AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0027240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027240 MtrunA17_Chr1g0183321 96.438 758 27 0 1 758 1 758 0.0 1523
Msa0027240 MtrunA17_Chr7g0262001 51.020 784 280 21 5 757 3 713 0.0 653
Msa0027240 MtrunA17_Chr1g0190311 59.337 332 130 5 418 746 315 644 2.56e-143 436
Msa0027240 MtrunA17_Chr1g0190311 36.607 112 59 3 6 113 4 107 1.39e-11 68.2
Msa0027240 MtrunA17_Chr8g0392541 50.698 215 82 6 418 629 106 299 2.89e-62 211
Msa0027240 MtrunA17_Chr5g0399801 30.000 330 161 11 428 741 809 1084 6.37e-32 133
Msa0027240 MtrunA17_Chr7g0255181 31.024 332 146 11 430 743 436 702 1.94e-30 128
Msa0027240 MtrunA17_Chr3g0080761 28.783 337 168 10 428 742 374 660 5.26e-30 126
Msa0027240 MtrunA17_Chr8g0373821 37.158 183 103 5 561 741 361 533 2.35e-28 120
Msa0027240 MtrunA17_Chr8g0354821 27.976 336 173 10 428 744 401 686 4.22e-28 120
Msa0027240 MtrunA17_Chr4g0003501 29.167 336 154 14 428 741 677 950 3.87e-27 118
Msa0027240 MtrunA17_Chr4g0003511 29.499 339 151 14 428 741 772 1047 1.48e-26 116
Msa0027240 MtrunA17_Chr5g0403241 36.413 184 108 6 561 742 1327 1503 2.37e-25 113
Msa0027240 MtrunA17_Chr4g0075321 37.234 188 101 7 561 742 884 1060 4.43e-25 112
Msa0027240 MtrunA17_Chr7g0252211 34.597 211 103 7 559 742 551 753 4.50e-25 111
Msa0027240 MtrunA17_Chr6g0476111 28.342 374 188 12 395 742 371 690 1.01e-24 110
Msa0027240 MtrunA17_Chr6g0476121 28.647 377 183 14 395 742 320 639 1.62e-24 109
Msa0027240 MtrunA17_Chr1g0170651 29.560 318 151 11 428 741 293 541 7.12e-21 97.4
Msa0027240 MtrunA17_Chr8g0368901 26.433 314 145 12 430 720 507 757 1.75e-20 96.7
Msa0027240 MtrunA17_Chr8g0368911 25.796 314 147 12 430 720 500 750 2.05e-19 93.6
Msa0027240 MtrunA17_Chr1g0163051 25.472 318 151 12 430 724 396 650 2.33e-18 89.7
Msa0027240 MtrunA17_Chr6g0460921 31.875 160 103 3 563 719 241 397 2.95e-17 85.1
Msa0027240 MtrunA17_Chr6g0467531 29.545 176 109 5 559 721 392 565 3.32e-17 85.9
Msa0027240 MtrunA17_Chr3g0125251 31.343 201 105 8 548 742 1288 1461 3.81e-17 86.7
Msa0027240 MtrunA17_Chr6g0467381 29.545 176 109 5 559 721 392 565 3.99e-17 85.5
Msa0027240 MtrunA17_Chr6g0467421 29.545 176 109 5 559 721 392 565 4.40e-17 85.5
Msa0027240 MtrunA17_Chr7g0232811 30.476 210 104 8 568 741 331 534 4.89e-17 85.1
Msa0027240 MtrunA17_Chr6g0467411 29.545 176 109 5 559 721 310 483 9.05e-17 84.0
Msa0027240 MtrunA17_Chr6g0467401 28.977 176 110 5 559 721 392 565 7.43e-16 81.6
Msa0027240 MtrunA17_Chr2g0306961 28.736 174 109 5 561 721 293 464 3.92e-15 78.6
Msa0027240 MtrunA17_Chr7g0232981 30.208 192 114 6 568 741 322 511 7.06e-15 78.2
Msa0027240 MtrunA17_Chr1g0201621 28.821 229 117 10 520 741 30 219 1.52e-12 70.5
Msa0027240 MtrunA17_Chr1g0201311 28.384 229 118 10 520 741 30 219 8.10e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027240 AT5G43990.3 40.228 788 347 21 5 749 3 709 4.97e-167 499
Msa0027240 AT5G43990.11 40.228 788 347 21 5 749 3 709 4.97e-167 499
Msa0027240 AT5G43990.1 40.228 788 347 21 5 749 3 709 4.97e-167 499
Msa0027240 AT5G43990.4 40.228 788 347 21 5 749 3 709 4.97e-167 499
Msa0027240 AT5G43990.9 40.228 788 347 21 5 749 26 732 8.73e-167 499
Msa0027240 AT5G43990.2 40.228 788 347 21 5 749 26 732 8.73e-167 499
Msa0027240 AT5G43990.16 40.337 771 350 19 5 749 3 689 3.66e-164 491
Msa0027240 AT5G43990.5 40.337 771 350 19 5 749 3 689 3.66e-164 491
Msa0027240 AT5G43990.17 40.337 771 350 19 5 749 3 689 3.66e-164 491
Msa0027240 AT5G43990.14 40.337 771 350 19 5 749 3 689 3.66e-164 491
Msa0027240 AT5G43990.15 40.337 771 350 19 5 749 26 712 5.19e-164 491
Msa0027240 AT5G43990.10 40.337 771 350 19 5 749 26 712 5.19e-164 491
Msa0027240 AT5G43990.8 39.551 713 323 19 63 749 10 640 2.40e-147 446
Msa0027240 AT5G43990.12 39.551 713 323 19 63 749 10 640 2.40e-147 446
Msa0027240 AT5G43990.6 39.551 713 323 19 63 749 10 640 2.40e-147 446
Msa0027240 AT5G43990.13 39.551 713 323 19 63 749 10 640 2.40e-147 446
Msa0027240 AT5G43990.7 39.655 696 326 17 63 749 10 620 2.04e-144 437
Msa0027240 AT3G04380.2 52.381 357 163 7 393 745 81 434 1.46e-125 383
Msa0027240 AT1G04050.3 54.441 349 149 6 406 750 281 623 2.38e-125 388
Msa0027240 AT1G04050.3 31.977 172 95 7 228 380 176 344 9.67e-12 68.9
Msa0027240 AT3G04380.3 53.314 347 155 7 403 745 102 445 2.92e-125 383
Msa0027240 AT3G04380.1 53.314 347 155 7 403 745 118 461 3.00e-125 383
Msa0027240 AT3G04380.6 52.381 357 163 7 393 745 81 434 3.40e-125 382
Msa0027240 AT3G04380.5 52.381 357 163 7 393 745 65 418 3.70e-125 381
Msa0027240 AT3G04380.4 53.314 347 155 7 403 745 118 461 4.47e-125 383
Msa0027240 AT1G04050.2 54.441 349 149 6 406 750 385 727 1.11e-124 390
Msa0027240 AT1G04050.2 31.977 172 95 7 228 380 280 448 8.45e-12 69.3
Msa0027240 AT1G04050.1 54.441 349 149 6 406 750 385 727 1.11e-124 390
Msa0027240 AT1G04050.1 31.977 172 95 7 228 380 280 448 8.45e-12 69.3
Msa0027240 AT2G23740.3 38.947 190 100 6 562 744 1200 1380 1.80e-28 123
Msa0027240 AT2G23740.6 38.947 190 100 6 562 744 1200 1380 1.80e-28 123
Msa0027240 AT2G23740.2 38.947 190 100 6 562 744 1200 1380 1.80e-28 123
Msa0027240 AT2G23740.1 38.947 190 100 6 562 744 1193 1373 1.85e-28 123
Msa0027240 AT2G35160.5 29.524 315 151 12 430 741 507 753 3.56e-27 118
Msa0027240 AT2G35160.2 29.524 315 151 12 430 741 543 789 4.35e-27 118
Msa0027240 AT2G35160.3 29.524 315 151 12 430 741 543 789 4.35e-27 118
Msa0027240 AT2G35160.1 29.524 315 151 12 430 741 543 789 4.35e-27 118
Msa0027240 AT2G35160.4 29.524 315 151 12 430 741 543 789 4.35e-27 118
Msa0027240 AT1G73100.1 30.816 331 160 13 430 742 386 665 5.02e-27 117
Msa0027240 AT2G22740.2 28.358 335 161 10 430 742 509 786 4.35e-25 112
Msa0027240 AT2G22740.1 28.358 335 161 10 430 742 509 786 4.35e-25 112
Msa0027240 AT5G04940.2 27.795 331 169 12 430 742 388 666 5.87e-24 107
Msa0027240 AT5G04940.1 27.795 331 169 12 430 742 388 666 5.87e-24 107
Msa0027240 AT3G03750.2 34.921 189 100 8 564 741 169 345 1.31e-22 100
Msa0027240 AT1G17770.1 32.836 201 117 7 558 742 491 689 4.62e-22 102
Msa0027240 AT2G23740.4 43.220 118 63 3 562 677 1200 1315 1.48e-20 97.8
Msa0027240 AT2G23740.5 43.220 118 63 3 562 677 1200 1315 1.48e-20 97.8
Msa0027240 AT4G13460.1 27.108 332 160 16 421 731 378 648 7.62e-20 94.7
Msa0027240 AT4G13460.2 27.108 332 160 16 421 731 378 648 7.62e-20 94.7
Msa0027240 AT2G33290.1 25.806 310 153 11 430 720 388 639 1.15e-16 84.7
Msa0027240 AT2G33290.3 25.806 310 153 11 430 720 388 639 1.15e-16 84.7
Msa0027240 AT2G33290.4 25.806 310 153 11 430 720 388 639 1.15e-16 84.7
Msa0027240 AT2G33290.2 25.806 310 153 11 430 720 388 639 1.15e-16 84.7
Msa0027240 AT2G24740.1 31.053 190 109 7 571 742 566 751 1.88e-15 81.3
Msa0027240 AT1G77300.1 28.311 219 111 10 535 742 980 1163 1.17e-14 79.0
Msa0027240 AT1G77300.2 28.311 219 111 10 535 742 980 1163 1.72e-14 78.6
Msa0027240 AT3G03750.1 29.474 190 93 7 564 741 169 329 7.60e-14 73.9
Msa0027240 AT1G76710.2 29.050 179 95 7 569 741 72 224 1.54e-13 74.3
Msa0027240 AT1G76710.1 29.050 179 95 7 569 741 72 224 1.54e-13 74.3
Msa0027240 AT1G76710.4 29.050 179 95 7 569 741 72 224 1.81e-13 73.9
Msa0027240 AT1G76710.3 29.050 179 95 7 569 741 72 224 2.00e-13 73.9

Find 200 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGCGCTGCTATGTTTC+TGG 0.156141 1_1:-51505662 None:intergenic
CCTCTCATGCAACTCTTTAA+TGG 0.157207 1_1:-51504275 None:intergenic
AGTTACTTTGTATAGCTTTA+TGG 0.167226 1_1:+51506578 Msa0027240:three_prime_UTR
AAATGAATTAACCTTCATTT+TGG 0.184016 1_1:+51506632 Msa0027240:three_prime_UTR
CTATGTTTCTGGTGGTAAAA+AGG 0.216526 1_1:-51505651 None:intergenic
ACTACTAAACTGAGTGAATT+TGG 0.220484 1_1:-51502915 None:intergenic
AGAGAACTATAGAGCTTTAT+TGG 0.221245 1_1:+51501010 Msa0027240:CDS
TCATCAACGGGCTCAGATTT+AGG 0.222684 1_1:-51501586 None:intergenic
