Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067790 | XP_013470428.1 | 97.260 | 511 | 14 | 0 | 31 | 541 | 90 | 600 | 0.0 | 1040 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067790 | sp|Q9M2T9|SYMM_ARATH | 77.996 | 509 | 110 | 1 | 25 | 531 | 97 | 605 | 0.0 | 838 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067790 | A0A072VS17 | 97.260 | 511 | 14 | 0 | 31 | 541 | 90 | 600 | 0.0 | 1040 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023510 | Msa0067790 | 0.832190 | 1.088863e-55 | -8.615850e-47 |
| Msa0067790 | Msa0677840 | 0.826461 | 2.679212e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067790 | MtrunA17_Chr1g0212481 | 97.260 | 511 | 14 | 0 | 31 | 541 | 90 | 600 | 0.0 | 1040 |
| Msa0067790 | MtrunA17_Chr1g0152521 | 77.612 | 268 | 11 | 1 | 23 | 290 | 90 | 308 | 4.17e-145 | 420 |
| Msa0067790 | MtrunA17_Chr1g0152511 | 79.518 | 249 | 4 | 2 | 293 | 541 | 1 | 202 | 3.76e-132 | 382 |
| Msa0067790 | MtrunA17_Chr4g0039621 | 25.953 | 551 | 322 | 21 | 31 | 515 | 51 | 581 | 3.07e-39 | 152 |
| Msa0067790 | MtrunA17_Chr4g0068571 | 25.058 | 431 | 259 | 15 | 118 | 508 | 37 | 443 | 5.00e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067790 | AT3G55400.1 | 77.996 | 509 | 110 | 1 | 25 | 531 | 97 | 605 | 0.0 | 838 |
| Msa0067790 | AT3G55400.2 | 80.430 | 419 | 82 | 0 | 25 | 443 | 97 | 515 | 0.0 | 724 |
| Msa0067790 | AT4G13780.1 | 25.185 | 540 | 326 | 18 | 31 | 510 | 52 | 573 | 3.35e-39 | 153 |
Find 149 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATGGCCATATACCATTT+TGG | 0.158244 | 1_2:-33100128 | None:intergenic |
| AAAGATGGCTGCACAAAATT+TGG | 0.164014 | 1_2:-33097790 | None:intergenic |
| AACGATTTGGTTAGTAAGTT+TGG | 0.200559 | 1_2:+33101880 | Msa0067790:CDS |
| TTCCTCAGAGAGGTGGAATT+TGG | 0.232008 | 1_2:+33101925 | Msa0067790:CDS |
| TGGCAGGAAATCTTCTTAAT+AGG | 0.253659 | 1_2:+33102121 | Msa0067790:intron |
| TGTAATTTGACAGCGGCTTT+TGG | 0.274056 | 1_2:+33096690 | Msa0067790:intron |
| TACGTTTCCATGCCGTTTAT+TGG | 0.277442 | 1_2:+33100071 | Msa0067790:CDS |
| TGGACACACTATTTATATAC+TGG | 0.281972 | 1_2:+33103772 | Msa0067790:three_prime_UTR |
| TGCAGAAGGAAATGCATTTA+AGG | 0.298760 | 1_2:+33102203 | Msa0067790:CDS |
| TTCCCGAGCATCGGTTGATT+GGG | 0.300431 | 1_2:+33098759 | Msa0067790:CDS |
| GTATGGTTTGATGCTTTACT+AGG | 0.314469 | 1_2:+33098820 | Msa0067790:CDS |
| GAAACAGTGTTTAGTAAATC+AGG | 0.320253 | 1_2:-33099430 | None:intergenic |
| TACGCTTGAACCAAACGATT+TGG | 0.323345 | 1_2:+33101867 | Msa0067790:CDS |
| ATCAGCTTGTGAGGCTGTTC+TGG | 0.327249 | 1_2:+33102791 | Msa0067790:CDS |
| CAACTCAAGCTCGGAGTAAC+AGG | 0.327281 | 1_2:-33103349 | None:intergenic |
| TTTCCCGAGCATCGGTTGAT+TGG | 0.328655 | 1_2:+33098758 | Msa0067790:CDS |
| TACCAAGTGGGGTGGACTTA+AGG | 0.328656 | 1_2:+33103512 | Msa0067790:CDS |
| AAGAAAGTTATATTCATTAC+TGG | 0.336572 | 1_2:+33096715 | Msa0067790:CDS |
| TGGGCTAAGCCTTCCCAAAA+TGG | 0.344820 | 1_2:+33100114 | Msa0067790:CDS |
| AACAAAATTAATTCAGAATA+GGG | 0.347104 | 1_2:-33103689 | None:intergenic |
| ATGCTCAACTTGGCTATTCC+AGG | 0.350933 | 1_2:+33103380 | Msa0067790:CDS |
| ATCAACCGATGCTCGGGAAA+TGG | 0.352674 | 1_2:-33098755 | None:intergenic |
| CCAGCTATGCTAATGTCTGC+TGG | 0.359184 | 1_2:+33100094 | Msa0067790:CDS |
| ACCTTAAGCCTTGTGTTTCA+AGG | 0.361855 | 1_2:+33097698 | Msa0067790:CDS |
| ACGATTTGGTTAGTAAGTTT+GGG | 0.362204 | 1_2:+33101881 | Msa0067790:CDS |
| TCCTTGAAACACAAGGCTTA+AGG | 0.367680 | 1_2:-33097699 | None:intergenic |
| TAATGCTGGTAATTCCTATA+TGG | 0.374295 | 1_2:+33102821 | Msa0067790:CDS |
| AGCCTTCCCAAAATGGTATA+TGG | 0.378595 | 1_2:+33100121 | Msa0067790:CDS |
| CCCAGGTTGCTGCATCAAAT+TGG | 0.382507 | 1_2:-33103405 | None:intergenic |
| ACGCTTATTCCACATGTTGA+TGG | 0.384528 | 1_2:-33096228 | None:intergenic |
| CCAGCTACACTGCACTTGAT+TGG | 0.385424 | 1_2:+33099463 | Msa0067790:CDS |
| TGCAACTGCTGCCACTGCTC+AGG | 0.387654 | 1_2:+33096762 | Msa0067790:CDS |
| ACCAAGTGGGGTGGACTTAA+GGG | 0.391465 | 1_2:+33103513 | Msa0067790:CDS |
| AAACAAAATTAATTCAGAAT+AGG | 0.397376 | 1_2:-33103690 | None:intergenic |
| CACAAGCTTACAAGACGCTT+TGG | 0.398442 | 1_2:+33096818 | Msa0067790:CDS |
| GAGGTGGAATTTGGCAATGA+TGG | 0.400433 | 1_2:+33101934 | Msa0067790:CDS |
| AACTTACTAACCAAATCGTT+TGG | 0.404070 | 1_2:-33101877 | None:intergenic |
| TGTGAGGCTGTTCTGGAGAT+TGG | 0.410328 | 1_2:+33102798 | Msa0067790:CDS |
| CAGCCTCACAAGCTGATGTC+AGG | 0.412097 | 1_2:-33102785 | None:intergenic |
| CCAATCAAGTGCAGTGTAGC+TGG | 0.425417 | 1_2:-33099463 | None:intergenic |
| TGTCAGCTGTGAAGAATATA+AGG | 0.426210 | 1_2:+33097393 | Msa0067790:CDS |
| CATTTACCGAGCTGATTATG+AGG | 0.426407 | 1_2:+33097360 | Msa0067790:CDS |
| ATTCCTTTACCTCGTGTAAA+CGG | 0.431671 | 1_2:-33097813 | None:intergenic |
| GCACATCTTGCCAATACAAT+TGG | 0.438695 | 1_2:+33101994 | Msa0067790:CDS |
| ACCAATTTGATGCAGCAACC+TGG | 0.442225 | 1_2:+33103404 | Msa0067790:CDS |
| GCTCAAAGTACCAATTGTAT+TGG | 0.446015 | 1_2:-33102004 | None:intergenic |
| GCATTATGCATGTGTATGTA+TGG | 0.450630 | 1_2:+33103825 | Msa0067790:intron |
| TGCTACATGATTGTAAAGAA+TGG | 0.452196 | 1_2:-33096169 | None:intergenic |
| TGAGTCTTGTCACTCGGAAC+AGG | 0.454916 | 1_2:-33098787 | None:intergenic |
| AATTCACTGCCAGTGTTGAT+TGG | 0.457459 | 1_2:-33102170 | None:intergenic |
| AAACAAGCTCAAGAAGTTGT+TGG | 0.459841 | 1_2:+33103651 | Msa0067790:CDS |
| GCCCCAATCAACCGATGCTC+GGG | 0.461201 | 1_2:-33098761 | None:intergenic |
| TAAACACTGTTTCTTCAAGT+TGG | 0.465611 | 1_2:+33099440 | Msa0067790:CDS |
| AAACTGAAGTGGAAGACAAA+GGG | 0.469002 | 1_2:+33103586 | Msa0067790:CDS |
| AAGAAGACTCTGAAAAGTAA+AGG | 0.472328 | 1_2:+33103621 | Msa0067790:CDS |
| AGGGGCACGCTCGTCCATAT+AGG | 0.472951 | 1_2:-33102835 | None:intergenic |
| TAGCATAGCTGGCCAATAAA+CGG | 0.473012 | 1_2:-33100083 | None:intergenic |
| CCAGCAGACATTAGCATAGC+TGG | 0.474341 | 1_2:-33100094 | None:intergenic |
| AGAAGACTCTGAAAAGTAAA+GGG | 0.482397 | 1_2:+33103622 | Msa0067790:CDS |
| GCCTTGTGTTTCAAGGAAAG+AGG | 0.485059 | 1_2:+33097705 | Msa0067790:CDS |
| ATGTTAGGATGGTATGAAGA+TGG | 0.485616 | 1_2:+33101828 | Msa0067790:intron |
| AGGTGGAATTTGGCAATGAT+GGG | 0.485834 | 1_2:+33101935 | Msa0067790:CDS |
| CTCCCTGACATCAGCTTGTG+AGG | 0.486304 | 1_2:+33102782 | Msa0067790:CDS |
| TTAGTAAATCAGGTTGCTCC+TGG | 0.489812 | 1_2:-33099420 | None:intergenic |
| GGGTGGACTTAAGGGTGGTC+AGG | 0.492564 | 1_2:+33103521 | Msa0067790:CDS |
| TGCCCCAATCAACCGATGCT+CGG | 0.495001 | 1_2:-33098762 | None:intergenic |
| CTGTTACTCCGAGCTTGAGT+TGG | 0.496703 | 1_2:+33103350 | Msa0067790:CDS |
| TGTTAGGATGGTATGAAGAT+GGG | 0.497162 | 1_2:+33101829 | Msa0067790:intron |
| CTGGATCAAAAGTGGCCTGC+GGG | 0.499199 | 1_2:+33098726 | Msa0067790:CDS |
| ACCCTTAAGTCCACCCCACT+TGG | 0.509023 | 1_2:-33103514 | None:intergenic |
| GCAACTGCTGCCACTGCTCA+GGG | 0.510604 | 1_2:+33096763 | Msa0067790:CDS |
| ATGAGATTGCAGTGGTCAGT+AGG | 0.514173 | 1_2:-33096793 | None:intergenic |
| TAAGGACAATGTAGCGAGGC+TGG | 0.515013 | 1_2:+33102221 | Msa0067790:CDS |
| AGACTCAGACTATATATGTA+TGG | 0.517740 | 1_2:+33098803 | Msa0067790:CDS |
| ACTTAAGGGTGGTCAGGTCA+TGG | 0.517933 | 1_2:+33103527 | Msa0067790:CDS |
