239 397 9.42e-16 82.4
Msa0139350 AT5G13480.2 24.823 282 186 8 432 702 116 382 1.36e-11 68.9
Msa0139350 AT5G13480.2 29.861 144 98 3 76 217 273 415 6.03e-11 67.0
Msa0139350 AT5G13480.3 31.902 163 106 3 85 246 216 374 1.00e-15 82.0
Msa0139350 AT5G13480.3 24.823 282 186 8 432 702 93 359 1.39e-11 68.9
Msa0139350 AT5G13480.3 29.861 144 98 3 76 217 250 392 6.76e-11 66.6
Msa0139350 AT5G13480.4 31.902 163 106 3 85 246 216 374 1.15e-15 82.0
Msa0139350 AT5G13480.4 24.823 282 186 8 432 702 93 359 1.18e-11 68.9
Msa0139350 AT5G13480.4 29.861 144 98 3 76 217 250 392 7.55e-11 66.6
Msa0139350 AT5G13480.1 31.902 163 106 3 85 246 228 386 1.58e-15 81.6
Msa0139350 AT5G13480.1 25.081 307 197 9 414 702 80 371 1.42e-11 68.9
Msa0139350 AT5G13480.1 29.861 144 98 3 76 217 262 404 9.65e-11 66.2
Msa0139350 AT2G26060.2 25.806 248 152 8 465 692 5 240 4.16e-15 78.2
Msa0139350 AT2G26060.2 32.121 165 96 7 68 217 77 240 1.69e-11 67.4
Msa0139350 AT2G26060.2 25.000 216 136 7 68 272 31 231 2.41e-11 66.6
Msa0139350 AT2G26060.1 25.806 248 152 8 465 692 5 240 4.69e-15 78.2
Msa0139350 AT2G26060.1 32.121 165 96 7 68 217 77 240 2.25e-11 67.0
Msa0139350 AT2G26060.1 25.000 216 136 7 68 272 31 231 3.43e-11 66.6
Msa0139350 AT2G43770.1 31.148 122 82 2 102 221 49 170 6.93e-15 77.8
Msa0139350 AT2G43770.1 25.670 261 174 7 482 741 49 290 2.20e-11 67.0
Msa0139350 AT2G21390.1 28.358 134 96 0 86 219 31 164 2.45e-14 78.2
Msa0139350 AT2G21390.1 22.794 272 170 4 454 696 19 279 1.22e-13 75.9
Msa0139350 AT2G21390.1 22.515 342 222 10 354 689 9 313 1.30e-11 69.3
Msa0139350 AT3G18140.1 25.738 237 167 5 380 613 55 285 2.45e-14 75.5
Msa0139350 AT3G18140.1 22.712 295 198 9 413 692 1 280 1.46e-13 73.2
Msa0139350 AT3G18140.1 19.870 307 228 6 374 673 8 303 9.95e-11 64.7
Msa0139350 AT1G62020.1 27.660 141 102 0 79 219 24 164 3.53e-14 77.8
Msa0139350 AT1G62020.1 22.807 342 215 10 354 686 9 310 1.95e-11 68.9
Msa0139350 AT1G62020.1 23.868 243 159 5 454 696 19 235 3.72e-11 67.8
Msa0139350 AT1G52360.3 23.154 298 204 8 403 689 12 295 1.41e-13 75.9
Msa0139350 AT1G52360.3 31.387 137 90 3 85 217 120 256 2.50e-11 68.6
Msa0139350 AT1G52360.3 23.887 247 171 5 454 695 25 259 7.01e-11 67.0
Msa0139350 AT1G52360.4 23.154 298 204 8 403 689 12 295 1.42e-13 75.9
Msa0139350 AT1G52360.4 31.387 137 90 3 85 217 120 256 2.46e-11 68.6
Msa0139350 AT1G52360.4 23.887 247 171 5 454 695 25 259 7.02e-11 67.0
Msa0139350 AT1G52360.1 23.154 298 204 8 403 689 12 295 1.42e-13 75.9
Msa0139350 AT1G52360.1 31.387 137 90 3 85 217 120 256 2.46e-11 68.6
Msa0139350 AT1G52360.1 23.887 247 171 5 454 695 25 259 7.02e-11 67.0
Msa0139350 AT1G52360.2 23.154 298 204 8 403 689 56 339 1.59e-13 75.5
Msa0139350 AT1G52360.2 31.387 137 90 3 85 217 164 300 2.73e-11 68.2
Msa0139350 AT1G52360.2 23.887 247 171 5 454 695 69 303 7.28e-11 67.0
Msa0139350 AT3G16650.1 31.818 132 89 1 571 701 160 291 1.78e-13 74.3
Msa0139350 AT3G16650.1 29.677 155 105 3 68 220 173 325 2.34e-12 70.9
Msa0139350 AT3G16650.1 28.289 152 108 1 542 693 173 323 9.88e-12 68.9
Msa0139350 AT4G15900.1 31.298 131 89 1 571 700 166 296 1.99e-13 74.3
Msa0139350 AT4G15900.1 27.419 186 134 1 542 726 179 364 6.35e-13 72.8
Msa0139350 AT4G15900.1 27.922 154 110 1 68 220 179 332 6.81e-12 69.3
Msa0139350 AT1G49040.1 27.068 133 95 1 85 217 959 1089 2.16e-13 75.1
Msa0139350 AT1G49040.1 31.206 141 92 3 82 220 873 1010 8.56e-11 66.6
Msa0139350 AT1G79990.1 22.569 288 207 6 408 689 18 295 3.15e-13 74.7
Msa0139350 AT1G79990.1 31.387 137 90 3 85 217 120 256 4.38e-11 67.4
Msa0139350 AT1G79990.1 24.900 249 166 6 454 695 25 259 4.65e-11 67.4
Msa0139350 AT3G05090.2 30.252 119 83 0 96 214 203 321 3.35e-13 74.3
Msa0139350 AT3G05090.3 30.252 119 83 0 96 214 203 321 3.35e-13 74.3
Msa0139350 AT3G05090.1 30.252 119 83 0 96 214 203 321 3.35e-13 74.3
Msa0139350 AT1G79990.2 22.569 288 207 6 408 689 18 295 3.36e-13 74.3
Msa0139350 AT1G79990.2 31.387 137 90 3 85 217 120 256 4.33e-11 67.8
Msa0139350 AT1G79990.2 24.900 249 166 6 454 695 25 259 4.96e-11 67.4
Msa0139350 AT1G71840.1 31.507 146 97 2 77 219 126 271 4.68e-13 72.8
Msa0139350 AT1G10580.1 22.222 396 266 18 274 651 202 573 1.39e-12 72.0
Msa0139350 AT2G41500.1 28.249 177 120 3 542 717 384 554 2.59e-12 71.2
Msa0139350 AT2G41500.1 25.974 154 112 2 68 220 301 453 4.77e-11 67.0
Msa0139350 AT2G41500.2 28.249 177 120 3 542 717 384 554 2.59e-12 71.2
Msa0139350 AT2G41500.2 25.974 154 112 2 68 220 301 453 4.77e-11 67.0
Msa0139350 AT1G73720.1 32.143 112 76 0 73 184 272 383 3.54e-12 70.5
Msa0139350 AT4G29830.1 22.989 261 185 6 428 677 42 297 3.78e-12 68.9
Msa0139350 AT4G29830.1 31.013 158 101 4 68 217 161 318 2.48e-11 66.6
Msa0139350 AT1G24130.1 28.910 211 126 8 487 694 118 307 4.09e-12 69.7
Msa0139350 AT2G22040.1 24.464 233 168 5 404 632 83 311 6.16e-12 68.2
Msa0139350 AT5G67320.1 26.056 142 96 1 101 233 443 584 7.33e-12 69.7
Msa0139350 AT5G67320.1 30.822 146 99 2 78 223 338 481 1.13e-11 69.3
Msa0139350 AT3G18950.1 29.474 190 119 7 446 630 249 428 9.79e-12 68.9
Msa0139350 AT1G49040.3 31.206 141 92 3 82 220 873 1010 7.79e-11 67.0

Find 221 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGATTAGATTATTGTTTA+AGG 0.109361 1_3:-73003901 None:intergenic
CTGCCTCAGTTAGAGGTTTA+TGG 0.129256 1_3:-73002023 None:intergenic
AAGATTTGGGGTTTGGATTT+TGG 0.143988 1_3:+73005739 Msa0139350:CDS
GACCAGGTTTCTGCTTAATT+TGG 0.213610 1_3:-73004316 None:intergenic
TCCGATGTCAATAATTTCTA+AGG 0.231965 1_3:-73004171 None:intergenic
AGGACCATTGATTCTGGATA+TGG 0.253244 1_3:+73004089 Msa0139350:CDS
TGCTTAAGGACCATTGATTC+TGG 0.267799 1_3:+73004083 Msa0139350:CDS
TTGTAGATTGCTGGTGGTTA+TGG 0.269715 1_3:+73002365 Msa0139350:intron
AAATATAAAGATTTGGGGTT+TGG 0.274000 1_3:+73005732 Msa0139350:CDS
AATTTCTAAGGTTCCCTCTT+TGG 0.279588 1_3:-73004159 None:intergenic
AAGGACATCATGCAGATATT+TGG 0.284825 1_3:+73006019 Msa0139350:CDS
CTTGGTTCGTTACTTGCTTC+TGG 0.290833 1_3:+73002485 Msa0139350:CDS
AAGATCATGATGTAAAGTTT+TGG 0.301006 1_3:+73004288 Msa0139350:CDS
GGTGAGAGGTTTCTTGTTAC+GGG 0.301877 1_3:+73003372 Msa0139350:CDS
GCTACAGAGGGAACTGAAAA+TGG 0.302758 1_3:+73003699 Msa0139350:CDS
CAGAGCAACAGCGATATATT+TGG 0.305314 1_3:-73004867 None:intergenic
ATTCTTCCGTTTCAAACAAA+TGG 0.310504 1_3:+73003472 Msa0139350:CDS
AAAGTAATCTGTCAGTGATA+TGG 0.314002 1_3:+73010062 Msa0139350:exon
ATTGTTGCTGCCTCAGTTAG+AGG 0.314308 1_3:-73002030 None:intergenic
AGATGTTCACTCGAATGATT+TGG 0.314751 1_3:+73007236 Msa0139350:CDS
ATTCTCCCCACTAACAAGTA+TGG 0.315078 1_3:+73004125 Msa0139350:CDS
TTGTTGTTGTTGTAGATTGC+TGG 0.316564 1_3:+73002356 Msa0139350:intron
AGGGTTTATGTTTCTGAATT+CGG 0.323049 1_3:-73001991 None:intergenic
AAATTCTTCCTTTCATTGTA+TGG 0.324955 1_3:+73005637 Msa0139350:CDS
TGACCTATCTTGTAAACGTT+TGG 0.330769 1_3:-73010001 None:intergenic
GTGACAAAGCCATGTTTATC+TGG 0.332607 1_3:-73004257 None:intergenic
AGTTAGAGGTTTATGGCTTC+AGG 0.333267 1_3:-73002016 None:intergenic
GAGCAGCTGTTAACTCTTGA+AGG 0.344882 1_3:+73006000 Msa0139350:CDS
AGCTTCAAAGCATCTGAAAA+AGG 0.349352 1_3:-73008681 None:intergenic
GACACGGAACGGAAGGAGTT+AGG 0.353040 1_3:-73002212 None:intergenic
GAGGGAGCAGTGGCCGTAGC+TGG 0.355157 1_3:+73006458 Msa0139350:CDS
GCGGGCATCATAGTGAAATT+TGG 0.355465 1_3:+73003331 Msa0139350:CDS
TAGAGCTTTGATCCCCAAAA+AGG 0.355848 1_3:+73010201 Msa0139350:three_prime_UTR
CGGCGTATGGCACGTGCGAC+AGG 0.357028 1_3:+73002173 Msa0139350:CDS
TGGTGAGAGGTTTCTTGTTA+CGG 0.358856 1_3:+73003371 Msa0139350:CDS
CGCATCTTCCCCTTCTCAAT+TGG 0.360934 1_3:+73002263 Msa0139350:CDS
CAGGGTTGGAAAGATATCTT+TGG 0.366703 1_3:+73009793 Msa0139350:intron
ACGGTCCAGTTCAACAAGTC+TGG 0.368774 1_3:+73003549 Msa0139350:CDS
ACTTGTGAAACTACTTTGAA+TGG 0.371051 1_3:+73002425 Msa0139350:CDS
CTGCTAGCCTGTCATGTTGC+AGG 0.373311 1_3:+73003576 Msa0139350:CDS
GTTATGGTGATGGCAGTATA+AGG 0.381571 1_3:+73002381 Msa0139350:CDS
GAGGTTTATGGCTTCAGGGC+AGG 0.384854 1_3:-73002011 None:intergenic
TTTGGTTTCACCACTTTCAA+TGG 0.388959 1_3:-73003931 None:intergenic
TGGAGAGAGAAGGTGTTTGC+CGG 0.397043 1_3:-73002136 None:intergenic
CAAGCACTGGTTCCTGCTTA+AGG 0.399856 1_3:+73004069 Msa0139350:CDS
ACTACTTTGAATGGACATAA+AGG 0.403139 1_3:+73002434 Msa0139350:CDS
AACAAGTCCATACTTGTTAG+TGG 0.404799 1_3:-73004132 None:intergenic
GTGATGGCAGTATAAGGCTT+TGG 0.406032 1_3:+73002387 Msa0139350:CDS
TACGAGCCGTCGGCCTCGTT+CGG 0.406186 1_3:+73002072 Msa0139350:CDS
TTATCATTCTCTTTCACTAA+AGG 0.408940 1_3:-73010178 None:intergenic
TTTACGGTTAACCCTACGTT+TGG 0.412708 1_3:-73003652 None:intergenic
CTAAACACATAATGTGTCTT+GGG 0.413873 1_3:-73005931 None:intergenic
CCCTGACAAGAAAACCGTAT+TGG 0.418561 1_3:-73010417 None:intergenic
AGGTTTATGGCTTCAGGGCA+GGG 0.427509 1_3:-73002010 None:intergenic
AGAAAAGGAGAAAAGGTTAG+AGG 0.430268 1_3:+73006367 Msa0139350:CDS
AATCCAAACGTTTACAAGAT+AGG 0.431727 1_3:+73009998 Msa0139350:CDS
CAAGCTGCCTGTTCTGTGTA+TGG 0.432952 1_3:+73005663 Msa0139350:CDS
ATGGACTTCATATTCTGATA+AGG 0.434489 1_3:+73008722 Msa0139350:CDS
TATTAAATTATTACTGATGC+TGG 0.435590 1_3:+73010274 Msa0139350:three_prime_UTR
GTTGAGCTTGTTTGCCGCAT+AGG 0.437045 1_3:+73008887 Msa0139350:CDS