ACATTTCTCTATCTCGTATT+GGG 0.243654 1_1:+51503114 Msa0027240:CDS
AACATGAAATGTGCTGAAAA+TGG 0.265651 1_1:+51504298 Msa0027240:CDS
TACTTCAGGGATGCATGTTT+TGG 0.274703 1_1:+51506516 Msa0027240:three_prime_UTR
GTTACTTTGTATAGCTTTAT+GGG 0.292742 1_1:+51506579 Msa0027240:three_prime_UTR
AACAGTTCACTGATTATAAA+TGG 0.304069 1_1:+51500854 Msa0027240:exon
TCTGGACACTCAATCTGAAT+TGG 0.318800 1_1:-51505491 None:intergenic
CCACTTCTTTACGTGTGTTA+TGG 0.320200 1_1:-51502374 None:intergenic
CTGCAGGCAATGACAGAGTT+TGG 0.324033 1_1:+51500909 Msa0027240:CDS
TTGTAGTTTGATCTTTAGTT+TGG 0.329645 1_1:+51506669 Msa0027240:three_prime_UTR
GAATAGCGCCTTAAGCTTGA+TGG 0.331994 1_1:-51502294 None:intergenic
CTCTGATGGGCTGGTGAAAA+GGG 0.332393 1_1:-51502798 None:intergenic
AACATTTCTCTATCTCGTAT+TGG 0.338243 1_1:+51503113 Msa0027240:CDS
TGTGCCTGTACATATAAAAC+TGG 0.340913 1_1:+51503191 Msa0027240:CDS
TTGAAAAGATTGAGATTAAG+AGG 0.343197 1_1:+51501346 Msa0027240:CDS
CATCTCGGAACACAAGGTTT+TGG 0.345064 1_1:-51503082 None:intergenic
TTGATGGCACACCCGCCATT+GGG 0.345576 1_1:+51502688 Msa0027240:CDS
CTCTTCAAGTGTCCTTTACA+TGG 0.346446 1_1:-51503359 None:intergenic
ACAGTTTGACAGGTTGATTA+TGG 0.349473 1_1:-51506057 None:intergenic
TACAGCTCAAGGCCTAATTA+AGG 0.350606 1_1:+51503229 Msa0027240:CDS
TGTTCTACTGGATGCGGCTT+GGG 0.352177 1_1:+51504336 Msa0027240:CDS
AACAAGACCCAGCTTACTTC+AGG 0.353126 1_1:+51506502 Msa0027240:three_prime_UTR
ATAGCTTTATGGGAAGTATT+AGG 0.354795 1_1:+51506589 Msa0027240:three_prime_UTR
ACTTGGTCTGCGTTAATTGC+TGG 0.356521 1_1:+51506420 Msa0027240:CDS
GAGCTGCAGCTCAGCTCTCC+AGG 0.359083 1_1:+51502449 Msa0027240:CDS
GTCAAAGAGTGATGGTTGTT+TGG 0.362693 1_1:+51503334 Msa0027240:CDS
GAAAGTTTATTAAAGAATGT+TGG 0.367343 1_1:+51503381 Msa0027240:CDS
TGCTTAGATGCAGCGTCCTT+TGG 0.374054 1_1:+51504391 Msa0027240:CDS
TGAGTAGGCATGCGGAAATC+TGG 0.394448 1_1:-51502474 None:intergenic
TTGTGGTCTCACCCAGGTCC+TGG 0.394751 1_1:+51506470 Msa0027240:three_prime_UTR
GCTCTGATGGGCTGGTGAAA+AGG 0.396124 1_1:-51502799 None:intergenic
ACCAGCCCATCAGAGCAGTT+TGG 0.397557 1_1:+51502806 Msa0027240:CDS
GATGACACTGCGTTGTTTCG+AGG 0.400594 1_1:-51501463 None:intergenic
TGCAGGCAATGACAGAGTTT+GGG 0.400977 1_1:+51500910 Msa0027240:CDS
CAGATGTTCTGATGCAAACT+TGG 0.408144 1_1:+51505460 Msa0027240:intron
GAGAGGAACGAGGAGGTTTG+AGG 0.408593 1_1:-51499955 None:intergenic
ATCTACTTACCCTGTTCTAC+TGG 0.409720 1_1:+51504324 Msa0027240:CDS
AAGAGAATAATCAAATTTCA+TGG 0.413531 1_1:+51503009 Msa0027240:CDS
GCATTTGTGTGTGAGTTTGC+TGG 0.417110 1_1:+51504241 Msa0027240:CDS
CAGCGCATGAAGAGCTCACT+TGG 0.418578 1_1:+51505674 Msa0027240:CDS
CAAGCCGCATCCAGTAGAAC+AGG 0.419068 1_1:-51504334 None:intergenic
TCACACACAAATGCTCCTTT+TGG 0.419691 1_1:-51504232 None:intergenic
CTGGACACTCAATCTGAATT+GGG 0.423030 1_1:-51505490 None:intergenic
TGGAATAACATACAACTTGC+AGG 0.432287 1_1:+51503451 Msa0027240:CDS
AGTCTACAGAAGATCGTATA+AGG 0.434173 1_1:+51502952 Msa0027240:CDS
TCCTGAAGCAAAAGTGAAAC+GGG 0.434933 1_1:+51500935 Msa0027240:CDS
CATCATCCAAACTGCTCTGA+TGG 0.438786 1_1:-51502812 None:intergenic
ATGGGGACTTCGTACCTTAG+AGG 0.440946 1_1:+51504204 Msa0027240:CDS
GTTGATGGCACACCCGCCAT+TGG 0.441443 1_1:+51502687 Msa0027240:CDS
ATGCAGAACCATCAAGCTTA+AGG 0.443752 1_1:+51502286 Msa0027240:intron
CAAGCTTAAGGCGCTATTCA+AGG 0.444240 1_1:+51502298 Msa0027240:CDS
ACCTGGGTGAGACCACAAAA+TGG 0.445762 1_1:-51506465 None:intergenic
AACATTTAACGGAGCTTCCT+CGG 0.446061 1_1:-51501308 None:intergenic
TCCAAACTGCTCTGATGGGC+TGG 0.448015 1_1:-51502807 None:intergenic
CAGTTTGGATGATGCTGTAC+TGG 0.448999 1_1:+51502821 Msa0027240:CDS
GAGGACAGTTGTTCCTGTAT+AGG 0.451056 1_1:+51503140 Msa0027240:CDS
ACGGGTTCTCACTCATCAAA+TGG 0.451201 1_1:+51502729 Msa0027240:CDS
TCATAATCTTCCTCATCAAC+GGG 0.455912 1_1:-51501598 None:intergenic
TGGGAGCTTATTACCGTTGG+CGG 0.456705 1_1:+51506546 Msa0027240:three_prime_UTR
CAAACTCTGTCATTGCCTGC+AGG 0.457013 1_1:-51500908 None:intergenic
CTATGTGAGACTTCTTCAAC+GGG 0.457238 1_1:-51501402 None:intergenic
CTGTTCTACTGGATGCGGCT+TGG 0.459130 1_1:+51504335 Msa0027240:CDS
CAGTAAAAGCAATGCTGTTG+AGG 0.466634 1_1:-51503290 None:intergenic
ACATGATAGTAGTAATGATC+TGG 0.467187 1_1:-51505509 None:intergenic
TTGGATGCTATATTTGAAGA+AGG 0.467640 1_1:+51501029 Msa0027240:CDS
CATGCATCCCTGAAGTAAGC+TGG 0.473584 1_1:-51506510 None:intergenic
CAAGATGCAACTTCCTATAC+AGG 0.475226 1_1:-51503153 None:intergenic
GGAAGAAGAGATGGAGGCCG+AGG 0.476544 1_1:+51501291 Msa0027240:intron
TGGGGTATGTAGTTGAAAGG+TGG 0.478541 1_1:-51503062 None:intergenic
TTTGGAGACACGGGATCCTC+CGG 0.478825 1_1:-51502897 None:intergenic
TGTGATAGCCTCTTCAGCTC+AGG 0.484761 1_1:+51502407 Msa0027240:CDS
AGAACAACTTCTAAAGATGA+TGG 0.485289 1_1:+51502497 Msa0027240:CDS
TTGCACTGAAACAGTTTGAC+AGG 0.487466 1_1:-51506067 None:intergenic
CGAGCAGATTCAACATTTAA+CGG 0.488022 1_1:-51501319 None:intergenic
AAATGGACCTAGGTTAGAAT+CGG 0.489823 1_1:-51500227 None:intergenic
TTTAGAAGTTGTTCTTGAGT+AGG 0.492209 1_1:-51502489 None:intergenic
ACGGGGAAGAAGCTGAGCTA+GGG 0.492408 1_1:-51501384 None:intergenic
GTTACGACTCATCCAGGACC+TGG 0.498647 1_1:-51506482 None:intergenic
TACTTCTCCCTGAGCTGAAG+AGG 0.498970 1_1:-51502415 None:intergenic
GGCAGTAAGGATTTGGACAC+GGG 0.499376 1_1:+51502711 Msa0027240:CDS
GAAGAAGTCTCACATAGAAA+AGG 0.499568 1_1:+51501408 Msa0027240:CDS
TTCCTGAAGCAAAAGTGAAA+CGG 0.501547 1_1:+51500934 Msa0027240:CDS
AGTTAGTTACATATACTTAA+CGG 0.502260 1_1:-51506696 None:intergenic
GATGTTAGTGACCTTACAAA+AGG 0.503486 1_1:+51502984 Msa0027240:CDS
TGCGAGATGCTAGTTATGAC+AGG 0.503811 1_1:+51501518 Msa0027240:CDS
AGCTGCAGCTCAGCTCTCCA+GGG 0.513352 1_1:+51502450 Msa0027240:CDS
ATCAATTGTTCTGTTCATCT+CGG 0.513406 1_1:-51502847 None:intergenic
ACATGAAATGTGCTGAAAAT+GGG 0.514519 1_1:+51504299 Msa0027240:CDS
CTCATAATCTTCCTCATCAA+CGG 0.516381 1_1:-51501599 None:intergenic
GAAAAGGACACAGCACTTGA+AGG 0.519631 1_1:+51501424 Msa0027240:CDS
TCTATCTCGTATTGGGGCTG+AGG 0.521876 1_1:+51503121 Msa0027240:CDS
TTGCTAGATTTATCAATCAC+AGG 0.526124 1_1:+51504419 Msa0027240:CDS
TCACTCTTTGACCTTTCAAG+TGG 0.526254 1_1:-51503323 None:intergenic
AAACTCTGTCATTGCCTGCA+GGG 0.528224 1_1:-51500907 None:intergenic
CACATCCGAAGGAAAAGGAT+GGG 0.533153 1_1:+51504186 Msa0027240:CDS
AATGTGGCAGTAAGTTCTGC+AGG 0.533366 1_1:+51506089 Msa0027240:CDS
TTACCCTGTTCTACTGGATG+CGG 0.536254 1_1:+51504330 Msa0027240:CDS
ATCATCCAAACTGCTCTGAT+GGG 0.536390 1_1:-51502811 None:intergenic
AACGGGGAAGAAGCTGAGCT+AGG 0.536976 1_1:-51501385 None:intergenic
GATGGCACACCCGCCATTGG+GGG 0.541125 1_1:+51502690 Msa0027240:CDS
GCAAAGATTGTCCACTTGAA+AGG 0.541466 1_1:+51503312 Msa0027240:CDS
TAAGAAGCATGTGGTGATGC+AGG 0.543204 1_1:-51501550 None:intergenic
ACAAGACCCAGCTTACTTCA+GGG 0.545057 1_1:+51506503 Msa0027240:three_prime_UTR
TGCATTCTAACATCACTTTG+TGG 0.547428 1_1:-51502873 None:intergenic
CAGAAGCATCTCGGAACACA+AGG 0.547625 1_1:-51503088 None:intergenic
TTACGTGTGTTATGGTGTGA+TGG 0.548330 1_1:-51502366 None:intergenic
GCATGCGGAAATCTGGTCCC+TGG 0.548829 1_1:-51502467 None:intergenic
CATTTCTCTATCTCGTATTG+GGG 0.549601 1_1:+51503115 Msa0027240:CDS
TCACATCCGAAGGAAAAGGA+TGG 0.551509 1_1:+51504185 Msa0027240:CDS
TCTATGTGAGACTTCTTCAA+CGG 0.553756 1_1:-51501403 None:intergenic
TTGGGATTCAACATTTGTGA+AGG 0.553918 1_1:+51504354 Msa0027240:CDS
TCTTCTTCCGATTCTAACCT+AGG 0.555001 1_1:+51500220 Msa0027240:five_prime_UTR
AGGCGCTATTCAAGGAAGAA+TGG 0.557745 1_1:+51502306 Msa0027240:CDS
ATGCATCCCTGAAGTAAGCT+GGG 0.559909 1_1:-51506509 None:intergenic
CCATTAAAGAGTTGCATGAG+AGG 0.561929 1_1:+51504275 Msa0027240:CDS
TGAGCGGCGTCCCCTTGCAA+TGG 0.562017 1_1:+51501618 Msa0027240:CDS
ATCAAGCATAGATGTGTCAA+AGG 0.563277 1_1:+51502656 Msa0027240:CDS
TTAACGAAGGACCAAAATGA+AGG 0.563649 1_1:-51506643 None:intergenic