| TGCTTCTGAAGCAGCTGCCA+AGG | 0.518475 | 1_2:+33102884 | Msa0067790:CDS |
| CTATTTGGTGCAGGATGAGA+AGG | 0.519918 | 1_2:+33097645 | Msa0067790:intron |
| TATGGTTTGATGCTTTACTA+GGG | 0.525816 | 1_2:+33098821 | Msa0067790:CDS |
| TGAGATTGCAGTGGTCAGTA+GGG | 0.526148 | 1_2:-33096792 | None:intergenic |
| AATCTTCTTAATAGGACTCT+AGG | 0.528211 | 1_2:+33102129 | Msa0067790:CDS |
| ATCCTAGCAAAGACTGGTTG+AGG | 0.529078 | 1_2:-33103555 | None:intergenic |
| CCTTGGTCTCTCTTTAAGCA+AGG | 0.530338 | 1_2:+33102855 | Msa0067790:CDS |
| CAGCTATGCTAATGTCTGCT+GGG | 0.530697 | 1_2:+33100095 | Msa0067790:CDS |
| TGCTGCATCAAATTGGTCCC+TGG | 0.531484 | 1_2:-33103398 | None:intergenic |
| GTTCTGGAGATTGGTAATGC+TGG | 0.538081 | 1_2:+33102807 | Msa0067790:CDS |
| CCCAAAATGGTATATGGCCA+TGG | 0.540455 | 1_2:+33100127 | Msa0067790:CDS |
| TCCCGAGCATCGGTTGATTG+GGG | 0.545821 | 1_2:+33098760 | Msa0067790:CDS |
| CCAATTTGATGCAGCAACCT+GGG | 0.549013 | 1_2:+33103405 | Msa0067790:CDS |
| GTCAAAATATCAGAAGTCAC+TGG | 0.550500 | 1_2:+33097747 | Msa0067790:CDS |
| ATGAAGATGGGCAAGTCACT+AGG | 0.550900 | 1_2:+33101841 | Msa0067790:CDS |
| ATATGGACGAGCGTGCCCCT+TGG | 0.551543 | 1_2:+33102838 | Msa0067790:CDS |
| CTGTCTCTAATATAATTACA+AGG | 0.560785 | 1_2:-33103300 | None:intergenic |
| ACCTCGTGTAAACGGAAAGA+TGG | 0.565307 | 1_2:-33097805 | None:intergenic |
| AACCTCAACCAGTCTTTGCT+AGG | 0.566335 | 1_2:+33103553 | Msa0067790:CDS |
| TATATTCTCCAACTCAAGCT+CGG | 0.567513 | 1_2:-33103358 | None:intergenic |
| ATCAGCACTAGCTGATGACC+AGG | 0.568431 | 1_2:+33099402 | Msa0067790:CDS |
| ATACTTCTTCCTCAGAGAGG+TGG | 0.569549 | 1_2:+33101918 | Msa0067790:CDS |
| ATACCTTTGTCAAGAATCCA+TGG | 0.573946 | 1_2:-33100144 | None:intergenic |
| GATTGAAAATCAAACTGAAG+TGG | 0.574353 | 1_2:+33103575 | Msa0067790:CDS |
| TCCTCTTTCCTTGAAACACA+AGG | 0.575285 | 1_2:-33097706 | None:intergenic |
| TAAATTTCTAGGTTCAAACC+TGG | 0.577775 | 1_2:+33098707 | Msa0067790:intron |
| GTTCAAACCTGGATCAAAAG+TGG | 0.577799 | 1_2:+33098718 | Msa0067790:CDS |
| TTGAAACACAAGGCTTAAGG+TGG | 0.578255 | 1_2:-33097696 | None:intergenic |
| TACACTGCACTTGATTGGTA+AGG | 0.579282 | 1_2:+33099468 | Msa0067790:CDS |
| TGCTCAACTTGGCTATTCCA+GGG | 0.580797 | 1_2:+33103381 | Msa0067790:CDS |
| ATTGCAGTGGTCAGTAGGGG+TGG | 0.588624 | 1_2:-33096788 | None:intergenic |
| TATTCGAGAGTGCTTGCCAA+CGG | 0.591306 | 1_2:+33097334 | Msa0067790:CDS |
| AATTCCACTACGGCTGCAGA+AGG | 0.591965 | 1_2:+33102189 | Msa0067790:CDS |
| GAAGACAAAGGGGTTGCAGT+TGG | 0.593044 | 1_2:+33103597 | Msa0067790:CDS |
| AGCCTCACAAGCTGATGTCA+GGG | 0.594895 | 1_2:-33102784 | None:intergenic |
| TGGAGAATATATGCTCAACT+TGG | 0.596758 | 1_2:+33103370 | Msa0067790:CDS |
| TAGCTGGCCAATAAACGGCA+TGG | 0.600474 | 1_2:-33100078 | None:intergenic |
| AGCTCGGTAAATGTCACCGT+TGG | 0.600769 | 1_2:-33097350 | None:intergenic |
| ACACAAGGCTTAAGGTGGAT+CGG | 0.602973 | 1_2:-33097691 | None:intergenic |
| CAAACTGAAGTGGAAGACAA+AGG | 0.603151 | 1_2:+33103585 | Msa0067790:CDS |
| ATTTACCGAGCTGATTATGA+GGG | 0.603837 | 1_2:+33097361 | Msa0067790:CDS |
| CCTTGCTTAAAGAGAGACCA+AGG | 0.604022 | 1_2:-33102855 | None:intergenic |
| AAAGAACTGCCAATCAACAC+TGG | 0.604833 | 1_2:+33102161 | Msa0067790:CDS |
| CAAGCATGAAGCAGTTGTGA+AGG | 0.607264 | 1_2:+33097306 | Msa0067790:CDS |
| AAATTCCCTCATAATCAGCT+CGG | 0.616005 | 1_2:-33097366 | None:intergenic |
| GGGAAATGGAAAAGTCCCGC+AGG | 0.620262 | 1_2:-33098741 | None:intergenic |
| AGGGGTGGAACCCTGAGCAG+TGG | 0.628300 | 1_2:-33096773 | None:intergenic |
| ATTTCCTTCTGCAGCCGTAG+TGG | 0.632038 | 1_2:-33102193 | None:intergenic |
| GCCATCTTTCCGTTTACACG+AGG | 0.638336 | 1_2:+33097804 | Msa0067790:CDS |
| TAGAGAGATACCAAGTGGGG+TGG | 0.641306 | 1_2:+33103504 | Msa0067790:intron |
| AACTGAAGTGGAAGACAAAG+GGG | 0.642983 | 1_2:+33103587 | Msa0067790:CDS |
| GGAAAATCTCCATCAACATG+TGG | 0.643675 | 1_2:+33096219 | Msa0067790:CDS |
| ATTACTGGCACCGATGAACA+CGG | 0.647036 | 1_2:+33096730 | Msa0067790:CDS |
| ATAGTCTGAGTCTTGTCACT+CGG | 0.651357 | 1_2:-33098793 | None:intergenic |
| CAATGATGGGGACTATTCAG+AGG | 0.651752 | 1_2:+33101948 | Msa0067790:CDS |
| ACTGGCAGTGAATTCCACTA+CGG | 0.653538 | 1_2:+33102179 | Msa0067790:CDS |
| GAGATTGCAGTGGTCAGTAG+GGG | 0.659757 | 1_2:-33096791 | None:intergenic |
| TGCCAAATTCCACCTCTCTG+AGG | 0.662782 | 1_2:-33101927 | None:intergenic |
| ATTGTAGAGAGATACCAAGT+GGG | 0.663995 | 1_2:+33103500 | Msa0067790:intron |
| CCTGGATCAAAAGTGGCCTG+CGG | 0.665415 | 1_2:+33098725 | Msa0067790:CDS |
| TGGTCTCTCTTTAAGCAAGG+AGG | 0.665745 | 1_2:+33102858 | Msa0067790:CDS |
| CATTGTAGAGAGATACCAAG+TGG | 0.666340 | 1_2:+33103499 | Msa0067790:intron |
| CTTGCTTAAAGAGAGACCAA+GGG | 0.666502 | 1_2:-33102854 | None:intergenic |
| TAGATACTTCTTCCTCAGAG+AGG | 0.671329 | 1_2:+33101915 | Msa0067790:CDS |
| GGTGGAATTTGGCAATGATG+GGG | 0.671855 | 1_2:+33101936 | Msa0067790:CDS |
| TGGCCATGGATTCTTGACAA+AGG | 0.674126 | 1_2:+33100141 | Msa0067790:CDS |
| AAAATATCAGAAGTCACTGG+AGG | 0.677971 | 1_2:+33097750 | Msa0067790:CDS |
| GAGACTCTTAGATCAGCTAG+AGG | 0.685099 | 1_2:+33096198 | Msa0067790:CDS |
| AGTAACAGGAGATAGTGCAA+TGG | 0.702926 | 1_2:-33103335 | None:intergenic |
| TTGTAGAGAGATACCAAGTG+GGG | 0.703831 | 1_2:+33103501 | Msa0067790:intron |
| CATTTAAGGACAATGTAGCG+AGG | 0.708225 | 1_2:+33102217 | Msa0067790:CDS |
| TTGCTTAAAGAGAGACCAAG+GGG | 0.714060 | 1_2:-33102853 | None:intergenic |
| AAGTGGGGTGGACTTAAGGG+TGG | 0.722735 | 1_2:+33103516 | Msa0067790:CDS |
| CTTGTGAAATGAGATTGCAG+TGG | 0.809288 | 1_2:-33096801 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTGAATAATTAAAATTT+CGG | - | chr1_2:33097197-33097216 | None:intergenic | 10.0% |
| !!! | CTATAAGTTTATATTTTATA+AGG | + | chr1_2:33098196-33098215 | Msa0067790:intron | 10.0% |
| !! | TAATTTCTATATAAATTTCT+AGG | + | chr1_2:33098696-33098715 | Msa0067790:intron | 10.0% |
| !! | AAAAAATGTATGTTAAAAAT+AGG | - | chr1_2:33099593-33099612 | None:intergenic | 10.0% |
| !! | AATCAATTACTAATATTATA+TGG | + | chr1_2:33099963-33099982 | Msa0067790:intron | 10.0% |
| !! | ATAAACATAAGATAATAAAT+AGG | - | chr1_2:33100181-33100200 | None:intergenic | 10.0% |
| !!! | CTAGTTTTTTTTTTTAAAAA+AGG | - | chr1_2:33100837-33100856 | None:intergenic | 10.0% |
| !! | TATAATAATAGTACTTATAT+TGG | + | chr1_2:33101384-33101403 | Msa0067790:intron | 10.0% |
| !!! | TTTTTTATTTTGAAAATGTT+AGG | + | chr1_2:33101813-33101832 | Msa0067790:intron | 10.0% |
| !!! | ATAACTATTTCATTTTTATT+AGG | - | chr1_2:33102514-33102533 | None:intergenic | 10.0% |
| !! | AATAATGTTACAAATATTAT+TGG | - | chr1_2:33103023-33103042 | None:intergenic | 10.0% |
| !! | TAAAAGTTATTATCTAACTT+TGG | + | chr1_2:33096649-33096668 | Msa0067790:intron | 15.0% |
| !! | ATCATTATAGTCATTTATTA+AGG | + | chr1_2:33096891-33096910 | Msa0067790:intron | 15.0% |
| !!! | TAATGTTTTAATTGAATAGT+CGG | - | chr1_2:33097054-33097073 | None:intergenic | 15.0% |
| !!! | TAGAATATTCTTATTCTTTT+AGG | - | chr1_2:33098118-33098137 | None:intergenic | 15.0% |
| !! | AAAAAGAAATACAAATACAA+AGG | + | chr1_2:33098438-33098457 | Msa0067790:intron | 15.0% |
| !!! | TTTATTTTGCTTTAACATTA+TGG | + | chr1_2:33098607-33098626 | Msa0067790:intron | 15.0% |