AACATCCCATTTGTTTGAAA+CGG 0.438262 1_3:-73003478 None:intergenic
GGATCGGGTAGTAAAGTATT+GGG 0.438596 1_3:+73005963 Msa0139350:CDS
CAGCACTGTATGCAAATTGT+AGG 0.439645 1_3:+73003309 Msa0139350:CDS
ATGACCGCTCAATTCGCCGC+TGG 0.439674 1_3:+73006088 Msa0139350:CDS
ATATATCGCTGTTGCTCTGT+TGG 0.442603 1_3:+73004871 Msa0139350:CDS
ACTAAACACATAATGTGTCT+TGG 0.450141 1_3:-73005932 None:intergenic
ACTAACAAGTATGGACTTGT+TGG 0.450467 1_3:+73004134 Msa0139350:CDS
TGATGGCAGTATAAGGCTTT+GGG 0.451384 1_3:+73002388 Msa0139350:CDS
AAGGCTTTGGGACACTGATA+AGG 0.454505 1_3:+73002400 Msa0139350:CDS
TGCAGGAAGAAAAGGAGAAA+AGG 0.456027 1_3:+73006360 Msa0139350:intron
TTCTTCCGTTTCAAACAAAT+GGG 0.456759 1_3:+73003473 Msa0139350:CDS
GCTCTTCGTTATAATAAGCT+TGG 0.457028 1_3:+73002467 Msa0139350:CDS
ACACGGAACGGAAGGAGTTA+GGG 0.460558 1_3:-73002211 None:intergenic
GGTTAGAGTAAAAGAAAAGA+AGG 0.462341 1_3:+73001957 None:intergenic
AAGTAATCTGTCAGTGATAT+GGG 0.462829 1_3:+73010063 Msa0139350:exon
CAGGCAAATCCGCTTATGAA+TGG 0.463316 1_3:+73007177 Msa0139350:CDS
GATTCCCAGACTTGTTGAAC+TGG 0.464352 1_3:-73003554 None:intergenic
CATTCATAAGCGGATTTGCC+TGG 0.466961 1_3:-73007176 None:intergenic
ACCGGTCTCTTTCGTCTTCG+CGG 0.468552 1_3:+73002551 Msa0139350:CDS
AAAGCGCATTAGTGAACATC+AGG 0.469415 1_3:+73006553 Msa0139350:CDS
TCTCCAGCTCTCGAGAAAAT+CGG 0.471941 1_3:+73002153 Msa0139350:CDS
GTTAGAGGTTTATGGCTTCA+GGG 0.473122 1_3:-73002015 None:intergenic
TGATTTGGAGCAAACATTGT+TGG 0.473436 1_3:+73007251 Msa0139350:CDS
TTACAAGATAGGTCAGATAC+TGG 0.473870 1_3:+73010009 Msa0139350:CDS
TGGGATGTTGTTGGTGAGAC+CGG 0.475059 1_3:+73002533 Msa0139350:CDS
TCTTCGCGGTCATCGCGATC+AGG 0.476794 1_3:+73002565 Msa0139350:CDS
TGACCGCTCAATTCGCCGCT+GGG 0.478756 1_3:+73006089 Msa0139350:CDS
GATATATCCATACACAGAAC+AGG 0.484826 1_3:-73005670 None:intergenic
CTTAAGCAGGAACCAGTGCT+TGG 0.485480 1_3:-73004068 None:intergenic
AGAATCAATGGTCCTTAAGC+AGG 0.485502 1_3:-73004081 None:intergenic
AGGATCGGGTAGTAAAGTAT+TGG 0.486881 1_3:+73005962 Msa0139350:CDS
TGCAGCCATGGATCATATCC+AGG 0.490141 1_3:+73009825 Msa0139350:CDS
TTTGGCTTTACGCTTTGCTT+CGG 0.490529 1_3:-73003634 None:intergenic
AGGCTTTGGGACACTGATAA+GGG 0.491112 1_3:+73002401 Msa0139350:CDS
ACACTTGGTATTGATCTTGA+AGG 0.491254 1_3:+73003957 Msa0139350:CDS
TCTGTTGGATAGTACTGTTA+AGG 0.493169 1_3:+73004886 Msa0139350:CDS
GATGGAGATTTAATTGTGAC+TGG 0.497096 1_3:+73005697 Msa0139350:CDS
GATAATTCTATTGTGACTGA+TGG 0.498422 1_3:+73003741 Msa0139350:CDS
ATGAGCAAAATTAACCTCAC+TGG 0.501125 1_3:+73010097 Msa0139350:three_prime_UTR
TCGAAGTGTCACACTTAGTT+CGG 0.501489 1_3:+73003995 Msa0139350:CDS
ACGGCCACTGCTCCCTCCTC+TGG 0.501732 1_3:-73006452 None:intergenic
CTGTCATGTTGCAGGAAAGA+TGG 0.502399 1_3:+73003584 Msa0139350:CDS
GGATGCAAGATCAAAACTGC+TGG 0.507524 1_3:+73009960 Msa0139350:CDS
GTTTAGTGTCGGAAAGGATC+GGG 0.507850 1_3:+73005948 Msa0139350:CDS
ATCAAGCAAGATTCTGTGGA+TGG 0.509316 1_3:+73003426 Msa0139350:CDS
TAATTAAGTCTGTAGCGGTA+AGG 0.511934 1_3:-73006499 None:intergenic
GACAGGTCTGGCAGCTGGTG+TGG 0.512064 1_3:-73008948 None:intergenic
TCATAGTGAAATTTGGACAT+TGG 0.512902 1_3:+73003338 Msa0139350:CDS
AATTAAGTCTGTAGCGGTAA+GGG 0.514161 1_3:-73006498 None:intergenic
TGTAGCGGTAAGGGTTTCCT+CGG 0.514281 1_3:-73006489 None:intergenic
TGATGCTGGTGGCTCAGAAA+AGG 0.516790 1_3:+73010288 Msa0139350:three_prime_UTR
AGGGAGCAGTGGCCGTAGCT+GGG 0.517314 1_3:+73006459 Msa0139350:CDS
GTTAAGACAGGTCTGGCAGC+TGG 0.518162 1_3:-73008953 None:intergenic
AGAGTTGCTAGTGAATTCTT+CGG 0.519278 1_3:-73003870 None:intergenic
AGTGAATTCTTCGGAGTGGT+TGG 0.520843 1_3:-73003861 None:intergenic
TGGACATTGGATGTTGATCC+TGG 0.522650 1_3:+73003351 Msa0139350:CDS
GATAAACATGGCTTTGTCAC+AGG 0.523100 1_3:+73004260 Msa0139350:CDS
AATGATCTTTCAGCAACTGA+TGG 0.529089 1_3:+73009912 Msa0139350:intron
GAGTCCATATCCAGAATCAA+TGG 0.530332 1_3:-73004093 None:intergenic
ACAGCGATATATTTGGCATC+GGG 0.531978 1_3:-73004860 None:intergenic
AGCTTCAATTGCTTCAACAC+GGG 0.533328 1_3:-73004201 None:intergenic
TTCAATCAAGCAAGATTCTG+TGG 0.535136 1_3:+73003422 Msa0139350:CDS
TGAAAGCAATTATGCACTGA+AGG 0.536286 1_3:+73006421 Msa0139350:CDS
GTTGAAGCAATTGAAGCTCA+TGG 0.539923 1_3:+73004206 Msa0139350:CDS
AATTGAGCGGTCATGAGATC+CGG 0.540179 1_3:-73006079 None:intergenic
CATCTTTCCTGCAACATGAC+AGG 0.541618 1_3:-73003583 None:intergenic
ATAGAAAATGTCACTGAAGT+CGG 0.547137 1_3:-73008975 None:intergenic
GGACCACGACACGGAACGGA+AGG 0.548117 1_3:-73002219 None:intergenic
AACAGCGATATATTTGGCAT+CGG 0.548555 1_3:-73004861 None:intergenic
CGGTCCAGTTCAACAAGTCT+GGG 0.549117 1_3:+73003550 Msa0139350:CDS
TGTCAGGGCTAATACCCTGT+TGG 0.549353 1_3:+73010432 Msa0139350:three_prime_UTR
TCAAGCAAGATTCTGTGGAT+GGG 0.549521 1_3:+73003427 Msa0139350:CDS
TGTTTAGTGTCGGAAAGGAT+CGG 0.551127 1_3:+73005947 Msa0139350:CDS
TCACTGAAGTCGGTTAAGAC+AGG 0.552322 1_3:-73008965 None:intergenic
ACTCCTTCCGTTCCGTGTCG+TGG 0.553440 1_3:+73002216 Msa0139350:CDS
ACAAGTCCATACTTGTTAGT+GGG 0.553620 1_3:-73004131 None:intergenic
CAAGCAAGATTCTGTGGATG+GGG 0.554324 1_3:+73003428 Msa0139350:CDS
GAGTTCTACTCCATTGAAAG+TGG 0.554816 1_3:+73003921 Msa0139350:CDS
AGAAGGACCACGACACGGAA+CGG 0.556048 1_3:-73002223 None:intergenic
CTGTGATTACCAATTGAGAA+GGG 0.557042 1_3:-73002272 None:intergenic
TCTCGAGAGCTGGAGAGAGA+AGG 0.557092 1_3:-73002146 None:intergenic
CTCTCGAGAAAATCGGCGTA+TGG 0.558021 1_3:+73002160 Msa0139350:CDS
ATTGCTGGTGGTTATGGTGA+TGG 0.558530 1_3:+73002371 Msa0139350:CDS
GGGGAGTCTGTAAAGGATGG+TGG 0.560773 1_3:+73003447 Msa0139350:CDS
CAAATCCGCTTATGAATGGC+CGG 0.563016 1_3:+73007181 Msa0139350:CDS
AAAATATGGAATCCAAGCAC+TGG 0.566139 1_3:+73004056 Msa0139350:CDS
ACGAGGCCGACGGCTCGTAT+CGG 0.566937 1_3:-73002068 None:intergenic
GGAATATTACGCACTTGACC+AGG 0.569823 1_3:-73004332 None:intergenic
GCTTGTGGCCATACAATGAA+AGG 0.569849 1_3:-73005645 None:intergenic
GAACATAATCAGAAGGTGAC+CGG 0.571125 1_3:-73007200 None:intergenic
TGTTACGGGTTCTGCAGACA+AGG 0.571983 1_3:+73003386 Msa0139350:CDS
TGCTAGTGAATTCTTCGGAG+TGG 0.572514 1_3:-73003865 None:intergenic
GGTAGAAATATTCCGTGTGT+TGG 0.573652 1_3:+73003605 Msa0139350:CDS
ACACATTATGTGTTTAGTGT+CGG 0.574367 1_3:+73005937 Msa0139350:CDS
ACCGCGAAGACGAAAGAGAC+CGG 0.574420 1_3:-73002552 None:intergenic
AACATCTCATACGACAGCTC+CGG 0.574427 1_3:+73002117 Msa0139350:CDS
CATAGTCTTGACATTTGACA+CGG 0.577529 1_3:-73004801 None:intergenic
CACTGTATGCAAATTGTAGG+CGG 0.577657 1_3:+73003312 Msa0139350:CDS
CTCAATAATTAAGTCTGTAG+CGG 0.578373 1_3:-73006504 None:intergenic
AAAGCCATGTTTATCTGGCA+AGG 0.580945 1_3:-73004252 None:intergenic
TCTAACTGAGGCAGCAACAA+TGG 0.582775 1_3:+73002032 Msa0139350:exon
AATACCAGAGGAGGGAGCAG+TGG 0.584540 1_3:+73006448 Msa0139350:CDS
GGCGTATGGCACGTGCGACA+GGG 0.587169 1_3:+73002174 Msa0139350:CDS
ATTGACGTGACGGCGAGAGA+AGG 0.588228 1_3:-73002240 None:intergenic
ACTGTATGCAAATTGTAGGC+GGG 0.588325 1_3:+73003313 Msa0139350:CDS
GTATGAGATGTTGGAATCCA+CGG 0.589025 1_3:-73002106 None:intergenic
GGAAGATGCGATTGACGTGA+CGG 0.589585 1_3:-73002250 None:intergenic
GAAGTCGGTTAAGACAGGTC+TGG 0.591410 1_3:-73008960 None:intergenic
GGACTTGTTGGAACCAAAGA+GGG 0.592716 1_3:+73004146 Msa0139350:CDS
ACCTTAGAAATTATTGACAT+CGG 0.594571 1_3:+73004170 Msa0139350:CDS
ACTGTGATTACCAATTGAGA+AGG 0.595895 1_3:-73002273 None:intergenic
GCATGGCAAAGAGGCTACAG+AGG 0.596180 1_3:+73003686 Msa0139350:CDS
TTGTTGTTGTAGATTGCTGG+TGG 0.596677 1_3:+73002359 Msa0139350:intron
TGTGGATGGGGAGTCTGTAA+AGG 0.597183 1_3:+73003440 Msa0139350:CDS
AATGGAGATGCGGAGAACAA+AGG 0.597946 1_3:+73003717 Msa0139350:CDS
GATGGGGAGTCTGTAAAGGA+TGG 0.599140 1_3:+73003444 Msa0139350:CDS
TTATGTGTTTAGTGTCGGAA+AGG 0.600175 1_3:+73005942 Msa0139350:CDS
TGTATGGATATATCATCAGA+TGG 0.601371 1_3:+73005679 Msa0139350:CDS
GGATATGATCCATGGCTGCA+AGG 0.601974 1_3:-73009822 None:intergenic
GCACTTAGAACATAATCAGA+AGG 0.603480 1_3:-73007207 None:intergenic
AATGAATGATGATGTTCTTG+TGG 0.603575 1_3:+73004826 Msa0139350:CDS
TACACAGAACAGGCAGCTTG+TGG 0.607103 1_3:-73005660 None:intergenic
ACAAACCTGGATATGATCCA+TGG 0.607843 1_3:-73009830 None:intergenic
GAAGGAAGAAATACCAGAGG+AGG 0.611721 1_3:+73006439 Msa0139350:CDS
ATGACGCCGAACGAGGCCGA+CGG 0.612832 1_3:-73002078 None:intergenic
TACCAAATTAAGCAGAAACC+TGG 0.612981 1_3:+73004314 Msa0139350:CDS
AGGCCGACGGCTCGTATCGG+AGG 0.613902 1_3:-73002065 None:intergenic
GGAGCTGTCGTATGAGATGT+TGG 0.613973 1_3:-73002115 None:intergenic
GAGCTTCAATTGCTTCAACA+CGG 0.615221 1_3:-73004202 None:intergenic
TAAATTATTACTGATGCTGG+TGG 0.617793 1_3:+73010277 Msa0139350:three_prime_UTR
GATCCCAGCGGCGAATTGAG+CGG 0.618014 1_3:-73006092 None:intergenic
CAAAGCGTAAAGCCAAACGT+AGG 0.620404 1_3:+73003640 Msa0139350:CDS
GCTGCCTTGCCAGATAAACA+TGG 0.622045 1_3:+73004248 Msa0139350:CDS
CAAGTCCATACTTGTTAGTG+GGG 0.624870 1_3:-73004130 None:intergenic
CTTCGGCGTCATCCAACACA+CGG 0.626523 1_3:-73003617 None:intergenic
AGAGAAGAAGCATGGCAAAG+AGG 0.626627 1_3:+73003677 Msa0139350:CDS
AAGCAAAGATAGAGTTGCCA+CGG 0.629017 1_3:+73003530 Msa0139350:CDS
AAGCCATAAACCTCTAACTG+AGG 0.634623 1_3:+73002020 Msa0139350:five_prime_UTR
