Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032510 | sp|Q9FT74|RQL1_ARATH | 66.558 | 616 | 179 | 5 | 14 | 613 | 2 | 606 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032510 | Msa0173080 | 0.937281 | 4.472746e-98 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032510 | MtrunA17_Chr1g0192571 | 95.610 | 615 | 17 | 2 | 1 | 615 | 1 | 605 | 0.0 | 1215 |
| Msa0032510 | MtrunA17_Chr2g0277541 | 45.455 | 440 | 211 | 7 | 191 | 615 | 395 | 820 | 1.50e-125 | 398 |
| Msa0032510 | MtrunA17_Chr5g0409101 | 40.225 | 445 | 233 | 10 | 170 | 610 | 60 | 475 | 4.05e-103 | 328 |
| Msa0032510 | MtrunA17_Chr2g0300871 | 42.043 | 421 | 216 | 9 | 200 | 610 | 38 | 440 | 3.82e-102 | 326 |
| Msa0032510 | MtrunA17_Chr3g0108851 | 37.947 | 419 | 221 | 12 | 200 | 610 | 12 | 399 | 2.13e-74 | 255 |
| Msa0032510 | MtrunA17_Chr8g0377041 | 37.260 | 365 | 197 | 10 | 186 | 539 | 253 | 596 | 9.14e-56 | 203 |
| Msa0032510 | MtrunA17_Chr1g0192101 | 40.088 | 227 | 102 | 7 | 200 | 413 | 160 | 365 | 5.25e-37 | 147 |
| Msa0032510 | MtrunA17_Chr1g0192101 | 33.796 | 216 | 122 | 6 | 395 | 610 | 478 | 672 | 4.07e-24 | 107 |
| Msa0032510 | MtrunA17_Chr2g0293631 | 24.324 | 370 | 235 | 12 | 200 | 552 | 515 | 856 | 1.25e-13 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032510 | AT3G05740.1 | 66.558 | 616 | 179 | 5 | 14 | 613 | 2 | 606 | 0.0 | 825 |
| Msa0032510 | AT3G05740.2 | 69.472 | 511 | 142 | 4 | 106 | 613 | 22 | 521 | 0.0 | 721 |
| Msa0032510 | AT1G10930.1 | 44.035 | 461 | 231 | 6 | 168 | 615 | 417 | 863 | 1.97e-124 | 396 |
| Msa0032510 | AT1G31360.8 | 40.275 | 437 | 230 | 10 | 178 | 610 | 66 | 475 | 5.58e-105 | 327 |
| Msa0032510 | AT1G31360.4 | 40.275 | 437 | 230 | 10 | 178 | 610 | 66 | 475 | 5.58e-105 | 327 |
| Msa0032510 | AT1G31360.7 | 40.275 | 437 | 230 | 10 | 178 | 610 | 66 | 475 | 1.69e-104 | 327 |
| Msa0032510 | AT1G31360.5 | 40.275 | 437 | 230 | 10 | 178 | 610 | 66 | 475 | 1.98e-104 | 327 |
| Msa0032510 | AT1G31360.6 | 40.275 | 437 | 230 | 10 | 178 | 610 | 66 | 475 | 1.03e-103 | 328 |
| Msa0032510 | AT1G31360.1 | 40.271 | 442 | 223 | 10 | 178 | 610 | 66 | 475 | 3.82e-103 | 328 |
| Msa0032510 | AT1G31360.3 | 40.275 | 437 | 230 | 10 | 178 | 610 | 100 | 509 | 8.03e-103 | 328 |
| Msa0032510 | AT4G35740.1 | 43.099 | 413 | 216 | 9 | 200 | 610 | 32 | 427 | 2.27e-101 | 324 |
| Msa0032510 | AT1G31360.2 | 41.005 | 378 | 185 | 9 | 242 | 610 | 2 | 350 | 2.64e-88 | 286 |