| !!! | AATATTTAAAGGTATAATAG+TGG | + | chr1_2:33099193-33099212 | Msa0067790:intron | 15.0% |
| !! | CAATGATTTATAACTATAAA+GGG | - | chr1_2:33099878-33099897 | None:intergenic | 15.0% |
| !! | ATAAATCCAAATTCAATAAA+TGG | - | chr1_2:33100595-33100614 | None:intergenic | 15.0% |
| !!! | ATTTAATTTGATCAAATATC+AGG | - | chr1_2:33103087-33103106 | None:intergenic | 15.0% |
| !! | ATAAGTGAAAATTCTTTATT+AGG | - | chr1_2:33103265-33103284 | None:intergenic | 15.0% |
| !! | AACAAAATTAATTCAGAATA+GGG | - | chr1_2:33103692-33103711 | None:intergenic | 15.0% |
| !! | AAACAAAATTAATTCAGAAT+AGG | - | chr1_2:33103693-33103712 | None:intergenic | 15.0% |
| !!! | AATTTCGATATTTTTCTTTT+TGG | + | chr1_2:33103862-33103881 | Msa0067790:three_prime_UTR | 15.0% |
| !!! | ATTTCGATATTTTTCTTTTT+GGG | + | chr1_2:33103863-33103882 | Msa0067790:three_prime_UTR | 15.0% |
| !!! | TAAAAAGAATTATTCTGAGA+CGG | - | chr1_2:33096434-33096453 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTCAA+TGG | - | chr1_2:33096532-33096551 | None:intergenic | 20.0% |
| !! | TTCTAAATAATAGTCGTTTA+AGG | - | chr1_2:33096580-33096599 | None:intergenic | 20.0% |
| !! | AAGAAAGTTATATTCATTAC+TGG | + | chr1_2:33096715-33096734 | Msa0067790:CDS | 20.0% |
| !! | CTACTTGAAAAAAAAAGTAA+GGG | - | chr1_2:33096865-33096884 | None:intergenic | 20.0% |
| !! | ACTACTTGAAAAAAAAAGTA+AGG | - | chr1_2:33096866-33096885 | None:intergenic | 20.0% |
| !! | TTGAAAAATGACTAAATTGA+CGG | - | chr1_2:33096979-33096998 | None:intergenic | 20.0% |
| !! | GACTATTCAATTAAAACATT+AGG | + | chr1_2:33097053-33097072 | Msa0067790:intron | 20.0% |
| !!! | TGATGCATTTTTAGTAAATA+TGG | + | chr1_2:33097081-33097100 | Msa0067790:intron | 20.0% |
| !! | TCTAATTACAATCCTTTAAT+AGG | + | chr1_2:33097529-33097548 | Msa0067790:intron | 20.0% |
| !! | ATTTCTCATATAATTTAAGC+TGG | + | chr1_2:33097895-33097914 | Msa0067790:intron | 20.0% |
| !!! | TTTTCATTAAAGTGATTCTT+TGG | + | chr1_2:33098236-33098255 | Msa0067790:intron | 20.0% |
| !! | AAGTTAGAGTTAATCAATTT+GGG | - | chr1_2:33098307-33098326 | None:intergenic | 20.0% |
| !! | AAAGTTAGAGTTAATCAATT+TGG | - | chr1_2:33098308-33098327 | None:intergenic | 20.0% |
| !! | AGATTAATAAAACAAACACA+CGG | - | chr1_2:33098347-33098366 | None:intergenic | 20.0% |
| !! | TTAAGTGATTAAATTCAGAT+GGG | - | chr1_2:33098411-33098430 | None:intergenic | 20.0% |
| !! | ATTAAGTGATTAAATTCAGA+TGG | - | chr1_2:33098412-33098431 | None:intergenic | 20.0% |
| !! | GAATTTAATCACTTAATGTA+AGG | + | chr1_2:33098415-33098434 | Msa0067790:intron | 20.0% |
| !!! | AAATACAAAGGTGTTTTATT+TGG | + | chr1_2:33098450-33098469 | Msa0067790:intron | 20.0% |
| !! | ATTATGCACAATTATTTGTA+TGG | + | chr1_2:33098972-33098991 | Msa0067790:intron | 20.0% |
| !! | GGATCAAATTCAATATTTAA+AGG | + | chr1_2:33099182-33099201 | Msa0067790:intron | 20.0% |
| !! | AAAAAAATAGGAAAGAAAAG+AGG | - | chr1_2:33099501-33099520 | None:intergenic | 20.0% |
| !! | AGAGAGAGATTTAAAAAAAT+AGG | - | chr1_2:33099513-33099532 | None:intergenic | 20.0% |
| !! | ATATTTCTCACTTAAGAAAA+GGG | - | chr1_2:33099621-33099640 | None:intergenic | 20.0% |
| !! | TATATTTCTCACTTAAGAAA+AGG | - | chr1_2:33099622-33099641 | None:intergenic | 20.0% |
| !! | CAAAACGATAGAAAATAAAA+AGG | - | chr1_2:33099691-33099710 | None:intergenic | 20.0% |
| !! | CCAATGATTTATAACTATAA+AGG | - | chr1_2:33099879-33099898 | None:intergenic | 20.0% |
| !! | CCTTTATAGTTATAAATCAT+TGG | + | chr1_2:33099876-33099895 | Msa0067790:intron | 20.0% |
| !! | CAAGTTCATTATTTCATTAA+TGG | + | chr1_2:33100025-33100044 | Msa0067790:intron | 20.0% |
| !! | TTATCTTATGTTTATTCTTG+AGG | + | chr1_2:33100186-33100205 | Msa0067790:intron | 20.0% |
| !! | TTCATTCCATTTATTGAATT+TGG | + | chr1_2:33100586-33100605 | Msa0067790:intron | 20.0% |
| !!! | TTTTTTACGATACTATCATT+AGG | - | chr1_2:33100664-33100683 | None:intergenic | 20.0% |
| !! | ATACTTGTATTATTAACCAT+TGG | + | chr1_2:33100974-33100993 | Msa0067790:intron | 20.0% |
| !! | GCATAAGAATGATAAAAAAA+TGG | - | chr1_2:33101278-33101297 | None:intergenic | 20.0% |
| !! | TAAATAGTTCAATAACATTG+AGG | + | chr1_2:33101334-33101353 | Msa0067790:intron | 20.0% |
| !!! | GAAAACTATATAAAGCATTA+AGG | - | chr1_2:33101422-33101441 | None:intergenic | 20.0% |
| !! | ATAATCTTAACAAGTTTACA+AGG | - | chr1_2:33101626-33101645 | None:intergenic | 20.0% |
| !!! | TGTAAACTTGTTAAGATTAT+CGG | + | chr1_2:33101626-33101645 | Msa0067790:intron | 20.0% |
| !! | AGTAATAGTAATTTGATTGT+TGG | + | chr1_2:33101699-33101718 | Msa0067790:intron | 20.0% |
| !!! | TTATTTTGAAAATGTTAGGA+TGG | + | chr1_2:33101817-33101836 | Msa0067790:intron | 20.0% |
| !! | AGATGAAAAGAAGAAAAATA+TGG | + | chr1_2:33102392-33102411 | Msa0067790:intron | 20.0% |
| !! | TATTCAACTTAGATTGTTAT+AGG | + | chr1_2:33102415-33102434 | Msa0067790:intron | 20.0% |
| !!! | TGATCAATATTTACTTTTGT+AGG | + | chr1_2:33102728-33102747 | Msa0067790:intron | 20.0% |
| !! | AACTTCATACAATAAAATGT+TGG | + | chr1_2:33102933-33102952 | Msa0067790:intron | 20.0% |
| !! | ATTATAAAAGATAGATTCAG+TGG | + | chr1_2:33103040-33103059 | Msa0067790:intron | 20.0% |
| !! | TTAATGTGAGAAAAGAAAAA+GGG | - | chr1_2:33103123-33103142 | None:intergenic | 20.0% |
| !! | ATTAATGTGAGAAAAGAAAA+AGG | - | chr1_2:33103124-33103143 | None:intergenic | 20.0% |
| !!! | AGAATTTTCACTTATGATAT+TGG | + | chr1_2:33103270-33103289 | Msa0067790:intron | 20.0% |
| ! | AAATTTGTGGTGAAATGAAT+AGG | - | chr1_2:33096405-33096424 | None:intergenic | 25.0% |
| ! | GGAAAAAAAGTTATAACAGT+GGG | - | chr1_2:33096511-33096530 | None:intergenic | 25.0% |
| ! | TGGAAAAAAAGTTATAACAG+TGG | - | chr1_2:33096512-33096531 | None:intergenic | 25.0% |
| ! | GACTATTATTTAGAAACAGA+GGG | + | chr1_2:33096585-33096604 | Msa0067790:intron | 25.0% |
| !! | ACAGCAATTTTGTAAATTTG+AGG | - | chr1_2:33096932-33096951 | None:intergenic | 25.0% |
| !! | ATTGACTTTCTTTGATGTAT+AGG | + | chr1_2:33097114-33097133 | Msa0067790:intron | 25.0% |
| !! | TACTTTGATAGTTCGTAAAA+TGG | + | chr1_2:33097139-33097158 | Msa0067790:intron | 25.0% |
| ! | GTTATCTATCTTCCTATTAA+AGG | - | chr1_2:33097544-33097563 | None:intergenic | 25.0% |
| !! | TTGAAGAATGTATTGCTATT+TGG | + | chr1_2:33097630-33097649 | Msa0067790:intron | 25.0% |
| !! | TTTAGGATTTGTGTAATGTA+AGG | - | chr1_2:33098101-33098120 | None:intergenic | 25.0% |
| ! | TCTTTGGTCATTACATATAT+TGG | + | chr1_2:33098252-33098271 | Msa0067790:intron | 25.0% |
| ! | CTTTGGTCATTACATATATT+GGG | + | chr1_2:33098253-33098272 | Msa0067790:intron | 25.0% |
| !! | AGCATTATTCCACTAATTTT+GGG | - | chr1_2:33098511-33098530 | None:intergenic | 25.0% |
| !! | AAGCATTATTCCACTAATTT+TGG | - | chr1_2:33098512-33098531 | None:intergenic | 25.0% |
| ! | CAGTTTCTGTTTAACATTAT+CGG | + | chr1_2:33098908-33098927 | Msa0067790:intron | 25.0% |
| !!! | AAACGACTATTATTTTGAGA+CGG | - | chr1_2:33099049-33099068 | None:intergenic | 25.0% |
| ! | CTCAAAATAATAGTCGTTTA+AGG | + | chr1_2:33099050-33099069 | Msa0067790:intron | 25.0% |
| ! | CTCTTATTAATTGTAGTTAG+TGG | + | chr1_2:33099147-33099166 | Msa0067790:intron | 25.0% |
| ! | TAATGACAAGTGGATAAAAA+TGG | - | chr1_2:33099717-33099736 | None:intergenic | 25.0% |
