Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023510 | sp|Q9M2T9|SYMM_ARATH | 73.311 | 607 | 143 | 4 | 1 | 590 | 1 | 605 | 0.0 | 922 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023510 | Msa0067790 | 0.832190 | 1.088863e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023510 | MtrunA17_Chr1g0212481 | 96.667 | 600 | 20 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1215 |
| Msa0023510 | MtrunA17_Chr1g0152521 | 76.190 | 357 | 28 | 3 | 1 | 349 | 1 | 308 | 0.0 | 536 |
| Msa0023510 | MtrunA17_Chr1g0152511 | 79.518 | 249 | 4 | 2 | 352 | 600 | 1 | 202 | 9.11e-132 | 384 |
| Msa0023510 | MtrunA17_Chr4g0039621 | 27.022 | 581 | 341 | 22 | 59 | 574 | 19 | 581 | 1.29e-46 | 176 |
| Msa0023510 | MtrunA17_Chr4g0068571 | 25.058 | 431 | 259 | 15 | 177 | 567 | 37 | 443 | 6.68e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023510 | AT3G55400.1 | 73.311 | 607 | 143 | 4 | 1 | 590 | 1 | 605 | 0.0 | 922 |
| Msa0023510 | AT3G55400.2 | 74.468 | 517 | 115 | 3 | 1 | 502 | 1 | 515 | 0.0 | 805 |
| Msa0023510 | AT4G13780.1 | 26.049 | 572 | 344 | 19 | 59 | 569 | 20 | 573 | 2.50e-46 | 175 |
Find 196 sgRNAs with CRISPR-Local
Find 530 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATGGCCATATACCATTT+TGG | 0.158244 | 1_1:+44851061 | None:intergenic |
| AAAGATGGCTGCACAAAATT+TGG | 0.164014 | 1_1:+44853409 | None:intergenic |
| CGACGCCATTGCTCGCTTTC+AGG | 0.172482 | 1_1:-44854822 | Msa0023510:intron |
| AACGATTTGGTTAGTAAGTT+TGG | 0.200559 | 1_1:-44849309 | Msa0023510:CDS |
| ATCTTTGTGGACTACTTTGC+TGG | 0.211198 | 1_1:+44855782 | None:intergenic |
| TTCCTCAGAGAGGTGGAATT+TGG | 0.232008 | 1_1:-44849264 | Msa0023510:CDS |
| TGGCAGGAAATCTTCTTAAT+AGG | 0.253659 | 1_1:-44849068 | Msa0023510:intron |
| TGTAATTTGACAGCGGCTTT+TGG | 0.274056 | 1_1:-44854509 | Msa0023510:intron |
| TACGTTTCCATGCCGTTTAT+TGG | 0.277442 | 1_1:-44851118 | Msa0023510:CDS |
| TGGACACACTATTTATATAC+TGG | 0.281972 | 1_1:-44847415 | Msa0023510:three_prime_UTR |
| AGAAGAAGGGAAATGGAAAT+AGG | 0.298158 | 1_1:+44854973 | None:intergenic |
| TGCAGAAGGAAATGCATTTA+AGG | 0.298760 | 1_1:-44848986 | Msa0023510:CDS |
| TTCCCGAGCATCGGTTGATT+GGG | 0.300431 | 1_1:-44852440 | Msa0023510:CDS |
| GTGAGAAAGTGAGAAGGTTC+TGG | 0.302418 | 1_1:+44855696 | None:intergenic |
| GTATGGTTTGATGCTTTACT+AGG | 0.314469 | 1_1:-44852379 | Msa0023510:CDS |
| GAAACAGTGTTTAGTAAATC+AGG | 0.320253 | 1_1:+44851769 | None:intergenic |
| TTCTTTCCTAGACTAGATTA+AGG | 0.322331 | 1_1:-44855808 | Msa0023510:five_prime_UTR |
| TACGCTTGAACCAAACGATT+TGG | 0.323345 | 1_1:-44849322 | Msa0023510:CDS |
| ATCAGCTTGTGAGGCTGTTC+TGG | 0.327249 | 1_1:-44848398 | Msa0023510:CDS |
| CAACTCAAGCTCGGAGTAAC+AGG | 0.327281 | 1_1:+44847840 | None:intergenic |
| TTTCCCGAGCATCGGTTGAT+TGG | 0.328655 | 1_1:-44852441 | Msa0023510:CDS |
| TACCAAGTGGGGTGGACTTA+AGG | 0.328656 | 1_1:-44847675 | Msa0023510:CDS |
| AAGAAAGTTATATTCATTAC+TGG | 0.336572 | 1_1:-44854484 | Msa0023510:CDS |
| TGGGCTAAGCCTTCCCAAAA+TGG | 0.344820 | 1_1:-44851075 | Msa0023510:CDS |
| AACAAAATTAATTCAGAATA+GGG | 0.347104 | 1_1:+44847498 | None:intergenic |
| ATGCTCAACTTGGCTATTCC+AGG | 0.350933 | 1_1:-44847809 | Msa0023510:CDS |
| ATCAACCGATGCTCGGGAAA+TGG | 0.352674 | 1_1:+44852444 | None:intergenic |
| CCAGCTATGCTAATGTCTGC+TGG | 0.359184 | 1_1:-44851095 | Msa0023510:CDS |
| ACCTTAAGCCTTGTGTTTCA+AGG | 0.361855 | 1_1:-44853501 | Msa0023510:CDS |
| ACGATTTGGTTAGTAAGTTT+GGG | 0.362204 | 1_1:-44849308 | Msa0023510:CDS |
| TGAGAAAGTGAGAAGGTTCT+GGG | 0.362681 | 1_1:+44855697 | None:intergenic |
| TCCTTGAAACACAAGGCTTA+AGG | 0.367680 | 1_1:+44853500 | None:intergenic |
| AAACCCCAGAGTGCTTAAAA+TGG | 0.368449 | 1_1:-44855086 | Msa0023510:exon |
| TAATGCTGGTAATTCCTATA+TGG | 0.374295 | 1_1:-44848368 | Msa0023510:CDS |
| CGTCAACGCTCCTCCCCATA+TGG | 0.374953 | 1_1:-44854870 | Msa0023510:CDS |
| AGCCTTCCCAAAATGGTATA+TGG | 0.378595 | 1_1:-44851068 | Msa0023510:CDS |
| CCCAGGTTGCTGCATCAAAT+TGG | 0.382507 | 1_1:+44847784 | None:intergenic |
| GAGAAAGTGCCTTATCTTTG+TGG | 0.383154 | 1_1:+44855769 | None:intergenic |
| CCAGCTACACTGCACTTGAT+TGG | 0.385424 | 1_1:-44851736 | Msa0023510:CDS |
| TGCAACTGCTGCCACTGCTC+AGG | 0.387654 | 1_1:-44854437 | Msa0023510:CDS |
| GAGGTGTGAAACATTGGAAT+TGG | 0.388355 | 1_1:+44855009 | None:intergenic |
| GAAATGGAAATAGGGTTTGT+TGG | 0.388728 | 1_1:+44854982 | None:intergenic |
| ACCAAGTGGGGTGGACTTAA+GGG | 0.391465 | 1_1:-44847674 | Msa0023510:CDS |
| TGGAATAAGCGCTACCCATA+TGG | 0.393918 | 1_1:+44854855 | None:intergenic |
| AAACAAAATTAATTCAGAAT+AGG | 0.397376 | 1_1:+44847497 | None:intergenic |
| CACAAGCTTACAAGACGCTT+TGG | 0.398442 | 1_1:-44854381 | Msa0023510:CDS |
| GAGGTGGAATTTGGCAATGA+TGG | 0.400433 | 1_1:-44849255 | Msa0023510:CDS |
| AACTTACTAACCAAATCGTT+TGG | 0.404070 | 1_1:+44849312 | None:intergenic |
| TGTGAGGCTGTTCTGGAGAT+TGG | 0.410328 | 1_1:-44848391 | Msa0023510:CDS |
| CAGCCTCACAAGCTGATGTC+AGG | 0.412097 | 1_1:+44848404 | None:intergenic |
| AGCAATGGCGTCGGCGGCGA+TGG | 0.415306 | 1_1:+44854832 | None:intergenic |
| CAATTGGGTTACCTTAGGTT+AGG | 0.416217 | 1_1:+44855658 | None:intergenic |
| TTGCAGAAGAAAGCTGCTCT+TGG | 0.421073 | 1_1:+44854950 | None:intergenic |
| AATGAAGTACTGCATCTTGC+CGG | 0.424915 | 1_1:+44855829 | None:intergenic |
| CCAATCAAGTGCAGTGTAGC+TGG | 0.425417 | 1_1:+44851736 | None:intergenic |
| TGTCAGCTGTGAAGAATATA+AGG | 0.426210 | 1_1:-44853806 | Msa0023510:intron |
| CATTTACCGAGCTGATTATG+AGG | 0.426407 | 1_1:-44853839 | Msa0023510:CDS |
| ATTCCTTTACCTCGTGTAAA+CGG | 0.431671 | 1_1:+44853386 | None:intergenic |
| GCACATCTTGCCAATACAAT+TGG | 0.438695 | 1_1:-44849195 | Msa0023510:intron |
| CTCTTGGAGAAGAAGGGAAA+TGG | 0.439070 | 1_1:+44854966 | None:intergenic |
| GAAGAAGGGAAATGGAAATA+GGG | 0.439147 | 1_1:+44854974 | None:intergenic |
| ACCAATTTGATGCAGCAACC+TGG | 0.442225 | 1_1:-44847785 | Msa0023510:CDS |
| GCTCAAAGTACCAATTGTAT+TGG | 0.446015 | 1_1:+44849185 | None:intergenic |
| GCATTATGCATGTGTATGTA+TGG | 0.450630 | 1_1:-44847362 | Msa0023510:intron |
| AAAGCTGCTCTTGGAGAAGA+AGG | 0.453613 | 1_1:+44854959 | None:intergenic |
| TGAGTCTTGTCACTCGGAAC+AGG | 0.454916 | 1_1:+44852412 | None:intergenic |
| TCTTTGTGGACTACTTTGCT+GGG | 0.454979 | 1_1:+44855783 | None:intergenic |
| AATTCACTGCCAGTGTTGAT+TGG | 0.457459 | 1_1:+44849019 | None:intergenic |
| AATAGGGTTTGTTGGATTTG+AGG | 0.459704 | 1_1:+44854990 | None:intergenic |
| AAACAAGCTCAAGAAGTTGT+TGG | 0.459841 | 1_1:-44847536 | Msa0023510:CDS |
| TTTGTCATCATTTGAGGAAG+TGG | 0.461007 | 1_1:+44854922 | None:intergenic |
| GCCCCAATCAACCGATGCTC+GGG | 0.461201 | 1_1:+44852438 | None:intergenic |
| TAAACACTGTTTCTTCAAGT+TGG | 0.465611 | 1_1:-44851759 | Msa0023510:CDS |
| AAACTGAAGTGGAAGACAAA+GGG | 0.469002 | 1_1:-44847601 | Msa0023510:CDS |
| GGAATAAGCGCTACCCATAT+GGG | 0.471131 | 1_1:+44854856 | None:intergenic |
| AAGAAGACTCTGAAAAGTAA+AGG | 0.472328 | 1_1:-44847566 | Msa0023510:CDS |
| CTATTTATATACTGGAACAT+AGG | 0.472427 | 1_1:-44847407 | Msa0023510:three_prime_UTR |
| AGGGGCACGCTCGTCCATAT+AGG | 0.472951 | 1_1:+44848354 | None:intergenic |
| TAGCATAGCTGGCCAATAAA+CGG | 0.473012 | 1_1:+44851106 | None:intergenic |
| CCAGCAGACATTAGCATAGC+TGG | 0.474341 | 1_1:+44851095 | None:intergenic |
| AGAGGGGTTGTGATGACATA+GGG | 0.474816 | 1_1:+44854899 | None:intergenic |
| CTTCAAGCACTTGGTAAGCC+TGG | 0.476943 | 1_1:+44855868 | None:intergenic |
| AGAAGACTCTGAAAAGTAAA+GGG | 0.482397 | 1_1:-44847565 | Msa0023510:CDS |
| ATAGGGTTTGTCATCATTTG+AGG | 0.484471 | 1_1:+44854916 | None:intergenic |
| GCCTTGTGTTTCAAGGAAAG+AGG | 0.485059 | 1_1:-44853494 | Msa0023510:CDS |
| ATGTTAGGATGGTATGAAGA+TGG | 0.485616 | 1_1:-44849361 | Msa0023510:intron |
| AGGTGGAATTTGGCAATGAT+GGG | 0.485834 | 1_1:-44849254 | Msa0023510:CDS |
| CTCCCTGACATCAGCTTGTG+AGG | 0.486304 | 1_1:-44848407 | Msa0023510:CDS |
| TTAGTAAATCAGGTTGCTCC+TGG | 0.489812 | 1_1:+44851779 | None:intergenic |
| GGGTGGACTTAAGGGTGGTC+AGG | 0.492564 | 1_1:-44847666 | Msa0023510:CDS |
| TGCGAAGAACTTCAAGCACT+TGG | 0.494136 | 1_1:+44855859 | None:intergenic |
| TGCCCCAATCAACCGATGCT+CGG | 0.495001 | 1_1:+44852437 | None:intergenic |
| CTGTTACTCCGAGCTTGAGT+TGG | 0.496703 | 1_1:-44847839 | Msa0023510:CDS |
| TGTTAGGATGGTATGAAGAT+GGG | 0.497162 | 1_1:-44849360 | Msa0023510:intron |
| CTGGATCAAAAGTGGCCTGC+GGG | 0.499199 | 1_1:-44852473 | Msa0023510:CDS |
| ACCCTTAAGTCCACCCCACT+TGG | 0.509023 | 1_1:+44847673 | None:intergenic |
| GCAACTGCTGCCACTGCTCA+GGG | 0.510604 | 1_1:-44854436 | Msa0023510:CDS |