GGGAACTGAAAATGGAGATG+CGG 0.636136 1_3:+73003707 Msa0139350:CDS
GGAGGCGATGACGCCGAACG+AGG 0.636860 1_3:-73002085 None:intergenic
AAAGCGTAAAGCCAAACGTA+GGG 0.639491 1_3:+73003641 Msa0139350:CDS
TGGACTTGTTGGAACCAAAG+AGG 0.641769 1_3:+73004145 Msa0139350:CDS
TGGATGTTGATCCTGGTGAG+AGG 0.643191 1_3:+73003358 Msa0139350:CDS
GTAACAAGAAACCTCTCACC+AGG 0.643931 1_3:-73003369 None:intergenic
AAGGAAGAAATACCAGAGGA+GGG 0.645804 1_3:+73006440 Msa0139350:CDS
GTTCGGCGTCATCGCCTCCG+TGG 0.649223 1_3:+73002089 Msa0139350:CDS
GCGAGAGAAGGACCACGACA+CGG 0.656061 1_3:-73002228 None:intergenic
GCAACAGCAGTGTGCCTATG+CGG 0.658938 1_3:-73008901 None:intergenic
GGTGACCGGCCATTCATAAG+CGG 0.664360 1_3:-73007186 None:intergenic
TGTGATTACCAATTGAGAAG+GGG 0.669898 1_3:-73002271 None:intergenic
CATGGCAAAGAGGCTACAGA+GGG 0.677642 1_3:+73003687 Msa0139350:CDS
AAGCTCATGGAGGCTCTGTG+CGG 0.686772 1_3:+73004219 Msa0139350:CDS
TTACCTCCGATACGAGCCGT+CGG 0.698710 1_3:+73002062 Msa0139350:CDS
TGACACTTCGAACATCAGAA+CGG 0.699354 1_3:-73003983 None:intergenic
AGACTTGTTGAACTGGACCG+TGG 0.700792 1_3:-73003547 None:intergenic
TGTCTTGCAGTCAGTAATCG+TGG 0.709915 1_3:+73006042 Msa0139350:CDS
ATGAAGATATCAACTTTACG+AGG 0.719564 1_3:-73010227 None:intergenic
GAAGCAATTGAAGCTCATGG+AGG 0.741210 1_3:+73004209 Msa0139350:CDS
ACTGAAGGAAGAAATACCAG+AGG 0.762552 1_3:+73006436 Msa0139350:CDS
TGAGATGTTGGAATCCACGG+AGG 0.765681 1_3:-73002103 None:intergenic
GCTCTTCAGTACGATCCCAG+CGG 0.811107 1_3:-73006104 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTGAAAACTTAATTAA+GGG - chr1_3:73002900-73002919 None:intergenic 10.0%
!! ATAGAATATATAAATATAGT+AGG - chr1_3:73004671-73004690 None:intergenic 10.0%
!! TGATAAAAATATAAAGATTT+GGG + chr1_3:73005726-73005745 Msa0139350:CDS 10.0%
!! GATTAAAAAAAATAATTATC+AGG - chr1_3:73005818-73005837 None:intergenic 10.0%
!!! TAATAATTTTACTGATATTT+GGG - chr1_3:73006987-73007006 None:intergenic 10.0%
!!! ATTTTTTTATTTTACATTTC+AGG + chr1_3:73007122-73007141 Msa0139350:intron 10.0%
!! AATAAATCCTAATAAAAATT+AGG - chr1_3:73007424-73007443 None:intergenic 10.0%
!! GAACAAAAAAAAATTAAATA+GGG - chr1_3:73009252-73009271 None:intergenic 10.0%
!! AGAACAAAAAAAAATTAAAT+AGG - chr1_3:73009253-73009272 None:intergenic 10.0%
!!! TATTTTAATTTAATCCAATA+CGG + chr1_3:73010403-73010422 Msa0139350:three_prime_UTR 10.0%
!! CTAAATTGAAAACTTAATTA+AGG - chr1_3:73002901-73002920 None:intergenic 15.0%
!!! CTTAATTAAGTTTTCAATTT+AGG + chr1_3:73002899-73002918 Msa0139350:intron 15.0%
!! AACAAATATTTCTTGAAATA+GGG - chr1_3:73004356-73004375 None:intergenic 15.0%
!! AAACAAATATTTCTTGAAAT+AGG - chr1_3:73004357-73004376 None:intergenic 15.0%
!!! TTTTTTTATAAGGAAATACA+AGG + chr1_3:73004376-73004395 Msa0139350:intron 15.0%
!! AATATAAAACAGAAAAACTA+TGG - chr1_3:73004499-73004518 None:intergenic 15.0%
!!! AAATAGAAATTTTAAACACT+TGG + chr1_3:73004556-73004575 Msa0139350:intron 15.0%
!!! AATAGAAATTTTAAACACTT+GGG + chr1_3:73004557-73004576 Msa0139350:intron 15.0%
!!! AAAACTCATTAAGAAAATTT+TGG - chr1_3:73004944-73004963 None:intergenic 15.0%
!! CTGATAAAAATATAAAGATT+TGG + chr1_3:73005725-73005744 Msa0139350:CDS 15.0%
!! GATAAAAATATAAAGATTTG+GGG + chr1_3:73005727-73005746 Msa0139350:CDS 15.0%
!!! GTAATAATTTTACTGATATT+TGG - chr1_3:73006988-73007007 None:intergenic 15.0%
!! AAAAATTCTTCAATTCAATT+TGG + chr1_3:73007023-73007042 Msa0139350:intron 15.0%
!! AAAATTCTTCAATTCAATTT+GGG + chr1_3:73007024-73007043 Msa0139350:intron 15.0%
!!! ACTTTTCTTAATAATTTCAT+TGG + chr1_3:73007383-73007402 Msa0139350:intron 15.0%
!! CAATAATATTTACATCTATT+AGG - chr1_3:73007586-73007605 None:intergenic 15.0%
!! ATTCTTCGATTATAAATTTA+AGG - chr1_3:73008504-73008523 None:intergenic 15.0%
!! ATTTATAATCGAAGAATATA+AGG + chr1_3:73008507-73008526 Msa0139350:intron 15.0%
!! TTAACCAAATCTTAAAAAAT+CGG - chr1_3:73008816-73008835 None:intergenic 15.0%
!!! AATACCTTTTTTTCTAAAAT+AGG + chr1_3:73009334-73009353 Msa0139350:intron 15.0%
!!! ATACCTTTTTTTCTAAAATA+GGG + chr1_3:73009335-73009354 Msa0139350:intron 15.0%
!! TTTAAATTGTTCTATCCAAA+CGG - chr1_3:73002927-73002946 None:intergenic 20.0%
!! TACTCTCAAAAATTTATCTT+TGG - chr1_3:73003274-73003293 None:intergenic 20.0%
!!! AAGATAAATTTTTGAGAGTA+TGG + chr1_3:73003274-73003293 Msa0139350:CDS 20.0%
!!! AGATAAATTTTTGAGAGTAT+GGG + chr1_3:73003275-73003294 Msa0139350:CDS 20.0%
!!! ACTGTTTTATTTGTTTCTAT+GGG - chr1_3:73003768-73003787 None:intergenic 20.0%
!!! AACTGTTTTATTTGTTTCTA+TGG - chr1_3:73003769-73003788 None:intergenic 20.0%
!! GATGAAATACAATAAACAAA+AGG - chr1_3:73004462-73004481 None:intergenic 20.0%
!! TTTGTTTATTGTATTTCATC+TGG + chr1_3:73004462-73004481 Msa0139350:intron 20.0%
!!! ATACATATTTTACCATATGT+TGG + chr1_3:73005024-73005043 Msa0139350:intron 20.0%
!! TTTATAAATGTGTATGTGTA+TGG + chr1_3:73005277-73005296 Msa0139350:intron 20.0%
!! AACAAGATCAAAATTCAATT+GGG - chr1_3:73005519-73005538 None:intergenic 20.0%
!! AAACAAGATCAAAATTCAAT+TGG - chr1_3:73005520-73005539 None:intergenic 20.0%
!!! ATTGAATTTTGATCTTGTTT+TGG + chr1_3:73005520-73005539 Msa0139350:intron 20.0%
!!! TTAATCTCTTTTATTCATCA+AGG + chr1_3:73005832-73005851 Msa0139350:intron 20.0%
!! CAATATATCAGTTTAGAAAA+CGG - chr1_3:73006604-73006623 None:intergenic 20.0%
!!! TTTTTATTTTACATTTCAGG+AGG + chr1_3:73007125-73007144 Msa0139350:intron 20.0%
!!! TATATTTCTGCATAAGAATT+GGG - chr1_3:73007308-73007327 None:intergenic 20.0%
!!! TTATATTTCTGCATAAGAAT+TGG - chr1_3:73007309-73007328 None:intergenic 20.0%
!!! AAACCTACCTAATTTTTATT+AGG + chr1_3:73007414-73007433 Msa0139350:intron 20.0%
!! AATCCTAATAAAAATTAGGT+AGG - chr1_3:73007420-73007439 None:intergenic 20.0%
!! GATATTTAACATAATAGAGT+TGG - chr1_3:73007501-73007520 None:intergenic 20.0%
!! TTACATCTATTAGGTTAATT+TGG - chr1_3:73007577-73007596 None:intergenic 20.0%
!! AACATTGATCATAAGTTAAA+GGG + chr1_3:73007914-73007933 Msa0139350:intron 20.0%
!!! CTTTTCTGTATAAAAAAACT+TGG + chr1_3:73008361-73008380 Msa0139350:intron 20.0%
!! TAATATGAACAAACATTCTT+TGG - chr1_3:73008395-73008414 None:intergenic 20.0%
!! GGAAAAACATAACTAAAATT+AGG - chr1_3:73008600-73008619 None:intergenic 20.0%
!! ATTATTACAAGAGAAATACA+CGG - chr1_3:73008782-73008801 None:intergenic 20.0%
!!! AGTTTGAACCTTTTTTTTTA+GGG + chr1_3:73009178-73009197 Msa0139350:intron 20.0%
!! ATATGTAACCCTAAAAAAAA+AGG - chr1_3:73009189-73009208 None:intergenic 20.0%
!! TTAGTCCCTATAATAAAATT+GGG - chr1_3:73009377-73009396 None:intergenic 20.0%
!! ACTAACAATATATTTAACCA+AGG + chr1_3:73009392-73009411 Msa0139350:intron 20.0%
!! CTAACAATATATTTAACCAA+GGG + chr1_3:73009393-73009412 Msa0139350:intron 20.0%
!! TAACAATATATTTAACCAAG+GGG + chr1_3:73009394-73009413 Msa0139350:intron 20.0%
!! AAACTATAAGAGAAACTATT+AGG + chr1_3:73009607-73009626 Msa0139350:intron 20.0%
!! TATATATATATATTCCAGTG+AGG - chr1_3:73010114-73010133 None:intergenic 20.0%
!! TATTAAATTATTACTGATGC+TGG + chr1_3:73010274-73010293 Msa0139350:three_prime_UTR 20.0%
!! ACATTAAAATTTCTCAGAAA+AGG + chr1_3:73010339-73010358 Msa0139350:intron 20.0%
! GAATTTACGATTTCCTTTAA+CGG + chr1_3:73002319-73002338 Msa0139350:intron 25.0%
!!! AAGATAACGATGTTATTTTG+TGG + chr1_3:73002513-73002532 Msa0139350:CDS 25.0%
!!! AGATAACGATGTTATTTTGT+GGG + chr1_3:73002514-73002533 Msa0139350:CDS 25.0%
! TTAAATTGTTCTATCCAAAC+GGG - chr1_3:73002926-73002945 None:intergenic 25.0%
! CTTGCTTGATTGAATAAAAA+CGG - chr1_3:73003416-73003435 None:intergenic 25.0%
! CTCGATTAGATTATTGTTTA+AGG - chr1_3:73003904-73003923 None:intergenic 25.0%
!!! ATCAATACCAAGTGTTTTTT+TGG - chr1_3:73003952-73003971 None:intergenic 25.0%
! ACCTTAGAAATTATTGACAT+CGG + chr1_3:73004170-73004189 Msa0139350:CDS 25.0%
!! AAGATCATGATGTAAAGTTT+TGG + chr1_3:73004288-73004307 Msa0139350:CDS 25.0%
!! AGATCATGATGTAAAGTTTT+GGG + chr1_3:73004289-73004308 Msa0139350:CDS 25.0%
!! AGTCATTCTTATTTAATACG+TGG + chr1_3:73004692-73004711 Msa0139350:intron 25.0%
! TTATTAACACTACTTGTCTT+TGG + chr1_3:73004915-73004934 Msa0139350:intron 25.0%
!!! TTTTTGGGGACTATAATAAT+TGG + chr1_3:73005153-73005172 Msa0139350:intron 25.0%
! ATTGACAACTTTACTGAATA+TGG + chr1_3:73005186-73005205 Msa0139350:intron 25.0%
!! TTTCTGAAAAAAGTTAGAAG+CGG + chr1_3:73005311-73005330 Msa0139350:intron 25.0%
! TTAAAAGAATTGTGTATCAC+TGG - chr1_3:73005378-73005397 None:intergenic 25.0%
! GAGAAATAAATGAACCAATT+TGG - chr1_3:73005438-73005457 None:intergenic 25.0%
!! AAATAATGCAAGAGTATAAG+AGG - chr1_3:73005551-73005570 None:intergenic 25.0%
! AAATTCTTCCTTTCATTGTA+TGG + chr1_3:73005637-73005656 Msa0139350:CDS 25.0%
!! AAATATAAAGATTTGGGGTT+TGG + chr1_3:73005732-73005751 Msa0139350:CDS 25.0%
!!! CAATTTACTTTTCAGTGTTA+TGG + chr1_3:73005894-73005913 Msa0139350:intron 25.0%
!!! TATGCATAACTTTTAGGTTA+TGG + chr1_3:73006142-73006161 Msa0139350:intron 25.0%
! TGTTAATGTGAATTGTTTGT+TGG + chr1_3:73006296-73006315 Msa0139350:intron 25.0%
!!! CGATAAATCATTTTAATTGC+AGG + chr1_3:73006343-73006362 Msa0139350:intron 25.0%
!!! ATTTTAATTGCAGGAAGAAA+AGG + chr1_3:73006352-73006371 Msa0139350:intron 25.0%
! TAGTAATTCTTTGCAAAACA+TGG + chr1_3:73006701-73006720 Msa0139350:intron 25.0%
! TTGGTGCATTCTAATTTATT+TGG - chr1_3:73006746-73006765 None:intergenic 25.0%