| !!! | TTTCACTTTTCAGTTCAATA+TGG | - | chr1_2:33100299-33100318 | None:intergenic | 25.0% |
| ! | TGAACTGAAAAGTGAAAATA+TGG | + | chr1_2:33100302-33100321 | Msa0067790:intron | 25.0% |
| !!! | TTCTCGTTTTATTTTTTTGG+AGG | - | chr1_2:33100519-33100538 | None:intergenic | 25.0% |
| !!! | GCATTCTCGTTTTATTTTTT+TGG | - | chr1_2:33100522-33100541 | None:intergenic | 25.0% |
| ! | CTTGAAAATTCAGAAATCAT+CGG | - | chr1_2:33100716-33100735 | None:intergenic | 25.0% |
| !!! | ATAAAACTTGCTAACACTAT+TGG | - | chr1_2:33101504-33101523 | None:intergenic | 25.0% |
| ! | TAAGAAGTAATGTCATGATT+TGG | - | chr1_2:33101557-33101576 | None:intergenic | 25.0% |
| ! | TGACATTACTTCTTAAAATC+TGG | + | chr1_2:33101562-33101581 | Msa0067790:intron | 25.0% |
| ! | TGAAGACCATAAACTAAATT+TGG | + | chr1_2:33101724-33101743 | Msa0067790:intron | 25.0% |
| ! | GAAGACCATAAACTAAATTT+GGG | + | chr1_2:33101725-33101744 | Msa0067790:intron | 25.0% |
| !! | ATAAGCCCAAATTTAGTTTA+TGG | - | chr1_2:33101733-33101752 | None:intergenic | 25.0% |
| !! | TAGCATGAATACAATTTTCT+GGG | - | chr1_2:33102471-33102490 | None:intergenic | 25.0% |
| !! | CAATTTAGAACACAAACAAA+GGG | - | chr1_2:33102620-33102639 | None:intergenic | 25.0% |
| !! | ACAATTTAGAACACAAACAA+AGG | - | chr1_2:33102621-33102640 | None:intergenic | 25.0% |
| ! | GTTTATGTAATATATGTTCG+AGG | - | chr1_2:33102916-33102935 | None:intergenic | 25.0% |
| ! | AATATCAGGTAAAGATTTAG+TGG | - | chr1_2:33103073-33103092 | None:intergenic | 25.0% |
| ! | TAATGTGAGAAAAGAAAAAG+GGG | - | chr1_2:33103122-33103141 | None:intergenic | 25.0% |
| ! | ATGCTTATTATACTTGGTTA+AGG | - | chr1_2:33103196-33103215 | None:intergenic | 25.0% |
| ! | TGGAATATGCTTATTATACT+TGG | - | chr1_2:33103202-33103221 | None:intergenic | 25.0% |
| ! | CTGTCTCTAATATAATTACA+AGG | - | chr1_2:33103303-33103322 | None:intergenic | 25.0% |
| !!! | TAGTTTTACATTACAGAAGT+TGG | - | chr1_2:33103719-33103738 | None:intergenic | 25.0% |
| !!! | TGCGTACACAATTTTTTTTT+TGG | + | chr1_2:33103752-33103771 | Msa0067790:three_prime_UTR | 25.0% |
| TGCTACATGATTGTAAAGAA+TGG | - | chr1_2:33096172-33096191 | None:intergenic | 30.0% | |
| CGACTATTATTTAGAAACAG+AGG | + | chr1_2:33096584-33096603 | Msa0067790:intron | 30.0% | |
| GAGTATTATCTAACTTTCGT+GGG | + | chr1_2:33096607-33096626 | Msa0067790:intron | 30.0% | |
| CGTTATATGTAATTTGACAG+CGG | + | chr1_2:33096683-33096702 | Msa0067790:intron | 30.0% | |
| CTTGAAAAAAAAAGTAAGGG+TGG | - | chr1_2:33096862-33096881 | None:intergenic | 30.0% | |
| ! | TTTGATAGTTCGTAAAATGG+AGG | + | chr1_2:33097142-33097161 | Msa0067790:intron | 30.0% |
| ! | AAATTTAGGGTCAAGCAATT+TGG | - | chr1_2:33097169-33097188 | None:intergenic | 30.0% |
| AATTTCGGTCCTCAAATTTA+GGG | - | chr1_2:33097182-33097201 | None:intergenic | 30.0% | |
| AAATTTCGGTCCTCAAATTT+AGG | - | chr1_2:33097183-33097202 | None:intergenic | 30.0% | |
| !!! | AAGGTGATAGTTTTAACTTG+AGG | + | chr1_2:33097412-33097431 | Msa0067790:intron | 30.0% |
| TACAAGCTCTTTACTTAGAA+GGG | + | chr1_2:33097474-33097493 | Msa0067790:intron | 30.0% | |
| !! | GAGTTCATTTTTCTCTTATC+TGG | + | chr1_2:33097839-33097858 | Msa0067790:intron | 30.0% |
| ATTCTATGTTTCTCAAGTCT+TGG | + | chr1_2:33098039-33098058 | Msa0067790:intron | 30.0% | |
| ! | TAATCAATTTGGGATGCTAT+TGG | - | chr1_2:33098297-33098316 | None:intergenic | 30.0% |
| ! | GCATTATTCCACTAATTTTG+GGG | - | chr1_2:33098510-33098529 | None:intergenic | 30.0% |
| TCCATATCATCTCTTTCAAA+TGG | + | chr1_2:33098570-33098589 | Msa0067790:intron | 30.0% | |
| CCATATCATCTCTTTCAAAT+GGG | + | chr1_2:33098571-33098590 | Msa0067790:intron | 30.0% | |
| ! | TAAATTTCTAGGTTCAAACC+TGG | + | chr1_2:33098707-33098726 | Msa0067790:intron | 30.0% |
| AGACTCAGACTATATATGTA+TGG | + | chr1_2:33098803-33098822 | Msa0067790:CDS | 30.0% | |
| TATGGTTTGATGCTTTACTA+GGG | + | chr1_2:33098821-33098840 | Msa0067790:CDS | 30.0% | |
| GAAATCTAATAAAAGAGCCA+GGG | - | chr1_2:33098889-33098908 | None:intergenic | 30.0% | |
| TGAAATCTAATAAAAGAGCC+AGG | - | chr1_2:33098890-33098909 | None:intergenic | 30.0% | |
| TATAAAGTATAGCAGAAGTG+TGG | - | chr1_2:33099017-33099036 | None:intergenic | 30.0% | |
| !!! | ATTGACGATTATTTTGAGAC+AGG | + | chr1_2:33099253-33099272 | Msa0067790:intron | 30.0% |
| AGGGAATATCTTTCATCAAT+TGG | + | chr1_2:33099309-33099328 | Msa0067790:intron | 30.0% | |
| TGTTCAACAAGAGTTTAGTA+AGG | - | chr1_2:33099346-33099365 | None:intergenic | 30.0% | |
| AGCTGCACATATAAAAAGAA+AGG | - | chr1_2:33099378-33099397 | None:intergenic | 30.0% | |
| GAAACAGTGTTTAGTAAATC+AGG | - | chr1_2:33099433-33099452 | None:intergenic | 30.0% | |
| ! | TAAACACTGTTTCTTCAAGT+TGG | + | chr1_2:33099440-33099459 | Msa0067790:CDS | 30.0% |
| !! | TCTTAACTTGTTAAGGTAGA+AGG | + | chr1_2:33099654-33099673 | Msa0067790:intron | 30.0% |
| TAAGAGAGAATAATGACAAG+TGG | - | chr1_2:33099727-33099746 | None:intergenic | 30.0% | |
| TATAGTCAATCCCAAATACT+AGG | + | chr1_2:33099745-33099764 | Msa0067790:intron | 30.0% | |
| ! | ATAGCCTTTTCCTAGTATTT+GGG | - | chr1_2:33099758-33099777 | None:intergenic | 30.0% |
| AAAAGGCTATCATACTTGTT+CGG | + | chr1_2:33099768-33099787 | Msa0067790:intron | 30.0% | |
| ! | CACAAAAATACAGATGGATT+TGG | - | chr1_2:33099841-33099860 | None:intergenic | 30.0% |
| !! | ATCCATCTGTATTTTTGTGA+TGG | + | chr1_2:33099842-33099861 | Msa0067790:intron | 30.0% |
| AACCATCACAAAAATACAGA+TGG | - | chr1_2:33099847-33099866 | None:intergenic | 30.0% | |
| GAATGCATTGTGTAAGTAAT+AGG | - | chr1_2:33100006-33100025 | None:intergenic | 30.0% | |
| !!! | TAATGGTTTTGTTACTCTGT+AGG | + | chr1_2:33100042-33100061 | Msa0067790:intron | 30.0% |
| !! | TTGACAAAGGTATTAGTACT+CGG | + | chr1_2:33100154-33100173 | Msa0067790:intron | 30.0% |
| TGTTTATTCTTGAGGTAACT+TGG | + | chr1_2:33100194-33100213 | Msa0067790:intron | 30.0% | |
| TGATATAGCAGAGATTGAAA+TGG | - | chr1_2:33100555-33100574 | None:intergenic | 30.0% | |
| ! | CGATGATTTCTGAATTTTCA+AGG | + | chr1_2:33100714-33100733 | Msa0067790:intron | 30.0% |
| !! | TTCTGAATTTTCAAGGAAAC+AGG | + | chr1_2:33100721-33100740 | Msa0067790:intron | 30.0% |
| !! | TCTGAATTTTCAAGGAAACA+GGG | + | chr1_2:33100722-33100741 | Msa0067790:intron | 30.0% |
| ATTGTGTCAATAAAGCTAAC+AGG | + | chr1_2:33100750-33100769 | Msa0067790:intron | 30.0% | |
| !!! | TTTTTTAATGAACCGTGAAC+TGG | + | chr1_2:33101172-33101191 | Msa0067790:intron | 30.0% |
| TTGACACTCAGCATTAATTT+GGG | - | chr1_2:33101198-33101217 | None:intergenic | 30.0% | |
| TTTGACACTCAGCATTAATT+TGG | - | chr1_2:33101199-33101218 | None:intergenic | 30.0% | |
| ! | AATGTCATGATTTGGAAAGA+TGG | - | chr1_2:33101549-33101568 | None:intergenic | 30.0% |
| CTTAAAATCTGGTCAAAATG+TGG | + | chr1_2:33101573-33101592 | Msa0067790:intron | 30.0% | |
| ATCTTAACAAGTTTACAAGG+AGG | - | chr1_2:33101623-33101642 | None:intergenic | 30.0% | |
| CAGATTTAGAAAACTTTGCT+TGG | - | chr1_2:33101760-33101779 | None:intergenic | 30.0% | |
| AACTTACTAACCAAATCGTT+TGG | - | chr1_2:33101880-33101899 | None:intergenic | 30.0% | |
| !! | AACGATTTGGTTAGTAAGTT+TGG | + | chr1_2:33101880-33101899 | Msa0067790:CDS | 30.0% |