| Msa0032510 | AT4G35740.2 | 42.151 | 344 | 181 | 8 | 269 | 610 | 7 | 334 | 2.52e-76 | 255 |
| Msa0032510 | AT1G27880.2 | 36.056 | 355 | 203 | 9 | 198 | 547 | 263 | 598 | 2.29e-53 | 196 |
| Msa0032510 | AT1G27880.1 | 36.056 | 355 | 203 | 9 | 198 | 547 | 263 | 598 | 2.33e-53 | 196 |
| Msa0032510 | AT5G27680.5 | 39.381 | 226 | 105 | 6 | 200 | 413 | 34 | 239 | 5.10e-37 | 147 |
| Msa0032510 | AT5G27680.5 | 38.857 | 175 | 93 | 6 | 438 | 610 | 371 | 533 | 2.62e-25 | 111 |
| Msa0032510 | AT5G27680.6 | 39.381 | 226 | 105 | 6 | 200 | 413 | 164 | 369 | 6.61e-37 | 147 |
| Msa0032510 | AT5G27680.1 | 39.381 | 226 | 105 | 6 | 200 | 413 | 164 | 369 | 6.95e-37 | 147 |
| Msa0032510 | AT5G27680.1 | 38.857 | 175 | 93 | 6 | 438 | 610 | 501 | 663 | 2.42e-25 | 112 |
| Msa0032510 | AT5G27680.4 | 39.381 | 226 | 105 | 6 | 200 | 413 | 164 | 369 | 6.95e-37 | 147 |
| Msa0032510 | AT5G27680.4 | 38.857 | 175 | 93 | 6 | 438 | 610 | 501 | 663 | 2.42e-25 | 112 |
| Msa0032510 | AT5G27680.3 | 39.381 | 226 | 105 | 6 | 200 | 413 | 164 | 369 | 6.95e-37 | 147 |
| Msa0032510 | AT5G27680.3 | 38.857 | 175 | 93 | 6 | 438 | 610 | 501 | 663 | 2.42e-25 | 112 |
| Msa0032510 | AT5G27680.2 | 39.381 | 226 | 105 | 6 | 200 | 413 | 164 | 369 | 6.95e-37 | 147 |
| Msa0032510 | AT5G27680.2 | 38.857 | 175 | 93 | 6 | 438 | 610 | 501 | 663 | 2.42e-25 | 112 |
| Msa0032510 | AT3G06480.1 | 23.040 | 421 | 270 | 14 | 158 | 560 | 420 | 804 | 9.01e-12 | 68.9 |
| Msa0032510 | AT2G33730.1 | 24.745 | 392 | 234 | 14 | 182 | 538 | 314 | 679 | 3.97e-11 | 66.6 |
Find 138 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCGGAAACCAATCATTTAT+TGG | 0.185337 | 1_1:-59681090 | Msa0032510:CDS |
| CCCAATAAATGATTGGTTTC+CGG | 0.199025 | 1_1:+59681089 | None:intergenic |
| TCCCTTACTTTCACTCATTC+AGG | 0.226621 | 1_1:-59681431 | Msa0032510:CDS |
| CAAAATGCTGTAGTATTTCT+TGG | 0.258825 | 1_1:-59677517 | Msa0032510:three_prime_UTR |
| GCCAATGGGGACATGATTTC+CGG | 0.262665 | 1_1:-59679634 | Msa0032510:CDS |
| GCAACAGTACTGTGAATTAA+AGG | 0.283775 | 1_1:-59678230 | Msa0032510:intron |
| AACTTGTTCCGTTGTTTCTT+AGG | 0.287375 | 1_1:+59682869 | None:intergenic |
| CCGGAAACCAATCATTTATT+GGG | 0.287539 | 1_1:-59681089 | Msa0032510:CDS |
| CGGCCTGATTATCGGGGATT+AGG | 0.296773 | 1_1:-59679614 | Msa0032510:CDS |
| CTTGCTTTCATTCAAAGTTT+TGG | 0.298169 | 1_1:+59677549 | None:intergenic |
| CGCAAGATTGAAAATTGAAT+TGG | 0.302772 | 1_1:-59683345 | Msa0032510:five_prime_UTR |