! GATAGCAGTAGTTAATTAAT+AGG - chr1_3:73006849-73006868 None:intergenic 25.0%
!!! GTCTTGTTTATAAGGAATAA+AGG - chr1_3:73007451-73007470 None:intergenic 25.0%
!!! TCATCATAGTCTTGTTTATA+AGG - chr1_3:73007459-73007478 None:intergenic 25.0%
! TATAAACAAGACTATGATGA+AGG + chr1_3:73007459-73007478 Msa0139350:intron 25.0%
! CTCTATTATGTTAAATATCC+TGG + chr1_3:73007502-73007521 Msa0139350:intron 25.0%
! TGTAAATATTATTGTGCTCA+AGG + chr1_3:73007592-73007611 Msa0139350:intron 25.0%
! GTAAATATTATTGTGCTCAA+GGG + chr1_3:73007593-73007612 Msa0139350:intron 25.0%
! GGTATTTAACATAATAGAGT+CGG + chr1_3:73007614-73007633 Msa0139350:intron 25.0%
! CAACATTGATCATAAGTTAA+AGG + chr1_3:73007913-73007932 Msa0139350:intron 25.0%
! ACATTGATCATAAGTTAAAG+GGG + chr1_3:73007915-73007934 Msa0139350:intron 25.0%
!! AATAAGCATTTTGCAATACT+AGG + chr1_3:73008074-73008093 Msa0139350:intron 25.0%
! AACATAACTAAAATTAGGTC+AGG - chr1_3:73008595-73008614 None:intergenic 25.0%
! CAAGTTTAATGTATTTATGC+AGG + chr1_3:73008653-73008672 Msa0139350:intron 25.0%
!! TTTTGTCATACTTGAAAGAA+TGG + chr1_3:73008703-73008722 Msa0139350:CDS 25.0%
!!! ATAGCCGATTTTTTAAGATT+TGG + chr1_3:73008809-73008828 Msa0139350:intron 25.0%
!!! CAATGTTTTGATAACTTGAT+TGG + chr1_3:73009054-73009073 Msa0139350:intron 25.0%
! ATGTGAAAACTATTGAAAGT+AGG + chr1_3:73009124-73009143 Msa0139350:intron 25.0%
! CTAAAAAAAAAGGTTCAAAC+TGG - chr1_3:73009179-73009198 None:intergenic 25.0%
!!! CAGTTTGAACCTTTTTTTTT+AGG + chr1_3:73009177-73009196 Msa0139350:intron 25.0%
!!! ATTTTTTGTCCCTACAAAAT+TGG + chr1_3:73009209-73009228 Msa0139350:intron 25.0%
!!! TTTTTTGTCCCTACAAAATT+GGG + chr1_3:73009210-73009229 Msa0139350:intron 25.0%
!!! AGTCCCTATTTTAGAAAAAA+AGG - chr1_3:73009341-73009360 None:intergenic 25.0%
!! AAGGTCCCAATTTTATTATA+GGG + chr1_3:73009369-73009388 Msa0139350:intron 25.0%
! GTTAGTCCCTATAATAAAAT+TGG - chr1_3:73009378-73009397 None:intergenic 25.0%
! AACAATATATTTAACCAAGG+GGG + chr1_3:73009395-73009414 Msa0139350:intron 25.0%
! AACTATTAGGAAAGATTTAG+AGG + chr1_3:73009620-73009639 Msa0139350:intron 25.0%
! AGATTTAGAGGTTAATGAAT+TGG + chr1_3:73009632-73009651 Msa0139350:intron 25.0%
! TAATGAATTGGATCCAAAAA+TGG + chr1_3:73009644-73009663 Msa0139350:intron 25.0%
!! GTTCTATCATAAACCATTTT+TGG - chr1_3:73009660-73009679 None:intergenic 25.0%
!! TTCAAACAAGAATTTTGTCA+AGG - chr1_3:73009765-73009784 None:intergenic 25.0%
!! AGATTCTTTTTATACAAACC+TGG - chr1_3:73009846-73009865 None:intergenic 25.0%
! CATTGATAGAAAAGCTAATT+CGG + chr1_3:73009883-73009902 Msa0139350:intron 25.0%
! TTATCATTCTCTTTCACTAA+AGG - chr1_3:73010181-73010200 None:intergenic 25.0%
!! AAAATTTTTACTCACCAACA+GGG - chr1_3:73010449-73010468 None:intergenic 25.0%
! AGGGTTTATGTTTCTGAATT+CGG - chr1_3:73001994-73002013 None:intergenic 30.0%
AAGAACTGTTAAACCGTTAA+AGG - chr1_3:73002335-73002354 None:intergenic 30.0%
ACTTGTGAAACTACTTTGAA+TGG + chr1_3:73002425-73002444 Msa0139350:CDS 30.0%
ACTACTTTGAATGGACATAA+AGG + chr1_3:73002434-73002453 Msa0139350:CDS 30.0%
GAATTGAAGAAGAGTAAAAG+AGG - chr1_3:73002593-73002612 None:intergenic 30.0%
ATTAAACTGTTAGTCCAAAC+GGG - chr1_3:73002639-73002658 None:intergenic 30.0%
GATTAAACTGTTAGTCCAAA+CGG - chr1_3:73002640-73002659 None:intergenic 30.0%
ATGAAAACAACGTATAGCTT+AGG - chr1_3:73002743-73002762 None:intergenic 30.0%
TAAATTGTTCTATCCAAACG+GGG - chr1_3:73002925-73002944 None:intergenic 30.0%
AAATAAGTGCTTATAGCGTA+AGG + chr1_3:73002944-73002963 Msa0139350:intron 30.0%
AATAAGTGCTTATAGCGTAA+GGG + chr1_3:73002945-73002964 Msa0139350:intron 30.0%
TAAGCTCTATAGAATAGCTT+AGG - chr1_3:73003067-73003086 None:intergenic 30.0%
!!! ATGTTGTTTTTGTTGGTTCT+GGG + chr1_3:73003229-73003248 Msa0139350:CDS 30.0%
TCATAGTGAAATTTGGACAT+TGG + chr1_3:73003338-73003357 Msa0139350:CDS 30.0%
ATTCTTCCGTTTCAAACAAA+TGG + chr1_3:73003472-73003491 Msa0139350:CDS 30.0%
TTCTTCCGTTTCAAACAAAT+GGG + chr1_3:73003473-73003492 Msa0139350:CDS 30.0%
AACATCCCATTTGTTTGAAA+CGG - chr1_3:73003481-73003500 None:intergenic 30.0%
!!! CATGCTTCTTCTCTTTTTTA+CGG - chr1_3:73003671-73003690 None:intergenic 30.0%
GATAATTCTATTGTGACTGA+TGG + chr1_3:73003741-73003760 Msa0139350:CDS 30.0%
CAGTTTAAAAACATCAGGTA+CGG - chr1_3:73003793-73003812 None:intergenic 30.0%
TGCAACAGTTTAAAAACATC+AGG - chr1_3:73003798-73003817 None:intergenic 30.0%
!! TATTTTTACTGCATTGTGAC+TGG - chr1_3:73004042-73004061 None:intergenic 30.0%
GTCACAATGCAGTAAAAATA+TGG + chr1_3:73004042-73004061 Msa0139350:CDS 30.0%
TCCGATGTCAATAATTTCTA+AGG - chr1_3:73004174-73004193 None:intergenic 30.0%
CTGTATGTGAAGTGAAAAAA+AGG - chr1_3:73004407-73004426 None:intergenic 30.0%
AACACTAATTGTTCTGTTTC+AGG + chr1_3:73004763-73004782 Msa0139350:intron 30.0%
! AATGAATGATGATGTTCTTG+TGG + chr1_3:73004826-73004845 Msa0139350:CDS 30.0%
!!! AGCTTGCATAGATTGTTTTT+TGG + chr1_3:73005137-73005156 Msa0139350:intron 30.0%
!!! GCTTGCATAGATTGTTTTTT+GGG + chr1_3:73005138-73005157 Msa0139350:intron 30.0%
!!! CTTGCATAGATTGTTTTTTG+GGG + chr1_3:73005139-73005158 Msa0139350:intron 30.0%
GTGTATGTGTATGGATAAAT+TGG + chr1_3:73005286-73005305 Msa0139350:intron 30.0%
!!! GCTTCTAACTTTTTTCAGAA+AGG - chr1_3:73005312-73005331 None:intergenic 30.0%
GAAATGCCAATTTCAAAGTA+TGG + chr1_3:73005477-73005496 Msa0139350:intron 30.0%
!!! GAATTTTGATCTTGTTTTGG+TGG + chr1_3:73005523-73005542 Msa0139350:intron 30.0%
TGTATGGATATATCATCAGA+TGG + chr1_3:73005679-73005698 Msa0139350:CDS 30.0%
! CTTTTATTCATCAAGGAGTA+TGG + chr1_3:73005839-73005858 Msa0139350:intron 30.0%
CTAAACACATAATGTGTCTT+GGG - chr1_3:73005934-73005953 None:intergenic 30.0%
ACTAAACACATAATGTGTCT+TGG - chr1_3:73005935-73005954 None:intergenic 30.0%
ACACATTATGTGTTTAGTGT+CGG + chr1_3:73005937-73005956 Msa0139350:CDS 30.0%
! TTGAGGTATGCATAACTTTT+AGG + chr1_3:73006136-73006155 Msa0139350:intron 30.0%
AAATGTGAATGAATACCCTA+AGG + chr1_3:73006215-73006234 Msa0139350:intron 30.0%
TTCTTTAAGCAATGTCCTTA+GGG - chr1_3:73006233-73006252 None:intergenic 30.0%
ATTCTTTAAGCAATGTCCTT+AGG - chr1_3:73006234-73006253 None:intergenic 30.0%
CTCAATAATTAAGTCTGTAG+CGG - chr1_3:73006507-73006526 None:intergenic 30.0%
GCAAAACATGGATATCAATT+TGG + chr1_3:73006713-73006732 Msa0139350:intron 30.0%
GTGCATTCTAATTTATTTGG+AGG - chr1_3:73006743-73006762 None:intergenic 30.0%
! TTGATGGAACAATTTGTTTG+GGG - chr1_3:73006783-73006802 None:intergenic 30.0%
! CTTGATGGAACAATTTGTTT+GGG - chr1_3:73006784-73006803 None:intergenic 30.0%
GAAAATTGTTCCAATTTCAC+AGG - chr1_3:73006817-73006836 None:intergenic 30.0%
TTACGAAACAAGATACAAGA+CGG - chr1_3:73007081-73007100 None:intergenic 30.0%
!! TTATTTTACATTTCAGGAGG+AGG + chr1_3:73007128-73007147 Msa0139350:intron 30.0%
!!! CAATAAAAATGCTGTTTTCC+AGG + chr1_3:73007158-73007177 Msa0139350:CDS 30.0%
TGCAGAAATATAACACATGT+CGG + chr1_3:73007316-73007335 Msa0139350:intron 30.0%
GACTATGATGAAGGTTAATA+TGG + chr1_3:73007468-73007487 Msa0139350:intron 30.0%
GTATGTGTATGTGTGATTTA+TGG + chr1_3:73007831-73007850 Msa0139350:intron 30.0%
AATTTGCAGTATCTGTGATT+AGG + chr1_3:73007957-73007976 Msa0139350:intron 30.0%
AATAAGCATCTTGCAATACT+CGG + chr1_3:73008007-73008026 Msa0139350:intron 30.0%
TAGTAACAGGGTTTAGAAAA+GGG - chr1_3:73008335-73008354 None:intergenic 30.0%
! TTTTCTAAACCCTGTTACTA+GGG + chr1_3:73008335-73008354 Msa0139350:intron 30.0%
ATGGACTTCATATTCTGATA+AGG + chr1_3:73008722-73008741 Msa0139350:CDS 30.0%
AATCTATTCATGATAACTGC+AGG + chr1_3:73008865-73008884 Msa0139350:intron 30.0%
ATAGAAAATGTCACTGAAGT+CGG - chr1_3:73008978-73008997 None:intergenic 30.0%
!! TTTTGATAACTTGATTGGAC+CGG + chr1_3:73009059-73009078 Msa0139350:intron 30.0%
! TTTTTGTCCCTACAAAATTG+GGG + chr1_3:73009211-73009230 Msa0139350:intron 30.0%
AAATAGGGACTAAACATGAA+AGG - chr1_3:73009237-73009256 None:intergenic 30.0%
TATCCATTTCCTACAACATT+AGG + chr1_3:73009278-73009297 Msa0139350:intron 30.0%
TTTCCTAATGTTGTAGGAAA+TGG - chr1_3:73009284-73009303 None:intergenic 30.0%
TATGCATTTCCTAATGTTGT+AGG - chr1_3:73009290-73009309 None:intergenic 30.0%
ATGCATAAGAAATAGATACG+AGG + chr1_3:73009303-73009322 Msa0139350:intron 30.0%
! TCTAAAATAGGGACTAAACT+TGG + chr1_3:73009346-73009365 Msa0139350:intron 30.0%
! GAAGGTCCCAATTTTATTAT+AGG + chr1_3:73009368-73009387 Msa0139350:intron 30.0%
AGTACGAATAGTAGATCAAA+TGG + chr1_3:73009546-73009565 Msa0139350:intron 30.0%
!!! CGAATTAGCTTTTCTATCAA+TGG - chr1_3:73009885-73009904 None:intergenic 30.0%
AATCCAAACGTTTACAAGAT+AGG + chr1_3:73009998-73010017 Msa0139350:CDS 30.0%
AAAGTAATCTGTCAGTGATA+TGG + chr1_3:73010062-73010081 Msa0139350:exon 30.0%
AAGTAATCTGTCAGTGATAT+GGG + chr1_3:73010063-73010082 Msa0139350:exon 30.0%
ATGAAGATATCAACTTTACG+AGG - chr1_3:73010230-73010249 None:intergenic 30.0%
!! ATCTTCATTTTTGAGAAGCA+AGG + chr1_3:73010242-73010261 Msa0139350:three_prime_UTR 30.0%
TAAATTATTACTGATGCTGG+TGG + chr1_3:73010277-73010296 Msa0139350:three_prime_UTR 30.0%
AAAATTTCTCAGAAAAGGTC+AGG + chr1_3:73010344-73010363 Msa0139350:intron 30.0%
AAATTTCTCAGAAAAGGTCA+GGG + chr1_3:73010345-73010364 Msa0139350:intron 30.0%
! GAAAATTTTTACTCACCAAC+AGG - chr1_3:73010450-73010469 None:intergenic 30.0%