GGTATGTAGTTGAAAGGTGG+TGG 0.563966 1_1:-51503059 None:intergenic
GTTATGGTGTGATGGTGTCA+TGG 0.564381 1_1:-51502358 None:intergenic
TCAAAGGAATCAGAGGTTGA+TGG 0.565059 1_1:+51502672 Msa0027240:CDS
AAGTGATGTTAGAATGCAGC+CGG 0.565115 1_1:+51502878 Msa0027240:CDS
TTATACGATCTTCTGTAGAC+TGG 0.565319 1_1:-51502950 None:intergenic
GGTCTTGTTACGACTCATCC+AGG 0.566145 1_1:-51506488 None:intergenic
ATATAACCAGGAAGAAGAGA+TGG 0.566148 1_1:+51501282 Msa0027240:intron
AACTATAGCTCAACCGCCAA+CGG 0.566548 1_1:-51506559 None:intergenic
AGAGAATAATCAAATTTCAT+GGG 0.566667 1_1:+51503010 Msa0027240:CDS
AGTAAAAGCAATGCTGTTGA+GGG 0.566678 1_1:-51503289 None:intergenic
AGCAATTAACGCAGACCAAG+TGG 0.567774 1_1:-51506418 None:intergenic
GTGATGGTGTCATGGAGACA+TGG 0.568469 1_1:-51502350 None:intergenic
ACCTTAGAGGAACTGCCAAA+AGG 0.569461 1_1:+51504217 Msa0027240:CDS
TGTTGGAGCAAATGTGGCTG+TGG 0.569633 1_1:+51503398 Msa0027240:CDS
GTGCCTGTACATATAAAACT+GGG 0.569930 1_1:+51503192 Msa0027240:CDS
AAATTTGCATATACAGCTCA+AGG 0.570666 1_1:+51503218 Msa0027240:CDS
TGATGGCACACCCGCCATTG+GGG 0.571000 1_1:+51502689 Msa0027240:CDS
CAGTGTCATCTGATGTGAAT+GGG 0.571710 1_1:+51501476 Msa0027240:CDS
TCTGCCTTGGTTTCACCTCG+AGG 0.574171 1_1:+51502774 Msa0027240:CDS
TAAATCTGAGCCCGTTGATG+AGG 0.579697 1_1:+51501588 Msa0027240:CDS
TCTGATGGGCTGGTGAAAAG+GGG 0.580258 1_1:-51502797 None:intergenic
CCATAACACACGTAAAGAAG+TGG 0.582122 1_1:+51502374 Msa0027240:CDS
AAATGTTAACAGAAGCATCT+CGG 0.583016 1_1:-51503097 None:intergenic
AGACTGAGAATGAGAGTGAG+AGG 0.585397 1_1:-51499972 None:intergenic
CTGAGTGAATTTGGAGACAC+GGG 0.587085 1_1:-51502906 None:intergenic
GTGATAGCCTCTTCAGCTCA+GGG 0.595212 1_1:+51502408 Msa0027240:CDS
AAATCTAGCAATGTTGCCAA+AGG 0.600969 1_1:-51504407 None:intergenic
ATGAAGCAATGTTGTGAGCG+AGG 0.608431 1_1:-51500183 None:intergenic
GTCATAACTAGCATCTCGCA+TGG 0.608733 1_1:-51501515 None:intergenic
AGATATATGTGATTGCATGT+TGG 0.610959 1_1:+51502584 Msa0027240:CDS
AGATGTGTCAAAGGAATCAG+AGG 0.611371 1_1:+51502665 Msa0027240:CDS
CGGGGAAGAAGCTGAGCTAG+GGG 0.611782 1_1:-51501383 None:intergenic
TCAAACGATAACTCACAAGA+AGG 0.613211 1_1:+51502621 Msa0027240:CDS
CTTGAAAGGTCAAAGAGTGA+TGG 0.617940 1_1:+51503326 Msa0027240:CDS
GCAGTGTCATCTGATGTGAA+TGG 0.620539 1_1:+51501475 Msa0027240:CDS
TCATAACTAGCATCTCGCAT+GGG 0.621862 1_1:-51501514 None:intergenic
ACATCCGAAGGAAAAGGATG+GGG 0.623345 1_1:+51504187 Msa0027240:CDS
GGTTGTTTGGAACCATGTAA+AGG 0.624624 1_1:+51503347 Msa0027240:CDS
GGGCAGTAAGGATTTGGACA+CGG 0.626593 1_1:+51502710 Msa0027240:CDS
GCTGGTGAAAAGGGGCCTCG+AGG 0.629263 1_1:-51502789 None:intergenic
AGTTGTATGTTATTCCACGC+TGG 0.629403 1_1:-51503445 None:intergenic
AAAGAATGTTGGAGCAAATG+TGG 0.629844 1_1:+51503392 Msa0027240:CDS
GCGAGATGCTAGTTATGACA+GGG 0.630984 1_1:+51501519 Msa0027240:CDS
ATGCGCTGCTATGTTTCTGG+TGG 0.632146 1_1:-51505659 None:intergenic
AACGGGCTCAGATTTAGGTA+CGG 0.633960 1_1:-51501581 None:intergenic
TCTTCTGTAGACTGGTGATG+TGG 0.636889 1_1:-51502942 None:intergenic
TTACGACTCATCCAGGACCT+GGG 0.638285 1_1:-51506481 None:intergenic
ACTGATTATAAATGGCGCCA+AGG 0.643115 1_1:+51500862 Msa0027240:exon
TGAGAGTGAGAGGAACGAGG+AGG 0.643164 1_1:-51499962 None:intergenic
GTTGTTCTTGAGTAGGCATG+CGG 0.647576 1_1:-51502482 None:intergenic
AGCGCATGAAGAGCTCACTT+GGG 0.648600 1_1:+51505675 Msa0027240:CDS
AATGGTGTTACTGAAAAGCA+AGG 0.651736 1_1:+51502324 Msa0027240:CDS
TGTCATCTGATGTGAATGGG+AGG 0.652442 1_1:+51501479 Msa0027240:CDS
GAATGAGAGTGAGAGGAACG+AGG 0.653486 1_1:-51499965 None:intergenic
TGATGGTGTCATGGAGACAT+GGG 0.657309 1_1:-51502349 None:intergenic
ACTGAGTGAATTTGGAGACA+CGG 0.658366 1_1:-51502907 None:intergenic
GTCAATTCATAAGAAGCATG+TGG 0.660777 1_1:-51501559 None:intergenic
ACAACTTCTAAAGATGATGG+AGG 0.666072 1_1:+51502500 Msa0027240:CDS
GCCTGTACATATAAAACTGG+GGG 0.669381 1_1:+51503194 Msa0027240:CDS
TAACCAGGAAGAAGAGATGG+AGG 0.670725 1_1:+51501285 Msa0027240:intron
GTTGGAGCAAATGTGGCTGT+GGG 0.672821 1_1:+51503399 Msa0027240:CDS
TGCCTGTACATATAAAACTG+GGG 0.672868 1_1:+51503193 Msa0027240:CDS
TGATGTTAGAATGCAGCCGG+AGG 0.679721 1_1:+51502881 Msa0027240:CDS
CAAACTACAAATATTAACGA+AGG 0.681223 1_1:-51506656 None:intergenic
TGTGGCTGTGGGAAACAATG+TGG 0.681976 1_1:+51503410 Msa0027240:CDS
GTCATCTGATGTGAATGGGA+GGG 0.682522 1_1:+51501480 Msa0027240:CDS
CTTCAGTCAGTTGAAAACCC+AGG 0.693638 1_1:+51500033 Msa0027240:five_prime_UTR
AAGGACACAGCACTTGAAGG+CGG 0.696062 1_1:+51501427 Msa0027240:CDS
GGAAATCGCGTTATCCAGCG+TGG 0.696912 1_1:+51503431 Msa0027240:CDS
AAACTGTTTCAGTGCAAATG+TGG 0.701775 1_1:+51506073 Msa0027240:CDS
AAGCCGCATCCAGTAGAACA+GGG 0.704391 1_1:-51504333 None:intergenic
GGGGCCTCGAGGTGAAACCA+AGG 0.711820 1_1:-51502778 None:intergenic
CGAGATGCTAGTTATGACAG+GGG 0.714402 1_1:+51501520 Msa0027240:CDS
TTGATGAGGAAGATTATGAG+CGG 0.719615 1_1:+51501602 Msa0027240:CDS
TATGTGAGACTTCTTCAACG+GGG 0.806237 1_1:-51501401 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTTTTTTAAAAAAAAAG+TGG + chr1_1:51500561-51500580 Msa0027240:intron 10.0%
!! TAAAAATTATGAATCAATAT+TGG - chr1_1:51503523-51503542 None:intergenic 10.0%
!!! TAATAAGATAATAATTTTTC+GGG + chr1_1:51503728-51503747 Msa0027240:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG - chr1_1:51503776-51503795 None:intergenic 10.0%
!!! TTATTAATTTATGATTTTCT+TGG - chr1_1:51503777-51503796 None:intergenic 10.0%
!! GTATGTATTTATAATATTAT+AGG + chr1_1:51504794-51504813 Msa0027240:intron 10.0%
!! TTAAAATAATTGGTATTAAA+TGG - chr1_1:51505062-51505081 None:intergenic 10.0%
!! ATTTCAAGAATATAAAGATT+AGG + chr1_1:51500489-51500508 Msa0027240:intron 15.0%
!! TTTCAAGAATATAAAGATTA+GGG + chr1_1:51500490-51500509 Msa0027240:intron 15.0%
!!! GTTTAATTTATTTTCTTAAC+CGG + chr1_1:51500643-51500662 Msa0027240:intron 15.0%
!! ATGTTGAAAAAGAAAATAAT+TGG - chr1_1:51502191-51502210 None:intergenic 15.0%
!!! AAACTCTTTAATTTAATACT+CGG + chr1_1:51503624-51503643 Msa0027240:intron 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG - chr1_1:51503700-51503719 None:intergenic 15.0%
!!! AAACATTTTAAAAATGTACT+GGG - chr1_1:51504133-51504152 None:intergenic 15.0%
!!! AAAACATTTTAAAAATGTAC+TGG - chr1_1:51504134-51504153 None:intergenic 15.0%
!!! ATTTTTTTTCTGAATATCAA+TGG - chr1_1:51504572-51504591 None:intergenic 15.0%
!! ATTGATATTCAGAAAAAAAA+TGG + chr1_1:51504571-51504590 Msa0027240:intron 15.0%
!! TAGAAAAAAAAGAAGATATT+TGG + chr1_1:51504749-51504768 Msa0027240:intron 15.0%
!!! AAAAAAAATTCTTTTCTCTT+CGG - chr1_1:51504897-51504916 None:intergenic 15.0%
!!! AAAATTTTATACAATATAGG+AGG - chr1_1:51505754-51505773 None:intergenic 15.0%
!!! GTGAAAATTTTATACAATAT+AGG - chr1_1:51505757-51505776 None:intergenic 15.0%
!!! ATAAAATTTTCACTTCTTTA+TGG + chr1_1:51505764-51505783 Msa0027240:intron 15.0%
!! AGATTAATGTGAAATGAAAA+GGG - chr1_1:51500093-51500112 None:intergenic 20.0%
!! TAGATTAATGTGAAATGAAA+AGG - chr1_1:51500094-51500113 None:intergenic 20.0%
!! ATAAACAACAGTACATAAAT+GGG - chr1_1:51500458-51500477 None:intergenic 20.0%
!! AATAAACAACAGTACATAAA+TGG - chr1_1:51500459-51500478 None:intergenic 20.0%
!! TGGTGTATTTATTTATATCT+TGG + chr1_1:51500781-51500800 Msa0027240:intron 20.0%
!! ATTTATATCTTGGAAATCTT+TGG + chr1_1:51500791-51500810 Msa0027240:intron 20.0%
!!! AGTTTTTATCAAACAACTTA+AGG - chr1_1:51500974-51500993 None:intergenic 20.0%
!!! TTAAGTTGTTTGATAAAAAC+TGG + chr1_1:51500973-51500992 Msa0027240:CDS 20.0%
!!! TAACATTCATAATTTTCTGT+TGG + chr1_1:51501194-51501213 Msa0027240:intron 20.0%
!! AAGAGAATAATCAAATTTCA+TGG + chr1_1:51503009-51503028 Msa0027240:CDS 20.0%
!! AGAGAATAATCAAATTTCAT+GGG + chr1_1:51503010-51503029 Msa0027240:CDS 20.0%
!! GAAAGTTTATTAAAGAATGT+TGG + chr1_1:51503381-51503400 Msa0027240:CDS 20.0%
!! AAAATGTATTTGTTTACTAG+TGG - chr1_1:51503498-51503517 None:intergenic 20.0%