| ATGAGATTGCAGTGGTCAGT+AGG | 0.514173 | 1_1:+44854406 | None:intergenic |
| TAAGGACAATGTAGCGAGGC+TGG | 0.515013 | 1_1:-44848968 | Msa0023510:intron |
| AGACTCAGACTATATATGTA+TGG | 0.517740 | 1_1:-44852396 | Msa0023510:CDS |
| ACTTAAGGGTGGTCAGGTCA+TGG | 0.517933 | 1_1:-44847660 | Msa0023510:CDS |
| CAAAGTAGTCCACAAAGATA+AGG | 0.518051 | 1_1:-44855778 | Msa0023510:five_prime_UTR |
| TGCTTCTGAAGCAGCTGCCA+AGG | 0.518475 | 1_1:-44848305 | Msa0023510:intron |
| GGATTTGAGGTGTGAAACAT+TGG | 0.518965 | 1_1:+44855003 | None:intergenic |
| ATTGGAACGGAGTGAAAGAA+TGG | 0.519846 | 1_1:+44855027 | None:intergenic |
| CTATTTGGTGCAGGATGAGA+AGG | 0.519918 | 1_1:-44853554 | Msa0023510:intron |
| AAGAGGGGTTGTGATGACAT+AGG | 0.521343 | 1_1:+44854898 | None:intergenic |
| TATGGTTTGATGCTTTACTA+GGG | 0.525816 | 1_1:-44852378 | Msa0023510:intron |
| TGAGATTGCAGTGGTCAGTA+GGG | 0.526148 | 1_1:+44854407 | None:intergenic |
| AATCTTCTTAATAGGACTCT+AGG | 0.528211 | 1_1:-44849060 | Msa0023510:CDS |
| ATCCTAGCAAAGACTGGTTG+AGG | 0.529078 | 1_1:+44847632 | None:intergenic |
| CCTTGGTCTCTCTTTAAGCA+AGG | 0.530338 | 1_1:-44848334 | Msa0023510:CDS |
| CAGCTATGCTAATGTCTGCT+GGG | 0.530697 | 1_1:-44851094 | Msa0023510:CDS |
| GAGAAAGTGAGAAGGTTCTG+GGG | 0.531176 | 1_1:+44855698 | None:intergenic |
| TGCTGCATCAAATTGGTCCC+TGG | 0.531484 | 1_1:+44847791 | None:intergenic |
| GTTCTGGAGATTGGTAATGC+TGG | 0.538081 | 1_1:-44848382 | Msa0023510:CDS |
| CCCAAAATGGTATATGGCCA+TGG | 0.540455 | 1_1:-44851062 | Msa0023510:CDS |
| TCCCGAGCATCGGTTGATTG+GGG | 0.545821 | 1_1:-44852439 | Msa0023510:CDS |
| CCAATTTGATGCAGCAACCT+GGG | 0.549013 | 1_1:-44847784 | Msa0023510:intron |
| AAGTTCTTCGCAAAGCTCAC+CGG | 0.549488 | 1_1:-44855848 | Msa0023510:five_prime_UTR |
| GTCAAAATATCAGAAGTCAC+TGG | 0.550500 | 1_1:-44853452 | Msa0023510:CDS |
| ATGAAGATGGGCAAGTCACT+AGG | 0.550900 | 1_1:-44849348 | Msa0023510:CDS |
| ATATGGACGAGCGTGCCCCT+TGG | 0.551543 | 1_1:-44848351 | Msa0023510:CDS |
| GTCAACGCTCCTCCCCATAT+GGG | 0.558349 | 1_1:-44854869 | Msa0023510:CDS |
| CTGTCTCTAATATAATTACA+AGG | 0.560785 | 1_1:+44847889 | None:intergenic |
| GAGCGTTGACGTAGTAAAGA+GGG | 0.565097 | 1_1:+44854882 | None:intergenic |
| ACCTCGTGTAAACGGAAAGA+TGG | 0.565307 | 1_1:+44853394 | None:intergenic |
| AACCTCAACCAGTCTTTGCT+AGG | 0.566335 | 1_1:-44847634 | Msa0023510:CDS |
| TATATTCTCCAACTCAAGCT+CGG | 0.567513 | 1_1:+44847831 | None:intergenic |
| ATCAGCACTAGCTGATGACC+AGG | 0.568431 | 1_1:-44851797 | Msa0023510:CDS |
| ATACTTCTTCCTCAGAGAGG+TGG | 0.569549 | 1_1:-44849271 | Msa0023510:CDS |
| AAAGCGAGCAATGGCGTCGG+CGG | 0.570755 | 1_1:+44854826 | None:intergenic |
| ATACCTTTGTCAAGAATCCA+TGG | 0.573946 | 1_1:+44851045 | None:intergenic |
| GATTGAAAATCAAACTGAAG+TGG | 0.574353 | 1_1:-44847612 | Msa0023510:CDS |
| TCCTCTTTCCTTGAAACACA+AGG | 0.575285 | 1_1:+44853493 | None:intergenic |
| TAAATTTCTAGGTTCAAACC+TGG | 0.577775 | 1_1:-44852492 | Msa0023510:intron |
| GTTCAAACCTGGATCAAAAG+TGG | 0.577799 | 1_1:-44852481 | Msa0023510:CDS |
| TTGAAACACAAGGCTTAAGG+TGG | 0.578255 | 1_1:+44853503 | None:intergenic |
| AATGGCGTCGGCGGCGATGG+TGG | 0.578592 | 1_1:+44854835 | None:intergenic |
| ACTTTCTCACTCACTCTCGC+TGG | 0.578912 | 1_1:-44855683 | Msa0023510:five_prime_UTR |
| TACACTGCACTTGATTGGTA+AGG | 0.579282 | 1_1:-44851731 | Msa0023510:intron |
| TGCTCAACTTGGCTATTCCA+GGG | 0.580797 | 1_1:-44847808 | Msa0023510:CDS |
| TGGGCTCCTTAATCTAGTCT+AGG | 0.583726 | 1_1:+44855802 | None:intergenic |
| GGAGCGTTGACGTAGTAAAG+AGG | 0.584392 | 1_1:+44854881 | None:intergenic |
| ATTGCAGTGGTCAGTAGGGG+TGG | 0.588624 | 1_1:+44854411 | None:intergenic |
| TATTCGAGAGTGCTTGCCAA+CGG | 0.591306 | 1_1:-44853865 | Msa0023510:CDS |
| AATTCCACTACGGCTGCAGA+AGG | 0.591965 | 1_1:-44849000 | Msa0023510:CDS |
| GAAGACAAAGGGGTTGCAGT+TGG | 0.593044 | 1_1:-44847590 | Msa0023510:CDS |
| AGCCTCACAAGCTGATGTCA+GGG | 0.594895 | 1_1:+44848405 | None:intergenic |
| TGGAGAATATATGCTCAACT+TGG | 0.596758 | 1_1:-44847819 | Msa0023510:CDS |
| TAGCTGGCCAATAAACGGCA+TGG | 0.600474 | 1_1:+44851111 | None:intergenic |
| AGCTCGGTAAATGTCACCGT+TGG | 0.600769 | 1_1:+44853849 | None:intergenic |
| ACACAAGGCTTAAGGTGGAT+CGG | 0.602973 | 1_1:+44853508 | None:intergenic |
| CAAACTGAAGTGGAAGACAA+AGG | 0.603151 | 1_1:-44847602 | Msa0023510:CDS |
| ATTTACCGAGCTGATTATGA+GGG | 0.603837 | 1_1:-44853838 | Msa0023510:CDS |
| CCTTGCTTAAAGAGAGACCA+AGG | 0.604022 | 1_1:+44848334 | None:intergenic |
| AAAGAACTGCCAATCAACAC+TGG | 0.604833 | 1_1:-44849028 | Msa0023510:CDS |
| CAAGCATGAAGCAGTTGTGA+AGG | 0.607264 | 1_1:-44853893 | Msa0023510:CDS |
| AAATTCCCTCATAATCAGCT+CGG | 0.616005 | 1_1:+44853833 | None:intergenic |
| GAGTGAGTGAGAAAGTGAGA+AGG | 0.616614 | 1_1:+44855690 | None:intergenic |
| GGGAAATGGAAAAGTCCCGC+AGG | 0.620262 | 1_1:+44852458 | None:intergenic |
| AGGGGTGGAACCCTGAGCAG+TGG | 0.628300 | 1_1:+44854426 | None:intergenic |
| GTGAAACATTGGAATTGGAA+CGG | 0.630511 | 1_1:+44855014 | None:intergenic |
| ATTTCCTTCTGCAGCCGTAG+TGG | 0.632038 | 1_1:+44848996 | None:intergenic |
| AGGTACCTGAAAGCGAGCAA+TGG | 0.633951 | 1_1:+44854817 | None:intergenic |
| CTGAAAGCGAGCAATGGCGT+CGG | 0.634768 | 1_1:+44854823 | None:intergenic |
| TCTCGCTGGAACCTAACCTA+AGG | 0.636322 | 1_1:-44855669 | Msa0023510:intron |
| AAGCTGCTCTTGGAGAAGAA+GGG | 0.636630 | 1_1:+44854960 | None:intergenic |
| GCCATCTTTCCGTTTACACG+AGG | 0.638336 | 1_1:-44853395 | Msa0023510:intron |
| TAGAGAGATACCAAGTGGGG+TGG | 0.641306 | 1_1:-44847683 | Msa0023510:CDS |
| AACTGAAGTGGAAGACAAAG+GGG | 0.642983 | 1_1:-44847600 | Msa0023510:CDS |
| ATTACTGGCACCGATGAACA+CGG | 0.647036 | 1_1:-44854469 | Msa0023510:CDS |
| ATAGTCTGAGTCTTGTCACT+CGG | 0.651357 | 1_1:+44852406 | None:intergenic |
| CAATGATGGGGACTATTCAG+AGG | 0.651752 | 1_1:-44849241 | Msa0023510:CDS |
| ACTGGCAGTGAATTCCACTA+CGG | 0.653538 | 1_1:-44849010 | Msa0023510:CDS |
| GAGATTGCAGTGGTCAGTAG+GGG | 0.659757 | 1_1:+44854408 | None:intergenic |
| TGCCAAATTCCACCTCTCTG+AGG | 0.662782 | 1_1:+44849262 | None:intergenic |
| ATTGTAGAGAGATACCAAGT+GGG | 0.663995 | 1_1:-44847687 | Msa0023510:intron |
| CCTGGATCAAAAGTGGCCTG+CGG | 0.665415 | 1_1:-44852474 | Msa0023510:CDS |
| TGGTCTCTCTTTAAGCAAGG+AGG | 0.665745 | 1_1:-44848331 | Msa0023510:CDS |
| CATTGTAGAGAGATACCAAG+TGG | 0.666340 | 1_1:-44847688 | Msa0023510:intron |
| CTTGCTTAAAGAGAGACCAA+GGG | 0.666502 | 1_1:+44848335 | None:intergenic |
| TAGATACTTCTTCCTCAGAG+AGG | 0.671329 | 1_1:-44849274 | Msa0023510:CDS |
| GGTGGAATTTGGCAATGATG+GGG | 0.671855 | 1_1:-44849253 | Msa0023510:CDS |
| TGGCCATGGATTCTTGACAA+AGG | 0.674126 | 1_1:-44851048 | Msa0023510:intron |
| GGAGAGTGAGTTCAGCGATG+AGG | 0.676849 | 1_1:+44855719 | None:intergenic |
| AAAATATCAGAAGTCACTGG+AGG | 0.677971 | 1_1:-44853449 | Msa0023510:CDS |
| GAATAAGCGCTACCCATATG+GGG | 0.679075 | 1_1:+44854857 | None:intergenic |
| AGCGTTGACGTAGTAAAGAG+GGG | 0.697798 | 1_1:+44854883 | None:intergenic |
| AGTAACAGGAGATAGTGCAA+TGG | 0.702926 | 1_1:+44847854 | None:intergenic |
| TTGTAGAGAGATACCAAGTG+GGG | 0.703831 | 1_1:-44847686 | Msa0023510:intron |
| CATTTAAGGACAATGTAGCG+AGG | 0.708225 | 1_1:-44848972 | Msa0023510:CDS |
| TTGCTTAAAGAGAGACCAAG+GGG | 0.714060 | 1_1:+44848336 | None:intergenic |
| TAAGCGCTACCCATATGGGG+AGG | 0.721159 | 1_1:+44854860 | None:intergenic |
| AAGTGGGGTGGACTTAAGGG+TGG | 0.722735 | 1_1:-44847671 | Msa0023510:CDS |
| CTTGTGAAATGAGATTGCAG+TGG | 0.809288 | 1_1:+44854398 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCAATTATTTTAACTT+TGG | + | chr1_1:44847943-44847962 | None:intergenic | 10.0% |
| !! | AAGTTAAAATAATTGAAAAA+TGG | - | chr1_1:44847943-44847962 | Msa0023510:intron | 10.0% |
| !! | AACTTGAATAATTAAAATTT+CGG | + | chr1_1:44849187-44849206 | None:intergenic | 10.0% |
| !!! | CTATAAGTTTATATTTTATA+AGG | - | chr1_1:44850186-44850205 | Msa0023510:intron | 10.0% |
| !! | TAATTTCTATATAAATTTCT+AGG | - | chr1_1:44850686-44850705 | Msa0023510:intron | 10.0% |
| !! | AAAAAATGTATGTTAAAAAT+AGG | + | chr1_1:44851593-44851612 | None:intergenic | 10.0% |
| !! | AATCAATTACTAATATTATA+TGG | - | chr1_1:44851963-44851982 | Msa0023510:intron | 10.0% |
| !! | ATAAACATAAGATAATAAAT+AGG | + | chr1_1:44852181-44852200 | None:intergenic | 10.0% |
| !!! | CTAGTTTTTTTTTTTAAAAA+AGG | + | chr1_1:44852837-44852856 | None:intergenic | 10.0% |
| !! | TATAATAATAGTACTTATAT+TGG | - | chr1_1:44853384-44853403 | Msa0023510:intron | 10.0% |
| !!! | TTTTTTATTTTGAAAATGTT+AGG | - | chr1_1:44853813-44853832 | Msa0023510:CDS | 10.0% |