TGTGATTACCAATTGAGAAG+GGG - chr1_3:73002274-73002293 None:intergenic 35.0%
CTGTGATTACCAATTGAGAA+GGG - chr1_3:73002275-73002294 None:intergenic 35.0%
ACTGTGATTACCAATTGAGA+AGG - chr1_3:73002276-73002295 None:intergenic 35.0%
! TTGTTGTTGTTGTAGATTGC+TGG + chr1_3:73002356-73002375 Msa0139350:intron 35.0%
GCTCTTCGTTATAATAAGCT+TGG + chr1_3:73002467-73002486 Msa0139350:CDS 35.0%
!! GTTATTTTGTGGGATGTTGT+TGG + chr1_3:73002524-73002543 Msa0139350:CDS 35.0%
! GTTTTCAATTTAGACCCGTT+TGG + chr1_3:73002622-73002641 Msa0139350:intron 35.0%
! ATTAAGGGCATGTTCAGATT+TGG - chr1_3:73002885-73002904 None:intergenic 35.0%
GAAACAACTTATACCTCATG+TGG - chr1_3:73003045-73003064 None:intergenic 35.0%
AGACTATTTGAAAGAGCTGA+TGG - chr1_3:73003105-73003124 None:intergenic 35.0%
ACTTATTTGATCTCACCTAC+TGG - chr1_3:73003142-73003161 None:intergenic 35.0%
AAGTCAATTCAAACAGAGCT+TGG + chr1_3:73003158-73003177 Msa0139350:intron 35.0%
AACGAGTTTGTGTTCATTTG+TGG + chr1_3:73003196-73003215 Msa0139350:intron 35.0%
!!! GTGACTGATGTTGTTTTTGT+TGG + chr1_3:73003222-73003241 Msa0139350:CDS 35.0%
!!! GATGTTGTTTTTGTTGGTTC+TGG + chr1_3:73003228-73003247 Msa0139350:CDS 35.0%
TTCAATCAAGCAAGATTCTG+TGG + chr1_3:73003422-73003441 Msa0139350:CDS 35.0%
CGTAAAAAAGAGAAGAAGCA+TGG + chr1_3:73003669-73003688 Msa0139350:CDS 35.0%
AGTGGTTGGACAAAAAGAAA+TGG - chr1_3:73003850-73003869 None:intergenic 35.0%
AGAGTTGCTAGTGAATTCTT+CGG - chr1_3:73003873-73003892 None:intergenic 35.0%
! TTTGGTTTCACCACTTTCAA+TGG - chr1_3:73003934-73003953 None:intergenic 35.0%
GGTGAAACCAAAAAAACACT+TGG + chr1_3:73003942-73003961 Msa0139350:CDS 35.0%
!! ACACTTGGTATTGATCTTGA+AGG + chr1_3:73003957-73003976 Msa0139350:CDS 35.0%
AAAATATGGAATCCAAGCAC+TGG + chr1_3:73004056-73004075 Msa0139350:CDS 35.0%
! ACAAGTCCATACTTGTTAGT+GGG - chr1_3:73004134-73004153 None:intergenic 35.0%
! AACAAGTCCATACTTGTTAG+TGG - chr1_3:73004135-73004154 None:intergenic 35.0%
ACTAACAAGTATGGACTTGT+TGG + chr1_3:73004134-73004153 Msa0139350:CDS 35.0%
!! AATTTCTAAGGTTCCCTCTT+TGG - chr1_3:73004162-73004181 None:intergenic 35.0%
TACCAAATTAAGCAGAAACC+TGG + chr1_3:73004314-73004333 Msa0139350:CDS 35.0%
TGATAGCATACGTAAACGTA+TGG + chr1_3:73004432-73004451 Msa0139350:intron 35.0%
!! TTGATCTCTAGAACTAGAAG+TGG + chr1_3:73004518-73004537 Msa0139350:intron 35.0%
! CATAGTCTTGACATTTGACA+CGG - chr1_3:73004804-73004823 None:intergenic 35.0%
AACAGCGATATATTTGGCAT+CGG - chr1_3:73004864-73004883 None:intergenic 35.0%
TCTGTTGGATAGTACTGTTA+AGG + chr1_3:73004886-73004905 Msa0139350:CDS 35.0%
!!! TGCATTTTGAGGTTGAAAAG+TGG - chr1_3:73004992-73005011 None:intergenic 35.0%
! CATTGACAACATGCATTTTG+AGG - chr1_3:73005003-73005022 None:intergenic 35.0%
TTTACCATATGTTGGCAATC+TGG + chr1_3:73005032-73005051 Msa0139350:intron 35.0%
TTACCATATGTTGGCAATCT+GGG + chr1_3:73005033-73005052 Msa0139350:intron 35.0%
TTGTAGATTTGAGTGAAGCT+TGG + chr1_3:73005084-73005103 Msa0139350:intron 35.0%
TGTAGATTTGAGTGAAGCTT+GGG + chr1_3:73005085-73005104 Msa0139350:intron 35.0%
TTACTGAATATGGCCTAGTT+TGG + chr1_3:73005196-73005215 Msa0139350:intron 35.0%
CCAATTTGGATAAACTTCTC+AGG - chr1_3:73005424-73005443 None:intergenic 35.0%
CCTGAGAAGTTTATCCAAAT+TGG + chr1_3:73005421-73005440 Msa0139350:intron 35.0%
CTCATTACGCTACATCTAAT+AGG + chr1_3:73005455-73005474 Msa0139350:intron 35.0%
TCAATTGGGAACATACAGAT+GGG - chr1_3:73005505-73005524 None:intergenic 35.0%
TTCAATTGGGAACATACAGA+TGG - chr1_3:73005506-73005525 None:intergenic 35.0%
GATATATCCATACACAGAAC+AGG - chr1_3:73005673-73005692 None:intergenic 35.0%
GATGGAGATTTAATTGTGAC+TGG + chr1_3:73005697-73005716 Msa0139350:CDS 35.0%
!! AAGATTTGGGGTTTGGATTT+TGG + chr1_3:73005739-73005758 Msa0139350:CDS 35.0%
! TTATGTGTTTAGTGTCGGAA+AGG + chr1_3:73005942-73005961 Msa0139350:CDS 35.0%
AAGGACATCATGCAGATATT+TGG + chr1_3:73006019-73006038 Msa0139350:CDS 35.0%
! TGAAGAGCAGTTTTTCATTG+AGG + chr1_3:73006119-73006138 Msa0139350:CDS 35.0%
TTTGCCATTGTAAGAGACAA+TGG - chr1_3:73006198-73006217 None:intergenic 35.0%
TGGTAAAAGACTTAGTTCAC+TGG + chr1_3:73006316-73006335 Msa0139350:intron 35.0%
AGAAAAGGAGAAAAGGTTAG+AGG + chr1_3:73006367-73006386 Msa0139350:CDS 35.0%
TGAAAGCAATTATGCACTGA+AGG + chr1_3:73006421-73006440 Msa0139350:CDS 35.0%
AATTAAGTCTGTAGCGGTAA+GGG - chr1_3:73006501-73006520 None:intergenic 35.0%
TAATTAAGTCTGTAGCGGTA+AGG - chr1_3:73006502-73006521 None:intergenic 35.0%
TGTCTCATAAGTAAATCTGC+AGG + chr1_3:73006622-73006641 Msa0139350:intron 35.0%
GTCTCTTAAGCAGATTATAC+AGG - chr1_3:73006676-73006695 None:intergenic 35.0%
! GCTTGATGGAACAATTTGTT+TGG - chr1_3:73006785-73006804 None:intergenic 35.0%
! CAATTTGAAGCCTGTGAAAT+TGG + chr1_3:73006804-73006823 Msa0139350:intron 35.0%
! TCAATGGGGTTCAATGTTTT+GGG - chr1_3:73006951-73006970 None:intergenic 35.0%
CTAGATAACTAAAAGAGCTG+AGG + chr1_3:73007051-73007070 Msa0139350:intron 35.0%
! GTCTTGTATCTTGTTTCGTA+AGG + chr1_3:73007080-73007099 Msa0139350:intron 35.0%
GCACTTAGAACATAATCAGA+AGG - chr1_3:73007210-73007229 None:intergenic 35.0%
AGATGTTCACTCGAATGATT+TGG + chr1_3:73007236-73007255 Msa0139350:CDS 35.0%
! TGATTTGGAGCAAACATTGT+TGG + chr1_3:73007251-73007270 Msa0139350:CDS 35.0%
GCAAACATTGTTGGTATGTT+TGG + chr1_3:73007260-73007279 Msa0139350:intron 35.0%
ACATGTCGGACTAATTTCTT+TGG + chr1_3:73007330-73007349 Msa0139350:intron 35.0%
CATGTCGGACTAATTTCTTT+GGG + chr1_3:73007331-73007350 Msa0139350:intron 35.0%
CAGTATCTGTGATTAGGTAT+AGG + chr1_3:73007963-73007982 Msa0139350:intron 35.0%
CAATACTAGGATGTCAATAG+CGG + chr1_3:73008087-73008106 Msa0139350:intron 35.0%
TGTCAATCATGGATAGATGA+AGG - chr1_3:73008252-73008271 None:intergenic 35.0%
TTAGCATGCATTTACAAGCT+AGG - chr1_3:73008276-73008295 None:intergenic 35.0%
! ATTGAGGGTGGATTTATTGT+AGG - chr1_3:73008304-73008323 None:intergenic 35.0%
TACAATAAATCCACCCTCAA+TGG + chr1_3:73008303-73008322 Msa0139350:intron 35.0%
CTAGTAACAGGGTTTAGAAA+AGG - chr1_3:73008336-73008355 None:intergenic 35.0%
! CTTTTCTAAACCCTGTTACT+AGG + chr1_3:73008334-73008353 Msa0139350:intron 35.0%
! AAATGCTTCTGCTTTCTAGT+GGG - chr1_3:73008572-73008591 None:intergenic 35.0%
! AGCTTCAAAGCATCTGAAAA+AGG - chr1_3:73008684-73008703 None:intergenic 35.0%
! CATTTTCTATGAGAGAGTCA+AGG + chr1_3:73008988-73009007 Msa0139350:CDS 35.0%
TCAAGGTAAATATGCAAACG+AGG + chr1_3:73009005-73009024 Msa0139350:intron 35.0%
TAAATATGCAAACGAGGTCA+AGG + chr1_3:73009011-73009030 Msa0139350:intron 35.0%
AAATTGTTTGAGTGACTGAC+TGG - chr1_3:73009103-73009122 None:intergenic 35.0%
TAGGAATCACCCATTAAAAG+AGG + chr1_3:73009143-73009162 Msa0139350:intron 35.0%
! ACTTAGCCACCTCTTTTAAT+GGG - chr1_3:73009155-73009174 None:intergenic 35.0%
! TACTTAGCCACCTCTTTTAA+TGG - chr1_3:73009156-73009175 None:intergenic 35.0%
AAATAGGGACTAAACTTGGA+AGG + chr1_3:73009350-73009369 Msa0139350:intron 35.0%
TCTACATGTCTTCTCTGTAT+AGG - chr1_3:73009520-73009539 None:intergenic 35.0%
ACGAATAGTAGATCAAATGG+AGG + chr1_3:73009549-73009568 Msa0139350:intron 35.0%
! TGGTTGTTGTTGTACTCTTA+TGG + chr1_3:73009732-73009751 Msa0139350:intron 35.0%
! TCTTGTTTGAACCTTGTATC+AGG + chr1_3:73009774-73009793 Msa0139350:intron 35.0%
CTTGTTTGAACCTTGTATCA+GGG + chr1_3:73009775-73009794 Msa0139350:intron 35.0%
AATGATCTTTCAGCAACTGA+TGG + chr1_3:73009912-73009931 Msa0139350:intron 35.0%
TGACCTATCTTGTAAACGTT+TGG - chr1_3:73010004-73010023 None:intergenic 35.0%
TTACAAGATAGGTCAGATAC+TGG + chr1_3:73010009-73010028 Msa0139350:CDS 35.0%
ATGAGCAAAATTAACCTCAC+TGG + chr1_3:73010097-73010116 Msa0139350:three_prime_UTR 35.0%
GTTAGAGGTTTATGGCTTCA+GGG - chr1_3:73002018-73002037 None:intergenic 40.0%
AGTTAGAGGTTTATGGCTTC+AGG - chr1_3:73002019-73002038 None:intergenic 40.0%
AAGCCATAAACCTCTAACTG+AGG + chr1_3:73002020-73002039 Msa0139350:five_prime_UTR 40.0%
GTATGAGATGTTGGAATCCA+CGG - chr1_3:73002109-73002128 None:intergenic 40.0%
! TTGTTGTTGTAGATTGCTGG+TGG + chr1_3:73002359-73002378 Msa0139350:intron 40.0%
TTGTAGATTGCTGGTGGTTA+TGG + chr1_3:73002365-73002384 Msa0139350:intron 40.0%
!! GTTATGGTGATGGCAGTATA+AGG + chr1_3:73002381-73002400 Msa0139350:CDS 40.0%
TGATGGCAGTATAAGGCTTT+GGG + chr1_3:73002388-73002407 Msa0139350:CDS 40.0%
AAGCTCTACCAAATAGTCTG+CGG + chr1_3:73002829-73002848 Msa0139350:intron 40.0%
! TTTTCAATTTAGGCCCCGTT+TGG + chr1_3:73002909-73002928 Msa0139350:intron 40.0%
ATTCGAACAGTTTCCACATG+AGG + chr1_3:73003029-73003048 Msa0139350:intron 40.0%
AGTTTGTGTTCATTTGTGGC+AGG + chr1_3:73003200-73003219 Msa0139350:intron 40.0%
CAGCACTGTATGCAAATTGT+AGG + chr1_3:73003309-73003328 Msa0139350:CDS 40.0%
CACTGTATGCAAATTGTAGG+CGG + chr1_3:73003312-73003331 Msa0139350:CDS 40.0%
ACTGTATGCAAATTGTAGGC+GGG + chr1_3:73003313-73003332 Msa0139350:CDS 40.0%
TGGTGAGAGGTTTCTTGTTA+CGG + chr1_3:73003371-73003390 Msa0139350:CDS 40.0%
ATCAAGCAAGATTCTGTGGA+TGG + chr1_3:73003426-73003445 Msa0139350:CDS 40.0%
TCAAGCAAGATTCTGTGGAT+GGG + chr1_3:73003427-73003446 Msa0139350:CDS 40.0%
!!! TGGGATGTTTTGACGCATTT+TGG + chr1_3:73003492-73003511 Msa0139350:CDS 40.0%
AAGCAAAGATAGAGTTGCCA+CGG + chr1_3:73003530-73003549 Msa0139350:CDS 40.0%