!! TCTAAATCAATAAATTTCTC+CGG + chr1_1:51504061-51504080 Msa0027240:intron 20.0%
!! CTCTATAAATTAATAATGTC+AGG - chr1_1:51504088-51504107 None:intergenic 20.0%
!!! AACATTTTAAAAATGTACTG+GGG - chr1_1:51504132-51504151 None:intergenic 20.0%
!! GTTCAAACGATTAAAATAAT+TGG - chr1_1:51505072-51505091 None:intergenic 20.0%
!!! TGAATGTTTTTTGGTTATTT+AGG + chr1_1:51505410-51505429 Msa0027240:intron 20.0%
!!! GTAAGTTTTGTTATGTAATA+TGG + chr1_1:51505697-51505716 Msa0027240:intron 20.0%
!!! ACTTATTTTCTAGTTTTTCA+TGG + chr1_1:51505864-51505883 Msa0027240:intron 20.0%
!!! TATTTTTATTTTGTTTCTGC+AGG + chr1_1:51506012-51506031 Msa0027240:intron 20.0%
!!! GTTAATTCATTTGTCTTTTT+TGG - chr1_1:51506624-51506643 None:intergenic 20.0%
!!! AAATGAATTAACCTTCATTT+TGG + chr1_1:51506632-51506651 Msa0027240:three_prime_UTR 20.0%
!! AGTTAGTTACATATACTTAA+CGG - chr1_1:51506699-51506718 None:intergenic 20.0%
! GGTTTGAGGAAAAATAAATA+GGG - chr1_1:51499944-51499963 None:intergenic 25.0%
! AGGTTTGAGGAAAAATAAAT+AGG - chr1_1:51499945-51499964 None:intergenic 25.0%
! AAAGAAAGAGTGAAAAGAAA+TGG - chr1_1:51500247-51500266 None:intergenic 25.0%
!!! TGTATTGCACTTTTTTTTTG+TGG + chr1_1:51500287-51500306 Msa0027240:intron 25.0%
!!! CACTTTTTTTTTGTGGTTTT+GGG + chr1_1:51500294-51500313 Msa0027240:intron 25.0%
!!! ATGGGTTAAGCTTTAAAAAA+GGG - chr1_1:51500440-51500459 None:intergenic 25.0%
!!! AATGGGTTAAGCTTTAAAAA+AGG - chr1_1:51500441-51500460 None:intergenic 25.0%
!!! TACTGTTGTTTATTTTCTCA+TGG + chr1_1:51500465-51500484 Msa0027240:intron 25.0%
!!! AGTTTTCACTTTGAAATGTT+AGG + chr1_1:51500691-51500710 Msa0027240:intron 25.0%
! TGTTAGTAGAAGAATGTTTA+TGG + chr1_1:51500761-51500780 Msa0027240:intron 25.0%
!!! TTGGAAATCTTTGGAATTAA+GGG + chr1_1:51500800-51500819 Msa0027240:intron 25.0%
!!! AATTAAGGGTGTTTTTCATT+TGG + chr1_1:51500814-51500833 Msa0027240:intron 25.0%
!!! ATTAAGGGTGTTTTTCATTT+GGG + chr1_1:51500815-51500834 Msa0027240:intron 25.0%
!! AACAGTTCACTGATTATAAA+TGG + chr1_1:51500854-51500873 Msa0027240:exon 25.0%
!!! ATTGTTGGATTTTATTTGAC+AGG + chr1_1:51501131-51501150 Msa0027240:intron 25.0%
!! CTTAATCTCAATCTTTTCAA+AGG - chr1_1:51501346-51501365 None:intergenic 25.0%
! TTGAAAAGATTGAGATTAAG+AGG + chr1_1:51501346-51501365 Msa0027240:CDS 25.0%
! TTTGACATCTTAGTTGTAAT+TGG + chr1_1:51501689-51501708 Msa0027240:intron 25.0%
!! TTATTCTTCTTTTCAAACCA+TGG + chr1_1:51501770-51501789 Msa0027240:intron 25.0%
! AGAAACTCATAAATCAGTAA+AGG - chr1_1:51502093-51502112 None:intergenic 25.0%
!! TTTTTCCGACAGAAAAATTT+GGG - chr1_1:51502557-51502576 None:intergenic 25.0%
!! ATTTTTCCGACAGAAAAATT+TGG - chr1_1:51502558-51502577 None:intergenic 25.0%
! CCAAAAATTCTTCCTTAATT+AGG - chr1_1:51503244-51503263 None:intergenic 25.0%
!! CCTAATTAAGGAAGAATTTT+TGG + chr1_1:51503241-51503260 Msa0027240:CDS 25.0%
! GTATAGTAAATGTAAACAAG+AGG - chr1_1:51503850-51503869 None:intergenic 25.0%
! ACTGTACATATCAAACAAAA+AGG - chr1_1:51503981-51504000 None:intergenic 25.0%
! TAAATTAATAATGTCAGGAC+CGG - chr1_1:51504083-51504102 None:intergenic 25.0%
! GATATTCAGAAAAAAAATGG+AGG + chr1_1:51504574-51504593 Msa0027240:intron 25.0%
!! AAAAGTGCAAACAAGTAATA+GGG - chr1_1:51504612-51504631 None:intergenic 25.0%
! TAATATGAGATTACCAACAT+AGG + chr1_1:51504681-51504700 Msa0027240:intron 25.0%
! AAAAAAAGAAGATATTTGGC+TGG + chr1_1:51504753-51504772 Msa0027240:intron 25.0%
! AAAAAAGAAGATATTTGGCT+GGG + chr1_1:51504754-51504773 Msa0027240:intron 25.0%
! AAAATAGCTTGAGTTTAATG+TGG + chr1_1:51504824-51504843 Msa0027240:intron 25.0%
! TTACAATGTTCAAAATGAGT+CGG + chr1_1:51504971-51504990 Msa0027240:intron 25.0%
! AAGGATATTTAAACAGTTTG+GGG - chr1_1:51505120-51505139 None:intergenic 25.0%
! CAAGGATATTTAAACAGTTT+GGG - chr1_1:51505121-51505140 None:intergenic 25.0%
! TCAAGGATATTTAAACAGTT+TGG - chr1_1:51505122-51505141 None:intergenic 25.0%
! TATTCCCATCTTTATAAAAC+TGG + chr1_1:51505192-51505211 Msa0027240:intron 25.0%
! ATTCCCATCTTTATAAAACT+GGG + chr1_1:51505193-51505212 Msa0027240:intron 25.0%
!!! GCAAATGTTTGAATGTTTTT+TGG + chr1_1:51505401-51505420 Msa0027240:intron 25.0%
!! TTGTAAAACATCAAAAGCAT+TGG - chr1_1:51505619-51505638 None:intergenic 25.0%
! CAGTTGGGATAATTTATTTA+TGG + chr1_1:51505837-51505856 Msa0027240:intron 25.0%
! CTCAGTATAATCTTACTAAA+TGG - chr1_1:51505934-51505953 None:intergenic 25.0%
! CATTTAGTAAGATTATACTG+AGG + chr1_1:51505932-51505951 Msa0027240:intron 25.0%
! AGTAAACTACAAAAATGAAC+AGG - chr1_1:51505962-51505981 None:intergenic 25.0%
! AGCAAAAGATTAAGTAAAAC+AGG - chr1_1:51506156-51506175 None:intergenic 25.0%
!! TGTTTTACTTAATCTTTTGC+TGG + chr1_1:51506155-51506174 Msa0027240:intron 25.0%
! GCATTATTAAACAATCCAAA+AGG - chr1_1:51506281-51506300 None:intergenic 25.0%
!! TAATTTTACTCTTTTGATGC+AGG + chr1_1:51506393-51506412 Msa0027240:intron 25.0%
!!! ATGCATGTTTTGGTTTTTTT+TGG + chr1_1:51506526-51506545 Msa0027240:three_prime_UTR 25.0%
!!! TGCATGTTTTGGTTTTTTTT+GGG + chr1_1:51506527-51506546 Msa0027240:three_prime_UTR 25.0%
!! AGTTACTTTGTATAGCTTTA+TGG + chr1_1:51506578-51506597 Msa0027240:three_prime_UTR 25.0%
!!! GTTACTTTGTATAGCTTTAT+GGG + chr1_1:51506579-51506598 Msa0027240:three_prime_UTR 25.0%
! CAAACTACAAATATTAACGA+AGG - chr1_1:51506659-51506678 None:intergenic 25.0%
! TTGTAGTTTGATCTTTAGTT+TGG + chr1_1:51506669-51506688 Msa0027240:three_prime_UTR 25.0%
!! AAAGAGTGTTGAAGATGAAA+GGG - chr1_1:51500067-51500086 None:intergenic 30.0%
!! AAAAGAGTGTTGAAGATGAA+AGG - chr1_1:51500068-51500087 None:intergenic 30.0%
TACACAAAAATTCACAGTCT+AGG - chr1_1:51500271-51500290 None:intergenic 30.0%
!!! GCACTTTTTTTTTGTGGTTT+TGG + chr1_1:51500293-51500312 Msa0027240:intron 30.0%
AAAAACAAAAACCAAGACAC+CGG - chr1_1:51500665-51500684 None:intergenic 30.0%
!! CTTGGAAATCTTTGGAATTA+AGG + chr1_1:51500799-51500818 Msa0027240:intron 30.0%
! AGAGAACTATAGAGCTTTAT+TGG + chr1_1:51501010-51501029 Msa0027240:CDS 30.0%
TTGGATGCTATATTTGAAGA+AGG + chr1_1:51501029-51501048 Msa0027240:CDS 30.0%
TGCAAACTTACTTCTATTGT+TGG + chr1_1:51501116-51501135 Msa0027240:intron 30.0%
!! TTGTTTTTCTTTTGTGGTTC+TGG - chr1_1:51501159-51501178 None:intergenic 30.0%
!!! ACTCTCTTGTTTTTCTTTTG+TGG - chr1_1:51501165-51501184 None:intergenic 30.0%
! TTCTGCATTTTCATATAACC+AGG + chr1_1:51501270-51501289 Msa0027240:intron 30.0%
TTAGTTGTAATTGGCATGTT+TGG + chr1_1:51501698-51501717 Msa0027240:intron 30.0%
AACATGATGCAATTATGCAA+TGG - chr1_1:51501998-51502017 None:intergenic 30.0%
TGCATAAGATACTCTATGTT+AGG + chr1_1:51502121-51502140 Msa0027240:intron 30.0%
AAATAATTGGTCAGATTCAG+AGG - chr1_1:51502178-51502197 None:intergenic 30.0%
TTTAGAAGTTGTTCTTGAGT+AGG - chr1_1:51502492-51502511 None:intergenic 30.0%
! AGAACAACTTCTAAAGATGA+TGG + chr1_1:51502497-51502516 Msa0027240:CDS 30.0%
AGATATATGTGATTGCATGT+TGG + chr1_1:51502584-51502603 Msa0027240:CDS 30.0%
AGGCAGAAAAAGAATTAACT+TGG - chr1_1:51502761-51502780 None:intergenic 30.0%
! AGTTAATTCTTTTTCTGCCT+TGG + chr1_1:51502761-51502780 Msa0027240:CDS 30.0%
ATCAATTGTTCTGTTCATCT+CGG - chr1_1:51502850-51502869 None:intergenic 30.0%
ACTACTAAACTGAGTGAATT+TGG - chr1_1:51502918-51502937 None:intergenic 30.0%
! TATTCTCTTCTCCTTTTGTA+AGG - chr1_1:51502998-51503017 None:intergenic 30.0%
!! AAATGTTAACAGAAGCATCT+CGG - chr1_1:51503100-51503119 None:intergenic 30.0%
AACATTTCTCTATCTCGTAT+TGG + chr1_1:51503113-51503132 Msa0027240:CDS 30.0%
ACATTTCTCTATCTCGTATT+GGG + chr1_1:51503114-51503133 Msa0027240:CDS 30.0%
AAATTTGCATATACAGCTCA+AGG + chr1_1:51503218-51503237 Msa0027240:CDS 30.0%
TACTGTAATACATAGGAACT+TGG - chr1_1:51503603-51503622 None:intergenic 30.0%
GAGTTTCTACTGTAATACAT+AGG - chr1_1:51503610-51503629 None:intergenic 30.0%
ATAATAAATTTGTCCAGTCC+CGG + chr1_1:51503668-51503687 Msa0027240:intron 30.0%
! GGAGATCCCTTTATAATTTT+CGG + chr1_1:51503749-51503768 Msa0027240:intron 30.0%