| !!! | ATAACTATTTCATTTTTATT+AGG | + | chr1_1:44854514-44854533 | None:intergenic | 10.0% |
| !! | AATAATGTTACAAATATTAT+TGG | + | chr1_1:44855023-44855042 | None:intergenic | 10.0% |
| !! | TAAAAGTTATTATCTAACTT+TGG | - | chr1_1:44848639-44848658 | Msa0023510:intron | 15.0% |
| !! | ATCATTATAGTCATTTATTA+AGG | - | chr1_1:44848881-44848900 | Msa0023510:intron | 15.0% |
| !!! | TAATGTTTTAATTGAATAGT+CGG | + | chr1_1:44849044-44849063 | None:intergenic | 15.0% |
| !!! | TAGAATATTCTTATTCTTTT+AGG | + | chr1_1:44850108-44850127 | None:intergenic | 15.0% |
| !! | AAAAAGAAATACAAATACAA+AGG | - | chr1_1:44850428-44850447 | Msa0023510:intron | 15.0% |
| !!! | TTTATTTTGCTTTAACATTA+TGG | - | chr1_1:44850597-44850616 | Msa0023510:intron | 15.0% |
| !!! | AATATTTAAAGGTATAATAG+TGG | - | chr1_1:44851183-44851202 | Msa0023510:intron | 15.0% |
| !! | CAATGATTTATAACTATAAA+GGG | + | chr1_1:44851878-44851897 | None:intergenic | 15.0% |
| !! | ATAAATCCAAATTCAATAAA+TGG | + | chr1_1:44852595-44852614 | None:intergenic | 15.0% |
| !!! | ATTTAATTTGATCAAATATC+AGG | + | chr1_1:44855087-44855106 | None:intergenic | 15.0% |
| !! | ATAAGTGAAAATTCTTTATT+AGG | + | chr1_1:44855265-44855284 | None:intergenic | 15.0% |
| !! | AACAAAATTAATTCAGAATA+GGG | + | chr1_1:44855694-44855713 | None:intergenic | 15.0% |
| !! | AAACAAAATTAATTCAGAAT+AGG | + | chr1_1:44855695-44855714 | None:intergenic | 15.0% |
| !!! | AATTTCGATATTTTTCTTTT+TGG | - | chr1_1:44855864-44855883 | Msa0023510:five_prime_UTR | 15.0% |
| !!! | ATTTCGATATTTTTCTTTTT+GGG | - | chr1_1:44855865-44855884 | Msa0023510:five_prime_UTR | 15.0% |
| !!! | AGGAAGAAGATAAATATTTT+TGG | + | chr1_1:44847658-44847677 | None:intergenic | 20.0% |
| !!! | AAAAATATGATTGTTTTTGC+AGG | + | chr1_1:44847835-44847854 | None:intergenic | 20.0% |
| !!! | TAAAAAGAATTATTCTGAGA+CGG | + | chr1_1:44848424-44848443 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTCAA+TGG | + | chr1_1:44848522-44848541 | None:intergenic | 20.0% |
| !! | TTCTAAATAATAGTCGTTTA+AGG | + | chr1_1:44848570-44848589 | None:intergenic | 20.0% |
| !! | AAGAAAGTTATATTCATTAC+TGG | - | chr1_1:44848705-44848724 | Msa0023510:intron | 20.0% |
| !! | CTACTTGAAAAAAAAAGTAA+GGG | + | chr1_1:44848855-44848874 | None:intergenic | 20.0% |
| !! | ACTACTTGAAAAAAAAAGTA+AGG | + | chr1_1:44848856-44848875 | None:intergenic | 20.0% |
| !! | TTGAAAAATGACTAAATTGA+CGG | + | chr1_1:44848969-44848988 | None:intergenic | 20.0% |
| !! | GACTATTCAATTAAAACATT+AGG | - | chr1_1:44849043-44849062 | Msa0023510:CDS | 20.0% |
| !!! | TGATGCATTTTTAGTAAATA+TGG | - | chr1_1:44849071-44849090 | Msa0023510:intron | 20.0% |
| !! | TCTAATTACAATCCTTTAAT+AGG | - | chr1_1:44849519-44849538 | Msa0023510:intron | 20.0% |
| !! | ATTTCTCATATAATTTAAGC+TGG | - | chr1_1:44849885-44849904 | Msa0023510:intron | 20.0% |
| !!! | TTTTCATTAAAGTGATTCTT+TGG | - | chr1_1:44850226-44850245 | Msa0023510:intron | 20.0% |
| !! | AAGTTAGAGTTAATCAATTT+GGG | + | chr1_1:44850297-44850316 | None:intergenic | 20.0% |
| !! | AAAGTTAGAGTTAATCAATT+TGG | + | chr1_1:44850298-44850317 | None:intergenic | 20.0% |
| !! | AGATTAATAAAACAAACACA+CGG | + | chr1_1:44850337-44850356 | None:intergenic | 20.0% |
| !! | TTAAGTGATTAAATTCAGAT+GGG | + | chr1_1:44850401-44850420 | None:intergenic | 20.0% |
| !! | ATTAAGTGATTAAATTCAGA+TGG | + | chr1_1:44850402-44850421 | None:intergenic | 20.0% |
| !! | GAATTTAATCACTTAATGTA+AGG | - | chr1_1:44850405-44850424 | Msa0023510:intron | 20.0% |
| !!! | AAATACAAAGGTGTTTTATT+TGG | - | chr1_1:44850440-44850459 | Msa0023510:intron | 20.0% |
| !! | ATTATGCACAATTATTTGTA+TGG | - | chr1_1:44850962-44850981 | Msa0023510:intron | 20.0% |
| !! | GGATCAAATTCAATATTTAA+AGG | - | chr1_1:44851172-44851191 | Msa0023510:intron | 20.0% |
| !! | AAAAAAATAGGAAAGAAAAG+AGG | + | chr1_1:44851491-44851510 | None:intergenic | 20.0% |
| !! | AGAGAGAGATTTAAAAAAAT+AGG | + | chr1_1:44851503-44851522 | None:intergenic | 20.0% |
| !! | ATATTTCTCACTTAAGAAAA+GGG | + | chr1_1:44851621-44851640 | None:intergenic | 20.0% |
| !! | TATATTTCTCACTTAAGAAA+AGG | + | chr1_1:44851622-44851641 | None:intergenic | 20.0% |
| !! | CAAAACGATAGAAAATAAAA+AGG | + | chr1_1:44851691-44851710 | None:intergenic | 20.0% |
| !! | CCAATGATTTATAACTATAA+AGG | + | chr1_1:44851879-44851898 | None:intergenic | 20.0% |
| !! | CCTTTATAGTTATAAATCAT+TGG | - | chr1_1:44851876-44851895 | Msa0023510:intron | 20.0% |
| !! | CAAGTTCATTATTTCATTAA+TGG | - | chr1_1:44852025-44852044 | Msa0023510:intron | 20.0% |
| !! | TTATCTTATGTTTATTCTTG+AGG | - | chr1_1:44852186-44852205 | Msa0023510:intron | 20.0% |
| !! | TTCATTCCATTTATTGAATT+TGG | - | chr1_1:44852586-44852605 | Msa0023510:intron | 20.0% |
| !!! | TTTTTTACGATACTATCATT+AGG | + | chr1_1:44852664-44852683 | None:intergenic | 20.0% |
| !! | ATACTTGTATTATTAACCAT+TGG | - | chr1_1:44852974-44852993 | Msa0023510:intron | 20.0% |
| !! | GCATAAGAATGATAAAAAAA+TGG | + | chr1_1:44853278-44853297 | None:intergenic | 20.0% |
| !! | TAAATAGTTCAATAACATTG+AGG | - | chr1_1:44853334-44853353 | Msa0023510:intron | 20.0% |
| !!! | GAAAACTATATAAAGCATTA+AGG | + | chr1_1:44853422-44853441 | None:intergenic | 20.0% |
| !! | ATAATCTTAACAAGTTTACA+AGG | + | chr1_1:44853626-44853645 | None:intergenic | 20.0% |
| !!! | TGTAAACTTGTTAAGATTAT+CGG | - | chr1_1:44853626-44853645 | Msa0023510:intron | 20.0% |
| !! | AGTAATAGTAATTTGATTGT+TGG | - | chr1_1:44853699-44853718 | Msa0023510:intron | 20.0% |
| !!! | TTATTTTGAAAATGTTAGGA+TGG | - | chr1_1:44853817-44853836 | Msa0023510:CDS | 20.0% |
| !! | AGATGAAAAGAAGAAAAATA+TGG | - | chr1_1:44854392-44854411 | Msa0023510:CDS | 20.0% |
| !! | TATTCAACTTAGATTGTTAT+AGG | - | chr1_1:44854415-44854434 | Msa0023510:CDS | 20.0% |
| !!! | TGATCAATATTTACTTTTGT+AGG | - | chr1_1:44854728-44854747 | Msa0023510:intron | 20.0% |
| !! | AACTTCATACAATAAAATGT+TGG | - | chr1_1:44854933-44854952 | Msa0023510:CDS | 20.0% |
| !! | ATTATAAAAGATAGATTCAG+TGG | - | chr1_1:44855040-44855059 | Msa0023510:CDS | 20.0% |
| !! | TTAATGTGAGAAAAGAAAAA+GGG | + | chr1_1:44855123-44855142 | None:intergenic | 20.0% |
| !! | ATTAATGTGAGAAAAGAAAA+AGG | + | chr1_1:44855124-44855143 | None:intergenic | 20.0% |
| !!! | AGAATTTTCACTTATGATAT+TGG | - | chr1_1:44855270-44855289 | Msa0023510:intron | 20.0% |
| !!! | TGTGTACACAATTTTTTTTT+TGG | - | chr1_1:44855754-44855773 | Msa0023510:five_prime_UTR | 20.0% |
| !! | TAAAAATAGTGATTTTCACC+AGG | - | chr1_1:44847303-44847322 | Msa0023510:three_prime_UTR | 25.0% |
| !!! | AATTCTAAAACCCTAAAACA+AGG | + | chr1_1:44847591-44847610 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGGGTTTTAGAAT+TGG | - | chr1_1:44847590-44847609 | Msa0023510:CDS | 25.0% |
| ! | TACACCTTTATAAATGTCAA+GGG | - | chr1_1:44847689-44847708 | Msa0023510:intron | 25.0% |
| ! | AAAACCCTTGACATTTATAA+AGG | + | chr1_1:44847696-44847715 | None:intergenic | 25.0% |
| ! | AATAACATGACATAGAATGA+AGG | - | chr1_1:44848011-44848030 | Msa0023510:intron | 25.0% |
| ! | AAATTTGTGGTGAAATGAAT+AGG | + | chr1_1:44848395-44848414 | None:intergenic | 25.0% |
| ! | GGAAAAAAAGTTATAACAGT+GGG | + | chr1_1:44848501-44848520 | None:intergenic | 25.0% |
| ! | TGGAAAAAAAGTTATAACAG+TGG | + | chr1_1:44848502-44848521 | None:intergenic | 25.0% |
| ! | GACTATTATTTAGAAACAGA+GGG | - | chr1_1:44848575-44848594 | Msa0023510:intron | 25.0% |
| !! | ACAGCAATTTTGTAAATTTG+AGG | + | chr1_1:44848922-44848941 | None:intergenic | 25.0% |
| !! | ATTGACTTTCTTTGATGTAT+AGG | - | chr1_1:44849104-44849123 | Msa0023510:intron | 25.0% |
| !! | TACTTTGATAGTTCGTAAAA+TGG | - | chr1_1:44849129-44849148 | Msa0023510:intron | 25.0% |
| ! | GTTATCTATCTTCCTATTAA+AGG | + | chr1_1:44849534-44849553 | None:intergenic | 25.0% |
| !! | TTGAAGAATGTATTGCTATT+TGG | - | chr1_1:44849620-44849639 | Msa0023510:intron | 25.0% |
| !! | TTTAGGATTTGTGTAATGTA+AGG | + | chr1_1:44850091-44850110 | None:intergenic | 25.0% |
| ! | TCTTTGGTCATTACATATAT+TGG | - | chr1_1:44850242-44850261 | Msa0023510:intron | 25.0% |
| ! | CTTTGGTCATTACATATATT+GGG | - | chr1_1:44850243-44850262 | Msa0023510:intron | 25.0% |
| !! | AGCATTATTCCACTAATTTT+GGG | + | chr1_1:44850501-44850520 | None:intergenic | 25.0% |
| !! | AAGCATTATTCCACTAATTT+TGG | + | chr1_1:44850502-44850521 | None:intergenic | 25.0% |
| ! | CAGTTTCTGTTTAACATTAT+CGG | - | chr1_1:44850898-44850917 | Msa0023510:intron | 25.0% |
| !!! | AAACGACTATTATTTTGAGA+CGG | + | chr1_1:44851039-44851058 | None:intergenic | 25.0% |
| ! | CTCAAAATAATAGTCGTTTA+AGG | - | chr1_1:44851040-44851059 | Msa0023510:intron | 25.0% |