| TTGGGAAATGTTGTTATCTT+TGG | 0.306162 | 1_1:-59681875 | Msa0032510:CDS |
| AACTCTCAGGGACAACTTGC+AGG | 0.307906 | 1_1:-59680945 | Msa0032510:intron |
| ATAACACTTAACCTCAAGTT+TGG | 0.310775 | 1_1:-59681400 | Msa0032510:CDS |
| ATAGGATTGAAGCTACTAAT+TGG | 0.317162 | 1_1:+59677774 | None:intergenic |
| GTATGTGCAACTATTGCTTT+TGG | 0.328466 | 1_1:-59679110 | Msa0032510:CDS |
| GAATGAGAAATGTAAAATAA+AGG | 0.338559 | 1_1:-59679213 | Msa0032510:CDS |
| GGCGCTAGATGATATTGAAT+TGG | 0.341103 | 1_1:-59681894 | Msa0032510:CDS |
| AAAAGGTCCATTGAGATGTT+TGG | 0.351374 | 1_1:+59677722 | None:intergenic |
| AAACGGCCAAGGATATAAAA+AGG | 0.351546 | 1_1:-59678290 | Msa0032510:CDS |
| AGCTGTCCAAGCTGCTTTAG+TGG | 0.354506 | 1_1:+59679317 | None:intergenic |
| ATTCTAATTACCTCACGAAC+TGG | 0.355721 | 1_1:+59679530 | None:intergenic |
| ATCACTTCATACTTCAAATT+CGG | 0.357543 | 1_1:+59679356 | None:intergenic |
| GAAGCAACAACAACACGATT+TGG | 0.360900 | 1_1:-59683264 | Msa0032510:CDS |
| TTGGAGAACAGCTGCGGCTT+GGG | 0.368836 | 1_1:+59681339 | None:intergenic |
| CATTCAACACGTGTTTGCTT+TGG | 0.371800 | 1_1:-59677835 | Msa0032510:three_prime_UTR |
| TGATTTCCGGCCTGATTATC+GGG | 0.374955 | 1_1:-59679621 | Msa0032510:CDS |
| GAAAGCTATTATCAAGAATC+AGG | 0.385054 | 1_1:-59678397 | Msa0032510:CDS |
| CGGAACAAGTTTGTGGAGTT+GGG | 0.387829 | 1_1:-59682857 | Msa0032510:CDS |
| GATCCTAATCCCCGATAATC+AGG | 0.390569 | 1_1:+59679611 | None:intergenic |
| CTCTACTAAAATCCTTCTTC+TGG | 0.394859 | 1_1:+59678329 | None:intergenic |
| TGGTACAAATTACAAAATCT+AGG | 0.397316 | 1_1:+59677569 | None:intergenic |
| TTAGAATCCCAATAAATGAT+TGG | 0.397742 | 1_1:+59681082 | None:intergenic |
| ATACTAACTTTGATGTTTCA+AGG | 0.400385 | 1_1:-59682814 | Msa0032510:CDS |
| TATAGTACCACTGAGTTTGT+AGG | 0.402046 | 1_1:+59682782 | None:intergenic |
| ATGATTTCCGGCCTGATTAT+CGG | 0.407709 | 1_1:-59679622 | Msa0032510:CDS |
| TTGATGAGGCACACTGTGTT+AGG | 0.415168 | 1_1:-59680914 | Msa0032510:intron |
| ACCATAAAGACAACACAAAA+AGG | 0.416267 | 1_1:+59677705 | None:intergenic |
| ATGGGAAGATGTACACGAAA+TGG | 0.417081 | 1_1:-59682978 | Msa0032510:CDS |
| CTACTGTAACTCCGGGTTGA+AGG | 0.417144 | 1_1:+59681461 | None:intergenic |
| GAATGCTGTCACCGCATGAT+AGG | 0.419087 | 1_1:+59677756 | None:intergenic |
| GAGATGTTTGGAACCACGTC+AGG | 0.421298 | 1_1:+59677734 | None:intergenic |
| TGGTTTCCGGCAATTCTCTC+AGG | 0.421787 | 1_1:+59681102 | None:intergenic |