GGTAGAAATATTCCGTGTGT+TGG + chr1_3:73003605-73003624 Msa0139350:CDS 40.0%
!! TTTGGCTTTACGCTTTGCTT+CGG - chr1_3:73003637-73003656 None:intergenic 40.0%
AAAGCGTAAAGCCAAACGTA+GGG + chr1_3:73003641-73003660 Msa0139350:CDS 40.0%
TTTACGGTTAACCCTACGTT+TGG - chr1_3:73003655-73003674 None:intergenic 40.0%
GAGTTCTACTCCATTGAAAG+TGG + chr1_3:73003921-73003940 Msa0139350:CDS 40.0%
TGACACTTCGAACATCAGAA+CGG - chr1_3:73003986-73004005 None:intergenic 40.0%
! TCGAAGTGTCACACTTAGTT+CGG + chr1_3:73003995-73004014 Msa0139350:CDS 40.0%
AGAATCAATGGTCCTTAAGC+AGG - chr1_3:73004084-73004103 None:intergenic 40.0%
!! TGCTTAAGGACCATTGATTC+TGG + chr1_3:73004083-73004102 Msa0139350:CDS 40.0%
!! AGGACCATTGATTCTGGATA+TGG + chr1_3:73004089-73004108 Msa0139350:CDS 40.0%
GAGTCCATATCCAGAATCAA+TGG - chr1_3:73004096-73004115 None:intergenic 40.0%
ATTCTCCCCACTAACAAGTA+TGG + chr1_3:73004125-73004144 Msa0139350:CDS 40.0%
! CAAGTCCATACTTGTTAGTG+GGG - chr1_3:73004133-73004152 None:intergenic 40.0%
AGCTTCAATTGCTTCAACAC+GGG - chr1_3:73004204-73004223 None:intergenic 40.0%
GAGCTTCAATTGCTTCAACA+CGG - chr1_3:73004205-73004224 None:intergenic 40.0%
GTTGAAGCAATTGAAGCTCA+TGG + chr1_3:73004206-73004225 Msa0139350:CDS 40.0%
AAAGCCATGTTTATCTGGCA+AGG - chr1_3:73004255-73004274 None:intergenic 40.0%
GTGACAAAGCCATGTTTATC+TGG - chr1_3:73004260-73004279 None:intergenic 40.0%
!! GATAAACATGGCTTTGTCAC+AGG + chr1_3:73004260-73004279 Msa0139350:CDS 40.0%
GACCAGGTTTCTGCTTAATT+TGG - chr1_3:73004319-73004338 None:intergenic 40.0%
ACTCTTCAGTCTTCACGATT+TGG + chr1_3:73004604-73004623 Msa0139350:intron 40.0%
CTCTTCAGTCTTCACGATTT+GGG + chr1_3:73004605-73004624 Msa0139350:intron 40.0%
AGTAGGAGAGAGTTGCATTA+GGG - chr1_3:73004654-73004673 None:intergenic 40.0%
TAGTAGGAGAGAGTTGCATT+AGG - chr1_3:73004655-73004674 None:intergenic 40.0%
ACAGCGATATATTTGGCATC+GGG - chr1_3:73004863-73004882 None:intergenic 40.0%
CAGAGCAACAGCGATATATT+TGG - chr1_3:73004870-73004889 None:intergenic 40.0%
ATATATCGCTGTTGCTCTGT+TGG + chr1_3:73004871-73004890 Msa0139350:CDS 40.0%
GCTAGAAGCTAAACCAAACT+AGG - chr1_3:73005212-73005231 None:intergenic 40.0%
CTGAAAAAAGTTAGAAGCGG+AGG + chr1_3:73005314-73005333 Msa0139350:intron 40.0%
!! TGGGCACCATACTTTGAAAT+TGG - chr1_3:73005486-73005505 None:intergenic 40.0%
CCTGTCTTTATGCGCAAAAA+TGG - chr1_3:73005779-73005798 None:intergenic 40.0%
!! CCATTTTTGCGCATAAAGAC+AGG + chr1_3:73005776-73005795 Msa0139350:CDS 40.0%
! TGTTTAGTGTCGGAAAGGAT+CGG + chr1_3:73005947-73005966 Msa0139350:CDS 40.0%
AGGATCGGGTAGTAAAGTAT+TGG + chr1_3:73005962-73005981 Msa0139350:CDS 40.0%
! GGATCGGGTAGTAAAGTATT+GGG + chr1_3:73005963-73005982 Msa0139350:CDS 40.0%
! CGTGGTGATTTTATTGTCAC+CGG + chr1_3:73006060-73006079 Msa0139350:CDS 40.0%
ACTTCTTCAATGCAGGACAT+AGG + chr1_3:73006171-73006190 Msa0139350:intron 40.0%
CTTCTTCAATGCAGGACATA+GGG + chr1_3:73006172-73006191 Msa0139350:intron 40.0%
TGCAGGAAGAAAAGGAGAAA+AGG + chr1_3:73006360-73006379 Msa0139350:intron 40.0%
ACTGAAGGAAGAAATACCAG+AGG + chr1_3:73006436-73006455 Msa0139350:CDS 40.0%
AAGGAAGAAATACCAGAGGA+GGG + chr1_3:73006440-73006459 Msa0139350:CDS 40.0%
AAAGCGCATTAGTGAACATC+AGG + chr1_3:73006553-73006572 Msa0139350:CDS 40.0%
ACAGGCTTCAAATTGCTTGA+TGG - chr1_3:73006799-73006818 None:intergenic 40.0%
! CAATGGGGTTCAATGTTTTG+GGG - chr1_3:73006950-73006969 None:intergenic 40.0%
GAACATAATCAGAAGGTGAC+CGG - chr1_3:73007203-73007222 None:intergenic 40.0%
TGTAAAGATTATTGCGCTCC+AGG - chr1_3:73007523-73007542 None:intergenic 40.0%
CAATACTCGGATGTCAATAG+CGG + chr1_3:73008020-73008039 Msa0139350:intron 40.0%
ATGTCAATAGCGGCAGATAT+AGG + chr1_3:73008030-73008049 Msa0139350:intron 40.0%
ATAGCACATTCCCATCAATC+CGG - chr1_3:73008201-73008220 None:intergenic 40.0%
!!! TTCCTAACCCGTTTTGGAAT+CGG + chr1_3:73008220-73008239 Msa0139350:intron 40.0%
ACAAGCTAGGTTGTCAATCA+TGG - chr1_3:73008263-73008282 None:intergenic 40.0%
GAAAAGACACCCTAGTAACA+GGG - chr1_3:73008347-73008366 None:intergenic 40.0%
AGAAAAGACACCCTAGTAAC+AGG - chr1_3:73008348-73008367 None:intergenic 40.0%
AGTGCAATGGTTAGAGGTTT+AGG + chr1_3:73008452-73008471 Msa0139350:intron 40.0%
GAAATGCTTCTGCTTTCTAG+TGG - chr1_3:73008573-73008592 None:intergenic 40.0%
GTTCTATTAACTGAACCAGC+CGG - chr1_3:73009081-73009100 None:intergenic 40.0%
GAATCACCCATTAAAAGAGG+TGG + chr1_3:73009146-73009165 Msa0139350:intron 40.0%
! TGAAAGGCCCCAATTTTGTA+GGG - chr1_3:73009221-73009240 None:intergenic 40.0%
! ATGAAAGGCCCCAATTTTGT+AGG - chr1_3:73009222-73009241 None:intergenic 40.0%
GACTGAAAGGAATCAAGTCA+TGG + chr1_3:73009451-73009470 Msa0139350:intron 40.0%
CAACCTCTTGTGTAGAAAAC+AGG + chr1_3:73009477-73009496 Msa0139350:intron 40.0%
! CTACCTGTTTTCTACACAAG+AGG - chr1_3:73009483-73009502 None:intergenic 40.0%
! AAAACAGGTAGAGAGAGTGT+TGG + chr1_3:73009492-73009511 Msa0139350:intron 40.0%
!! AAACAGGTAGAGAGAGTGTT+GGG + chr1_3:73009493-73009512 Msa0139350:intron 40.0%
GAGGTTTGTCAGATCAAAAG+AGG + chr1_3:73009568-73009587 Msa0139350:intron 40.0%
! AAGCTTTATCCCACTAAGTG+GGG - chr1_3:73009713-73009732 None:intergenic 40.0%
! CAAGCTTTATCCCACTAAGT+GGG - chr1_3:73009714-73009733 None:intergenic 40.0%
TTTGAACCTTGTATCAGGGT+TGG + chr1_3:73009779-73009798 Msa0139350:intron 40.0%
ATCTTTCCAACCCTGATACA+AGG - chr1_3:73009788-73009807 None:intergenic 40.0%
CAGGGTTGGAAAGATATCTT+TGG + chr1_3:73009793-73009812 Msa0139350:intron 40.0%
ACAAACCTGGATATGATCCA+TGG - chr1_3:73009833-73009852 None:intergenic 40.0%
! CAAGATCAGATGCTCTTTTC+CGG + chr1_3:73009938-73009957 Msa0139350:CDS 40.0%
! AAGATCAGATGCTCTTTTCC+GGG + chr1_3:73009939-73009958 Msa0139350:CDS 40.0%
! CAGATACTGGAGAGTTTTTG+CGG + chr1_3:73010022-73010041 Msa0139350:CDS 40.0%
! TAGAGCTTTGATCCCCAAAA+AGG + chr1_3:73010201-73010220 Msa0139350:three_prime_UTR 40.0%
! TTTACGAGGATGCCTTTTTG+GGG - chr1_3:73010216-73010235 None:intergenic 40.0%
! CTTTACGAGGATGCCTTTTT+GGG - chr1_3:73010217-73010236 None:intergenic 40.0%
! ACTTTACGAGGATGCCTTTT+TGG - chr1_3:73010218-73010237 None:intergenic 40.0%
! TCCAATACGGTTTTCTTGTC+AGG + chr1_3:73010416-73010435 Msa0139350:three_prime_UTR 40.0%
! CCAATACGGTTTTCTTGTCA+GGG + chr1_3:73010417-73010436 Msa0139350:three_prime_UTR 40.0%
CTGCCTCAGTTAGAGGTTTA+TGG - chr1_3:73002026-73002045 None:intergenic 45.0%
ATTGTTGCTGCCTCAGTTAG+AGG - chr1_3:73002033-73002052 None:intergenic 45.0%
TCTAACTGAGGCAGCAACAA+TGG + chr1_3:73002032-73002051 Msa0139350:exon 45.0%
AACATCTCATACGACAGCTC+CGG + chr1_3:73002117-73002136 Msa0139350:CDS 45.0%
TCTCCAGCTCTCGAGAAAAT+CGG + chr1_3:73002153-73002172 Msa0139350:CDS 45.0%
ATTGCTGGTGGTTATGGTGA+TGG + chr1_3:73002371-73002390 Msa0139350:CDS 45.0%
GTGATGGCAGTATAAGGCTT+TGG + chr1_3:73002387-73002406 Msa0139350:CDS 45.0%
!! AAGGCTTTGGGACACTGATA+AGG + chr1_3:73002400-73002419 Msa0139350:CDS 45.0%
!! AGGCTTTGGGACACTGATAA+GGG + chr1_3:73002401-73002420 Msa0139350:CDS 45.0%
! CTTGGTTCGTTACTTGCTTC+TGG + chr1_3:73002485-73002504 Msa0139350:CDS 45.0%
!! TGTTTCTAGCTTGCTTCCAC+AGG - chr1_3:73002779-73002798 None:intergenic 45.0%
AGCTCTACCAAATAGTCTGC+GGG + chr1_3:73002830-73002849 Msa0139350:intron 45.0%
ATAAGCACCCGCAGACTATT+TGG - chr1_3:73002840-73002859 None:intergenic 45.0%
TCACAAGTGCTTATGCCAGT+AGG + chr1_3:73003124-73003143 Msa0139350:intron 45.0%
GCGGGCATCATAGTGAAATT+TGG + chr1_3:73003331-73003350 Msa0139350:CDS 45.0%
TGGACATTGGATGTTGATCC+TGG + chr1_3:73003351-73003370 Msa0139350:CDS 45.0%
GTAACAAGAAACCTCTCACC+AGG - chr1_3:73003372-73003391 None:intergenic 45.0%
GGTGAGAGGTTTCTTGTTAC+GGG + chr1_3:73003372-73003391 Msa0139350:CDS 45.0%
CAAGCAAGATTCTGTGGATG+GGG + chr1_3:73003428-73003447 Msa0139350:CDS 45.0%
!! CGCATTTTGGTGAGATTCAG+CGG + chr1_3:73003505-73003524 Msa0139350:CDS 45.0%
!! GATTCCCAGACTTGTTGAAC+TGG - chr1_3:73003557-73003576 None:intergenic 45.0%
CATCTTTCCTGCAACATGAC+AGG - chr1_3:73003586-73003605 None:intergenic 45.0%
CTGTCATGTTGCAGGAAAGA+TGG + chr1_3:73003584-73003603 Msa0139350:CDS 45.0%
CAAAGCGTAAAGCCAAACGT+AGG + chr1_3:73003640-73003659 Msa0139350:CDS 45.0%
! AGAGAAGAAGCATGGCAAAG+AGG + chr1_3:73003677-73003696 Msa0139350:CDS 45.0%
GCTACAGAGGGAACTGAAAA+TGG + chr1_3:73003699-73003718 Msa0139350:CDS 45.0%
GGGAACTGAAAATGGAGATG+CGG + chr1_3:73003707-73003726 Msa0139350:CDS 45.0%
AATGGAGATGCGGAGAACAA+AGG + chr1_3:73003717-73003736 Msa0139350:CDS 45.0%
AGTGAATTCTTCGGAGTGGT+TGG - chr1_3:73003864-73003883 None:intergenic 45.0%
TGCTAGTGAATTCTTCGGAG+TGG - chr1_3:73003868-73003887 None:intergenic 45.0%
!! TGGACTTGTTGGAACCAAAG+AGG + chr1_3:73004145-73004164 Msa0139350:CDS 45.0%
!! GGACTTGTTGGAACCAAAGA+GGG + chr1_3:73004146-73004165 Msa0139350:CDS 45.0%
GAAGCAATTGAAGCTCATGG+AGG + chr1_3:73004209-73004228 Msa0139350:CDS 45.0%
GGAATATTACGCACTTGACC+AGG - chr1_3:73004335-73004354 None:intergenic 45.0%
! AGTCTTCACGATTTGGGTGT+GGG + chr1_3:73004611-73004630 Msa0139350:intron 45.0%
TAGGAGAGAGTTGCATTAGG+GGG - chr1_3:73004652-73004671 None:intergenic 45.0%
GTAGGAGAGAGTTGCATTAG+GGG - chr1_3:73004653-73004672 None:intergenic 45.0%
CTTCCCAGATTGCCAACATA+TGG - chr1_3:73005039-73005058 None:intergenic 45.0%