| ! | CTCTTATTAATTGTAGTTAG+TGG | - | chr1_1:44851137-44851156 | Msa0023510:intron | 25.0% |
| ! | TAATGACAAGTGGATAAAAA+TGG | + | chr1_1:44851717-44851736 | None:intergenic | 25.0% |
| !!! | TTCTCGTTTTATTTTTTTGG+AGG | + | chr1_1:44852519-44852538 | None:intergenic | 25.0% |
| !!! | GCATTCTCGTTTTATTTTTT+TGG | + | chr1_1:44852522-44852541 | None:intergenic | 25.0% |
| ! | CTTGAAAATTCAGAAATCAT+CGG | + | chr1_1:44852716-44852735 | None:intergenic | 25.0% |
| !!! | ATAAAACTTGCTAACACTAT+TGG | + | chr1_1:44853504-44853523 | None:intergenic | 25.0% |
| ! | TAAGAAGTAATGTCATGATT+TGG | + | chr1_1:44853557-44853576 | None:intergenic | 25.0% |
| ! | TGACATTACTTCTTAAAATC+TGG | - | chr1_1:44853562-44853581 | Msa0023510:intron | 25.0% |
| ! | TGAAGACCATAAACTAAATT+TGG | - | chr1_1:44853724-44853743 | Msa0023510:intron | 25.0% |
| ! | GAAGACCATAAACTAAATTT+GGG | - | chr1_1:44853725-44853744 | Msa0023510:intron | 25.0% |
| !! | ATAAGCCCAAATTTAGTTTA+TGG | + | chr1_1:44853733-44853752 | None:intergenic | 25.0% |
| !! | CGAAATCTCTTTCAATATTT+TGG | - | chr1_1:44854101-44854120 | Msa0023510:intron | 25.0% |
| !! | TAGCATGAATACAATTTTCT+GGG | + | chr1_1:44854471-44854490 | None:intergenic | 25.0% |
| !! | CAATTTAGAACACAAACAAA+GGG | + | chr1_1:44854620-44854639 | None:intergenic | 25.0% |
| !! | ACAATTTAGAACACAAACAA+AGG | + | chr1_1:44854621-44854640 | None:intergenic | 25.0% |
| ! | GTTTATGTAATATATGTTCG+AGG | + | chr1_1:44854916-44854935 | None:intergenic | 25.0% |
| ! | AATATCAGGTAAAGATTTAG+TGG | + | chr1_1:44855073-44855092 | None:intergenic | 25.0% |
| ! | TAATGTGAGAAAAGAAAAAG+GGG | + | chr1_1:44855122-44855141 | None:intergenic | 25.0% |
| ! | ATGCTTATTATACTTGGTTA+AGG | + | chr1_1:44855196-44855215 | None:intergenic | 25.0% |
| ! | TGGAATATGCTTATTATACT+TGG | + | chr1_1:44855202-44855221 | None:intergenic | 25.0% |
| ! | CTGTCTCTAATATAATTACA+AGG | + | chr1_1:44855303-44855322 | None:intergenic | 25.0% |
| !!! | TAGTTTTACATTACAGAAGT+TGG | + | chr1_1:44855721-44855740 | None:intergenic | 25.0% |
| ! | CTATTTATATACTGGAACAT+AGG | - | chr1_1:44855782-44855801 | Msa0023510:five_prime_UTR | 25.0% |
| TTCTTTCCTAGACTAGATTA+AGG | - | chr1_1:44847381-44847400 | Msa0023510:intron | 30.0% | |
| GAGAAATTGGAGAATCAATT+GGG | + | chr1_1:44847549-44847568 | None:intergenic | 30.0% | |
| !! | ATTTTTGGACAGAGAAAGAA+AGG | + | chr1_1:44847643-44847662 | None:intergenic | 30.0% |
| GTACACCTTTATAAATGTCA+AGG | - | chr1_1:44847688-44847707 | Msa0023510:intron | 30.0% | |
| AGTGTCTTTGTTCTTTGTAT+GGG | + | chr1_1:44847728-44847747 | None:intergenic | 30.0% | |
| CGACTATTATTTAGAAACAG+AGG | - | chr1_1:44848574-44848593 | Msa0023510:intron | 30.0% | |
| GAGTATTATCTAACTTTCGT+GGG | - | chr1_1:44848597-44848616 | Msa0023510:intron | 30.0% | |
| CGTTATATGTAATTTGACAG+CGG | - | chr1_1:44848673-44848692 | Msa0023510:intron | 30.0% | |
| CTTGAAAAAAAAAGTAAGGG+TGG | + | chr1_1:44848852-44848871 | None:intergenic | 30.0% | |
| ! | TTTGATAGTTCGTAAAATGG+AGG | - | chr1_1:44849132-44849151 | Msa0023510:intron | 30.0% |
| ! | AAATTTAGGGTCAAGCAATT+TGG | + | chr1_1:44849159-44849178 | None:intergenic | 30.0% |
| AATTTCGGTCCTCAAATTTA+GGG | + | chr1_1:44849172-44849191 | None:intergenic | 30.0% | |
| AAATTTCGGTCCTCAAATTT+AGG | + | chr1_1:44849173-44849192 | None:intergenic | 30.0% | |
| !!! | AAGGTGATAGTTTTAACTTG+AGG | - | chr1_1:44849402-44849421 | Msa0023510:intron | 30.0% |
| TACAAGCTCTTTACTTAGAA+GGG | - | chr1_1:44849464-44849483 | Msa0023510:intron | 30.0% | |
| !! | GAGTTCATTTTTCTCTTATC+TGG | - | chr1_1:44849829-44849848 | Msa0023510:intron | 30.0% |
| ATTCTATGTTTCTCAAGTCT+TGG | - | chr1_1:44850029-44850048 | Msa0023510:intron | 30.0% | |
| ! | TAATCAATTTGGGATGCTAT+TGG | + | chr1_1:44850287-44850306 | None:intergenic | 30.0% |
| ! | GCATTATTCCACTAATTTTG+GGG | + | chr1_1:44850500-44850519 | None:intergenic | 30.0% |
| TCCATATCATCTCTTTCAAA+TGG | - | chr1_1:44850560-44850579 | Msa0023510:intron | 30.0% | |
| CCATATCATCTCTTTCAAAT+GGG | - | chr1_1:44850561-44850580 | Msa0023510:intron | 30.0% | |
| ! | TAAATTTCTAGGTTCAAACC+TGG | - | chr1_1:44850697-44850716 | Msa0023510:intron | 30.0% |
| AGACTCAGACTATATATGTA+TGG | - | chr1_1:44850793-44850812 | Msa0023510:intron | 30.0% | |
| TATGGTTTGATGCTTTACTA+GGG | - | chr1_1:44850811-44850830 | Msa0023510:intron | 30.0% | |
| GAAATCTAATAAAAGAGCCA+GGG | + | chr1_1:44850879-44850898 | None:intergenic | 30.0% | |
| TGAAATCTAATAAAAGAGCC+AGG | + | chr1_1:44850880-44850899 | None:intergenic | 30.0% | |
| TATAAAGTATAGCAGAAGTG+TGG | + | chr1_1:44851007-44851026 | None:intergenic | 30.0% | |
| !!! | ATTGACGATTATTTTGAGAC+AGG | - | chr1_1:44851243-44851262 | Msa0023510:intron | 30.0% |
| AGGGAATATCTTTCATCAAT+TGG | - | chr1_1:44851299-44851318 | Msa0023510:intron | 30.0% | |
| TGTTCAACAAGAGTTTAGTA+AGG | + | chr1_1:44851336-44851355 | None:intergenic | 30.0% | |
| AGCTGCACATATAAAAAGAA+AGG | + | chr1_1:44851368-44851387 | None:intergenic | 30.0% | |
| GAAACAGTGTTTAGTAAATC+AGG | + | chr1_1:44851423-44851442 | None:intergenic | 30.0% | |
| ! | TAAACACTGTTTCTTCAAGT+TGG | - | chr1_1:44851430-44851449 | Msa0023510:intron | 30.0% |
| !! | TCTTAACTTGTTAAGGTAGA+AGG | - | chr1_1:44851654-44851673 | Msa0023510:intron | 30.0% |
| TAAGAGAGAATAATGACAAG+TGG | + | chr1_1:44851727-44851746 | None:intergenic | 30.0% | |
| TATAGTCAATCCCAAATACT+AGG | - | chr1_1:44851745-44851764 | Msa0023510:CDS | 30.0% | |
| ! | ATAGCCTTTTCCTAGTATTT+GGG | + | chr1_1:44851758-44851777 | None:intergenic | 30.0% |
| AAAAGGCTATCATACTTGTT+CGG | - | chr1_1:44851768-44851787 | Msa0023510:CDS | 30.0% | |
| ! | CACAAAAATACAGATGGATT+TGG | + | chr1_1:44851841-44851860 | None:intergenic | 30.0% |
| !! | ATCCATCTGTATTTTTGTGA+TGG | - | chr1_1:44851842-44851861 | Msa0023510:intron | 30.0% |
| AACCATCACAAAAATACAGA+TGG | + | chr1_1:44851847-44851866 | None:intergenic | 30.0% | |
| GAATGCATTGTGTAAGTAAT+AGG | + | chr1_1:44852006-44852025 | None:intergenic | 30.0% | |
| !!! | TAATGGTTTTGTTACTCTGT+AGG | - | chr1_1:44852042-44852061 | Msa0023510:intron | 30.0% |
| !! | TTGACAAAGGTATTAGTACT+CGG | - | chr1_1:44852154-44852173 | Msa0023510:intron | 30.0% |
| TGTTTATTCTTGAGGTAACT+TGG | - | chr1_1:44852194-44852213 | Msa0023510:intron | 30.0% | |
| TGATATAGCAGAGATTGAAA+TGG | + | chr1_1:44852555-44852574 | None:intergenic | 30.0% | |
| ! | CGATGATTTCTGAATTTTCA+AGG | - | chr1_1:44852714-44852733 | Msa0023510:intron | 30.0% |
| !! | TTCTGAATTTTCAAGGAAAC+AGG | - | chr1_1:44852721-44852740 | Msa0023510:intron | 30.0% |
| !! | TCTGAATTTTCAAGGAAACA+GGG | - | chr1_1:44852722-44852741 | Msa0023510:intron | 30.0% |
| ATTGTGTCAATAAAGCTAAC+AGG | - | chr1_1:44852750-44852769 | Msa0023510:intron | 30.0% | |
| !!! | TTTTTTAATGAACCGTGAAC+TGG | - | chr1_1:44853172-44853191 | Msa0023510:intron | 30.0% |
| TTGACACTCAGCATTAATTT+GGG | + | chr1_1:44853198-44853217 | None:intergenic | 30.0% | |
| TTTGACACTCAGCATTAATT+TGG | + | chr1_1:44853199-44853218 | None:intergenic | 30.0% | |
| ! | AATGTCATGATTTGGAAAGA+TGG | + | chr1_1:44853549-44853568 | None:intergenic | 30.0% |
| CTTAAAATCTGGTCAAAATG+TGG | - | chr1_1:44853573-44853592 | Msa0023510:intron | 30.0% | |
| ATCTTAACAAGTTTACAAGG+AGG | + | chr1_1:44853623-44853642 | None:intergenic | 30.0% | |
| CAGATTTAGAAAACTTTGCT+TGG | + | chr1_1:44853760-44853779 | None:intergenic | 30.0% | |
| AACTTACTAACCAAATCGTT+TGG | + | chr1_1:44853880-44853899 | None:intergenic | 30.0% | |
| !! | AACGATTTGGTTAGTAAGTT+TGG | - | chr1_1:44853880-44853899 | Msa0023510:CDS | 30.0% |
| !! | ACGATTTGGTTAGTAAGTTT+GGG | - | chr1_1:44853881-44853900 | Msa0023510:CDS | 30.0% |
| !!! | ATCTCTTTCAATATTTTGGC+AGG | - | chr1_1:44854105-44854124 | Msa0023510:intron | 30.0% |
| AATCTTCTTAATAGGACTCT+AGG | - | chr1_1:44854129-44854148 | Msa0023510:intron | 30.0% | |
| TCTGTTTAGATTGTTTCATC+CGG | + | chr1_1:44854375-44854394 | None:intergenic | 30.0% | |
| ! | GTAGCATGAATACAATTTTC+TGG | + | chr1_1:44854472-44854491 | None:intergenic | 30.0% |
| TATCAACAATGGTTGAAAGA+TGG | + | chr1_1:44854678-44854697 | None:intergenic | 30.0% | |
| ! | AACCATTGTTGATAAGTTGT+GGG | - | chr1_1:44854684-44854703 | Msa0023510:intron | 30.0% |
| TAATGCTGGTAATTCCTATA+TGG | - | chr1_1:44854821-44854840 | Msa0023510:intron | 30.0% | |
| AGAAAAAGGGGTTTAGTATT+TGG | + | chr1_1:44855110-44855129 | None:intergenic | 30.0% | |
| AAACGAAAAGAAGTGAGATA+TGG | + | chr1_1:44855222-44855241 | None:intergenic | 30.0% | |