TTGGGACCGAAAATTATAAA+GGG - chr1_1:51503758-51503777 None:intergenic 30.0%
ACTACTGTGTTCATATACAT+TGG - chr1_1:51503894-51503913 None:intergenic 30.0%
AACATGAAATGTGCTGAAAA+TGG + chr1_1:51504298-51504317 Msa0027240:CDS 30.0%
ACATGAAATGTGCTGAAAAT+GGG + chr1_1:51504299-51504318 Msa0027240:CDS 30.0%
TTGCTAGATTTATCAATCAC+AGG + chr1_1:51504419-51504438 Msa0027240:CDS 30.0%
ATTTCTCACCTATTGTTTCA+AGG + chr1_1:51504448-51504467 Msa0027240:intron 30.0%
TCACCTTAAAATTCAAGCTA+GGG + chr1_1:51504474-51504493 Msa0027240:intron 30.0%
! TTTCCCTAGCTTGAATTTTA+AGG - chr1_1:51504480-51504499 None:intergenic 30.0%
AGGACATAACAATTGATATC+TGG + chr1_1:51504513-51504532 Msa0027240:intron 30.0%
AAAAAAATGGAGGACATAGT+TGG + chr1_1:51504584-51504603 Msa0027240:intron 30.0%
AAAAAATGGAGGACATAGTT+GGG + chr1_1:51504585-51504604 Msa0027240:intron 30.0%
! GAAAAGTGCAAACAAGTAAT+AGG - chr1_1:51504613-51504632 None:intergenic 30.0%
! TATGATTAAATTTTCCTCCC+TGG - chr1_1:51504716-51504735 None:intergenic 30.0%
! TATTTAAACAGTTTGGGGTA+GGG - chr1_1:51505115-51505134 None:intergenic 30.0%
! ATATTTAAACAGTTTGGGGT+AGG - chr1_1:51505116-51505135 None:intergenic 30.0%
!! AAGCCCAGTTTTATAAAGAT+GGG - chr1_1:51505199-51505218 None:intergenic 30.0%
!! TAAGCCCAGTTTTATAAAGA+TGG - chr1_1:51505200-51505219 None:intergenic 30.0%
TTTCATTTGCATGCTTCTAA+TGG + chr1_1:51505302-51505321 Msa0027240:intron 30.0%
ACATGATAGTAGTAATGATC+TGG - chr1_1:51505512-51505531 None:intergenic 30.0%
!! TTTTTCAGACTTCAAGGATT+AGG - chr1_1:51505544-51505563 None:intergenic 30.0%
!! AAACAGTTTTTCAGACTTCA+AGG - chr1_1:51505550-51505569 None:intergenic 30.0%
CAGATTAGTGTAACAACAAA+AGG - chr1_1:51505579-51505598 None:intergenic 30.0%
!! TATGTTTCTGGTGGTAAAAA+GGG - chr1_1:51505653-51505672 None:intergenic 30.0%
!!! ATGAAATTTTCTAGCTCACT+TGG + chr1_1:51505726-51505745 Msa0027240:intron 30.0%
!!! TGAAATTTTCTAGCTCACTT+GGG + chr1_1:51505727-51505746 Msa0027240:intron 30.0%
AAATGCTTATGTACTTTGAG+TGG + chr1_1:51505900-51505919 Msa0027240:intron 30.0%
!!! ATTTTGTTTCTGCAGGATTA+TGG + chr1_1:51506019-51506038 Msa0027240:intron 30.0%
! TGGATTGATAGTTGTTGAAA+AGG + chr1_1:51506175-51506194 Msa0027240:intron 30.0%
CGAAAATCACACATCAATAA+TGG - chr1_1:51506369-51506388 None:intergenic 30.0%
!! ATAGCTTTATGGGAAGTATT+AGG + chr1_1:51506589-51506608 Msa0027240:three_prime_UTR 30.0%
!!! AGTGCCATTTTGTTGTTTCT+GGG - chr1_1:51500008-51500027 None:intergenic 35.0%
!!! TAGTGCCATTTTGTTGTTTC+TGG - chr1_1:51500009-51500028 None:intergenic 35.0%
AAATGGACCTAGGTTAGAAT+CGG - chr1_1:51500230-51500249 None:intergenic 35.0%
!!! TGTGGTTTTGGGTTTTTGTT+TGG + chr1_1:51500305-51500324 Msa0027240:intron 35.0%
AAAGTCATGAGTGAGTCAAA+GGG - chr1_1:51500535-51500554 None:intergenic 35.0%
! TATTTTCTTAACCGGTGTCT+TGG + chr1_1:51500651-51500670 Msa0027240:intron 35.0%
TGACTGTTAGAAGAATGGTT+AGG + chr1_1:51500731-51500750 Msa0027240:intron 35.0%
TTCCTGAAGCAAAAGTGAAA+CGG + chr1_1:51500934-51500953 Msa0027240:CDS 35.0%
TAAAAACTGGCAACTTATCG+AGG + chr1_1:51500986-51501005 Msa0027240:CDS 35.0%
ATATAACCAGGAAGAAGAGA+TGG + chr1_1:51501282-51501301 Msa0027240:intron 35.0%
CGAGCAGATTCAACATTTAA+CGG - chr1_1:51501322-51501341 None:intergenic 35.0%
TCTATGTGAGACTTCTTCAA+CGG - chr1_1:51501406-51501425 None:intergenic 35.0%
GAAGAAGTCTCACATAGAAA+AGG + chr1_1:51501408-51501427 Msa0027240:CDS 35.0%
! GTCAATTCATAAGAAGCATG+TGG - chr1_1:51501562-51501581 None:intergenic 35.0%
TCATAATCTTCCTCATCAAC+GGG - chr1_1:51501601-51501620 None:intergenic 35.0%
CTCATAATCTTCCTCATCAA+CGG - chr1_1:51501602-51501621 None:intergenic 35.0%
TTGATGAGGAAGATTATGAG+CGG + chr1_1:51501602-51501621 Msa0027240:CDS 35.0%
ATAGTTCATTGAATACCAGG+GGG - chr1_1:51501646-51501665 None:intergenic 35.0%
GATAGTTCATTGAATACCAG+GGG - chr1_1:51501647-51501666 None:intergenic 35.0%
GGATAGTTCATTGAATACCA+GGG - chr1_1:51501648-51501667 None:intergenic 35.0%
TGAGTTTGAATCACAATCCA+TGG - chr1_1:51501790-51501809 None:intergenic 35.0%
GCTTGCTTGCATATTGTTTA+TGG - chr1_1:51502071-51502090 None:intergenic 35.0%
CGAAAGAACGATATGAAAAG+TGG - chr1_1:51502221-51502240 None:intergenic 35.0%
!! AATGGTGTTACTGAAAAGCA+AGG + chr1_1:51502324-51502343 Msa0027240:CDS 35.0%
! ACAACTTCTAAAGATGATGG+AGG + chr1_1:51502500-51502519 Msa0027240:CDS 35.0%
! ATCGACCCAAATTTTTCTGT+CGG + chr1_1:51502549-51502568 Msa0027240:CDS 35.0%
TCAAACGATAACTCACAAGA+AGG + chr1_1:51502621-51502640 Msa0027240:CDS 35.0%
ATCAAGCATAGATGTGTCAA+AGG + chr1_1:51502656-51502675 Msa0027240:CDS 35.0%
TGCATTCTAACATCACTTTG+TGG - chr1_1:51502876-51502895 None:intergenic 35.0%
TTATACGATCTTCTGTAGAC+TGG - chr1_1:51502953-51502972 None:intergenic 35.0%
AGTCTACAGAAGATCGTATA+AGG + chr1_1:51502952-51502971 Msa0027240:CDS 35.0%
GATGTTAGTGACCTTACAAA+AGG + chr1_1:51502984-51503003 Msa0027240:CDS 35.0%
!!! TTTTGGGGTATGTAGTTGAA+AGG - chr1_1:51503068-51503087 None:intergenic 35.0%
CATTTCTCTATCTCGTATTG+GGG + chr1_1:51503115-51503134 Msa0027240:CDS 35.0%
TGTGCCTGTACATATAAAAC+TGG + chr1_1:51503191-51503210 Msa0027240:CDS 35.0%
GTGCCTGTACATATAAAACT+GGG + chr1_1:51503192-51503211 Msa0027240:CDS 35.0%
TGCCTGTACATATAAAACTG+GGG + chr1_1:51503193-51503212 Msa0027240:CDS 35.0%
AGTAAAAGCAATGCTGTTGA+GGG - chr1_1:51503292-51503311 None:intergenic 35.0%
AAAGAATGTTGGAGCAAATG+TGG + chr1_1:51503392-51503411 Msa0027240:CDS 35.0%
TGGAATAACATACAACTTGC+AGG + chr1_1:51503451-51503470 Msa0027240:CDS 35.0%
ATGTCAAGTTATGTATCTGC+AGG + chr1_1:51503576-51503595 Msa0027240:intron 35.0%
CTTGGGACCGAAAATTATAA+AGG - chr1_1:51503759-51503778 None:intergenic 35.0%
! TAGGTATTTTTCACATCCGA+AGG + chr1_1:51504175-51504194 Msa0027240:intron 35.0%
! TTTTTCACATCCGAAGGAAA+AGG + chr1_1:51504181-51504200 Msa0027240:CDS 35.0%
TTGGGATTCAACATTTGTGA+AGG + chr1_1:51504354-51504373 Msa0027240:CDS 35.0%
AAATCTAGCAATGTTGCCAA+AGG - chr1_1:51504410-51504429 None:intergenic 35.0%
GTCACCTTAAAATTCAAGCT+AGG + chr1_1:51504473-51504492 Msa0027240:intron 35.0%
AAAATGCGAGAAGACAAAGT+AGG + chr1_1:51504537-51504556 Msa0027240:intron 35.0%
AACATAGGAAGACATAACCA+GGG + chr1_1:51504696-51504715 Msa0027240:intron 35.0%
GATAGATAAACAGTTATGCG+AGG - chr1_1:51505168-51505187 None:intergenic 35.0%
AAACATTCAAACATTTGCCG+AGG - chr1_1:51505399-51505418 None:intergenic 35.0%
TGTTGTTACACTAATCTGTG+TGG + chr1_1:51505581-51505600 Msa0027240:intron 35.0%
!! CTATGTTTCTGGTGGTAAAA+AGG - chr1_1:51505654-51505673 None:intergenic 35.0%
TTAGCAACGATTAACACAGT+TGG + chr1_1:51505821-51505840 Msa0027240:intron 35.0%
TAGCAACGATTAACACAGTT+GGG + chr1_1:51505822-51505841 Msa0027240:intron 35.0%
!! ACAGTTTGACAGGTTGATTA+TGG - chr1_1:51506060-51506079 None:intergenic 35.0%
AAACTGTTTCAGTGCAAATG+TGG + chr1_1:51506073-51506092 Msa0027240:CDS 35.0%
ATATGAAGCGATCAAACAGT+AGG + chr1_1:51506113-51506132 Msa0027240:intron 35.0%
! ACTTTGTTGTAGAACTTGAG+AGG + chr1_1:51506244-51506263 Msa0027240:intron 35.0%
CTTATAGCTTATGCTCTGAT+TGG + chr1_1:51506302-51506321 Msa0027240:intron 35.0%
TTAACGAAGGACCAAAATGA+AGG - chr1_1:51506646-51506665 None:intergenic 35.0%
!!! TGCCATTTTGTTGTTTCTGG+GGG - chr1_1:51500006-51500025 None:intergenic 40.0%
!!! GTGCCATTTTGTTGTTTCTG+GGG - chr1_1:51500007-51500026 None:intergenic 40.0%
ATGAAAGGGTTTACCTACCT+GGG - chr1_1:51500053-51500072 None:intergenic 40.0%
TTGTGAAGTGAGAGATGTTG+TGG - chr1_1:51500118-51500137 None:intergenic 40.0%
ATGATCTGGTGAAGGAAGAA+AGG - chr1_1:51500154-51500173 None:intergenic 40.0%
TCTTCTTCCGATTCTAACCT+AGG + chr1_1:51500220-51500239 Msa0027240:five_prime_UTR 40.0%
GAGTGAAAAGAAATGGACCT+AGG - chr1_1:51500240-51500259 None:intergenic 40.0%
AAGTCATGAGTGAGTCAAAG+GGG - chr1_1:51500534-51500553 None:intergenic 40.0%
CAAAGTCATGAGTGAGTCAA+AGG - chr1_1:51500536-51500555 None:intergenic 40.0%