| TCAAGCATGTAAAGCAGCTT+TGG | 0.427504 | 1_1:-59681825 | Msa0032510:CDS |
| ACTCCGGGTTGAAGGGTTGC+TGG | 0.427909 | 1_1:+59681469 | None:intergenic |
| GTGACACCTGAGAGAATTGC+CGG | 0.429060 | 1_1:-59681108 | Msa0032510:CDS |
| ATTCTTATGCCCACTGGTGG+TGG | 0.438985 | 1_1:-59681785 | Msa0032510:CDS |
| TGGCAAATCTCTTTGCTATC+AGG | 0.441663 | 1_1:-59681765 | Msa0032510:intron |
| ATCCTGAATGAGTGAAAGTA+AGG | 0.442420 | 1_1:+59681429 | None:intergenic |
| GACCGTCTCGTCTCTCTCTA+CGG | 0.444680 | 1_1:-59683167 | Msa0032510:intron |
| GTGAATCTCGCCTTAGCTCT+TGG | 0.445529 | 1_1:+59681320 | None:intergenic |
| GCAGCTTGGACAGCTACTAA+TGG | 0.445735 | 1_1:-59679309 | Msa0032510:CDS |
| AAATCCTCCTTTGCTGCAAA+AGG | 0.447429 | 1_1:-59681950 | Msa0032510:CDS |
| CTTGGAGAACAGCTGCGGCT+TGG | 0.450143 | 1_1:+59681338 | None:intergenic |
| GGCGCAAGACACGGAGGAAT+GGG | 0.450232 | 1_1:-59682996 | Msa0032510:CDS |
| GATAGAAAGAACTGCAAATA+CGG | 0.451145 | 1_1:-59677932 | Msa0032510:CDS |
| ACGGAACAAGTTTGTGGAGT+TGG | 0.452790 | 1_1:-59682858 | Msa0032510:CDS |
| CATTGCTCTATACCAGAAGA+AGG | 0.455964 | 1_1:-59678341 | Msa0032510:CDS |
| GCGCTAGATGATATTGAATT+GGG | 0.462176 | 1_1:-59681893 | Msa0032510:CDS |
| ATTATTATTCAAGGTGATGA+TGG | 0.462579 | 1_1:-59683079 | Msa0032510:intron |
| GAGTTGCTGTTCAAAAGAAA+TGG | 0.464725 | 1_1:-59679154 | Msa0032510:CDS |
| TCTCAGTTATGAAGAATTGA+AGG | 0.464882 | 1_1:-59681915 | Msa0032510:CDS |
| TATCAAGAATCAGGAAGGGC+TGG | 0.472191 | 1_1:-59678388 | Msa0032510:CDS |
| AAAATCAAGTAGCGCGGGAA+TGG | 0.480014 | 1_1:-59683315 | Msa0032510:exon |
| TACTGTAACTCCGGGTTGAA+GGG | 0.482787 | 1_1:+59681462 | None:intergenic |
| AGCGTATTACCATGCTGGCT+TGG | 0.484130 | 1_1:-59679189 | Msa0032510:CDS |
| CGGCGCAAGACACGGAGGAA+TGG | 0.485105 | 1_1:-59682997 | Msa0032510:CDS |
| GTGCTTGACACGCGCGGTGA+TGG | 0.485473 | 1_1:-59682926 | Msa0032510:CDS |
| ATCAGTTTAGCTCTCGATCT+CGG | 0.488313 | 1_1:-59683221 | Msa0032510:CDS |
| CTTTCCACGTGTTCCTGTCA+TGG | 0.490156 | 1_1:-59679576 | Msa0032510:CDS |
| CAAACACTACTTGAACACTT+TGG | 0.494139 | 1_1:-59677965 | Msa0032510:CDS |
| GAAAAGTTAGAATAGCTCTC+TGG | 0.502597 | 1_1:-59677673 | Msa0032510:three_prime_UTR |
| AGATACAACTACTGTAACTC+CGG | 0.502948 | 1_1:+59681453 | None:intergenic |
| AAGTAGCGCGGGAATGGAAG+TGG | 0.505431 | 1_1:-59683309 | Msa0032510:exon |
| GAAACAACGGAACAAGTTTG+TGG | 0.524272 | 1_1:-59682864 | Msa0032510:CDS |
| GTTGTATGCATGATAAGAAA+CGG | 0.527572 | 1_1:-59678307 | Msa0032510:CDS |