| GATTGAAAATCAAACTGAAG+TGG | - | chr1_1:44855577-44855596 | Msa0023510:intron | 30.0% | |
| ! | AAGAAGACTCTGAAAAGTAA+AGG | - | chr1_1:44855623-44855642 | Msa0023510:intron | 30.0% |
| ! | AGAAGACTCTGAAAAGTAAA+GGG | - | chr1_1:44855624-44855643 | Msa0023510:intron | 30.0% |
| TGGACACACTATTTATATAC+TGG | - | chr1_1:44855774-44855793 | Msa0023510:five_prime_UTR | 30.0% | |
| CAAAGTAGTCCACAAAGATA+AGG | - | chr1_1:44847411-44847430 | Msa0023510:three_prime_UTR | 35.0% | |
| AGAATCAATTGGGTTACCTT+AGG | + | chr1_1:44847539-44847558 | None:intergenic | 35.0% | |
| GGAGAAATTGGAGAATCAAT+TGG | + | chr1_1:44847550-44847569 | None:intergenic | 35.0% | |
| !!! | TTCCTTCCTTCCTTGTTTTA+GGG | - | chr1_1:44847578-44847597 | Msa0023510:CDS | 35.0% |
| CTAAAACCCTAAAACAAGGA+AGG | + | chr1_1:44847587-44847606 | None:intergenic | 35.0% | |
| ! | AAAGGTGTACATTGTGAAAG+AGG | + | chr1_1:44847678-44847697 | None:intergenic | 35.0% |
| GTGTCTTTGTTCTTTGTATG+GGG | + | chr1_1:44847727-44847746 | None:intergenic | 35.0% | |
| GAGTGTCTTTGTTCTTTGTA+TGG | + | chr1_1:44847729-44847748 | None:intergenic | 35.0% | |
| ! | TTTTTGCAGGTGATGAAGAA+GGG | + | chr1_1:44847822-44847841 | None:intergenic | 35.0% |
| AAATCCGTATGATGCATCTA+AGG | - | chr1_1:44848074-44848093 | Msa0023510:intron | 35.0% | |
| AATCCGTATGATGCATCTAA+GGG | - | chr1_1:44848075-44848094 | Msa0023510:intron | 35.0% | |
| GTGAAACATTGGAATTGGAA+CGG | + | chr1_1:44848178-44848197 | None:intergenic | 35.0% | |
| !! | AATAGGGTTTGTTGGATTTG+AGG | + | chr1_1:44848202-44848221 | None:intergenic | 35.0% |
| GAAATGGAAATAGGGTTTGT+TGG | + | chr1_1:44848210-44848229 | None:intergenic | 35.0% | |
| GAAGAAGGGAAATGGAAATA+GGG | + | chr1_1:44848218-44848237 | None:intergenic | 35.0% | |
| AGAAGAAGGGAAATGGAAAT+AGG | + | chr1_1:44848219-44848238 | None:intergenic | 35.0% | |
| TTTGTCATCATTTGAGGAAG+TGG | + | chr1_1:44848270-44848289 | None:intergenic | 35.0% | |
| ATAGGGTTTGTCATCATTTG+AGG | + | chr1_1:44848276-44848295 | None:intergenic | 35.0% | |
| !! | AAGAATTATTCTGAGACGGA+GGG | + | chr1_1:44848420-44848439 | None:intergenic | 35.0% |
| !! | AAAGAATTATTCTGAGACGG+AGG | + | chr1_1:44848421-44848440 | None:intergenic | 35.0% |
| ! | GGAGTATTATCTAACTTTCG+TGG | - | chr1_1:44848596-44848615 | Msa0023510:intron | 35.0% |
| ! | AATTTTCTCACCGTGTTCAT+CGG | + | chr1_1:44848733-44848752 | None:intergenic | 35.0% |
| AAAAAAAGTAAGGGTGGAAG+TGG | + | chr1_1:44848846-44848865 | None:intergenic | 35.0% | |
| ATTGCTTGACCCTAAATTTG+AGG | - | chr1_1:44849160-44849179 | Msa0023510:intron | 35.0% | |
| ATTTACCGAGCTGATTATGA+GGG | - | chr1_1:44849351-44849370 | Msa0023510:CDS | 35.0% | |
| AAATTCCCTCATAATCAGCT+CGG | + | chr1_1:44849359-44849378 | None:intergenic | 35.0% | |
| TGTCAGCTGTGAAGAATATA+AGG | - | chr1_1:44849383-44849402 | Msa0023510:intron | 35.0% | |
| GTACAAGCTCTTTACTTAGA+AGG | - | chr1_1:44849463-44849482 | Msa0023510:intron | 35.0% | |
| !! | CTTGCTTCTAGAACTTCAAA+TGG | - | chr1_1:44849495-44849514 | Msa0023510:intron | 35.0% |
| !! | AATGTATTGCTATTTGGTGC+AGG | - | chr1_1:44849626-44849645 | Msa0023510:intron | 35.0% |
| GTCAAAATATCAGAAGTCAC+TGG | - | chr1_1:44849737-44849756 | Msa0023510:intron | 35.0% | |
| AAAATATCAGAAGTCACTGG+AGG | - | chr1_1:44849740-44849759 | Msa0023510:intron | 35.0% | |
| AAAGATGGCTGCACAAAATT+TGG | + | chr1_1:44849783-44849802 | None:intergenic | 35.0% | |
| ATTCCTTTACCTCGTGTAAA+CGG | + | chr1_1:44849806-44849825 | None:intergenic | 35.0% | |
| TTACACGAGGTAAAGGAATA+TGG | - | chr1_1:44849807-44849826 | Msa0023510:intron | 35.0% | |
| GAAATGTAACAGACATACAG+AGG | + | chr1_1:44849870-44849889 | None:intergenic | 35.0% | |
| !! | TGTAAGGAGTGTTAATTGAC+TGG | + | chr1_1:44850075-44850094 | None:intergenic | 35.0% |
| !! | ATTTTTATTTGCAACACCCC+TGG | - | chr1_1:44850148-44850167 | Msa0023510:intron | 35.0% |
| ACATATATTGGGTGTAGAAG+AGG | - | chr1_1:44850254-44850273 | Msa0023510:intron | 35.0% | |
| CATATATTGGGTGTAGAAGA+GGG | - | chr1_1:44850255-44850274 | Msa0023510:intron | 35.0% | |
| TAAAACAAACACACGGACAA+GGG | + | chr1_1:44850330-44850349 | None:intergenic | 35.0% | |
| ATAAAACAAACACACGGACA+AGG | + | chr1_1:44850331-44850350 | None:intergenic | 35.0% | |
| TCATGAAATACCTATCTCAC+AGG | + | chr1_1:44850538-44850557 | None:intergenic | 35.0% | |
| CCCATTTGAAAGAGATGATA+TGG | + | chr1_1:44850564-44850583 | None:intergenic | 35.0% | |
| GTATGGTTTGATGCTTTACT+AGG | - | chr1_1:44850810-44850829 | Msa0023510:intron | 35.0% | |
| ! | TTAACATTATCGGTGCTTGA+CGG | - | chr1_1:44850908-44850927 | Msa0023510:intron | 35.0% |
| !!! | GACTATTATTTTGAGACGGA+GGG | + | chr1_1:44851035-44851054 | None:intergenic | 35.0% |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr1_1:44851151-44851170 | Msa0023510:intron | 35.0% | |
| AGACAGGAATAATGCTAAAG+AGG | - | chr1_1:44851259-44851278 | Msa0023510:intron | 35.0% | |
| !! | GCTGTACTCTTAACTTGTTA+AGG | - | chr1_1:44851647-44851666 | Msa0023510:intron | 35.0% |
| CAATCCCAAATACTAGGAAA+AGG | - | chr1_1:44851751-44851770 | Msa0023510:CDS | 35.0% | |
| ! | GATAGCCTTTTCCTAGTATT+TGG | + | chr1_1:44851759-44851778 | None:intergenic | 35.0% |
| GGTCAAAATCTCTTTCTACT+CGG | - | chr1_1:44851789-44851808 | Msa0023510:CDS | 35.0% | |
| TGGTGTGTAATTACTCAAGA+TGG | + | chr1_1:44851821-44851840 | None:intergenic | 35.0% | |
| ATTATATGGCTTCTTCCCTT+AGG | - | chr1_1:44851977-44851996 | Msa0023510:intron | 35.0% | |
| GTAAGTAATAGGACTCCTAA+GGG | + | chr1_1:44851995-44852014 | None:intergenic | 35.0% | |
| TGTAAGTAATAGGACTCCTA+AGG | + | chr1_1:44851996-44852015 | None:intergenic | 35.0% | |
| ATACCTTTGTCAAGAATCCA+TGG | + | chr1_1:44852147-44852166 | None:intergenic | 35.0% | |
| CATCTCTTCTAAGTAAGAGA+TGG | + | chr1_1:44852245-44852264 | None:intergenic | 35.0% | |
| !!! | TGTTCACAATGGTTTTGGTT+TGG | + | chr1_1:44852388-44852407 | None:intergenic | 35.0% |
| ! | TGTACTGTTCACAATGGTTT+TGG | + | chr1_1:44852393-44852412 | None:intergenic | 35.0% |
| TGTGTGATTGAAAACTGAAG+TGG | + | chr1_1:44852437-44852456 | None:intergenic | 35.0% | |
| ! | ACTTCAGTTTTCAATCACAC+AGG | - | chr1_1:44852436-44852455 | Msa0023510:CDS | 35.0% |
| TCAATGCTTCTTTGTTGCAT+TGG | - | chr1_1:44852867-44852886 | Msa0023510:intron | 35.0% | |
| !!! | TCTCCTCTTTTTTGATAGCT+AGG | - | chr1_1:44853252-44853271 | Msa0023510:intron | 35.0% |
| GTTCAATAACATTGAGGTGA+TGG | - | chr1_1:44853340-44853359 | Msa0023510:intron | 35.0% | |
| AATCTGGTCAAAATGTGGTT+AGG | - | chr1_1:44853578-44853597 | Msa0023510:intron | 35.0% | |
| ATGTTAGGATGGTATGAAGA+TGG | - | chr1_1:44853828-44853847 | Msa0023510:CDS | 35.0% | |
| TGTTAGGATGGTATGAAGAT+GGG | - | chr1_1:44853829-44853848 | Msa0023510:CDS | 35.0% | |
| ! | GCTCAAAGTACCAATTGTAT+TGG | + | chr1_1:44854007-44854026 | None:intergenic | 35.0% |
| TGTTACAAGCAATGAAAGCA+AGG | + | chr1_1:44854029-44854048 | None:intergenic | 35.0% | |
| TGGCAGGAAATCTTCTTAAT+AGG | - | chr1_1:44854121-44854140 | Msa0023510:intron | 35.0% | |
| TGCAGAAGGAAATGCATTTA+AGG | - | chr1_1:44854203-44854222 | Msa0023510:intron | 35.0% | |
| TAACCTCAAACTGTTGCAAA+AGG | + | chr1_1:44854306-44854325 | None:intergenic | 35.0% | |
| TGCAAACTGTTCCTTCTATT+TGG | - | chr1_1:44854326-44854345 | Msa0023510:intron | 35.0% | |
| TAAACACAGGACCAAATAGA+AGG | + | chr1_1:44854340-44854359 | None:intergenic | 35.0% | |
| ! | TGAATACAATTTTCTGGGCA+GGG | + | chr1_1:44854466-44854485 | None:intergenic | 35.0% |
| ! | ATGAATACAATTTTCTGGGC+AGG | + | chr1_1:44854467-44854486 | None:intergenic | 35.0% |
| ! | CAACCATTGTTGATAAGTTG+TGG | - | chr1_1:44854683-44854702 | Msa0023510:intron | 35.0% |
| TTGATCAACCTTTGTGTTAC+AGG | + | chr1_1:44854715-44854734 | None:intergenic | 35.0% | |
| TATGTTCGAGGATAAAACCT+TGG | + | chr1_1:44854904-44854923 | None:intergenic | 35.0% | |
| ! | TCACTTCTTTTCGTTTGTGT+TGG | - | chr1_1:44855226-44855245 | Msa0023510:intron | 35.0% |
| TTCACTTATGATATTGGAGC+AGG | - | chr1_1:44855276-44855295 | Msa0023510:intron | 35.0% | |
| TATATTCTCCAACTCAAGCT+CGG | + | chr1_1:44855361-44855380 | None:intergenic | 35.0% | |
| TGGAGAATATATGCTCAACT+TGG | - | chr1_1:44855370-44855389 | Msa0023510:intron | 35.0% | |
| ATTGTAGAGAGATACCAAGT+GGG | - | chr1_1:44855502-44855521 | Msa0023510:intron | 35.0% | |
| ! | TTTTCAATCCTAGCAAAGAC+TGG | + | chr1_1:44855566-44855585 | None:intergenic | 35.0% |
| AAACTGAAGTGGAAGACAAA+GGG | - | chr1_1:44855588-44855607 | Msa0023510:intron | 35.0% | |
| AAACAAGCTCAAGAAGTTGT+TGG | - | chr1_1:44855653-44855672 | Msa0023510:intron | 35.0% | |