CTTTGACTCACTCATGACTT+TGG + chr1_1:51500534-51500553 Msa0027240:intron 40.0%
AGCTGTGACTGTTAGAAGAA+TGG + chr1_1:51500726-51500745 Msa0027240:intron 40.0%
ACTGATTATAAATGGCGCCA+AGG + chr1_1:51500862-51500881 Msa0027240:exon 40.0%
TCCTGAAGCAAAAGTGAAAC+GGG + chr1_1:51500935-51500954 Msa0027240:CDS 40.0%
! TGAAGAAGGCGATGATTTTG+AGG + chr1_1:51501043-51501062 Msa0027240:CDS 40.0%
AACATTTAACGGAGCTTCCT+CGG - chr1_1:51501311-51501330 None:intergenic 40.0%
TATGTGAGACTTCTTCAACG+GGG - chr1_1:51501404-51501423 None:intergenic 40.0%
CTATGTGAGACTTCTTCAAC+GGG - chr1_1:51501405-51501424 None:intergenic 40.0%
CAGTGTCATCTGATGTGAAT+GGG + chr1_1:51501476-51501495 Msa0027240:CDS 40.0%
TCATAACTAGCATCTCGCAT+GGG - chr1_1:51501517-51501536 None:intergenic 40.0%
GGGATAGTTCATTGAATACC+AGG - chr1_1:51501649-51501668 None:intergenic 40.0%
CCACAAGCAAAACCATAGTT+GGG - chr1_1:51501829-51501848 None:intergenic 40.0%
TCCACAAGCAAAACCATAGT+TGG - chr1_1:51501830-51501849 None:intergenic 40.0%
!! ACTATGGTTTTGCTTGTGGA+TGG + chr1_1:51501830-51501849 Msa0027240:intron 40.0%
TTGTCAGCTGAAACTGATAG+AGG + chr1_1:51502016-51502035 Msa0027240:intron 40.0%
!! GGCACTGCTTGTATTTTAGA+AGG + chr1_1:51502142-51502161 Msa0027240:intron 40.0%
ATGCAGAACCATCAAGCTTA+AGG + chr1_1:51502286-51502305 Msa0027240:intron 40.0%
TTACGTGTGTTATGGTGTGA+TGG - chr1_1:51502369-51502388 None:intergenic 40.0%
CCACTTCTTTACGTGTGTTA+TGG - chr1_1:51502377-51502396 None:intergenic 40.0%
CCATAACACACGTAAAGAAG+TGG + chr1_1:51502374-51502393 Msa0027240:CDS 40.0%
AGATGTGTCAAAGGAATCAG+AGG + chr1_1:51502665-51502684 Msa0027240:CDS 40.0%
TCAAAGGAATCAGAGGTTGA+TGG + chr1_1:51502672-51502691 Msa0027240:CDS 40.0%
ATCATCCAAACTGCTCTGAT+GGG - chr1_1:51502814-51502833 None:intergenic 40.0%
AAGTGATGTTAGAATGCAGC+CGG + chr1_1:51502878-51502897 Msa0027240:CDS 40.0%
ACTGAGTGAATTTGGAGACA+CGG - chr1_1:51502910-51502929 None:intergenic 40.0%
! ATCTCGGAACACAAGGTTTT+GGG - chr1_1:51503084-51503103 None:intergenic 40.0%
CAAGATGCAACTTCCTATAC+AGG - chr1_1:51503156-51503175 None:intergenic 40.0%
GCCTGTACATATAAAACTGG+GGG + chr1_1:51503194-51503213 Msa0027240:CDS 40.0%
TACAGCTCAAGGCCTAATTA+AGG + chr1_1:51503229-51503248 Msa0027240:CDS 40.0%
CAGTAAAAGCAATGCTGTTG+AGG - chr1_1:51503293-51503312 None:intergenic 40.0%
GCAAAGATTGTCCACTTGAA+AGG + chr1_1:51503312-51503331 Msa0027240:CDS 40.0%
TCACTCTTTGACCTTTCAAG+TGG - chr1_1:51503326-51503345 None:intergenic 40.0%
CTTGAAAGGTCAAAGAGTGA+TGG + chr1_1:51503326-51503345 Msa0027240:CDS 40.0%
GTCAAAGAGTGATGGTTGTT+TGG + chr1_1:51503334-51503353 Msa0027240:CDS 40.0%
! GGTTGTTTGGAACCATGTAA+AGG + chr1_1:51503347-51503366 Msa0027240:CDS 40.0%
CTCTTCAAGTGTCCTTTACA+TGG - chr1_1:51503362-51503381 None:intergenic 40.0%
AGTTGTATGTTATTCCACGC+TGG - chr1_1:51503448-51503467 None:intergenic 40.0%
!!! TTTTTTACATTGGCCCAAGC+CGG - chr1_1:51503690-51503709 None:intergenic 40.0%
! TCACACACAAATGCTCCTTT+TGG - chr1_1:51504235-51504254 None:intergenic 40.0%
CCTCTCATGCAACTCTTTAA+TGG - chr1_1:51504278-51504297 None:intergenic 40.0%
CCATTAAAGAGTTGCATGAG+AGG + chr1_1:51504275-51504294 Msa0027240:CDS 40.0%
ATCTACTTACCCTGTTCTAC+TGG + chr1_1:51504324-51504343 Msa0027240:CDS 40.0%
GCTAGGGAAAACAGAGAAAT+AGG + chr1_1:51504490-51504509 Msa0027240:intron 40.0%
AGGGAAAACAGAGAAATAGG+AGG + chr1_1:51504493-51504512 Msa0027240:intron 40.0%
CTGGTTATGTCTTCCTATGT+TGG - chr1_1:51504697-51504716 None:intergenic 40.0%
CAACATAGGAAGACATAACC+AGG + chr1_1:51504695-51504714 Msa0027240:intron 40.0%
AAGGAAGGTAAATCAGCTCA+AGG - chr1_1:51505139-51505158 None:intergenic 40.0%
CAGATGTTCTGATGCAAACT+TGG + chr1_1:51505460-51505479 Msa0027240:intron 40.0%
CTGGACACTCAATCTGAATT+GGG - chr1_1:51505493-51505512 None:intergenic 40.0%
TCTGGACACTCAATCTGAAT+TGG - chr1_1:51505494-51505513 None:intergenic 40.0%
TTGCACTGAAACAGTTTGAC+AGG - chr1_1:51506070-51506089 None:intergenic 40.0%
ATCCAATTTGACATGTGTCG+TGG - chr1_1:51506201-51506220 None:intergenic 40.0%
! GAGGCAACTTATTTGCCTTT+TGG + chr1_1:51506263-51506282 Msa0027240:intron 40.0%
ATCAATAATGGCGAAAGTGG+TGG - chr1_1:51506357-51506376 None:intergenic 40.0%
CACATCAATAATGGCGAAAG+TGG - chr1_1:51506360-51506379 None:intergenic 40.0%
! TGCTGCATTGAACCATTTTG+TGG + chr1_1:51506453-51506472 Msa0027240:three_prime_UTR 40.0%
! TACTTCAGGGATGCATGTTT+TGG + chr1_1:51506516-51506535 Msa0027240:three_prime_UTR 40.0%
!! TTTTGGGAGCTTATTACCGT+TGG + chr1_1:51506543-51506562 Msa0027240:three_prime_UTR 40.0%
AGACTGAGAATGAGAGTGAG+AGG - chr1_1:51499975-51499994 None:intergenic 45.0%
CACCCCCAGAAACAACAAAA+TGG + chr1_1:51500001-51500020 Msa0027240:five_prime_UTR 45.0%
CTTCAGTCAGTTGAAAACCC+AGG + chr1_1:51500033-51500052 Msa0027240:five_prime_UTR 45.0%
AGTCAGTTGAAAACCCAGGT+AGG + chr1_1:51500037-51500056 Msa0027240:intron 45.0%
GATGAAAGGGTTTACCTACC+TGG - chr1_1:51500054-51500073 None:intergenic 45.0%
TTCGTAGCATGATCTGGTGA+AGG - chr1_1:51500162-51500181 None:intergenic 45.0%
ATGAAGCAATGTTGTGAGCG+AGG - chr1_1:51500186-51500205 None:intergenic 45.0%
!!! GCTATTTTTGGATTGGGCCT+TGG - chr1_1:51500882-51500901 None:intergenic 45.0%
GCCCAATCCAAAAATAGCAG+CGG + chr1_1:51500884-51500903 Msa0027240:CDS 45.0%
!!! GCCGCTGCTATTTTTGGATT+GGG - chr1_1:51500888-51500907 None:intergenic 45.0%
AAACTCTGTCATTGCCTGCA+GGG - chr1_1:51500910-51500929 None:intergenic 45.0%
TGCAGGCAATGACAGAGTTT+GGG + chr1_1:51500910-51500929 Msa0027240:CDS 45.0%
TAACCAGGAAGAAGAGATGG+AGG + chr1_1:51501285-51501304 Msa0027240:intron 45.0%
GAAAAGGACACAGCACTTGA+AGG + chr1_1:51501424-51501443 Msa0027240:CDS 45.0%
GCAGTGTCATCTGATGTGAA+TGG + chr1_1:51501475-51501494 Msa0027240:CDS 45.0%
TGTCATCTGATGTGAATGGG+AGG + chr1_1:51501479-51501498 Msa0027240:CDS 45.0%
GTCATCTGATGTGAATGGGA+GGG + chr1_1:51501480-51501499 Msa0027240:CDS 45.0%
GTCATAACTAGCATCTCGCA+TGG - chr1_1:51501518-51501537 None:intergenic 45.0%
TGCGAGATGCTAGTTATGAC+AGG + chr1_1:51501518-51501537 Msa0027240:CDS 45.0%
GCGAGATGCTAGTTATGACA+GGG + chr1_1:51501519-51501538 Msa0027240:CDS 45.0%
CGAGATGCTAGTTATGACAG+GGG + chr1_1:51501520-51501539 Msa0027240:CDS 45.0%
! TAAGAAGCATGTGGTGATGC+AGG - chr1_1:51501553-51501572 None:intergenic 45.0%
! AACGGGCTCAGATTTAGGTA+CGG - chr1_1:51501584-51501603 None:intergenic 45.0%
! TCATCAACGGGCTCAGATTT+AGG - chr1_1:51501589-51501608 None:intergenic 45.0%
TAAATCTGAGCCCGTTGATG+AGG + chr1_1:51501588-51501607 Msa0027240:CDS 45.0%
!! CCCAACTATGGTTTTGCTTG+TGG + chr1_1:51501826-51501845 Msa0027240:intron 45.0%
GAATAGCGCCTTAAGCTTGA+TGG - chr1_1:51502297-51502316 None:intergenic 45.0%
! CAAGCTTAAGGCGCTATTCA+AGG + chr1_1:51502298-51502317 Msa0027240:CDS 45.0%
AGGCGCTATTCAAGGAAGAA+TGG + chr1_1:51502306-51502325 Msa0027240:CDS 45.0%
!! TGATGGTGTCATGGAGACAT+GGG - chr1_1:51502352-51502371 None:intergenic 45.0%
! GTTATGGTGTGATGGTGTCA+TGG - chr1_1:51502361-51502380 None:intergenic 45.0%
GTTGTTCTTGAGTAGGCATG+CGG - chr1_1:51502485-51502504 None:intergenic 45.0%
ACGGGTTCTCACTCATCAAA+TGG + chr1_1:51502729-51502748 Msa0027240:CDS 45.0%
CATCATCCAAACTGCTCTGA+TGG - chr1_1:51502815-51502834 None:intergenic 45.0%
CAGTTTGGATGATGCTGTAC+TGG + chr1_1:51502821-51502840 Msa0027240:CDS 45.0%
CTGAGTGAATTTGGAGACAC+GGG - chr1_1:51502909-51502928 None:intergenic 45.0%
! TCTTCTGTAGACTGGTGATG+TGG - chr1_1:51502945-51502964 None:intergenic 45.0%
GGTATGTAGTTGAAAGGTGG+TGG - chr1_1:51503062-51503081 None:intergenic 45.0%
TGGGGTATGTAGTTGAAAGG+TGG - chr1_1:51503065-51503084 None:intergenic 45.0%
! TCTCGGAACACAAGGTTTTG+GGG - chr1_1:51503083-51503102 None:intergenic 45.0%
! CATCTCGGAACACAAGGTTT+TGG - chr1_1:51503085-51503104 None:intergenic 45.0%
GAGGACAGTTGTTCCTGTAT+AGG + chr1_1:51503140-51503159 Msa0027240:CDS 45.0%
!! GCCCCCAGTTTTATATGTAC+AGG - chr1_1:51503198-51503217 None:intergenic 45.0%