| !! | ACGATTTGGTTAGTAAGTTT+GGG | + | chr1_2:33101881-33101900 | Msa0067790:CDS | 30.0% |
| ! | CGAAATCTCTTTCACTATTT+TGG | + | chr1_2:33102101-33102120 | Msa0067790:intron | 30.0% |
| AATCTTCTTAATAGGACTCT+AGG | + | chr1_2:33102129-33102148 | Msa0067790:CDS | 30.0% | |
| TCTGTTTAGATTGTTTCATC+CGG | - | chr1_2:33102375-33102394 | None:intergenic | 30.0% | |
| ! | GTAGCATGAATACAATTTTC+TGG | - | chr1_2:33102472-33102491 | None:intergenic | 30.0% |
| TATCAACAATGGTTGAAAGA+TGG | - | chr1_2:33102678-33102697 | None:intergenic | 30.0% | |
| ! | AACCATTGTTGATAAGTTGT+GGG | + | chr1_2:33102684-33102703 | Msa0067790:intron | 30.0% |
| TAATGCTGGTAATTCCTATA+TGG | + | chr1_2:33102821-33102840 | Msa0067790:CDS | 30.0% | |
| AGAAAAAGGGGTTTAGTATT+TGG | - | chr1_2:33103110-33103129 | None:intergenic | 30.0% | |
| AAACGAAAAGAAGTGAGATA+TGG | - | chr1_2:33103222-33103241 | None:intergenic | 30.0% | |
| GATTGAAAATCAAACTGAAG+TGG | + | chr1_2:33103575-33103594 | Msa0067790:CDS | 30.0% | |
| ! | AAGAAGACTCTGAAAAGTAA+AGG | + | chr1_2:33103621-33103640 | Msa0067790:CDS | 30.0% |
| ! | AGAAGACTCTGAAAAGTAAA+GGG | + | chr1_2:33103622-33103641 | Msa0067790:CDS | 30.0% |
| TGGACACACTATTTATATAC+TGG | + | chr1_2:33103772-33103791 | Msa0067790:three_prime_UTR | 30.0% | |
| !! | AAGAATTATTCTGAGACGGA+GGG | - | chr1_2:33096430-33096449 | None:intergenic | 35.0% |
| !! | AAAGAATTATTCTGAGACGG+AGG | - | chr1_2:33096431-33096450 | None:intergenic | 35.0% |
| ! | GGAGTATTATCTAACTTTCG+TGG | + | chr1_2:33096606-33096625 | Msa0067790:intron | 35.0% |
| ! | AATTTTCTCACCGTGTTCAT+CGG | - | chr1_2:33096743-33096762 | None:intergenic | 35.0% |
| AAAAAAAGTAAGGGTGGAAG+TGG | - | chr1_2:33096856-33096875 | None:intergenic | 35.0% | |
| TTAATTGAATAGTCGGTCTC+TGG | - | chr1_2:33097047-33097066 | None:intergenic | 35.0% | |
| ATTGCTTGACCCTAAATTTG+AGG | + | chr1_2:33097170-33097189 | Msa0067790:intron | 35.0% | |
| ATTTACCGAGCTGATTATGA+GGG | + | chr1_2:33097361-33097380 | Msa0067790:CDS | 35.0% | |
| AAATTCCCTCATAATCAGCT+CGG | - | chr1_2:33097369-33097388 | None:intergenic | 35.0% | |
| TGTCAGCTGTGAAGAATATA+AGG | + | chr1_2:33097393-33097412 | Msa0067790:CDS | 35.0% | |
| GTACAAGCTCTTTACTTAGA+AGG | + | chr1_2:33097473-33097492 | Msa0067790:intron | 35.0% | |
| !! | CTTGCTTCTAGAACTTCAAA+TGG | + | chr1_2:33097505-33097524 | Msa0067790:intron | 35.0% |
| !! | AATGTATTGCTATTTGGTGC+AGG | + | chr1_2:33097636-33097655 | Msa0067790:intron | 35.0% |
| GTCAAAATATCAGAAGTCAC+TGG | + | chr1_2:33097747-33097766 | Msa0067790:CDS | 35.0% | |
| AAAATATCAGAAGTCACTGG+AGG | + | chr1_2:33097750-33097769 | Msa0067790:CDS | 35.0% | |
| AAAGATGGCTGCACAAAATT+TGG | - | chr1_2:33097793-33097812 | None:intergenic | 35.0% | |
| ATTCCTTTACCTCGTGTAAA+CGG | - | chr1_2:33097816-33097835 | None:intergenic | 35.0% | |
| TTACACGAGGTAAAGGAATA+TGG | + | chr1_2:33097817-33097836 | Msa0067790:intron | 35.0% | |
| GAAATGTAACAGACATACAG+AGG | - | chr1_2:33097880-33097899 | None:intergenic | 35.0% | |
| !! | TGTAAGGAGTGTTAATTGAC+TGG | - | chr1_2:33098085-33098104 | None:intergenic | 35.0% |
| !! | ATTTTTATTTGCAACACCCC+TGG | + | chr1_2:33098158-33098177 | Msa0067790:intron | 35.0% |
| ACATATATTGGGTGTAGAAG+AGG | + | chr1_2:33098264-33098283 | Msa0067790:intron | 35.0% | |
| CATATATTGGGTGTAGAAGA+GGG | + | chr1_2:33098265-33098284 | Msa0067790:intron | 35.0% | |
| TAAAACAAACACACGGACAA+GGG | - | chr1_2:33098340-33098359 | None:intergenic | 35.0% | |
| ATAAAACAAACACACGGACA+AGG | - | chr1_2:33098341-33098360 | None:intergenic | 35.0% | |
| TCATGAAATACCTATCTCAC+AGG | - | chr1_2:33098548-33098567 | None:intergenic | 35.0% | |
| CCCATTTGAAAGAGATGATA+TGG | - | chr1_2:33098574-33098593 | None:intergenic | 35.0% | |
| GTATGGTTTGATGCTTTACT+AGG | + | chr1_2:33098820-33098839 | Msa0067790:CDS | 35.0% | |
| ! | TTAACATTATCGGTGCTTGA+CGG | + | chr1_2:33098918-33098937 | Msa0067790:intron | 35.0% |
| !!! | GACTATTATTTTGAGACGGA+GGG | - | chr1_2:33099045-33099064 | None:intergenic | 35.0% |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr1_2:33099161-33099180 | Msa0067790:intron | 35.0% | |
| AGACAGGAATAATGCTAAAG+AGG | + | chr1_2:33099269-33099288 | Msa0067790:intron | 35.0% | |
| !! | GCTGTACTCTTAACTTGTTA+AGG | + | chr1_2:33099647-33099666 | Msa0067790:intron | 35.0% |
| CAATCCCAAATACTAGGAAA+AGG | + | chr1_2:33099751-33099770 | Msa0067790:intron | 35.0% | |
| ! | GATAGCCTTTTCCTAGTATT+TGG | - | chr1_2:33099759-33099778 | None:intergenic | 35.0% |
| GGTCAAAATCTCTTTCTACT+CGG | + | chr1_2:33099789-33099808 | Msa0067790:intron | 35.0% | |
| TGGTGTGTAATTACTCAAGA+TGG | - | chr1_2:33099821-33099840 | None:intergenic | 35.0% | |
| ATTATATGGCTTCTTCCCTT+AGG | + | chr1_2:33099977-33099996 | Msa0067790:intron | 35.0% | |
| GTAAGTAATAGGACTCCTAA+GGG | - | chr1_2:33099995-33100014 | None:intergenic | 35.0% | |
| TGTAAGTAATAGGACTCCTA+AGG | - | chr1_2:33099996-33100015 | None:intergenic | 35.0% | |
| ATACCTTTGTCAAGAATCCA+TGG | - | chr1_2:33100147-33100166 | None:intergenic | 35.0% | |
| CATCTCTTCTAAGTAAGAGA+TGG | - | chr1_2:33100245-33100264 | None:intergenic | 35.0% | |
| !!! | TGTTCACAATGGTTTTGGTT+TGG | - | chr1_2:33100388-33100407 | None:intergenic | 35.0% |
| ! | TGTACTGTTCACAATGGTTT+TGG | - | chr1_2:33100393-33100412 | None:intergenic | 35.0% |
| TGTGTGATTGAAAACTGAAG+TGG | - | chr1_2:33100437-33100456 | None:intergenic | 35.0% | |
| ! | ACTTCAGTTTTCAATCACAC+AGG | + | chr1_2:33100436-33100455 | Msa0067790:intron | 35.0% |
| TCAATGCTTCTTTGTTGCAT+TGG | + | chr1_2:33100867-33100886 | Msa0067790:intron | 35.0% | |
| !!! | TCTCCTCTTTTTTGATAGCT+AGG | + | chr1_2:33101252-33101271 | Msa0067790:intron | 35.0% |
| GTTCAATAACATTGAGGTGA+TGG | + | chr1_2:33101340-33101359 | Msa0067790:intron | 35.0% | |
| AATCTGGTCAAAATGTGGTT+AGG | + | chr1_2:33101578-33101597 | Msa0067790:intron | 35.0% | |
| ATGTTAGGATGGTATGAAGA+TGG | + | chr1_2:33101828-33101847 | Msa0067790:intron | 35.0% | |
| TGTTAGGATGGTATGAAGAT+GGG | + | chr1_2:33101829-33101848 | Msa0067790:intron | 35.0% | |
| ! | GCTCAAAGTACCAATTGTAT+TGG | - | chr1_2:33102007-33102026 | None:intergenic | 35.0% |
| TGTTACAAGCAATGAAAGCA+AGG | - | chr1_2:33102029-33102048 | None:intergenic | 35.0% | |
| !!! | ATCTCTTTCACTATTTTGGC+AGG | + | chr1_2:33102105-33102124 | Msa0067790:intron | 35.0% |
| TGGCAGGAAATCTTCTTAAT+AGG | + | chr1_2:33102121-33102140 | Msa0067790:intron | 35.0% | |
| TGCAGAAGGAAATGCATTTA+AGG | + | chr1_2:33102203-33102222 | Msa0067790:CDS | 35.0% | |
| TAACCTCAAACTGTTGCAAA+AGG | - | chr1_2:33102306-33102325 | None:intergenic | 35.0% | |
| TGCAAACTGTTCCTTCTATT+TGG | + | chr1_2:33102326-33102345 | Msa0067790:intron | 35.0% | |
| TAAACACAGGACCAAATAGA+AGG | - | chr1_2:33102340-33102359 | None:intergenic | 35.0% | |
| ! | TGAATACAATTTTCTGGGCA+GGG | - | chr1_2:33102466-33102485 | None:intergenic | 35.0% |
| ! | ATGAATACAATTTTCTGGGC+AGG | - | chr1_2:33102467-33102486 | None:intergenic | 35.0% |
| ! | CAACCATTGTTGATAAGTTG+TGG | + | chr1_2:33102683-33102702 | Msa0067790:intron | 35.0% |
| TTGATCAACCTTTGTGTTAC+AGG | - | chr1_2:33102715-33102734 | None:intergenic | 35.0% | |