| GCATTATGCATGTGTATGTA+TGG | - | chr1_1:44855827-44855846 | Msa0023510:five_prime_UTR | 35.0% | |
| !! | CTTTTTGGGAATAAAGTTCG+TGG | - | chr1_1:44855879-44855898 | Msa0023510:five_prime_UTR | 35.0% |
| !! | AATGAAGTACTGCATCTTGC+CGG | + | chr1_1:44847363-44847382 | None:intergenic | 40.0% |
| ! | TCTTTGTGGACTACTTTGCT+GGG | + | chr1_1:44847409-44847428 | None:intergenic | 40.0% |
| ! | ATCTTTGTGGACTACTTTGC+TGG | + | chr1_1:44847410-44847429 | None:intergenic | 40.0% |
| !! | GAGAAAGTGCCTTATCTTTG+TGG | + | chr1_1:44847423-44847442 | None:intergenic | 40.0% |
| TGAGAAAGTGAGAAGGTTCT+GGG | + | chr1_1:44847495-44847514 | None:intergenic | 40.0% | |
| CAATTGGGTTACCTTAGGTT+AGG | + | chr1_1:44847534-44847553 | None:intergenic | 40.0% | |
| GGAAGGAAGAAAGGAGAAAT+TGG | + | chr1_1:44847562-44847581 | None:intergenic | 40.0% | |
| CTAAAACAAGGAAGGAAGGA+AGG | + | chr1_1:44847579-44847598 | None:intergenic | 40.0% | |
| !!! | CTTCCTTCCTTCCTTGTTTT+AGG | - | chr1_1:44847577-44847596 | Msa0023510:CDS | 40.0% |
| AACCCTAAAACAAGGAAGGA+AGG | + | chr1_1:44847583-44847602 | None:intergenic | 40.0% | |
| ! | GTTTTTGCAGGTGATGAAGA+AGG | + | chr1_1:44847823-44847842 | None:intergenic | 40.0% |
| ! | AAACCCCAGAGTGCTTAAAA+TGG | - | chr1_1:44848103-44848122 | Msa0023510:intron | 40.0% |
| !!! | ACTGCCATTTTAAGCACTCT+GGG | + | chr1_1:44848110-44848129 | None:intergenic | 40.0% |
| ATTGGAACGGAGTGAAAGAA+TGG | + | chr1_1:44848165-44848184 | None:intergenic | 40.0% | |
| GAGGTGTGAAACATTGGAAT+TGG | + | chr1_1:44848183-44848202 | None:intergenic | 40.0% | |
| ! | GGATTTGAGGTGTGAAACAT+TGG | + | chr1_1:44848189-44848208 | None:intergenic | 40.0% |
| !! | CTAACTTTCGTGGGTTAGTT+TGG | - | chr1_1:44848606-44848625 | Msa0023510:intron | 40.0% |
| ! | TGTAATTTGACAGCGGCTTT+TGG | - | chr1_1:44848680-44848699 | Msa0023510:intron | 40.0% |
| ! | GTAATTTGACAGCGGCTTTT+GGG | - | chr1_1:44848681-44848700 | Msa0023510:intron | 40.0% |
| CTTGTGAAATGAGATTGCAG+TGG | + | chr1_1:44848794-44848813 | None:intergenic | 40.0% | |
| ACGGACATTGTTCACGTTAA+GGG | + | chr1_1:44848950-44848969 | None:intergenic | 40.0% | |
| CATTTACCGAGCTGATTATG+AGG | - | chr1_1:44849350-44849369 | Msa0023510:CDS | 40.0% | |
| TTTCCCATCATCAGATTGAG+AGG | + | chr1_1:44849559-44849578 | None:intergenic | 40.0% | |
| TTGAAACACAAGGCTTAAGG+TGG | + | chr1_1:44849689-44849708 | None:intergenic | 40.0% | |
| ! | ACCTTAAGCCTTGTGTTTCA+AGG | - | chr1_1:44849688-44849707 | Msa0023510:intron | 40.0% |
| TCCTTGAAACACAAGGCTTA+AGG | + | chr1_1:44849692-44849711 | None:intergenic | 40.0% | |
| TCCTCTTTCCTTGAAACACA+AGG | + | chr1_1:44849699-44849718 | None:intergenic | 40.0% | |
| TTTCCGTTTACACGAGGTAA+AGG | - | chr1_1:44849800-44849819 | Msa0023510:intron | 40.0% | |
| TCACTAGAGACTGTTCACAA+TGG | - | chr1_1:44849947-44849966 | Msa0023510:intron | 40.0% | |
| AAAACAAACACACGGACAAG+GGG | + | chr1_1:44850329-44850348 | None:intergenic | 40.0% | |
| !! | TAATTTTGGGGAAGCATGCA+GGG | + | chr1_1:44850488-44850507 | None:intergenic | 40.0% |
| GTTCAAACCTGGATCAAAAG+TGG | - | chr1_1:44850708-44850727 | Msa0023510:intron | 40.0% | |
| ! | ATAGTCTGAGTCTTGTCACT+CGG | + | chr1_1:44850786-44850805 | None:intergenic | 40.0% |
| !!! | CGACTATTATTTTGAGACGG+AGG | + | chr1_1:44851036-44851055 | None:intergenic | 40.0% |
| ! | TTAGTAAATCAGGTTGCTCC+TGG | + | chr1_1:44851413-44851432 | None:intergenic | 40.0% |
| TACACTGCACTTGATTGGTA+AGG | - | chr1_1:44851458-44851477 | Msa0023510:intron | 40.0% | |
| ! | TACGTTTCCATGCCGTTTAT+TGG | - | chr1_1:44852071-44852090 | Msa0023510:intron | 40.0% |
| TAGCATAGCTGGCCAATAAA+CGG | + | chr1_1:44852086-44852105 | None:intergenic | 40.0% | |
| AGCCTTCCCAAAATGGTATA+TGG | - | chr1_1:44852121-44852140 | Msa0023510:intron | 40.0% | |
| ! | CCATGGCCATATACCATTTT+GGG | + | chr1_1:44852130-44852149 | None:intergenic | 40.0% |
| ! | TCCATGGCCATATACCATTT+TGG | + | chr1_1:44852131-44852150 | None:intergenic | 40.0% |
| GATCAGTGTACTGTTCACAA+TGG | + | chr1_1:44852399-44852418 | None:intergenic | 40.0% | |
| TCAATCACGTACTCATTGCT+AGG | + | chr1_1:44852927-44852946 | None:intergenic | 40.0% | |
| GAGCTTGAAATATGGTGAGT+CGG | + | chr1_1:44853003-44853022 | None:intergenic | 40.0% | |
| CAGGAGAAGAGCTTGAAATA+TGG | + | chr1_1:44853011-44853030 | None:intergenic | 40.0% | |
| ! | CGAACTGAACTTTGAGAAGT+TGG | - | chr1_1:44853046-44853065 | Msa0023510:intron | 40.0% |
| ! | ACTGAACTTTGAGAAGTTGG+TGG | - | chr1_1:44853049-44853068 | Msa0023510:intron | 40.0% |
| AAACTGCAAAAGAGCCAAAC+TGG | + | chr1_1:44853123-44853142 | None:intergenic | 40.0% | |
| !!! | AGTTTGGCTCTTTTGCAGTT+TGG | - | chr1_1:44853122-44853141 | Msa0023510:intron | 40.0% |
| ! | CATTAATTTGGGCCAGTTCA+CGG | + | chr1_1:44853187-44853206 | None:intergenic | 40.0% |
| TGTCAAATCTGAGCAAAGCA+AGG | - | chr1_1:44853212-44853231 | Msa0023510:intron | 40.0% | |
| GTCAAATCTGAGCAAAGCAA+GGG | - | chr1_1:44853213-44853232 | Msa0023510:intron | 40.0% | |
| TGGCCTAGCTATCAAAAAAG+AGG | + | chr1_1:44853258-44853277 | None:intergenic | 40.0% | |
| TGGTCAAAATGTGGTTAGGA+TGG | - | chr1_1:44853582-44853601 | Msa0023510:intron | 40.0% | |
| GGTCAAAATGTGGTTAGGAT+GGG | - | chr1_1:44853583-44853602 | Msa0023510:intron | 40.0% | |
| GTCAAAATGTGGTTAGGATG+GGG | - | chr1_1:44853584-44853603 | Msa0023510:intron | 40.0% | |
| TCAAAATGTGGTTAGGATGG+GGG | - | chr1_1:44853585-44853604 | Msa0023510:intron | 40.0% | |
| ! | TTAGGATGGGGGTATATGAT+TGG | - | chr1_1:44853596-44853615 | Msa0023510:intron | 40.0% |
| TACGCTTGAACCAAACGATT+TGG | - | chr1_1:44853867-44853886 | Msa0023510:CDS | 40.0% | |
| TAGATACTTCTTCCTCAGAG+AGG | - | chr1_1:44853915-44853934 | Msa0023510:CDS | 40.0% | |
| AGGTGGAATTTGGCAATGAT+GGG | - | chr1_1:44853935-44853954 | Msa0023510:CDS | 40.0% | |
| GCACATCTTGCCAATACAAT+TGG | - | chr1_1:44853994-44854013 | Msa0023510:intron | 40.0% | |
| AAAGAACTGCCAATCAACAC+TGG | - | chr1_1:44854161-44854180 | Msa0023510:intron | 40.0% | |
| !! | AATTCACTGCCAGTGTTGAT+TGG | + | chr1_1:44854173-44854192 | None:intergenic | 40.0% |
| CATTTAAGGACAATGTAGCG+AGG | - | chr1_1:44854217-44854236 | Msa0023510:intron | 40.0% | |
| ! | ATGCCTTTTGCAACAGTTTG+AGG | - | chr1_1:44854300-44854319 | Msa0023510:intron | 40.0% |
| GTTTAGATTGTTTCATCCGG+CGG | + | chr1_1:44854372-44854391 | None:intergenic | 40.0% | |
| CTCCCACAACTTATCAACAA+TGG | + | chr1_1:44854689-44854708 | None:intergenic | 40.0% | |
| TTGCTTAAAGAGAGACCAAG+GGG | + | chr1_1:44854856-44854875 | None:intergenic | 40.0% | |
| CTTGCTTAAAGAGAGACCAA+GGG | + | chr1_1:44854857-44854876 | None:intergenic | 40.0% | |
| AGTAACAGGAGATAGTGCAA+TGG | + | chr1_1:44855338-44855357 | None:intergenic | 40.0% | |
| AAAGATAGAGAGAGATACCC+AGG | + | chr1_1:44855425-44855444 | None:intergenic | 40.0% | |
| CATTGTAGAGAGATACCAAG+TGG | - | chr1_1:44855501-44855520 | Msa0023510:intron | 40.0% | |
| TTGTAGAGAGATACCAAGTG+GGG | - | chr1_1:44855503-44855522 | Msa0023510:intron | 40.0% | |
| CAAACTGAAGTGGAAGACAA+AGG | - | chr1_1:44855587-44855606 | Msa0023510:intron | 40.0% | |
| AACTGAAGTGGAAGACAAAG+GGG | - | chr1_1:44855589-44855608 | Msa0023510:intron | 40.0% | |
| TGCGAAGAACTTCAAGCACT+TGG | + | chr1_1:44847333-44847352 | None:intergenic | 45.0% | |
| AAGTTCTTCGCAAAGCTCAC+CGG | - | chr1_1:44847341-44847360 | Msa0023510:three_prime_UTR | 45.0% | |
| TGGGCTCCTTAATCTAGTCT+AGG | + | chr1_1:44847390-44847409 | None:intergenic | 45.0% | |
| GAGAAAGTGAGAAGGTTCTG+GGG | + | chr1_1:44847494-44847513 | None:intergenic | 45.0% | |
| GTGAGAAAGTGAGAAGGTTC+TGG | + | chr1_1:44847496-44847515 | None:intergenic | 45.0% | |
| GAGTGAGTGAGAAAGTGAGA+AGG | + | chr1_1:44847502-44847521 | None:intergenic | 45.0% | |
| AGGAAGGAAGGAAGGAAGAA+AGG | + | chr1_1:44847571-44847590 | None:intergenic | 45.0% | |
| CTGCCCTTAGATGCATCATA+CGG | + | chr1_1:44848081-44848100 | None:intergenic | 45.0% | |
| !!! | CTGCCATTTTAAGCACTCTG+GGG | + | chr1_1:44848109-44848128 | None:intergenic | 45.0% |
| !!! | CACTGCCATTTTAAGCACTC+TGG | + | chr1_1:44848111-44848130 | None:intergenic | 45.0% |
| CTCTTGGAGAAGAAGGGAAA+TGG | + | chr1_1:44848226-44848245 | None:intergenic | 45.0% | |
| AAGCTGCTCTTGGAGAAGAA+GGG | + | chr1_1:44848232-44848251 | None:intergenic | 45.0% | |
| AAAGCTGCTCTTGGAGAAGA+AGG | + | chr1_1:44848233-44848252 | None:intergenic | 45.0% | |
| TTGCAGAAGAAAGCTGCTCT+TGG | + | chr1_1:44848242-44848261 | None:intergenic | 45.0% | |
| AGAGGGGTTGTGATGACATA+GGG | + | chr1_1:44848293-44848312 | None:intergenic | 45.0% | |
| AAGAGGGGTTGTGATGACAT+AGG | + | chr1_1:44848294-44848313 | None:intergenic | 45.0% | |