| TATAGAGCAATGCAAACTGC+TGG | 0.530222 | 1_1:+59678352 | None:intergenic |
| GTTCAAGTAGTGTTTGTCTC+CGG | 0.535138 | 1_1:+59677972 | None:intergenic |
| GTGGCGGTCAATGCCATGAC+AGG | 0.535402 | 1_1:+59679563 | None:intergenic |
| AACTGGGTGAGTTGCAGTGG+CGG | 0.535579 | 1_1:+59679547 | None:intergenic |
| CGTGGTTCCAAACATCTCAA+TGG | 0.535830 | 1_1:-59677729 | Msa0032510:three_prime_UTR |
| AAGTGGCATCACTCAGGGCT+CGG | 0.537050 | 1_1:-59681996 | Msa0032510:CDS |
| CAGCTGTTCTCCAAGAGCTA+AGG | 0.539604 | 1_1:-59681330 | Msa0032510:CDS |
| TACTAACTTTGATGTTTCAA+GGG | 0.539715 | 1_1:-59682813 | Msa0032510:CDS |
| TGGTAGAAGTGGCATCACTC+AGG | 0.540653 | 1_1:-59682002 | Msa0032510:CDS |
| CTTTCAAGAACAATTGCATG+TGG | 0.541349 | 1_1:+59679392 | None:intergenic |
| TTGAACAGCAACTCTCTGGC+GGG | 0.542476 | 1_1:+59679163 | None:intergenic |
| GGCGGGCAGCCAAGCCAGCA+TGG | 0.542973 | 1_1:+59679180 | None:intergenic |
| TGAATGTTTAGGATGAATGC+CGG | 0.543032 | 1_1:-59677991 | Msa0032510:intron |
| GAAATGGAATCGCAAGCTGT+TGG | 0.548293 | 1_1:-59682962 | Msa0032510:CDS |
| TCTAAAATGCATGCATCAGA+AGG | 0.553934 | 1_1:-59681064 | Msa0032510:intron |
| ACGAACTGGGTGAGTTGCAG+TGG | 0.556223 | 1_1:+59679544 | None:intergenic |
| TTTATTCTTATGCCCACTGG+TGG | 0.556990 | 1_1:-59681788 | Msa0032510:CDS |
| CGGTGACAGCATTCCTGACG+TGG | 0.558121 | 1_1:-59677747 | Msa0032510:three_prime_UTR |
| GCTATTATCAAGAATCAGGA+AGG | 0.558903 | 1_1:-59678393 | Msa0032510:CDS |
| TTTGAACAGCAACTCTCTGG+CGG | 0.561773 | 1_1:+59679162 | None:intergenic |
| TAGCAGGTATTCCAAACTTG+AGG | 0.570780 | 1_1:+59681389 | None:intergenic |
| GCCGGAAATCATGTCCCCAT+TGG | 0.571092 | 1_1:+59679633 | None:intergenic |
| TGGAAGTGGGAAACAGTAGC+AGG | 0.572342 | 1_1:-59683295 | Msa0032510:CDS |
| AAGGCAGCGTATTACCATGC+TGG | 0.576504 | 1_1:-59679194 | Msa0032510:CDS |
| AAGAGATTTGCCACCACCAG+TGG | 0.577435 | 1_1:+59681775 | None:intergenic |
| AGACGAGACGGTCAAAACAT+TGG | 0.581676 | 1_1:+59683177 | None:intergenic |
| TTCTAATTACCTCACGAACT+GGG | 0.585727 | 1_1:+59679531 | None:intergenic |
| TACTAATTGGAGCTTCACAT+TGG | 0.587265 | 1_1:+59677787 | None:intergenic |
| AAGGAACCACTAAAGCAGCT+TGG | 0.588455 | 1_1:-59679323 | Msa0032510:CDS |
| GTGTTATAGAATGGTAGAAG+TGG | 0.590785 | 1_1:-59682013 | Msa0032510:intron |
| AAAGAAATGGCACGATGGAG+AGG | 0.599308 | 1_1:-59679141 | Msa0032510:CDS |
| CTTCCAGCAACCCTTCAACC+CGG | 0.599992 | 1_1:-59681472 | Msa0032510:CDS |