| TATGTTCGAGGATAAAACCT+TGG | - | chr1_2:33102904-33102923 | None:intergenic | 35.0% | |
| ! | TCACTTCTTTTCGTTTGTGT+TGG | + | chr1_2:33103226-33103245 | Msa0067790:intron | 35.0% |
| TTCACTTATGATATTGGAGC+AGG | + | chr1_2:33103276-33103295 | Msa0067790:intron | 35.0% | |
| TATATTCTCCAACTCAAGCT+CGG | - | chr1_2:33103361-33103380 | None:intergenic | 35.0% | |
| TGGAGAATATATGCTCAACT+TGG | + | chr1_2:33103370-33103389 | Msa0067790:CDS | 35.0% | |
| ATTGTAGAGAGATACCAAGT+GGG | + | chr1_2:33103500-33103519 | Msa0067790:intron | 35.0% | |
| ! | TTTTCAATCCTAGCAAAGAC+TGG | - | chr1_2:33103564-33103583 | None:intergenic | 35.0% |
| AAACTGAAGTGGAAGACAAA+GGG | + | chr1_2:33103586-33103605 | Msa0067790:CDS | 35.0% | |
| AAACAAGCTCAAGAAGTTGT+TGG | + | chr1_2:33103651-33103670 | Msa0067790:CDS | 35.0% | |
| GCATTATGCATGTGTATGTA+TGG | + | chr1_2:33103825-33103844 | Msa0067790:intron | 35.0% | |
| !! | CTTTTTGGGAATAAAGTTCG+TGG | + | chr1_2:33103877-33103896 | Msa0067790:three_prime_UTR | 35.0% |
| GGAAAATCTCCATCAACATG+TGG | + | chr1_2:33096219-33096238 | Msa0067790:CDS | 40.0% | |
| ACGCTTATTCCACATGTTGA+TGG | - | chr1_2:33096231-33096250 | None:intergenic | 40.0% | |
| ATCCACCTGATATACCAAAC+TGG | + | chr1_2:33096264-33096283 | Msa0067790:intron | 40.0% | |
| !! | CTAACTTTCGTGGGTTAGTT+TGG | + | chr1_2:33096616-33096635 | Msa0067790:intron | 40.0% |
| ! | TGTAATTTGACAGCGGCTTT+TGG | + | chr1_2:33096690-33096709 | Msa0067790:intron | 40.0% |
| ! | GTAATTTGACAGCGGCTTTT+GGG | + | chr1_2:33096691-33096710 | Msa0067790:intron | 40.0% |
| CTTGTGAAATGAGATTGCAG+TGG | - | chr1_2:33096804-33096823 | None:intergenic | 40.0% | |
| ACGGACATTGTTCACGTTAA+GGG | - | chr1_2:33096960-33096979 | None:intergenic | 40.0% | |
| CATTTACCGAGCTGATTATG+AGG | + | chr1_2:33097360-33097379 | Msa0067790:CDS | 40.0% | |
| TTTCCCATCATCAGATTGAG+AGG | - | chr1_2:33097569-33097588 | None:intergenic | 40.0% | |
| TTGAAACACAAGGCTTAAGG+TGG | - | chr1_2:33097699-33097718 | None:intergenic | 40.0% | |
| ! | ACCTTAAGCCTTGTGTTTCA+AGG | + | chr1_2:33097698-33097717 | Msa0067790:CDS | 40.0% |
| TCCTTGAAACACAAGGCTTA+AGG | - | chr1_2:33097702-33097721 | None:intergenic | 40.0% | |
| TCCTCTTTCCTTGAAACACA+AGG | - | chr1_2:33097709-33097728 | None:intergenic | 40.0% | |
| TTTCCGTTTACACGAGGTAA+AGG | + | chr1_2:33097810-33097829 | Msa0067790:intron | 40.0% | |
| TCACTAGAGACTGTTCACAA+TGG | + | chr1_2:33097957-33097976 | Msa0067790:intron | 40.0% | |
| AAAACAAACACACGGACAAG+GGG | - | chr1_2:33098339-33098358 | None:intergenic | 40.0% | |
| !! | TAATTTTGGGGAAGCATGCA+GGG | - | chr1_2:33098498-33098517 | None:intergenic | 40.0% |
| GTTCAAACCTGGATCAAAAG+TGG | + | chr1_2:33098718-33098737 | Msa0067790:CDS | 40.0% | |
| ! | ATAGTCTGAGTCTTGTCACT+CGG | - | chr1_2:33098796-33098815 | None:intergenic | 40.0% |
| !!! | CGACTATTATTTTGAGACGG+AGG | - | chr1_2:33099046-33099065 | None:intergenic | 40.0% |
| ! | TTAGTAAATCAGGTTGCTCC+TGG | - | chr1_2:33099423-33099442 | None:intergenic | 40.0% |
| TACACTGCACTTGATTGGTA+AGG | + | chr1_2:33099468-33099487 | Msa0067790:CDS | 40.0% | |
| ! | TACGTTTCCATGCCGTTTAT+TGG | + | chr1_2:33100071-33100090 | Msa0067790:CDS | 40.0% |
| TAGCATAGCTGGCCAATAAA+CGG | - | chr1_2:33100086-33100105 | None:intergenic | 40.0% | |
| AGCCTTCCCAAAATGGTATA+TGG | + | chr1_2:33100121-33100140 | Msa0067790:CDS | 40.0% | |
| ! | CCATGGCCATATACCATTTT+GGG | - | chr1_2:33100130-33100149 | None:intergenic | 40.0% |
| ! | TCCATGGCCATATACCATTT+TGG | - | chr1_2:33100131-33100150 | None:intergenic | 40.0% |
| GATCAGTGTACTGTTCACAA+TGG | - | chr1_2:33100399-33100418 | None:intergenic | 40.0% | |
| TCAATCACGTACTCATTGCT+AGG | - | chr1_2:33100927-33100946 | None:intergenic | 40.0% | |
| GAGCTTGAAATATGGTGAGT+CGG | - | chr1_2:33101003-33101022 | None:intergenic | 40.0% | |
| CAGGAGAAGAGCTTGAAATA+TGG | - | chr1_2:33101011-33101030 | None:intergenic | 40.0% | |
| ! | CGAACTGAACTTTGAGAAGT+TGG | + | chr1_2:33101046-33101065 | Msa0067790:intron | 40.0% |
| ! | ACTGAACTTTGAGAAGTTGG+TGG | + | chr1_2:33101049-33101068 | Msa0067790:intron | 40.0% |
| AAACTGCAAAAGAGCCAAAC+TGG | - | chr1_2:33101123-33101142 | None:intergenic | 40.0% | |
| !!! | AGTTTGGCTCTTTTGCAGTT+TGG | + | chr1_2:33101122-33101141 | Msa0067790:intron | 40.0% |
| ! | CATTAATTTGGGCCAGTTCA+CGG | - | chr1_2:33101187-33101206 | None:intergenic | 40.0% |
| TGTCAAATCTGAGCAAAGCA+AGG | + | chr1_2:33101212-33101231 | Msa0067790:intron | 40.0% | |
| GTCAAATCTGAGCAAAGCAA+GGG | + | chr1_2:33101213-33101232 | Msa0067790:intron | 40.0% | |
| TGGCCTAGCTATCAAAAAAG+AGG | - | chr1_2:33101258-33101277 | None:intergenic | 40.0% | |
| TGGTCAAAATGTGGTTAGGA+TGG | + | chr1_2:33101582-33101601 | Msa0067790:intron | 40.0% | |
| GGTCAAAATGTGGTTAGGAT+GGG | + | chr1_2:33101583-33101602 | Msa0067790:intron | 40.0% | |
| GTCAAAATGTGGTTAGGATG+GGG | + | chr1_2:33101584-33101603 | Msa0067790:intron | 40.0% | |
| TCAAAATGTGGTTAGGATGG+GGG | + | chr1_2:33101585-33101604 | Msa0067790:intron | 40.0% | |
| ! | TTAGGATGGGGGTATATGAT+TGG | + | chr1_2:33101596-33101615 | Msa0067790:intron | 40.0% |
| TACGCTTGAACCAAACGATT+TGG | + | chr1_2:33101867-33101886 | Msa0067790:CDS | 40.0% | |
| TAGATACTTCTTCCTCAGAG+AGG | + | chr1_2:33101915-33101934 | Msa0067790:CDS | 40.0% | |
| AGGTGGAATTTGGCAATGAT+GGG | + | chr1_2:33101935-33101954 | Msa0067790:CDS | 40.0% | |
| GCACATCTTGCCAATACAAT+TGG | + | chr1_2:33101994-33102013 | Msa0067790:CDS | 40.0% | |
| AAAGAACTGCCAATCAACAC+TGG | + | chr1_2:33102161-33102180 | Msa0067790:CDS | 40.0% | |
| !! | AATTCACTGCCAGTGTTGAT+TGG | - | chr1_2:33102173-33102192 | None:intergenic | 40.0% |
| CATTTAAGGACAATGTAGCG+AGG | + | chr1_2:33102217-33102236 | Msa0067790:CDS | 40.0% | |
| ! | ATGCCTTTTGCAACAGTTTG+AGG | + | chr1_2:33102300-33102319 | Msa0067790:intron | 40.0% |
| GTTTAGATTGTTTCATCCGG+CGG | - | chr1_2:33102372-33102391 | None:intergenic | 40.0% | |
| CTCCCACAACTTATCAACAA+TGG | - | chr1_2:33102689-33102708 | None:intergenic | 40.0% | |
| TTGCTTAAAGAGAGACCAAG+GGG | - | chr1_2:33102856-33102875 | None:intergenic | 40.0% | |
| CTTGCTTAAAGAGAGACCAA+GGG | - | chr1_2:33102857-33102876 | None:intergenic | 40.0% | |
| AGTAACAGGAGATAGTGCAA+TGG | - | chr1_2:33103338-33103357 | None:intergenic | 40.0% | |
| AAAGATAGAGAGAGATACCC+AGG | - | chr1_2:33103425-33103444 | None:intergenic | 40.0% | |
| CATTGTAGAGAGATACCAAG+TGG | + | chr1_2:33103499-33103518 | Msa0067790:intron | 40.0% | |
| TTGTAGAGAGATACCAAGTG+GGG | + | chr1_2:33103501-33103520 | Msa0067790:intron | 40.0% | |
| CAAACTGAAGTGGAAGACAA+AGG | + | chr1_2:33103585-33103604 | Msa0067790:CDS | 40.0% | |
| AACTGAAGTGGAAGACAAAG+GGG | + | chr1_2:33103587-33103606 | Msa0067790:CDS | 40.0% | |
| GAGACTCTTAGATCAGCTAG+AGG | + | chr1_2:33096198-33096217 | Msa0067790:CDS | 45.0% | |
| !! | ATTACTGGCACCGATGAACA+CGG | + | chr1_2:33096730-33096749 | Msa0067790:CDS | 45.0% |
| TGAGATTGCAGTGGTCAGTA+GGG | - | chr1_2:33096795-33096814 | None:intergenic | 45.0% | |
| ATGAGATTGCAGTGGTCAGT+AGG | - | chr1_2:33096796-33096815 | None:intergenic | 45.0% | |
| CACAAGCTTACAAGACGCTT+TGG | + | chr1_2:33096818-33096837 | Msa0067790:CDS | 45.0% | |