TATGTTGGCAATCTGGGAAG+TGG + chr1_3:73005039-73005058 Msa0139350:intron 45.0%
ATGTTGGCAATCTGGGAAGT+GGG + chr1_3:73005040-73005059 Msa0139350:intron 45.0%
!! CAGGAAGCACTTACAGAGAA+CGG - chr1_3:73005405-73005424 None:intergenic 45.0%
GCTTGTGGCCATACAATGAA+AGG - chr1_3:73005648-73005667 None:intergenic 45.0%
! GTTTAGTGTCGGAAAGGATC+GGG + chr1_3:73005948-73005967 Msa0139350:CDS 45.0%
GAGCAGCTGTTAACTCTTGA+AGG + chr1_3:73006000-73006019 Msa0139350:CDS 45.0%
TGTCTTGCAGTCAGTAATCG+TGG + chr1_3:73006042-73006061 Msa0139350:CDS 45.0%
AATTGAGCGGTCATGAGATC+CGG - chr1_3:73006082-73006101 None:intergenic 45.0%
GAGTGACACTTCTTCAATGC+AGG + chr1_3:73006164-73006183 Msa0139350:intron 45.0%
AGGGCCATTGTCTCTTACAA+TGG + chr1_3:73006191-73006210 Msa0139350:intron 45.0%
GAAGGAAGAAATACCAGAGG+AGG + chr1_3:73006439-73006458 Msa0139350:CDS 45.0%
!!! CTCGGTTTTTTTCCCAGCTA+CGG - chr1_3:73006474-73006493 None:intergenic 45.0%
GGTTATACTCGCTCTCTTAC+AGG + chr1_3:73006574-73006593 Msa0139350:intron 45.0%
! TGTTTGGGGTTCAGAGCATA+TGG - chr1_3:73006769-73006788 None:intergenic 45.0%
! CATTCATAAGCGGATTTGCC+TGG - chr1_3:73007179-73007198 None:intergenic 45.0%
CAGGCAAATCCGCTTATGAA+TGG + chr1_3:73007177-73007196 Msa0139350:CDS 45.0%
CAAATCCGCTTATGAATGGC+CGG + chr1_3:73007181-73007200 Msa0139350:CDS 45.0%
CACTATACTGCGATGCACTT+GGG - chr1_3:73008172-73008191 None:intergenic 45.0%
!! GTGCTATTCCTAACCCGTTT+TGG + chr1_3:73008214-73008233 Msa0139350:intron 45.0%
AAATCCACCCTCAATGGATC+AGG + chr1_3:73008309-73008328 Msa0139350:intron 45.0%
AAAAGGGCCTGATCCATTGA+GGG - chr1_3:73008319-73008338 None:intergenic 45.0%
!! AAGAAGAGCATCAATGCACC+TGG + chr1_3:73008425-73008444 Msa0139350:intron 45.0%
CTAACCATTGCACTAAGACC+AGG - chr1_3:73008446-73008465 None:intergenic 45.0%
GGTCTTAGTGCAATGGTTAG+AGG + chr1_3:73008446-73008465 Msa0139350:intron 45.0%
GCAATGGTTAGAGGTTTAGG+AGG + chr1_3:73008455-73008474 Msa0139350:intron 45.0%
TCACTGAAGTCGGTTAAGAC+AGG - chr1_3:73008968-73008987 None:intergenic 45.0%
AACGAGGTCAAGGTCATCTT+TGG + chr1_3:73009021-73009040 Msa0139350:intron 45.0%
GTTGTTGTCACGTGACTGAA+AGG + chr1_3:73009438-73009457 Msa0139350:intron 45.0%
!! AACAGGTAGAGAGAGTGTTG+GGG + chr1_3:73009494-73009513 Msa0139350:intron 45.0%
!! ACTAAGTGGGGTTGGTTACA+TGG - chr1_3:73009701-73009720 None:intergenic 45.0%
ATGTAACCAACCCCACTTAG+TGG + chr1_3:73009700-73009719 Msa0139350:intron 45.0%
TGTAACCAACCCCACTTAGT+GGG + chr1_3:73009701-73009720 Msa0139350:intron 45.0%
TTTATCCCACTAAGTGGGGT+TGG - chr1_3:73009709-73009728 None:intergenic 45.0%
! CCAAGCTTTATCCCACTAAG+TGG - chr1_3:73009715-73009734 None:intergenic 45.0%
CCACTTAGTGGGATAAAGCT+TGG + chr1_3:73009712-73009731 Msa0139350:intron 45.0%
!!! TGGTTTTAACCTTGCAGCCA+TGG + chr1_3:73009813-73009832 Msa0139350:CDS 45.0%
!! GCAGTTTTGATCTTGCATCC+CGG - chr1_3:73009960-73009979 None:intergenic 45.0%
GGATGCAAGATCAAAACTGC+TGG + chr1_3:73009960-73009979 Msa0139350:CDS 45.0%
CCCTGACAAGAAAACCGTAT+TGG - chr1_3:73010420-73010439 None:intergenic 45.0%
!!! AATATTTGTTTTTTTTTATA+AGG + chr1_3:73004366-73004385 Msa0139350:intron 5.0%
!! ATTAAAAAAAATAATTATCA+GGG - chr1_3:73005817-73005836 None:intergenic 5.0%
!!! TATTAGTTATTATTTTTAAT+TGG + chr1_3:73007781-73007800 Msa0139350:intron 5.0%
!! TAATAAATTTAAAAAAGAAA+AGG - chr1_3:73008621-73008640 None:intergenic 5.0%
AGGTTTATGGCTTCAGGGCA+GGG - chr1_3:73002013-73002032 None:intergenic 50.0%
TGAGATGTTGGAATCCACGG+AGG - chr1_3:73002106-73002125 None:intergenic 50.0%
GGAGCTGTCGTATGAGATGT+TGG - chr1_3:73002118-73002137 None:intergenic 50.0%
!! TGGAGAGAGAAGGTGTTTGC+CGG - chr1_3:73002139-73002158 None:intergenic 50.0%
CTCTCGAGAAAATCGGCGTA+TGG + chr1_3:73002160-73002179 Msa0139350:CDS 50.0%
ACACGGAACGGAAGGAGTTA+GGG - chr1_3:73002214-73002233 None:intergenic 50.0%
GGAAGATGCGATTGACGTGA+CGG - chr1_3:73002253-73002272 None:intergenic 50.0%
CGCATCTTCCCCTTCTCAAT+TGG + chr1_3:73002263-73002282 Msa0139350:CDS 50.0%
! TGGGATGTTGTTGGTGAGAC+CGG + chr1_3:73002533-73002552 Msa0139350:CDS 50.0%
TGGATGTTGATCCTGGTGAG+AGG + chr1_3:73003358-73003377 Msa0139350:CDS 50.0%
TGTTACGGGTTCTGCAGACA+AGG + chr1_3:73003386-73003405 Msa0139350:CDS 50.0%
TGTGGATGGGGAGTCTGTAA+AGG + chr1_3:73003440-73003459 Msa0139350:CDS 50.0%
GATGGGGAGTCTGTAAAGGA+TGG + chr1_3:73003444-73003463 Msa0139350:CDS 50.0%
!! AGACTTGTTGAACTGGACCG+TGG - chr1_3:73003550-73003569 None:intergenic 50.0%
ACGGTCCAGTTCAACAAGTC+TGG + chr1_3:73003549-73003568 Msa0139350:CDS 50.0%
CGGTCCAGTTCAACAAGTCT+GGG + chr1_3:73003550-73003569 Msa0139350:CDS 50.0%
CATGGCAAAGAGGCTACAGA+GGG + chr1_3:73003687-73003706 Msa0139350:CDS 50.0%
CTTAAGCAGGAACCAGTGCT+TGG - chr1_3:73004071-73004090 None:intergenic 50.0%
!! CAAGCACTGGTTCCTGCTTA+AGG + chr1_3:73004069-73004088 Msa0139350:CDS 50.0%
GCTGCCTTGCCAGATAAACA+TGG + chr1_3:73004248-73004267 Msa0139350:CDS 50.0%
! CAGTCTTCACGATTTGGGTG+TGG + chr1_3:73004610-73004629 Msa0139350:intron 50.0%
! GTCTTCACGATTTGGGTGTG+GGG + chr1_3:73004612-73004631 Msa0139350:intron 50.0%
AGAGAGTTGCATTAGGGGGA+TGG - chr1_3:73004648-73004667 None:intergenic 50.0%
TACACAGAACAGGCAGCTTG+TGG - chr1_3:73005663-73005682 None:intergenic 50.0%
CAAGCTGCCTGTTCTGTGTA+TGG + chr1_3:73005663-73005682 Msa0139350:CDS 50.0%
CGTAGCTGGGAAAAAAACCG+AGG + chr1_3:73006472-73006491 Msa0139350:CDS 50.0%
TGTAGCGGTAAGGGTTTCCT+CGG - chr1_3:73006492-73006511 None:intergenic 50.0%
TGGGGTTCAGAGCATATGGT+TGG - chr1_3:73006765-73006784 None:intergenic 50.0%
CCACTATACTGCGATGCACT+TGG - chr1_3:73008173-73008192 None:intergenic 50.0%
CCAAGTGCATCGCAGTATAG+TGG + chr1_3:73008170-73008189 Msa0139350:intron 50.0%
TGCATCGCAGTATAGTGGTG+CGG + chr1_3:73008175-73008194 Msa0139350:intron 50.0%
! AGCCGATTCCAAAACGGGTT+AGG - chr1_3:73008225-73008244 None:intergenic 50.0%
! GTAGCAGCCGATTCCAAAAC+GGG - chr1_3:73008230-73008249 None:intergenic 50.0%
! GGTAGCAGCCGATTCCAAAA+CGG - chr1_3:73008231-73008250 None:intergenic 50.0%
GAAAAGGGCCTGATCCATTG+AGG - chr1_3:73008320-73008339 None:intergenic 50.0%
!! TGCACCTGGTCTTAGTGCAA+TGG + chr1_3:73008439-73008458 Msa0139350:intron 50.0%
AGTGGGTGGAACACTTCTTC+AGG - chr1_3:73008555-73008574 None:intergenic 50.0%
! TGCTTCTGCTTTCTAGTGGG+TGG - chr1_3:73008569-73008588 None:intergenic 50.0%
! GTTGAGCTTGTTTGCCGCAT+AGG + chr1_3:73008887-73008906 Msa0139350:CDS 50.0%
GAAGTCGGTTAAGACAGGTC+TGG - chr1_3:73008963-73008982 None:intergenic 50.0%
GATAACTTGATTGGACCGGC+TGG + chr1_3:73009063-73009082 Msa0139350:intron 50.0%
ATTTAACCAAGGGGGAGCCT+TGG + chr1_3:73009403-73009422 Msa0139350:intron 50.0%
ACAACTTTACCGTTGCGCCA+AGG - chr1_3:73009423-73009442 None:intergenic 50.0%
GGATATGATCCATGGCTGCA+AGG - chr1_3:73009825-73009844 None:intergenic 50.0%
TGCAGCCATGGATCATATCC+AGG + chr1_3:73009825-73009844 Msa0139350:CDS 50.0%
TGATGCTGGTGGCTCAGAAA+AGG + chr1_3:73010288-73010307 Msa0139350:three_prime_UTR 50.0%
TGGTGGCTCAGAAAAGGTCA+GGG + chr1_3:73010294-73010313 Msa0139350:intron 50.0%
TGTCAGGGCTAATACCCTGT+TGG + chr1_3:73010432-73010451 Msa0139350:three_prime_UTR 50.0%
GAGGTTTATGGCTTCAGGGC+AGG - chr1_3:73002014-73002033 None:intergenic 55.0%
TTACCTCCGATACGAGCCGT+CGG + chr1_3:73002062-73002081 Msa0139350:CDS 55.0%
TCTCGAGAGCTGGAGAGAGA+AGG - chr1_3:73002149-73002168 None:intergenic 55.0%
!!! ACGCCGATTTTCTCGAGAGC+TGG - chr1_3:73002159-73002178 None:intergenic 55.0%
GACACGGAACGGAAGGAGTT+AGG - chr1_3:73002215-73002234 None:intergenic 55.0%
AGAAGGACCACGACACGGAA+CGG - chr1_3:73002226-73002245 None:intergenic 55.0%
ATTGACGTGACGGCGAGAGA+AGG - chr1_3:73002243-73002262 None:intergenic 55.0%
ACCGGTCTCTTTCGTCTTCG+CGG + chr1_3:73002551-73002570 Msa0139350:CDS 55.0%
ACCGCGAAGACGAAAGAGAC+CGG - chr1_3:73002555-73002574 None:intergenic 55.0%
CATTAGCTGTCCTGAGCCTG+TGG + chr1_3:73002760-73002779 Msa0139350:intron 55.0%
!! TAGCTTGCTTCCACAGGCTC+AGG - chr1_3:73002773-73002792 None:intergenic 55.0%
TCTGCGGGTGCTTATGTCAG+TGG + chr1_3:73002845-73002864 Msa0139350:intron 55.0%
GGGGAGTCTGTAAAGGATGG+TGG + chr1_3:73003447-73003466 Msa0139350:CDS 55.0%
! CTGCTAGCCTGTCATGTTGC+AGG + chr1_3:73003576-73003595 Msa0139350:CDS 55.0%
CTTCGGCGTCATCCAACACA+CGG - chr1_3:73003620-73003639 None:intergenic 55.0%
GCATGGCAAAGAGGCTACAG+AGG + chr1_3:73003686-73003705 Msa0139350:CDS 55.0%
AAGCTCATGGAGGCTCTGTG+CGG + chr1_3:73004219-73004238 Msa0139350:CDS 55.0%
GCTCTTCAGTACGATCCCAG+CGG - chr1_3:73006107-73006126 None:intergenic 55.0%
AATACCAGAGGAGGGAGCAG+TGG + chr1_3:73006448-73006467 Msa0139350:CDS 55.0%
GGTGACCGGCCATTCATAAG+CGG - chr1_3:73007189-73007208 None:intergenic 55.0%
GGGCTGTTCTTCCGTGAAAG+CGG - chr1_3:73008122-73008141 None:intergenic 55.0%
ACGGAAGAACAGCCCAGAGT+GGG + chr1_3:73008127-73008146 Msa0139350:intron 55.0%
TGGAAGCTACCACCCACTCT+GGG - chr1_3:73008142-73008161 None:intergenic 55.0%
CGATGCACTTGGGAGCTTTG+TGG - chr1_3:73008162-73008181 None:intergenic 55.0%
GCAACAGCAGTGTGCCTATG+CGG - chr1_3:73008904-73008923 None:intergenic 55.0%
GTTAAGACAGGTCTGGCAGC+TGG - chr1_3:73008956-73008975 None:intergenic 55.0%
CTGGTGGCTCAGAAAAGGTC+AGG + chr1_3:73010293-73010312 Msa0139350:intron 55.0%