| !! | AGCGTTGACGTAGTAAAGAG+GGG | + | chr1_1:44848309-44848328 | None:intergenic | 45.0% |
| !! | GAGCGTTGACGTAGTAAAGA+GGG | + | chr1_1:44848310-44848329 | None:intergenic | 45.0% |
| GAATAAGCGCTACCCATATG+GGG | + | chr1_1:44848335-44848354 | None:intergenic | 45.0% | |
| GGAATAAGCGCTACCCATAT+GGG | + | chr1_1:44848336-44848355 | None:intergenic | 45.0% | |
| TGGAATAAGCGCTACCCATA+TGG | + | chr1_1:44848337-44848356 | None:intergenic | 45.0% | |
| !! | ATTACTGGCACCGATGAACA+CGG | - | chr1_1:44848720-44848739 | Msa0023510:intron | 45.0% |
| TGAGATTGCAGTGGTCAGTA+GGG | + | chr1_1:44848785-44848804 | None:intergenic | 45.0% | |
| ATGAGATTGCAGTGGTCAGT+AGG | + | chr1_1:44848786-44848805 | None:intergenic | 45.0% | |
| CACAAGCTTACAAGACGCTT+TGG | - | chr1_1:44848808-44848827 | Msa0023510:intron | 45.0% | |
| GACGGACATTGTTCACGTTA+AGG | + | chr1_1:44848951-44848970 | None:intergenic | 45.0% | |
| CAAGCATGAAGCAGTTGTGA+AGG | - | chr1_1:44849296-44849315 | Msa0023510:CDS | 45.0% | |
| !! | TATTCGAGAGTGCTTGCCAA+CGG | - | chr1_1:44849324-44849343 | Msa0023510:CDS | 45.0% |
| ACTGCCTCTCAATCTGATGA+TGG | - | chr1_1:44849552-44849571 | Msa0023510:intron | 45.0% | |
| CTGCCTCTCAATCTGATGAT+GGG | - | chr1_1:44849553-44849572 | Msa0023510:intron | 45.0% | |
| !! | CTATTTGGTGCAGGATGAGA+AGG | - | chr1_1:44849635-44849654 | Msa0023510:intron | 45.0% |
| ACACAAGGCTTAAGGTGGAT+CGG | + | chr1_1:44849684-44849703 | None:intergenic | 45.0% | |
| GCCTTGTGTTTCAAGGAAAG+AGG | - | chr1_1:44849695-44849714 | Msa0023510:intron | 45.0% | |
| ACCTCGTGTAAACGGAAAGA+TGG | + | chr1_1:44849798-44849817 | None:intergenic | 45.0% | |
| AGTCATGTCATCTCATGCCA+GGG | + | chr1_1:44850168-44850187 | None:intergenic | 45.0% | |
| TAGTCATGTCATCTCATGCC+AGG | + | chr1_1:44850169-44850188 | None:intergenic | 45.0% | |
| !! | AATTTTGGGGAAGCATGCAG+GGG | + | chr1_1:44850487-44850506 | None:intergenic | 45.0% |
| !! | CTAATTTTGGGGAAGCATGC+AGG | + | chr1_1:44850489-44850508 | None:intergenic | 45.0% |
| GCATGCTTCCCCAAAATTAG+TGG | - | chr1_1:44850489-44850508 | Msa0023510:intron | 45.0% | |
| AGCAGTTTCACCTGTGAGAT+AGG | - | chr1_1:44850525-44850544 | Msa0023510:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1_1:44850646-44850665 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1_1:44850647-44850666 | None:intergenic | 45.0% |
| ! | CTTTTCCATTTCCCGAGCAT+CGG | - | chr1_1:44850740-44850759 | Msa0023510:intron | 45.0% |
| AAAGAGCCAGGGAAAGTAAG+AGG | + | chr1_1:44850868-44850887 | None:intergenic | 45.0% | |
| !!! | AGGCTACTGTTTTGAGACAG+AGG | - | chr1_1:44851279-44851298 | Msa0023510:intron | 45.0% |
| !!! | GGCTACTGTTTTGAGACAGA+GGG | - | chr1_1:44851280-44851299 | Msa0023510:intron | 45.0% |
| CAGCTATGCTAATGTCTGCT+GGG | - | chr1_1:44852095-44852114 | Msa0023510:intron | 45.0% | |
| !! | GGCCATATACCATTTTGGGA+AGG | + | chr1_1:44852126-44852145 | None:intergenic | 45.0% |
| CCCAAAATGGTATATGGCCA+TGG | - | chr1_1:44852127-44852146 | Msa0023510:intron | 45.0% | |
| TGGCCATGGATTCTTGACAA+AGG | - | chr1_1:44852141-44852160 | Msa0023510:intron | 45.0% | |
| CAGTTCACTGAACCATGAAC+AGG | + | chr1_1:44852274-44852293 | None:intergenic | 45.0% | |
| GAAGTGGTGATTGAGCAGTT+CGG | + | chr1_1:44852421-44852440 | None:intergenic | 45.0% | |
| ! | TCTTTGTTGCATTGGCCACT+TGG | - | chr1_1:44852875-44852894 | Msa0023510:intron | 45.0% |
| CACTTGGACTGACATGCTTT+CGG | - | chr1_1:44852891-44852910 | Msa0023510:intron | 45.0% | |
| ! | CTGACATGCTTTCGGACTTT+TGG | - | chr1_1:44852899-44852918 | Msa0023510:intron | 45.0% |
| TTCAAGCTCTTCTCCTGAAC+TGG | - | chr1_1:44853014-44853033 | Msa0023510:intron | 45.0% | |
| TCAAGCTCTTCTCCTGAACT+GGG | - | chr1_1:44853015-44853034 | Msa0023510:intron | 45.0% | |
| !! | TTCGCTTTAGAACCCAGTTC+AGG | + | chr1_1:44853030-44853049 | None:intergenic | 45.0% |
| ACTGAACTGCTTCACCAGTT+TGG | - | chr1_1:44853106-44853125 | Msa0023510:intron | 45.0% | |
| GTTTGGATCAGTGCAGTTCA+TGG | - | chr1_1:44853139-44853158 | Msa0023510:intron | 45.0% | |
| GATCAGTGCAGTTCATGGTT+CGG | - | chr1_1:44853144-44853163 | Msa0023510:intron | 45.0% | |
| ATGAAGATGGGCAAGTCACT+AGG | - | chr1_1:44853841-44853860 | Msa0023510:CDS | 45.0% | |
| ATACTTCTTCCTCAGAGAGG+TGG | - | chr1_1:44853918-44853937 | Msa0023510:CDS | 45.0% | |
| TTCCTCAGAGAGGTGGAATT+TGG | - | chr1_1:44853925-44853944 | Msa0023510:CDS | 45.0% | |
| GAGGTGGAATTTGGCAATGA+TGG | - | chr1_1:44853934-44853953 | Msa0023510:CDS | 45.0% | |
| GGTGGAATTTGGCAATGATG+GGG | - | chr1_1:44853936-44853955 | Msa0023510:CDS | 45.0% | |
| ! | CAATGATGGGGACTATTCAG+AGG | - | chr1_1:44853948-44853967 | Msa0023510:intron | 45.0% |
| ACTGGCAGTGAATTCCACTA+CGG | - | chr1_1:44854179-44854198 | Msa0023510:intron | 45.0% | |
| !! | GTTCTGGAGATTGGTAATGC+TGG | - | chr1_1:44854807-44854826 | Msa0023510:intron | 45.0% |
| CCTTGCTTAAAGAGAGACCA+AGG | + | chr1_1:44854858-44854877 | None:intergenic | 45.0% | |
| CCTTGGTCTCTCTTTAAGCA+AGG | - | chr1_1:44854855-44854874 | Msa0023510:CDS | 45.0% | |
| TGGTCTCTCTTTAAGCAAGG+AGG | - | chr1_1:44854858-44854877 | Msa0023510:CDS | 45.0% | |
| ATGCTCAACTTGGCTATTCC+AGG | - | chr1_1:44855380-44855399 | Msa0023510:intron | 45.0% | |
| TGCTCAACTTGGCTATTCCA+GGG | - | chr1_1:44855381-44855400 | Msa0023510:intron | 45.0% | |
| ACCAATTTGATGCAGCAACC+TGG | - | chr1_1:44855404-44855423 | Msa0023510:intron | 45.0% | |
| CCAATTTGATGCAGCAACCT+GGG | - | chr1_1:44855405-44855424 | Msa0023510:intron | 45.0% | |
| AACCTCAACCAGTCTTTGCT+AGG | - | chr1_1:44855555-44855574 | Msa0023510:intron | 45.0% | |
| ! | ATCCTAGCAAAGACTGGTTG+AGG | + | chr1_1:44855560-44855579 | None:intergenic | 45.0% |
| CTTCAAGCACTTGGTAAGCC+TGG | + | chr1_1:44847324-44847343 | None:intergenic | 50.0% | |
| ACTTTCTCACTCACTCTCGC+TGG | - | chr1_1:44847506-44847525 | Msa0023510:three_prime_UTR | 50.0% | |
| TCTCGCTGGAACCTAACCTA+AGG | - | chr1_1:44847520-44847539 | Msa0023510:exon | 50.0% | |
| !! | GGAGCGTTGACGTAGTAAAG+AGG | + | chr1_1:44848311-44848330 | None:intergenic | 50.0% |
| AGGTACCTGAAAGCGAGCAA+TGG | + | chr1_1:44848375-44848394 | None:intergenic | 50.0% | |
| GAGACGGAGGGACAAATTTG+TGG | + | chr1_1:44848408-44848427 | None:intergenic | 50.0% | |
| GAGATTGCAGTGGTCAGTAG+GGG | + | chr1_1:44848784-44848803 | None:intergenic | 50.0% | |
| AGCTCGGTAAATGTCACCGT+TGG | + | chr1_1:44849343-44849362 | None:intergenic | 50.0% | |
| GCCATCTTTCCGTTTACACG+AGG | - | chr1_1:44849794-44849813 | Msa0023510:intron | 50.0% | |
| GTCATGTCATCTCATGCCAG+GGG | + | chr1_1:44850167-44850186 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1_1:44850642-44850661 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1_1:44850648-44850667 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1_1:44850645-44850664 | Msa0023510:intron | 50.0% | |
| ATCAACCGATGCTCGGGAAA+TGG | + | chr1_1:44850748-44850767 | None:intergenic | 50.0% | |
| !! | TTTCCCGAGCATCGGTTGAT+TGG | - | chr1_1:44850748-44850767 | Msa0023510:intron | 50.0% |
| !! | TTCCCGAGCATCGGTTGATT+GGG | - | chr1_1:44850749-44850768 | Msa0023510:intron | 50.0% |
| ! | TGAGTCTTGTCACTCGGAAC+AGG | + | chr1_1:44850780-44850799 | None:intergenic | 50.0% |
| AGTGCTCCTCTTACTTTCCC+TGG | - | chr1_1:44850859-44850878 | Msa0023510:intron | 50.0% | |
| GGTGCTTGACGGAAATACGT+TGG | - | chr1_1:44850919-44850938 | Msa0023510:intron | 50.0% | |
| ATCAGCACTAGCTGATGACC+AGG | - | chr1_1:44851392-44851411 | Msa0023510:intron | 50.0% | |
| CCAATCAAGTGCAGTGTAGC+TGG | + | chr1_1:44851456-44851475 | None:intergenic | 50.0% | |
| CCAGCTACACTGCACTTGAT+TGG | - | chr1_1:44851453-44851472 | Msa0023510:intron | 50.0% | |
| TAGCTGGCCAATAAACGGCA+TGG | + | chr1_1:44852081-44852100 | None:intergenic | 50.0% | |
| CCAGCAGACATTAGCATAGC+TGG | + | chr1_1:44852097-44852116 | None:intergenic | 50.0% | |
| CCAGCTATGCTAATGTCTGC+TGG | - | chr1_1:44852094-44852113 | Msa0023510:intron | 50.0% | |
| TGGGCTAAGCCTTCCCAAAA+TGG | - | chr1_1:44852114-44852133 | Msa0023510:intron | 50.0% | |
| !! | GAGATGCTGACTCCTGTTCA+TGG | - | chr1_1:44852259-44852278 | Msa0023510:intron | 50.0% |
| AGTTCACCGCAAAACTGCAG+CGG | + | chr1_1:44852348-44852367 | None:intergenic | 50.0% | |
| ! | GCAGTTTTGCGGTGAACTGT+TGG | - | chr1_1:44852350-44852369 | Msa0023510:intron | 50.0% |
| ! | CGAAAGCATGTCAGTCCAAG+TGG | + | chr1_1:44852893-44852912 | None:intergenic | 50.0% |
| TATGGTGAGTCGGTGACCAA+TGG | + | chr1_1:44852993-44853012 | None:intergenic | 50.0% | |
| TGCCAAATTCCACCTCTCTG+AGG | + | chr1_1:44853930-44853949 | None:intergenic | 50.0% | |