| GACGGACATTGTTCACGTTA+AGG | - | chr1_2:33096961-33096980 | None:intergenic | 45.0% | |
| CAAGCATGAAGCAGTTGTGA+AGG | + | chr1_2:33097306-33097325 | Msa0067790:CDS | 45.0% | |
| !! | TATTCGAGAGTGCTTGCCAA+CGG | + | chr1_2:33097334-33097353 | Msa0067790:CDS | 45.0% |
| ACTGCCTCTCAATCTGATGA+TGG | + | chr1_2:33097562-33097581 | Msa0067790:intron | 45.0% | |
| CTGCCTCTCAATCTGATGAT+GGG | + | chr1_2:33097563-33097582 | Msa0067790:intron | 45.0% | |
| !! | CTATTTGGTGCAGGATGAGA+AGG | + | chr1_2:33097645-33097664 | Msa0067790:intron | 45.0% |
| ACACAAGGCTTAAGGTGGAT+CGG | - | chr1_2:33097694-33097713 | None:intergenic | 45.0% | |
| GCCTTGTGTTTCAAGGAAAG+AGG | + | chr1_2:33097705-33097724 | Msa0067790:CDS | 45.0% | |
| ACCTCGTGTAAACGGAAAGA+TGG | - | chr1_2:33097808-33097827 | None:intergenic | 45.0% | |
| AGTCATGTCATCTCATGCCA+GGG | - | chr1_2:33098178-33098197 | None:intergenic | 45.0% | |
| TAGTCATGTCATCTCATGCC+AGG | - | chr1_2:33098179-33098198 | None:intergenic | 45.0% | |
| !! | AATTTTGGGGAAGCATGCAG+GGG | - | chr1_2:33098497-33098516 | None:intergenic | 45.0% |
| !! | CTAATTTTGGGGAAGCATGC+AGG | - | chr1_2:33098499-33098518 | None:intergenic | 45.0% |
| GCATGCTTCCCCAAAATTAG+TGG | + | chr1_2:33098499-33098518 | Msa0067790:intron | 45.0% | |
| AGCAGTTTCACCTGTGAGAT+AGG | + | chr1_2:33098535-33098554 | Msa0067790:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1_2:33098656-33098675 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1_2:33098657-33098676 | None:intergenic | 45.0% |
| ! | CTTTTCCATTTCCCGAGCAT+CGG | + | chr1_2:33098750-33098769 | Msa0067790:CDS | 45.0% |
| AAAGAGCCAGGGAAAGTAAG+AGG | - | chr1_2:33098878-33098897 | None:intergenic | 45.0% | |
| !!! | AGGCTACTGTTTTGAGACAG+AGG | + | chr1_2:33099289-33099308 | Msa0067790:intron | 45.0% |
| !!! | GGCTACTGTTTTGAGACAGA+GGG | + | chr1_2:33099290-33099309 | Msa0067790:intron | 45.0% |
| CAGCTATGCTAATGTCTGCT+GGG | + | chr1_2:33100095-33100114 | Msa0067790:CDS | 45.0% | |
| !! | GGCCATATACCATTTTGGGA+AGG | - | chr1_2:33100126-33100145 | None:intergenic | 45.0% |
| CCCAAAATGGTATATGGCCA+TGG | + | chr1_2:33100127-33100146 | Msa0067790:CDS | 45.0% | |
| TGGCCATGGATTCTTGACAA+AGG | + | chr1_2:33100141-33100160 | Msa0067790:CDS | 45.0% | |
| CAGTTCACTGAACCATGAAC+AGG | - | chr1_2:33100274-33100293 | None:intergenic | 45.0% | |
| GAAGTGGTGATTGAGCAGTT+CGG | - | chr1_2:33100421-33100440 | None:intergenic | 45.0% | |
| ! | TCTTTGTTGCATTGGCCACT+TGG | + | chr1_2:33100875-33100894 | Msa0067790:intron | 45.0% |
| CACTTGGACTGACATGCTTT+CGG | + | chr1_2:33100891-33100910 | Msa0067790:intron | 45.0% | |
| ! | CTGACATGCTTTCGGACTTT+TGG | + | chr1_2:33100899-33100918 | Msa0067790:intron | 45.0% |
| TTCAAGCTCTTCTCCTGAAC+TGG | + | chr1_2:33101014-33101033 | Msa0067790:intron | 45.0% | |
| TCAAGCTCTTCTCCTGAACT+GGG | + | chr1_2:33101015-33101034 | Msa0067790:intron | 45.0% | |
| !! | TTCGCTTTAGAACCCAGTTC+AGG | - | chr1_2:33101030-33101049 | None:intergenic | 45.0% |
| ACTGAACTGCTTCACCAGTT+TGG | + | chr1_2:33101106-33101125 | Msa0067790:intron | 45.0% | |
| ATGAAGATGGGCAAGTCACT+AGG | + | chr1_2:33101841-33101860 | Msa0067790:CDS | 45.0% | |
| ATACTTCTTCCTCAGAGAGG+TGG | + | chr1_2:33101918-33101937 | Msa0067790:CDS | 45.0% | |
| TTCCTCAGAGAGGTGGAATT+TGG | + | chr1_2:33101925-33101944 | Msa0067790:CDS | 45.0% | |
| GAGGTGGAATTTGGCAATGA+TGG | + | chr1_2:33101934-33101953 | Msa0067790:CDS | 45.0% | |
| GGTGGAATTTGGCAATGATG+GGG | + | chr1_2:33101936-33101955 | Msa0067790:CDS | 45.0% | |
| ! | CAATGATGGGGACTATTCAG+AGG | + | chr1_2:33101948-33101967 | Msa0067790:CDS | 45.0% |
| ACTGGCAGTGAATTCCACTA+CGG | + | chr1_2:33102179-33102198 | Msa0067790:CDS | 45.0% | |
| !! | GTTCTGGAGATTGGTAATGC+TGG | + | chr1_2:33102807-33102826 | Msa0067790:CDS | 45.0% |
| CCTTGCTTAAAGAGAGACCA+AGG | - | chr1_2:33102858-33102877 | None:intergenic | 45.0% | |
| CCTTGGTCTCTCTTTAAGCA+AGG | + | chr1_2:33102855-33102874 | Msa0067790:CDS | 45.0% | |
| TGGTCTCTCTTTAAGCAAGG+AGG | + | chr1_2:33102858-33102877 | Msa0067790:CDS | 45.0% | |
| ATGCTCAACTTGGCTATTCC+AGG | + | chr1_2:33103380-33103399 | Msa0067790:CDS | 45.0% | |
| TGCTCAACTTGGCTATTCCA+GGG | + | chr1_2:33103381-33103400 | Msa0067790:CDS | 45.0% | |
| ACCAATTTGATGCAGCAACC+TGG | + | chr1_2:33103404-33103423 | Msa0067790:CDS | 45.0% | |
| CCAATTTGATGCAGCAACCT+GGG | + | chr1_2:33103405-33103424 | Msa0067790:CDS | 45.0% | |
| AACCTCAACCAGTCTTTGCT+AGG | + | chr1_2:33103553-33103572 | Msa0067790:CDS | 45.0% | |
| ! | ATCCTAGCAAAGACTGGTTG+AGG | - | chr1_2:33103558-33103577 | None:intergenic | 45.0% |
| GAGACGGAGGGACAAATTTG+TGG | - | chr1_2:33096418-33096437 | None:intergenic | 50.0% | |
| GAGATTGCAGTGGTCAGTAG+GGG | - | chr1_2:33096794-33096813 | None:intergenic | 50.0% | |
| AGCTCGGTAAATGTCACCGT+TGG | - | chr1_2:33097353-33097372 | None:intergenic | 50.0% | |
| GCCATCTTTCCGTTTACACG+AGG | + | chr1_2:33097804-33097823 | Msa0067790:CDS | 50.0% | |
| GTCATGTCATCTCATGCCAG+GGG | - | chr1_2:33098177-33098196 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1_2:33098652-33098671 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1_2:33098658-33098677 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr1_2:33098655-33098674 | Msa0067790:intron | 50.0% | |
| ATCAACCGATGCTCGGGAAA+TGG | - | chr1_2:33098758-33098777 | None:intergenic | 50.0% | |
| !! | TTTCCCGAGCATCGGTTGAT+TGG | + | chr1_2:33098758-33098777 | Msa0067790:CDS | 50.0% |
| !! | TTCCCGAGCATCGGTTGATT+GGG | + | chr1_2:33098759-33098778 | Msa0067790:CDS | 50.0% |
| ! | TGAGTCTTGTCACTCGGAAC+AGG | - | chr1_2:33098790-33098809 | None:intergenic | 50.0% |
| AGTGCTCCTCTTACTTTCCC+TGG | + | chr1_2:33098869-33098888 | Msa0067790:intron | 50.0% | |
| GGTGCTTGACGGAAATACGT+TGG | + | chr1_2:33098929-33098948 | Msa0067790:intron | 50.0% | |
| ATCAGCACTAGCTGATGACC+AGG | + | chr1_2:33099402-33099421 | Msa0067790:CDS | 50.0% | |
| CCAATCAAGTGCAGTGTAGC+TGG | - | chr1_2:33099466-33099485 | None:intergenic | 50.0% | |
| CCAGCTACACTGCACTTGAT+TGG | + | chr1_2:33099463-33099482 | Msa0067790:CDS | 50.0% | |
| TAGCTGGCCAATAAACGGCA+TGG | - | chr1_2:33100081-33100100 | None:intergenic | 50.0% | |
| CCAGCAGACATTAGCATAGC+TGG | - | chr1_2:33100097-33100116 | None:intergenic | 50.0% | |
| CCAGCTATGCTAATGTCTGC+TGG | + | chr1_2:33100094-33100113 | Msa0067790:CDS | 50.0% | |
| TGGGCTAAGCCTTCCCAAAA+TGG | + | chr1_2:33100114-33100133 | Msa0067790:CDS | 50.0% | |
| !! | GAGATGCTGACTCCTGTTCA+TGG | + | chr1_2:33100259-33100278 | Msa0067790:intron | 50.0% |
| AGTTCACCGCAAAACTGCAG+CGG | - | chr1_2:33100348-33100367 | None:intergenic | 50.0% | |
| ! | GCAGTTTTGCGGTGAACTGT+TGG | + | chr1_2:33100350-33100369 | Msa0067790:intron | 50.0% |
| ! | CGAAAGCATGTCAGTCCAAG+TGG | - | chr1_2:33100893-33100912 | None:intergenic | 50.0% |
| TATGGTGAGTCGGTGACCAA+TGG | - | chr1_2:33100993-33101012 | None:intergenic | 50.0% | |
| TGCCAAATTCCACCTCTCTG+AGG | - | chr1_2:33101930-33101949 | None:intergenic | 50.0% | |
| AATTCCACTACGGCTGCAGA+AGG | + | chr1_2:33102189-33102208 | Msa0067790:CDS | 50.0% | |
| ATTTCCTTCTGCAGCCGTAG+TGG | - | chr1_2:33102196-33102215 | None:intergenic | 50.0% | |