ACTCCTTCCGTTCCGTGTCG+TGG + chr1_3:73002216-73002235 Msa0139350:CDS 60.0%
GCGAGAGAAGGACCACGACA+CGG - chr1_3:73002231-73002250 None:intergenic 60.0%
TCTTCGCGGTCATCGCGATC+AGG + chr1_3:73002565-73002584 Msa0139350:CDS 60.0%
ATGACCGCTCAATTCGCCGC+TGG + chr1_3:73006088-73006107 Msa0139350:CDS 60.0%
TGACCGCTCAATTCGCCGCT+GGG + chr1_3:73006089-73006108 Msa0139350:CDS 60.0%
GATCCCAGCGGCGAATTGAG+CGG - chr1_3:73006095-73006114 None:intergenic 60.0%
! GGCAGATTGCGCCGCTTTCA+CGG + chr1_3:73008108-73008127 Msa0139350:intron 60.0%
CACGGAAGAACAGCCCAGAG+TGG + chr1_3:73008126-73008145 Msa0139350:intron 60.0%
GAAGAACAGCCCAGAGTGGG+TGG + chr1_3:73008130-73008149 Msa0139350:intron 60.0%
GTGGAAGCTACCACCCACTC+TGG - chr1_3:73008143-73008162 None:intergenic 60.0%
TCGCAGTATAGTGGTGCGGC+CGG + chr1_3:73008179-73008198 Msa0139350:intron 60.0%
TAGTGGTGCGGCCGGATTGA+TGG + chr1_3:73008187-73008206 Msa0139350:intron 60.0%
AGTGGTGCGGCCGGATTGAT+GGG + chr1_3:73008188-73008207 Msa0139350:intron 60.0%
AGGGCCTGATCCATTGAGGG+TGG - chr1_3:73008316-73008335 None:intergenic 60.0%
ACGAGGCCGACGGCTCGTAT+CGG - chr1_3:73002071-73002090 None:intergenic 65.0%
TACGAGCCGTCGGCCTCGTT+CGG + chr1_3:73002072-73002091 Msa0139350:CDS 65.0%
ATGACGCCGAACGAGGCCGA+CGG - chr1_3:73002081-73002100 None:intergenic 65.0%
GGCGTATGGCACGTGCGACA+GGG + chr1_3:73002174-73002193 Msa0139350:CDS 65.0%
GGACCACGACACGGAACGGA+AGG - chr1_3:73002222-73002241 None:intergenic 65.0%
AGGGAGCAGTGGCCGTAGCT+GGG + chr1_3:73006459-73006478 Msa0139350:CDS 65.0%
GACAGGTCTGGCAGCTGGTG+TGG - chr1_3:73008951-73008970 None:intergenic 65.0%
AAGGGGGAGCCTTGGCGCAA+CGG + chr1_3:73009411-73009430 Msa0139350:intron 65.0%
AGGCCGACGGCTCGTATCGG+AGG - chr1_3:73002068-73002087 None:intergenic 70.0%
GGAGGCGATGACGCCGAACG+AGG - chr1_3:73002088-73002107 None:intergenic 70.0%
GTTCGGCGTCATCGCCTCCG+TGG + chr1_3:73002089-73002108 Msa0139350:CDS 70.0%
CGGCGTATGGCACGTGCGAC+AGG + chr1_3:73002173-73002192 Msa0139350:CDS 70.0%
ACGGCCACTGCTCCCTCCTC+TGG - chr1_3:73006455-73006474 None:intergenic 70.0%
GAGGGAGCAGTGGCCGTAGC+TGG + chr1_3:73006458-73006477 Msa0139350:CDS 70.0%
GTTGCGCCAAGGCTCCCCCT+TGG - chr1_3:73009412-73009431 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 73001971 73010472 73001971 ID=Msa0139350;Name=Msa0139350
chr1_3 mRNA 73001971 73010472 73001971 ID=Msa0139350-mRNA-1;Parent=Msa0139350;Name=Msa0139350-mRNA-1;_AED=0.04;_eAED=0.04;_QI=80|1|1|1|0.91|0.84|13|353|943
chr1_3 exon 73001971 73002284 73001971 ID=Msa0139350-mRNA-1:exon:25444;Parent=Msa0139350-mRNA-1
chr1_3 exon 73002371 73002586 73002371 ID=Msa0139350-mRNA-1:exon:25445;Parent=Msa0139350-mRNA-1
chr1_3 exon 73003222 73004340 73003222 ID=Msa0139350-mRNA-1:exon:25446;Parent=Msa0139350-mRNA-1
chr1_3 exon 73004785 73004907 73004785 ID=Msa0139350-mRNA-1:exon:25447;Parent=Msa0139350-mRNA-1
chr1_3 exon 73005616 73005797 73005616 ID=Msa0139350-mRNA-1:exon:25448;Parent=Msa0139350-mRNA-1
chr1_3 exon 73005909 73006140 73005909 ID=Msa0139350-mRNA-1:exon:25449;Parent=Msa0139350-mRNA-1
chr1_3 exon 73006365 73006574 73006365 ID=Msa0139350-mRNA-1:exon:25450;Parent=Msa0139350-mRNA-1
chr1_3 exon 73007144 73007272 73007144 ID=Msa0139350-mRNA-1:exon:25451;Parent=Msa0139350-mRNA-1
chr1_3 exon 73008675 73008743 73008675 ID=Msa0139350-mRNA-1:exon:25452;Parent=Msa0139350-mRNA-1
chr1_3 exon 73008887 73009009 73008887 ID=Msa0139350-mRNA-1:exon:25453;Parent=Msa0139350-mRNA-1
chr1_3 exon 73009796 73009846 73009796 ID=Msa0139350-mRNA-1:exon:25454;Parent=Msa0139350-mRNA-1
chr1_3 exon 73009925 73010309 73009925 ID=Msa0139350-mRNA-1:exon:25455;Parent=Msa0139350-mRNA-1
chr1_3 exon 73010361 73010472 73010361 ID=Msa0139350-mRNA-1:exon:25456;Parent=Msa0139350-mRNA-1
chr1_3 five_prime_UTR 73001971 73002050 73001971 ID=Msa0139350-mRNA-1:five_prime_utr;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73002051 73002284 73002051 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73002371 73002586 73002371 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73003222 73004340 73003222 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73004785 73004907 73004785 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73005616 73005797 73005616 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73005909 73006140 73005909 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73006365 73006574 73006365 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73007144 73007272 73007144 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73008675 73008743 73008675 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73008887 73009009 73008887 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73009796 73009846 73009796 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 CDS 73009925 73010068 73009925 ID=Msa0139350-mRNA-1:cds;Parent=Msa0139350-mRNA-1
chr1_3 three_prime_UTR 73010069 73010309 73010069 ID=Msa0139350-mRNA-1:three_prime_utr;Parent=Msa0139350-mRNA-1
chr1_3 three_prime_UTR 73010361 73010472 73010361 ID=Msa0139350-mRNA-1:three_prime_utr;Parent=Msa0139350-mRNA-1
Gene Sequence

>Msa0139350

ATGGTGAAAGCTTACCTCCGATACGAGCCGTCGGCCTCGTTCGGCGTCATCGCCTCCGTGGATTCCAACATCTCATACGACAGCTCCGGCAAACACCTTCTCTCTCCAGCTCTCGAGAAAATCGGCGTATGGCACGTGCGACAGGGCATCTGCATCAAAACCCTAACTCCTTCCGTTCCGTGTCGTGGTCCTTCTCTCGCCGTCACGTCAATCGCATCTTCCCCTTCTCAATTGATTGCTGGTGGTTATGGTGATGGCAGTATAAGGCTTTGGGACACTGATAAGGGAACTTGTGAAACTACTTTGAATGGACATAAAGGAGCTGTAACTGCTCTTCGTTATAATAAGCTTGGTTCGTTACTTGCTTCTGGTAGCAAAGATAACGATGTTATTTTGTGGGATGTTGTTGGTGAGACCGGTCTCTTTCGTCTTCGCGGTCATCGCGATCAGGTGACTGATGTTGTTTTTGTTGGTTCTGGGAAAAAACTAGTTACTTCATCCAAAGATAAATTTTTGAGAGTATGGGATATTGATACTCAGCACTGTATGCAAATTGTAGGCGGGCATCATAGTGAAATTTGGACATTGGATGTTGATCCTGGTGAGAGGTTTCTTGTTACGGGTTCTGCAGACAAGGAGCTCCGTTTTTATTCAATCAAGCAAGATTCTGTGGATGGGGAGTCTGTAAAGGATGGTGGAGATTCTTCCGTTTCAAACAAATGGGATGTTTTGACGCATTTTGGTGAGATTCAGCGGCAAAGCAAAGATAGAGTTGCCACGGTCCAGTTCAACAAGTCTGGGAATCTGCTAGCCTGTCATGTTGCAGGAAAGATGGTAGAAATATTCCGTGTGTTGGATGACGCCGAAGCAAAGCGTAAAGCCAAACGTAGGGTTAACCGTAAAAAAGAGAAGAAGCATGGCAAAGAGGCTACAGAGGGAACTGAAAATGGAGATGCGGAGAACAAAGGAGATAATTCTATTGTGACTGATGGACCCATAGAAACAAATAAAACAGTTACCGTACCTGATGTTTTTAAACTGTTGCATACTATTAGAGCTAGCAAAAAGATATGCTCCATTTCTTTTTGTCCAACCACTCCGAAGAATTCACTAGCAACTCTAGCATTGTCCTTAAACAATAATCTAATCGAGTTCTACTCCATTGAAAGTGGTGAAACCAAAAAAACACTTGGTATTGATCTTGAAGGACACCGTTCTGATGTTCGAAGTGTCACACTTAGTTCGGACAACACTTTTCTGTTGTCAACCAGTCACAATGCAGTAAAAATATGGAATCCAAGCACTGGTTCCTGCTTAAGGACCATTGATTCTGGATATGGACTCTGCAGTTTAATTCTCCCCACTAACAAGTATGGACTTGTTGGAACCAAAGAGGGAACCTTAGAAATTATTGACATCGGAAGCAGTACCCGTGTTGAAGCAATTGAAGCTCATGGAGGCTCTGTGCGGACAATTGCTGCCTTGCCAGATAAACATGGCTTTGTCACAGGAAGTCAAGATCATGATGTAAAGTTTTGGGAGTACCAAATTAAGCAGAAACCTGGTCAAGCTACTAAGCAACTCACCGTGTCAAATGTCAAGACTATGAGAATGAATGATGATGTTCTTGTGGTTGCAATTAGTCCCGATGCCAAATATATCGCTGTTGCTCTGTTGGATAGTACTGTTAAGATTCACTTTGTAGACACGTTCAAATTCTTCCTTTCATTGTATGGCCACAAGCTGCCTGTTCTGTGTATGGATATATCATCAGATGGAGATTTAATTGTGACTGGCTCTGCTGATAAAAATATAAAGATTTGGGGTTTGGATTTTGGTGACTGTCATAAATCCATTTTTGCGCATAAAGACAGTGTTATGGCAGTACAATTTGTTCCCAAGACACATTATGTGTTTAGTGTCGGAAAGGATCGGGTAGTAAAGTATTGGGATGCTGATAAATTTGAGCAGCTGTTAACTCTTGAAGGACATCATGCAGATATTTGGTGTCTTGCAGTCAGTAATCGTGGTGATTTTATTGTCACCGGATCTCATGACCGCTCAATTCGCCGCTGGGATCGTACTGAAGAGCAGTTTTTCATTGAGGAAGAAAAGGAGAAAAGGTTAGAGGAAATGTTTGATGCTGATCTTGACAATGCATTTGAAAGCAATTATGCACTGAAGGAAGAAATACCAGAGGAGGGAGCAGTGGCCGTAGCTGGGAAAAAAACCGAGGAAACCCTTACCGCTACAGACTTAATTATTGAGAGATTAGACATTGCAGAAAATGAGAAAAAGCGCATTAGTGAACATCAGGAGGAGGAGAAAATCAATAAAAATGCTGTTTTCCAGGCAAATCCGCTTATGAATGGCCGGTCACCTTCTGATTATGTTCTAAGTGCATTTAAAGATGTTCACTCGAATGATTTGGAGCAAACATTGTTGGCTTTACCTTTTTCAGATGCTTTGAAGCTTTTGTCATACTTGAAAGAATGGACTTCATATTCTGATAAGGTTGAGCTTGTTTGCCGCATAGGCACACTGCTGTTGCAGACACATTACAATCAGTTGCTTTCCACACCAGCTGCCAGACCTGTCTTAACCGACTTCAGTGACATTTTCTATGAGAGAGTCAAGGGTTGGAAAGATATCTTTGGTTTTAACCTTGCAGCCATGGATCATATCCAGCAACTGATGGCTTCAAGATCAGATGCTCTTTTCCGGGATGCAAGATCAAAACTGCTGGAGATACGTTCTCAACAATCCAAACGTTTACAAGATAGGTCAGATACTGGAGAGTTTTTGCGGAAGAAGAAAAAGAAGACAAAGTAA
Protein sequence

>Msa0139350

MVKAYLRYEPSASFGVIASVDSNISYDSSGKHLLSPALEKIGVWHVRQGICIKTLTPSVPCRGPSLAVTSIASSPSQLIAGGYGDGSIRLWDTDKGTCETTLNGHKGAVTALRYNKLGSLLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFVGSGKKLVTSSKDKFLRVWDIDTQHCMQIVGGHHSEIWTLDVDPGERFLVTGSADKELRFYSIKQDSVDGESVKDGGDSSVSNKWDVLTHFGEIQRQSKDRVATVQFNKSGNLLACHVAGKMVEIFRVLDDAEAKRKAKRRVNRKKEKKHGKEATEGTENGDAENKGDNSIVTDGPIETNKTVTVPDVFKLLHTIRASKKICSISFCPTTPKNSLATLALSLNNNLIEFYSIESGETKKTLGIDLEGHRSDVRSVTLSSDNTFLLSTSHNAVKIWNPSTGSCLRTIDSGYGLCSLILPTNKYGLVGTKEGTLEIIDIGSSTRVEAIEAHGGSVRTIAALPDKHGFVTGSQDHDVKFWEYQIKQKPGQATKQLTVSNVKTMRMNDDVLVVAISPDAKYIAVALLDSTVKIHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNIKIWGLDFGDCHKSIFAHKDSVMAVQFVPKTHYVFSVGKDRVVKYWDADKFEQLLTLEGHHADIWCLAVSNRGDFIVTGSHDRSIRRWDRTEEQFFIEEEKEKRLEEMFDADLDNAFESNYALKEEIPEEGAVAVAGKKTEETLTATDLIIERLDIAENEKKRISEHQEEEKINKNAVFQANPLMNGRSPSDYVLSAFKDVHSNDLEQTLLALPFSDALKLLSYLKEWTSYSDKVELVCRIGTLLLQTHYNQLLSTPAARPVLTDFSDIFYERVKGWKDIFGFNLAAMDHIQQLMASRSDALFRDARSKLLEIRSQQSKRLQDRSDTGEFLRKKKKKTK*