! TTTTTACATTGGCCCAAGCC+GGG - chr1_1:51503689-51503708 None:intergenic 45.0%
AATTACGTTGCAGCGAACCT+TGG - chr1_1:51503936-51503955 None:intergenic 45.0%
CGCTGCAACGTAATTCTAAG+AGG + chr1_1:51503941-51503960 Msa0027240:intron 45.0%
TCACATCCGAAGGAAAAGGA+TGG + chr1_1:51504185-51504204 Msa0027240:CDS 45.0%
CACATCCGAAGGAAAAGGAT+GGG + chr1_1:51504186-51504205 Msa0027240:CDS 45.0%
ACATCCGAAGGAAAAGGATG+GGG + chr1_1:51504187-51504206 Msa0027240:CDS 45.0%
! AAGTCCCCATCCTTTTCCTT+CGG - chr1_1:51504194-51504213 None:intergenic 45.0%
ACCTTAGAGGAACTGCCAAA+AGG + chr1_1:51504217-51504236 Msa0027240:CDS 45.0%
! TCCTTTTGGCAGTTCCTCTA+AGG - chr1_1:51504221-51504240 None:intergenic 45.0%
GCATTTGTGTGTGAGTTTGC+TGG + chr1_1:51504241-51504260 Msa0027240:CDS 45.0%
TTACCCTGTTCTACTGGATG+CGG + chr1_1:51504330-51504349 Msa0027240:CDS 45.0%
GGTGACAGCCTTGAAACAAT+AGG - chr1_1:51504459-51504478 None:intergenic 45.0%
ATGCGAGAAGACAAAGTAGG+AGG + chr1_1:51504540-51504559 Msa0027240:intron 45.0%
ATAGGAAGACATAACCAGGG+AGG + chr1_1:51504699-51504718 Msa0027240:intron 45.0%
TATGCGAGGCAAGTTAAGGA+AGG - chr1_1:51505154-51505173 None:intergenic 45.0%
CAGTTATGCGAGGCAAGTTA+AGG - chr1_1:51505158-51505177 None:intergenic 45.0%
ACTTCTGCCAAATAGTGCCT+CGG + chr1_1:51505379-51505398 Msa0027240:intron 45.0%
! ACATTTGCCGAGGCACTATT+TGG - chr1_1:51505389-51505408 None:intergenic 45.0%
TTCATGCGCTGCTATGTTTC+TGG - chr1_1:51505665-51505684 None:intergenic 45.0%
AATGTGGCAGTAAGTTCTGC+AGG + chr1_1:51506089-51506108 Msa0027240:CDS 45.0%
! CTTTTGATGCAGGATCCACT+TGG + chr1_1:51506403-51506422 Msa0027240:intron 45.0%
AGCAATTAACGCAGACCAAG+TGG - chr1_1:51506421-51506440 None:intergenic 45.0%
ACTTGGTCTGCGTTAATTGC+TGG + chr1_1:51506420-51506439 Msa0027240:CDS 45.0%
AACAAGACCCAGCTTACTTC+AGG + chr1_1:51506502-51506521 Msa0027240:three_prime_UTR 45.0%
ACAAGACCCAGCTTACTTCA+GGG + chr1_1:51506503-51506522 Msa0027240:three_prime_UTR 45.0%
ATGCATCCCTGAAGTAAGCT+GGG - chr1_1:51506512-51506531 None:intergenic 45.0%
AACTATAGCTCAACCGCCAA+CGG - chr1_1:51506562-51506581 None:intergenic 45.0%
!! AACAATAAAAATAATATTAA+GGG - chr1_1:51501669-51501688 None:intergenic 5.0%
!! AAACAATAAAAATAATATTA+AGG - chr1_1:51501670-51501689 None:intergenic 5.0%
!!! ATAATAAGATAATAATTTTT+CGG + chr1_1:51503727-51503746 Msa0027240:intron 5.0%
!!! CTAATTAATATTTTAAATTT+AGG + chr1_1:51504156-51504175 Msa0027240:intron 5.0%
GAATGAGAGTGAGAGGAACG+AGG - chr1_1:51499968-51499987 None:intergenic 50.0%
CGAGGTTTCGTAGCATGATC+TGG - chr1_1:51500168-51500187 None:intergenic 50.0%
!!! GGCCGCTGCTATTTTTGGAT+TGG - chr1_1:51500889-51500908 None:intergenic 50.0%
CAAACTCTGTCATTGCCTGC+AGG - chr1_1:51500911-51500930 None:intergenic 50.0%
CTGCAGGCAATGACAGAGTT+TGG + chr1_1:51500909-51500928 Msa0027240:CDS 50.0%
!! GCCCGTTTCACTTTTGCTTC+AGG - chr1_1:51500939-51500958 None:intergenic 50.0%
! ATTTTTACCCCTCTCCCCTG+TGG + chr1_1:51501081-51501100 Msa0027240:intron 50.0%
AAGGACACAGCACTTGAAGG+CGG + chr1_1:51501427-51501446 Msa0027240:CDS 50.0%
! GATGACACTGCGTTGTTTCG+AGG - chr1_1:51501466-51501485 None:intergenic 50.0%
AGCTGAAACTGATAGAGGCG+AGG + chr1_1:51502021-51502040 Msa0027240:intron 50.0%
!! GTGATGGTGTCATGGAGACA+TGG - chr1_1:51502353-51502372 None:intergenic 50.0%
TGTGATAGCCTCTTCAGCTC+AGG + chr1_1:51502407-51502426 Msa0027240:CDS 50.0%
GTGATAGCCTCTTCAGCTCA+GGG + chr1_1:51502408-51502427 Msa0027240:CDS 50.0%
TACTTCTCCCTGAGCTGAAG+AGG - chr1_1:51502418-51502437 None:intergenic 50.0%
TGAGTAGGCATGCGGAAATC+TGG - chr1_1:51502477-51502496 None:intergenic 50.0%
CAAATCCTTACTGCCCCCAA+TGG - chr1_1:51502706-51502725 None:intergenic 50.0%
CATTGGGGGCAGTAAGGATT+TGG + chr1_1:51502704-51502723 Msa0027240:CDS 50.0%
GGGCAGTAAGGATTTGGACA+CGG + chr1_1:51502710-51502729 Msa0027240:CDS 50.0%
GGCAGTAAGGATTTGGACAC+GGG + chr1_1:51502711-51502730 Msa0027240:CDS 50.0%
!! TCTGATGGGCTGGTGAAAAG+GGG - chr1_1:51502800-51502819 None:intergenic 50.0%
!! CTCTGATGGGCTGGTGAAAA+GGG - chr1_1:51502801-51502820 None:intergenic 50.0%
TGATGTTAGAATGCAGCCGG+AGG + chr1_1:51502881-51502900 Msa0027240:CDS 50.0%
!! CAGAAGCATCTCGGAACACA+AGG - chr1_1:51503091-51503110 None:intergenic 50.0%
TCTATCTCGTATTGGGGCTG+AGG + chr1_1:51503121-51503140 Msa0027240:CDS 50.0%
TGTTGGAGCAAATGTGGCTG+TGG + chr1_1:51503398-51503417 Msa0027240:CDS 50.0%
GTTGGAGCAAATGTGGCTGT+GGG + chr1_1:51503399-51503418 Msa0027240:CDS 50.0%
TGTGGCTGTGGGAAACAATG+TGG + chr1_1:51503410-51503429 Msa0027240:CDS 50.0%
AAATTTGTCCAGTCCCGGCT+TGG + chr1_1:51503673-51503692 Msa0027240:intron 50.0%
AATTTGTCCAGTCCCGGCTT+GGG + chr1_1:51503674-51503693 Msa0027240:intron 50.0%
ATGGGGACTTCGTACCTTAG+AGG + chr1_1:51504204-51504223 Msa0027240:CDS 50.0%
AAGCCGCATCCAGTAGAACA+GGG - chr1_1:51504336-51504355 None:intergenic 50.0%
TGTTCTACTGGATGCGGCTT+GGG + chr1_1:51504336-51504355 Msa0027240:CDS 50.0%
TGCTTAGATGCAGCGTCCTT+TGG + chr1_1:51504391-51504410 Msa0027240:CDS 50.0%
CAGACTCACCTGGTGGAAAA+AGG - chr1_1:51504999-51505018 None:intergenic 50.0%
! TTTGGGGTAGGGAGAGATCA+AGG - chr1_1:51505104-51505123 None:intergenic 50.0%
TCTCCTAGCTGAGCAGTGAA+AGG + chr1_1:51505268-51505287 Msa0027240:intron 50.0%
GATCCTTTCACTGCTCAGCT+AGG - chr1_1:51505274-51505293 None:intergenic 50.0%
!! ATGCGCTGCTATGTTTCTGG+TGG - chr1_1:51505662-51505681 None:intergenic 50.0%
AGCGCATGAAGAGCTCACTT+GGG + chr1_1:51505675-51505694 Msa0027240:CDS 50.0%
GGCCACGACACATGTCAAAT+TGG + chr1_1:51506196-51506215 Msa0027240:intron 50.0%
! AGTGGTGGTGTCTGCATACA+TGG - chr1_1:51506342-51506361 None:intergenic 50.0%
! ACCATTTTGTGGTCTCACCC+AGG + chr1_1:51506464-51506483 Msa0027240:three_prime_UTR 50.0%
ACCTGGGTGAGACCACAAAA+TGG - chr1_1:51506468-51506487 None:intergenic 50.0%
TTACGACTCATCCAGGACCT+GGG - chr1_1:51506484-51506503 None:intergenic 50.0%
!! GGTCTTGTTACGACTCATCC+AGG - chr1_1:51506491-51506510 None:intergenic 50.0%
CATGCATCCCTGAAGTAAGC+TGG - chr1_1:51506513-51506532 None:intergenic 50.0%
TGGGAGCTTATTACCGTTGG+CGG + chr1_1:51506546-51506565 Msa0027240:three_prime_UTR 50.0%
GAGAGGAACGAGGAGGTTTG+AGG - chr1_1:51499958-51499977 None:intergenic 55.0%
TGAGAGTGAGAGGAACGAGG+AGG - chr1_1:51499965-51499984 None:intergenic 55.0%
!!! TGCAGGGCCGCTGCTATTTT+TGG - chr1_1:51500894-51500913 None:intergenic 55.0%
AAAAATAGCAGCGGCCCTGC+AGG + chr1_1:51500893-51500912 Msa0027240:CDS 55.0%
ACGGGGAAGAAGCTGAGCTA+GGG - chr1_1:51501387-51501406 None:intergenic 55.0%
AACGGGGAAGAAGCTGAGCT+AGG - chr1_1:51501388-51501407 None:intergenic 55.0%
ACCAGGGGGAACCATTGCAA+GGG - chr1_1:51501632-51501651 None:intergenic 55.0%
TACCAGGGGGAACCATTGCA+AGG - chr1_1:51501633-51501652 None:intergenic 55.0%
CACACACACGCACCCAACTA+TGG + chr1_1:51501814-51501833 Msa0027240:intron 55.0%
! TTGATGGCACACCCGCCATT+GGG + chr1_1:51502688-51502707 Msa0027240:CDS 55.0%
ATCCTTACTGCCCCCAATGG+CGG - chr1_1:51502703-51502722 None:intergenic 55.0%
TCTGCCTTGGTTTCACCTCG+AGG + chr1_1:51502774-51502793 Msa0027240:CDS 55.0%
!! GCTCTGATGGGCTGGTGAAA+AGG - chr1_1:51502802-51502821 None:intergenic 55.0%
ACCAGCCCATCAGAGCAGTT+TGG + chr1_1:51502806-51502825 Msa0027240:CDS 55.0%
! TCCAAACTGCTCTGATGGGC+TGG - chr1_1:51502810-51502829 None:intergenic 55.0%
TTTGGAGACACGGGATCCTC+CGG - chr1_1:51502900-51502919 None:intergenic 55.0%
GGAAATCGCGTTATCCAGCG+TGG + chr1_1:51503431-51503450 Msa0027240:CDS 55.0%
CAAGCCGCATCCAGTAGAAC+AGG - chr1_1:51504337-51504356 None:intergenic 55.0%
CTGTTCTACTGGATGCGGCT+TGG + chr1_1:51504335-51504354 Msa0027240:CDS 55.0%
! AGTCGGAGCCTTTTTCCACC+AGG + chr1_1:51504988-51505007 Msa0027240:intron 55.0%
ATCCATGCTGCAGACTCACC+TGG - chr1_1:51505009-51505028 None:intergenic 55.0%
CAGCGCATGAAGAGCTCACT+TGG + chr1_1:51505674-51505693 Msa0027240:CDS 55.0%
GTTACGACTCATCCAGGACC+TGG - chr1_1:51506485-51506504 None:intergenic 55.0%