| AATTCCACTACGGCTGCAGA+AGG | - | chr1_1:44854189-44854208 | Msa0023510:intron | 50.0% | |
| ATTTCCTTCTGCAGCCGTAG+TGG | + | chr1_1:44854196-44854215 | None:intergenic | 50.0% | |
| TAAGGACAATGTAGCGAGGC+TGG | - | chr1_1:44854221-44854240 | Msa0023510:intron | 50.0% | |
| GCGGCAGGTGAATTAAACAC+AGG | + | chr1_1:44854353-44854372 | None:intergenic | 50.0% | |
| GTGTTTAATTCACCTGCCGC+CGG | - | chr1_1:44854353-44854372 | Msa0023510:intron | 50.0% | |
| AGCCTCACAAGCTGATGTCA+GGG | + | chr1_1:44854787-44854806 | None:intergenic | 50.0% | |
| ATCAGCTTGTGAGGCTGTTC+TGG | - | chr1_1:44854791-44854810 | Msa0023510:intron | 50.0% | |
| !! | TGTGAGGCTGTTCTGGAGAT+TGG | - | chr1_1:44854798-44854817 | Msa0023510:intron | 50.0% |
| CAACTCAAGCTCGGAGTAAC+AGG | + | chr1_1:44855352-44855371 | None:intergenic | 50.0% | |
| CTGTTACTCCGAGCTTGAGT+TGG | - | chr1_1:44855350-44855369 | Msa0023510:intron | 50.0% | |
| TGCTGCATCAAATTGGTCCC+TGG | + | chr1_1:44855401-44855420 | None:intergenic | 50.0% | |
| CCCAGGTTGCTGCATCAAAT+TGG | + | chr1_1:44855408-44855427 | None:intergenic | 50.0% | |
| TAGAGAGATACCAAGTGGGG+TGG | - | chr1_1:44855506-44855525 | Msa0023510:intron | 50.0% | |
| ! | TACCAAGTGGGGTGGACTTA+AGG | - | chr1_1:44855514-44855533 | Msa0023510:intron | 50.0% |
| ! | ACCAAGTGGGGTGGACTTAA+GGG | - | chr1_1:44855515-44855534 | Msa0023510:intron | 50.0% |
| ACTTAAGGGTGGTCAGGTCA+TGG | - | chr1_1:44855529-44855548 | Msa0023510:intron | 50.0% | |
| GAAGACAAAGGGGTTGCAGT+TGG | - | chr1_1:44855599-44855618 | Msa0023510:intron | 50.0% | |
| GGAGAGTGAGTTCAGCGATG+AGG | + | chr1_1:44847473-44847492 | None:intergenic | 55.0% | |
| GTCAACGCTCCTCCCCATAT+GGG | - | chr1_1:44848320-44848339 | Msa0023510:CDS | 55.0% | |
| TAAGCGCTACCCATATGGGG+AGG | + | chr1_1:44848332-44848351 | None:intergenic | 55.0% | |
| CTGAAAGCGAGCAATGGCGT+CGG | + | chr1_1:44848369-44848388 | None:intergenic | 55.0% | |
| ATTGCAGTGGTCAGTAGGGG+TGG | + | chr1_1:44848781-44848800 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr1_1:44850634-44850653 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1_1:44850633-44850652 | Msa0023510:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1_1:44850634-44850653 | Msa0023510:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1_1:44850640-44850659 | Msa0023510:intron | 55.0% | |
| CCTGGATCAAAAGTGGCCTG+CGG | - | chr1_1:44850715-44850734 | Msa0023510:intron | 55.0% | |
| CTGGATCAAAAGTGGCCTGC+GGG | - | chr1_1:44850716-44850735 | Msa0023510:intron | 55.0% | |
| GGGAAATGGAAAAGTCCCGC+AGG | + | chr1_1:44850734-44850753 | None:intergenic | 55.0% | |
| !! | TCCCGAGCATCGGTTGATTG+GGG | - | chr1_1:44850750-44850769 | Msa0023510:intron | 55.0% |
| TGCCCCAATCAACCGATGCT+CGG | + | chr1_1:44850755-44850774 | None:intergenic | 55.0% | |
| AGATTGTTTCATCCGGCGGC+AGG | + | chr1_1:44854368-44854387 | None:intergenic | 55.0% | |
| GGGAGCTGCCTGTAACACAA+AGG | - | chr1_1:44854704-44854723 | Msa0023510:intron | 55.0% | |
| CTCCCTGACATCAGCTTGTG+AGG | - | chr1_1:44854782-44854801 | Msa0023510:intron | 55.0% | |
| CAGCCTCACAAGCTGATGTC+AGG | + | chr1_1:44854788-44854807 | None:intergenic | 55.0% | |
| !! | TGCTTCTGAAGCAGCTGCCA+AGG | - | chr1_1:44854884-44854903 | Msa0023510:CDS | 55.0% |
| ACCCTTAAGTCCACCCCACT+TGG | + | chr1_1:44855519-44855538 | None:intergenic | 55.0% | |
| ! | AAGTGGGGTGGACTTAAGGG+TGG | - | chr1_1:44855518-44855537 | Msa0023510:intron | 55.0% |
| CGTCAACGCTCCTCCCCATA+TGG | - | chr1_1:44848319-44848338 | Msa0023510:CDS | 60.0% | |
| ! | AAAGCGAGCAATGGCGTCGG+CGG | + | chr1_1:44848366-44848385 | None:intergenic | 60.0% |
| CGACGCCATTGCTCGCTTTC+AGG | - | chr1_1:44848367-44848386 | Msa0023510:CDS | 60.0% | |
| TGCAACTGCTGCCACTGCTC+AGG | - | chr1_1:44848752-44848771 | Msa0023510:intron | 60.0% | |
| GCAACTGCTGCCACTGCTCA+GGG | - | chr1_1:44848753-44848772 | Msa0023510:intron | 60.0% | |
| ! | TGGGGAAGCATGCAGGGGTA+GGG | + | chr1_1:44850482-44850501 | None:intergenic | 60.0% |
| ! | TTGGGGAAGCATGCAGGGGT+AGG | + | chr1_1:44850483-44850502 | None:intergenic | 60.0% |
| !!! | CCGCAGGCCACTTTTGATCC+AGG | + | chr1_1:44850718-44850737 | None:intergenic | 60.0% |
| GCCCCAATCAACCGATGCTC+GGG | + | chr1_1:44850754-44850773 | None:intergenic | 60.0% | |
| ! | ACCACGCCGCTGCAGTTTTG+CGG | - | chr1_1:44852339-44852358 | Msa0023510:intron | 60.0% |
| ! | AGGGGCACGCTCGTCCATAT+AGG | + | chr1_1:44854838-44854857 | None:intergenic | 60.0% |
| ATATGGACGAGCGTGCCCCT+TGG | - | chr1_1:44854838-44854857 | Msa0023510:CDS | 60.0% | |
| ! | GGGTGGACTTAAGGGTGGTC+AGG | - | chr1_1:44855523-44855542 | Msa0023510:intron | 60.0% |
| AGGGGTGGAACCCTGAGCAG+TGG | + | chr1_1:44848766-44848785 | None:intergenic | 65.0% | |
| ACCGCAAAACTGCAGCGGCG+TGG | + | chr1_1:44852343-44852362 | None:intergenic | 65.0% | |
| !! | AATGGCGTCGGCGGCGATGG+TGG | + | chr1_1:44848357-44848376 | None:intergenic | 70.0% |
| !! | AGCAATGGCGTCGGCGGCGA+TGG | + | chr1_1:44848360-44848379 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 44847303 | 44855908 | 44847303 | ID=Msa0023510;Name=Msa0023510 |
| chr1_1 | mRNA | 44847303 | 44855908 | 44847303 | ID=Msa0023510-mRNA-1;Parent=Msa0023510;Name=Msa0023510-mRNA-1;_AED=0.26;_eAED=0.26;_QI=260|1|1|1|0.84|0.71|14|193|600 |
| chr1_1 | exon | 44847303 | 44847369 | 44847303 | ID=Msa0023510-mRNA-1:exon:12903;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44847403 | 44847702 | 44847403 | ID=Msa0023510-mRNA-1:exon:12902;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44847785 | 44847913 | 44847785 | ID=Msa0023510-mRNA-1:exon:12901;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44848306 | 44848461 | 44848306 | ID=Msa0023510-mRNA-1:exon:12900;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44848969 | 44849084 | 44848969 | ID=Msa0023510-mRNA-1:exon:12899;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44849196 | 44849376 | 44849196 | ID=Msa0023510-mRNA-1:exon:12898;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44851049 | 44851147 | 44851049 | ID=Msa0023510-mRNA-1:exon:12897;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44851732 | 44851825 | 44851732 | ID=Msa0023510-mRNA-1:exon:12896;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44852379 | 44852503 | 44852379 | ID=Msa0023510-mRNA-1:exon:12895;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44853396 | 44853563 | 44853396 | ID=Msa0023510-mRNA-1:exon:12894;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44853807 | 44853956 | 44853807 | ID=Msa0023510-mRNA-1:exon:12893;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44854375 | 44854518 | 44854375 | ID=Msa0023510-mRNA-1:exon:12892;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44854823 | 44855110 | 44854823 | ID=Msa0023510-mRNA-1:exon:12891;Parent=Msa0023510-mRNA-1 |
| chr1_1 | exon | 44855670 | 44855908 | 44855670 | ID=Msa0023510-mRNA-1:exon:12890;Parent=Msa0023510-mRNA-1 |
| chr1_1 | five_prime_UTR | 44855670 | 44855908 | 44855670 | ID=Msa0023510-mRNA-1:five_prime_utr;Parent=Msa0023510-mRNA-1 |
| chr1_1 | five_prime_UTR | 44855090 | 44855110 | 44855090 | ID=Msa0023510-mRNA-1:five_prime_utr;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44854823 | 44855089 | 44854823 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44854375 | 44854518 | 44854375 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44853807 | 44853956 | 44853807 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44853396 | 44853563 | 44853396 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44852379 | 44852503 | 44852379 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44851732 | 44851825 | 44851732 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44851049 | 44851147 | 44851049 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44849196 | 44849376 | 44849196 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44848969 | 44849084 | 44848969 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44848306 | 44848461 | 44848306 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44847785 | 44847913 | 44847785 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | CDS | 44847529 | 44847702 | 44847529 | ID=Msa0023510-mRNA-1:cds;Parent=Msa0023510-mRNA-1 |
| chr1_1 | three_prime_UTR | 44847403 | 44847528 | 44847403 | ID=Msa0023510-mRNA-1:three_prime_utr;Parent=Msa0023510-mRNA-1 |
| chr1_1 | three_prime_UTR | 44847303 | 44847369 | 44847303 | ID=Msa0023510-mRNA-1:three_prime_utr;Parent=Msa0023510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