| TAAGGACAATGTAGCGAGGC+TGG | + | chr1_2:33102221-33102240 | Msa0067790:CDS | 50.0% | |
| GCGGCAGGTGAATTAAACAC+AGG | - | chr1_2:33102353-33102372 | None:intergenic | 50.0% | |
| GTGTTTAATTCACCTGCCGC+CGG | + | chr1_2:33102353-33102372 | Msa0067790:intron | 50.0% | |
| AGCCTCACAAGCTGATGTCA+GGG | - | chr1_2:33102787-33102806 | None:intergenic | 50.0% | |
| ATCAGCTTGTGAGGCTGTTC+TGG | + | chr1_2:33102791-33102810 | Msa0067790:CDS | 50.0% | |
| !! | TGTGAGGCTGTTCTGGAGAT+TGG | + | chr1_2:33102798-33102817 | Msa0067790:CDS | 50.0% |
| CAACTCAAGCTCGGAGTAAC+AGG | - | chr1_2:33103352-33103371 | None:intergenic | 50.0% | |
| CTGTTACTCCGAGCTTGAGT+TGG | + | chr1_2:33103350-33103369 | Msa0067790:CDS | 50.0% | |
| TGCTGCATCAAATTGGTCCC+TGG | - | chr1_2:33103401-33103420 | None:intergenic | 50.0% | |
| CCCAGGTTGCTGCATCAAAT+TGG | - | chr1_2:33103408-33103427 | None:intergenic | 50.0% | |
| TAGAGAGATACCAAGTGGGG+TGG | + | chr1_2:33103504-33103523 | Msa0067790:intron | 50.0% | |
| ! | TACCAAGTGGGGTGGACTTA+AGG | + | chr1_2:33103512-33103531 | Msa0067790:CDS | 50.0% |
| ! | ACCAAGTGGGGTGGACTTAA+GGG | + | chr1_2:33103513-33103532 | Msa0067790:CDS | 50.0% |
| ACTTAAGGGTGGTCAGGTCA+TGG | + | chr1_2:33103527-33103546 | Msa0067790:CDS | 50.0% | |
| GAAGACAAAGGGGTTGCAGT+TGG | + | chr1_2:33103597-33103616 | Msa0067790:CDS | 50.0% | |
| ATTGCAGTGGTCAGTAGGGG+TGG | - | chr1_2:33096791-33096810 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1_2:33098644-33098663 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1_2:33098643-33098662 | Msa0067790:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1_2:33098644-33098663 | Msa0067790:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1_2:33098650-33098669 | Msa0067790:intron | 55.0% | |
| CCTGGATCAAAAGTGGCCTG+CGG | + | chr1_2:33098725-33098744 | Msa0067790:CDS | 55.0% | |
| CTGGATCAAAAGTGGCCTGC+GGG | + | chr1_2:33098726-33098745 | Msa0067790:CDS | 55.0% | |
| GGGAAATGGAAAAGTCCCGC+AGG | - | chr1_2:33098744-33098763 | None:intergenic | 55.0% | |
| !! | TCCCGAGCATCGGTTGATTG+GGG | + | chr1_2:33098760-33098779 | Msa0067790:CDS | 55.0% |
| TGCCCCAATCAACCGATGCT+CGG | - | chr1_2:33098765-33098784 | None:intergenic | 55.0% | |
| AGATTGTTTCATCCGGCGGC+AGG | - | chr1_2:33102368-33102387 | None:intergenic | 55.0% | |
| GGGAGCTGCCTGTAACACAA+AGG | + | chr1_2:33102704-33102723 | Msa0067790:intron | 55.0% | |
| CTCCCTGACATCAGCTTGTG+AGG | + | chr1_2:33102782-33102801 | Msa0067790:CDS | 55.0% | |
| CAGCCTCACAAGCTGATGTC+AGG | - | chr1_2:33102788-33102807 | None:intergenic | 55.0% | |
| !! | TGCTTCTGAAGCAGCTGCCA+AGG | + | chr1_2:33102884-33102903 | Msa0067790:CDS | 55.0% |
| ACCCTTAAGTCCACCCCACT+TGG | - | chr1_2:33103517-33103536 | None:intergenic | 55.0% | |
| ! | AAGTGGGGTGGACTTAAGGG+TGG | + | chr1_2:33103516-33103535 | Msa0067790:CDS | 55.0% |
| TGCAACTGCTGCCACTGCTC+AGG | + | chr1_2:33096762-33096781 | Msa0067790:CDS | 60.0% | |
| GCAACTGCTGCCACTGCTCA+GGG | + | chr1_2:33096763-33096782 | Msa0067790:CDS | 60.0% | |
| ! | TGGGGAAGCATGCAGGGGTA+GGG | - | chr1_2:33098492-33098511 | None:intergenic | 60.0% |
| ! | TTGGGGAAGCATGCAGGGGT+AGG | - | chr1_2:33098493-33098512 | None:intergenic | 60.0% |
| !!! | CCGCAGGCCACTTTTGATCC+AGG | - | chr1_2:33098728-33098747 | None:intergenic | 60.0% |
| GCCCCAATCAACCGATGCTC+GGG | - | chr1_2:33098764-33098783 | None:intergenic | 60.0% | |
| ! | ACCACGCCGCTGCAGTTTTG+CGG | + | chr1_2:33100339-33100358 | Msa0067790:intron | 60.0% |
| ! | AGGGGCACGCTCGTCCATAT+AGG | - | chr1_2:33102838-33102857 | None:intergenic | 60.0% |
| ATATGGACGAGCGTGCCCCT+TGG | + | chr1_2:33102838-33102857 | Msa0067790:CDS | 60.0% | |
| ! | GGGTGGACTTAAGGGTGGTC+AGG | + | chr1_2:33103521-33103540 | Msa0067790:CDS | 60.0% |
| AGGGGTGGAACCCTGAGCAG+TGG | - | chr1_2:33096776-33096795 | None:intergenic | 65.0% | |
| ACCGCAAAACTGCAGCGGCG+TGG | - | chr1_2:33100343-33100362 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 33096159 | 33103906 | 33096159 | ID=Msa0067790;Name=Msa0067790 |
| chr1_2 | mRNA | 33096159 | 33103906 | 33096159 | ID=Msa0067790-mRNA-1;Parent=Msa0067790;Name=Msa0067790-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.91|0.84|0.92|0.91|0.84|13|193|541 |
| chr1_2 | exon | 33096159 | 33096248 | 33096159 | ID=Msa0067790-mRNA-1:exon:10885;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33096703 | 33096846 | 33096703 | ID=Msa0067790-mRNA-1:exon:10886;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33097265 | 33097414 | 33097265 | ID=Msa0067790-mRNA-1:exon:10887;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33097658 | 33097825 | 33097658 | ID=Msa0067790-mRNA-1:exon:10888;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33098718 | 33098842 | 33098718 | ID=Msa0067790-mRNA-1:exon:10889;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33099396 | 33099489 | 33099396 | ID=Msa0067790-mRNA-1:exon:10890;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33100064 | 33100162 | 33100064 | ID=Msa0067790-mRNA-1:exon:10891;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33101835 | 33102015 | 33101835 | ID=Msa0067790-mRNA-1:exon:10892;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33102127 | 33102242 | 33102127 | ID=Msa0067790-mRNA-1:exon:10893;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33102750 | 33102905 | 33102750 | ID=Msa0067790-mRNA-1:exon:10894;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33103298 | 33103426 | 33103298 | ID=Msa0067790-mRNA-1:exon:10895;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33103507 | 33103806 | 33103507 | ID=Msa0067790-mRNA-1:exon:10896;Parent=Msa0067790-mRNA-1 |
| chr1_2 | exon | 33103840 | 33103906 | 33103840 | ID=Msa0067790-mRNA-1:exon:10897;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33096159 | 33096248 | 33096159 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33096703 | 33096846 | 33096703 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33097265 | 33097414 | 33097265 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33097658 | 33097825 | 33097658 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33098718 | 33098842 | 33098718 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33099396 | 33099489 | 33099396 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33100064 | 33100162 | 33100064 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33101835 | 33102015 | 33101835 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33102127 | 33102242 | 33102127 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33102750 | 33102905 | 33102750 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33103298 | 33103426 | 33103298 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | CDS | 33103507 | 33103680 | 33103507 | ID=Msa0067790-mRNA-1:cds;Parent=Msa0067790-mRNA-1 |
| chr1_2 | three_prime_UTR | 33103681 | 33103806 | 33103681 | ID=Msa0067790-mRNA-1:three_prime_utr;Parent=Msa0067790-mRNA-1 |
| chr1_2 | three_prime_UTR | 33103840 | 33103906 | 33103840 | ID=Msa0067790-mRNA-1:three_prime_utr;Parent=Msa0067790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