CGGCCTCCATCTCTTCTTCC+TGG - chr1_1:51501291-51501310 None:intergenic 60.0%
GGAAGAAGAGATGGAGGCCG+AGG + chr1_1:51501291-51501310 Msa0027240:intron 60.0%
CGGGGAAGAAGCTGAGCTAG+GGG - chr1_1:51501386-51501405 None:intergenic 60.0%
CCAGGGGGAACCATTGCAAG+GGG - chr1_1:51501631-51501650 None:intergenic 60.0%
AGCTGCAGCTCAGCTCTCCA+GGG + chr1_1:51502450-51502469 Msa0027240:CDS 60.0%
GCATGCGGAAATCTGGTCCC+TGG - chr1_1:51502470-51502489 None:intergenic 60.0%
!! GTTGATGGCACACCCGCCAT+TGG + chr1_1:51502687-51502706 Msa0027240:CDS 60.0%
TGATGGCACACCCGCCATTG+GGG + chr1_1:51502689-51502708 Msa0027240:CDS 60.0%
TCCTTACTGCCCCCAATGGC+GGG - chr1_1:51502702-51502721 None:intergenic 60.0%
CATGCTGCAGACTCACCTGG+TGG - chr1_1:51505006-51505025 None:intergenic 60.0%
CACCAGGTGAGTCTGCAGCA+TGG + chr1_1:51505004-51505023 Msa0027240:intron 60.0%
TTGTGGTCTCACCCAGGTCC+TGG + chr1_1:51506470-51506489 Msa0027240:three_prime_UTR 60.0%
CAGTGTGTGCGCAGCCACAG+GGG - chr1_1:51501098-51501117 None:intergenic 65.0%
GCAGTGTGTGCGCAGCCACA+GGG - chr1_1:51501099-51501118 None:intergenic 65.0%
TGCAGTGTGTGCGCAGCCAC+AGG - chr1_1:51501100-51501119 None:intergenic 65.0%
TGAGCGGCGTCCCCTTGCAA+TGG + chr1_1:51501618-51501637 Msa0027240:CDS 65.0%
CCCCTTGCAATGGTTCCCCC+TGG + chr1_1:51501628-51501647 Msa0027240:CDS 65.0%
GAGCTGCAGCTCAGCTCTCC+AGG + chr1_1:51502449-51502468 Msa0027240:CDS 65.0%
GATGGCACACCCGCCATTGG+GGG + chr1_1:51502690-51502709 Msa0027240:CDS 65.0%
ACCCGCCATTGGGGGCAGTA+AGG + chr1_1:51502698-51502717 Msa0027240:CDS 65.0%
GGGGCCTCGAGGTGAAACCA+AGG - chr1_1:51502781-51502800 None:intergenic 65.0%
GCTGGTGAAAAGGGGCCTCG+AGG - chr1_1:51502792-51502811 None:intergenic 65.0%
ACATTGGCCCAAGCCGGGAC+TGG - chr1_1:51503684-51503703 None:intergenic 65.0%
TGCGCAGCCACAGGGGAGAG+GGG - chr1_1:51501091-51501110 None:intergenic 70.0%
GTGCGCAGCCACAGGGGAGA+GGG - chr1_1:51501092-51501111 None:intergenic 70.0%
TGTGCGCAGCCACAGGGGAG+AGG - chr1_1:51501093-51501112 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 51499933 51506751 51499933 ID=Msa0027240;Name=Msa0027240
chr1_1 mRNA 51499933 51506751 51499933 ID=Msa0027240-mRNA-1;Parent=Msa0027240;Name=Msa0027240-mRNA-1;_AED=0.09;_eAED=0.09;_QI=221|1|1|1|0.8|0.72|11|305|758
chr1_1 exon 51499933 51500054 51499933 ID=Msa0027240-mRNA-1:exon:15088;Parent=Msa0027240-mRNA-1
chr1_1 exon 51500169 51500241 51500169 ID=Msa0027240-mRNA-1:exon:15089;Parent=Msa0027240-mRNA-1
chr1_1 exon 51500847 51501064 51500847 ID=Msa0027240-mRNA-1:exon:15090;Parent=Msa0027240-mRNA-1
chr1_1 exon 51501153 51501188 51501153 ID=Msa0027240-mRNA-1:exon:15091;Parent=Msa0027240-mRNA-1
chr1_1 exon 51501292 51501649 51501292 ID=Msa0027240-mRNA-1:exon:15092;Parent=Msa0027240-mRNA-1
chr1_1 exon 51502292 51503472 51502292 ID=Msa0027240-mRNA-1:exon:15093;Parent=Msa0027240-mRNA-1
chr1_1 exon 51504178 51504440 51504178 ID=Msa0027240-mRNA-1:exon:15094;Parent=Msa0027240-mRNA-1
chr1_1 exon 51505463 51505529 51505463 ID=Msa0027240-mRNA-1:exon:15095;Parent=Msa0027240-mRNA-1
chr1_1 exon 51505646 51505696 51505646 ID=Msa0027240-mRNA-1:exon:15096;Parent=Msa0027240-mRNA-1
chr1_1 exon 51506034 51506130 51506034 ID=Msa0027240-mRNA-1:exon:15097;Parent=Msa0027240-mRNA-1
chr1_1 exon 51506415 51506751 51506415 ID=Msa0027240-mRNA-1:exon:15098;Parent=Msa0027240-mRNA-1
chr1_1 five_prime_UTR 51499933 51500054 51499933 ID=Msa0027240-mRNA-1:five_prime_utr;Parent=Msa0027240-mRNA-1
chr1_1 five_prime_UTR 51500169 51500241 51500169 ID=Msa0027240-mRNA-1:five_prime_utr;Parent=Msa0027240-mRNA-1
chr1_1 five_prime_UTR 51500847 51500872 51500847 ID=Msa0027240-mRNA-1:five_prime_utr;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51500873 51501064 51500873 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51501153 51501188 51501153 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51501292 51501649 51501292 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51502292 51503472 51502292 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51504178 51504440 51504178 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51505463 51505529 51505463 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51505646 51505696 51505646 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51506034 51506130 51506034 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 CDS 51506415 51506446 51506415 ID=Msa0027240-mRNA-1:cds;Parent=Msa0027240-mRNA-1
chr1_1 three_prime_UTR 51506447 51506751 51506447 ID=Msa0027240-mRNA-1:three_prime_utr;Parent=Msa0027240-mRNA-1
Gene Sequence

>Msa0027240

ATGGCGCCAAGGCCCAATCCAAAAATAGCAGCGGCCCTGCAGGCAATGACAGAGTTTGGGATTCCTGAAGCAAAAGTGAAACGGGCGCTAAAGAAACTCCTTAAGTTGTTTGATAAAAACTGGCAACTTATCGAGGAAGAGAACTATAGAGCTTTATTGGATGCTATATTTGAAGAAGGCGATGATTTTGAGGAGCCAGAACCACAAAAGAAAAACAAGAGAGTGAATGAAGAAGAGATGGAGGCCGAGGAAGCTCCGTTAAATGTTGAATCTGCTCGACCTTTGAAAAGATTGAGATTAAGAGGACAAGAGAACAATTCCCCTAGCTCAGCTTCTTCCCCGTTGAAGAAGTCTCACATAGAAAAGGACACAGCACTTGAAGGCGGCTCTTCACAGCAGCCTCGAAACAACGCAGTGTCATCTGATGTGAATGGGAGGGTTGCAGCACGTCCCATGCGAGATGCTAGTTATGACAGGGGAAAGCAACCTGCATCACCACATGCTTCTTATGAATTGACCGTACCTAAATCTGAGCCCGTTGATGAGGAAGATTATGAGCGGCGTCCCCTTGCAATGGTTCCCCCTGAACCATCAAGCTTAAGGCGCTATTCAAGGAAGAATGGTGTTACTGAAAAGCAAGGTGCCCATGTCTCCATGACACCATCACACCATAACACACGTAAAGAAGTGGTTTCTGATGTTGTGATAGCCTCTTCAGCTCAGGGAGAAGTAAAACTTTCTCTGAGCTGCAGCTCAGCTCTCCAGGGACCAGATTTCCGCATGCCTACTCAAGAACAACTTCTAAAGATGATGGAGGATAAATGTCTGCGATCATATAAAATCATCGACCCAAATTTTTCTGTCGGAAAAATGTTGAGAGATATATGTGATTGCATGTTGGAATTTAGTACTGATTCAAACGATAACTCACAAGAAGGTTCAATGTCAAAATCAAGCATAGATGTGTCAAAGGAATCAGAGGTTGATGGCACACCCGCCATTGGGGGCAGTAAGGATTTGGACACGGGTTCTCACTCATCAAATGGATCAATCCAAGTTAATTCTTTTTCTGCCTTGGTTTCACCTCGAGGCCCCTTTTCACCAGCCCATCAGAGCAGTTTGGATGATGCTGTACTGGTTTCCGAGATGAACAGAACAATTGATATTCCACAAAGTGATGTTAGAATGCAGCCGGAGGATCCCGTGTCTCCAAATTCACTCAGTTTAGTAGTTGTTCCACATCACCAGTCTACAGAAGATCGTATAAGGTCTTATCATGATGTTAGTGACCTTACAAAAGGAGAAGAGAATAATCAAATTTCATGGGTGAATGAATCATCTACTAACGACTTTCCACCACCTTTCAACTACATACCCCAAAACCTTGTGTTCCGAGATGCTTCTGTTAACATTTCTCTATCTCGTATTGGGGCTGAGGACAGTTGTTCCTGTATAGGAAGTTGCATCTTGTTGTCAGACACACATTGTGCCTGTACATATAAAACTGGGGGCAAATTTGCATATACAGCTCAAGGCCTAATTAAGGAAGAATTTTTGGAAGAGTGTATTGCTATCAGTCACAACCCTCAACAGCATTGCTTTTACTGCAAAGATTGTCCACTTGAAAGGTCAAAGAGTGATGGTTGTTTGGAACCATGTAAAGGACACTTGAAGAGAAAGTTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAAACAATGTGGAAATCGCGTTATCCAGCGTGGAATAACATACAACTTGCAGGTATTTTTCACATCCGAAGGAAAAGGATGGGGACTTCGTACCTTAGAGGAACTGCCAAAAGGAGCATTTGTGTGTGAGTTTGCTGGAGAAATTTTAACCATTAAAGAGTTGCATGAGAGGAACATGAAATGTGCTGAAAATGGGAAATCTACTTACCCTGTTCTACTGGATGCGGCTTGGGATTCAACATTTGTGAAGGATGAAGAAGCTCTATGCTTAGATGCAGCGTCCTTTGGCAACATTGCTAGATTTATCAATCACAGATGTTCTGATGCAAACTTGGTTGAAATCCCAATTCAGATTGAGTGTCCAGATCATTACTACTATCATTTCGCCCTTTTTACCACCAGAAACATAGCAGCGCATGAAGAGCTCACTTGGGATTATGGCATTGACTTTGACGACCATAATCAACCTGTCAAACTGTTTCAGTGCAAATGTGGCAGTAAGTTCTGCAGGAATATGAAGCGATCAAACAGATCCACTTGGTCTGCGTTAATTGCTGGATGA
Protein sequence

>Msa0027240

MAPRPNPKIAAALQAMTEFGIPEAKVKRALKKLLKLFDKNWQLIEEENYRALLDAIFEEGDDFEEPEPQKKNKRVNEEEMEAEEAPLNVESARPLKRLRLRGQENNSPSSASSPLKKSHIEKDTALEGGSSQQPRNNAVSSDVNGRVAARPMRDASYDRGKQPASPHASYELTVPKSEPVDEEDYERRPLAMVPPEPSSLRRYSRKNGVTEKQGAHVSMTPSHHNTRKEVVSDVVIASSAQGEVKLSLSCSSALQGPDFRMPTQEQLLKMMEDKCLRSYKIIDPNFSVGKMLRDICDCMLEFSTDSNDNSQEGSMSKSSIDVSKESEVDGTPAIGGSKDLDTGSHSSNGSIQVNSFSALVSPRGPFSPAHQSSLDDAVLVSEMNRTIDIPQSDVRMQPEDPVSPNSLSLVVVPHHQSTEDRIRSYHDVSDLTKGEENNQISWVNESSTNDFPPPFNYIPQNLVFRDASVNISLSRIGAEDSCSCIGSCILLSDTHCACTYKTGGKFAYTAQGLIKEEFLEECIAISHNPQQHCFYCKDCPLERSKSDGCLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITYNLQVFFTSEGKGWGLRTLEELPKGAFVCEFAGEILTIKELHERNMKCAENGKSTYPVLLDAAWDSTFVKDEEALCLDAASFGNIARFINHRCSDANLVEIPIQIECPDHYYYHFALFTTRNIAAHEELTWDYGIDFDDHNQPVKLFQCKCGSKFCRNMKRSNRSTWSALIAG*