| TGAAGTGATTGTTAAGACAA+AGG | 0.602910 | 1_1:-59679342 | Msa0032510:CDS |
| TCCTGAATGAGTGAAAGTAA+GGG | 0.604891 | 1_1:+59681430 | None:intergenic |
| GTCTTGAGACAGTTATCACA+AGG | 0.608540 | 1_1:+59677902 | None:intergenic |
| TTACATGCTTGATGCTGCAG+TGG | 0.613311 | 1_1:+59681836 | None:intergenic |
| CTAATCCCCGATAATCAGGC+CGG | 0.622423 | 1_1:+59679615 | None:intergenic |
| GGTAGAAGTGGCATCACTCA+GGG | 0.624179 | 1_1:-59682001 | Msa0032510:CDS |
| GATTTCCGGCCTGATTATCG+GGG | 0.626285 | 1_1:-59679620 | Msa0032510:CDS |
| TGCAACTCACCCAGTTCGTG+AGG | 0.628045 | 1_1:-59679540 | Msa0032510:intron |
| GGGTTCTAGTGACGATGAGG+AGG | 0.628459 | 1_1:-59682837 | Msa0032510:CDS |
| GATACAACTACTGTAACTCC+GGG | 0.636084 | 1_1:+59681454 | None:intergenic |
| AGTAGCGCGGGAATGGAAGT+GGG | 0.637797 | 1_1:-59683308 | Msa0032510:exon |
| AATCACGTGCTTGACACGCG+CGG | 0.639782 | 1_1:-59682932 | Msa0032510:CDS |
| TAGCTCTTGGAGAACAGCTG+CGG | 0.652447 | 1_1:+59681333 | None:intergenic |
| TGCATGATAAGAAACGGCCA+AGG | 0.654530 | 1_1:-59678301 | Msa0032510:CDS |
| AGAGATTTGCCACCACCAGT+GGG | 0.661715 | 1_1:+59681776 | None:intergenic |
| ACGGTCAAAACATTGGTTTG+CGG | 0.666254 | 1_1:+59683184 | None:intergenic |
| GTTGGGTTCTAGTGACGATG+AGG | 0.673093 | 1_1:-59682840 | Msa0032510:CDS |
| CTATTATCAAGAATCAGGAA+GGG | 0.675476 | 1_1:-59678392 | Msa0032510:CDS |
| TACCGTAGAGAGAGACGAGA+CGG | 0.684216 | 1_1:+59683165 | None:intergenic |
| GTAGCTTCAATCCTATCATG+CGG | 0.684431 | 1_1:-59677767 | Msa0032510:three_prime_UTR |
| GGAGTCGGCGCAAGACACGG+AGG | 0.687461 | 1_1:-59683002 | Msa0032510:CDS |
| GTTCAAAAGAAATGGCACGA+TGG | 0.689785 | 1_1:-59679146 | Msa0032510:CDS |
| ACGATTCGCCTAAGAAACAA+CGG | 0.697214 | 1_1:-59682877 | Msa0032510:CDS |
| ATGATACACAAGAATAGACA+AGG | 0.699589 | 1_1:+59681295 | None:intergenic |
| AATGCCATGACAGGAACACG+TGG | 0.700267 | 1_1:+59679572 | None:intergenic |
| TTTATCACTGTTGAACACTG+CGG | 0.701936 | 1_1:-59683049 | Msa0032510:CDS |
| GATCGTTTCAAGAGTCAGTG+TGG | 0.718119 | 1_1:-59679287 | Msa0032510:CDS |
| TCAACATCCTACAAACTCAG+TGG | 0.729434 | 1_1:-59682789 | Msa0032510:intron |
| ACATACAAAAGCTTGCACGA+AGG | 0.751325 | 1_1:+59681129 | None:intergenic |
| TCTTGAGACAGTTATCACAA+GGG | 0.756422 | 1_1:+59677903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATTAGTAATTAAAATTT+TGG | + | chr1_1:59680174-59680193 | None:intergenic | 10.0% |
| !! | TAAATGATACTAATACTAAT+AGG | + | chr1_1:59679654-59679673 | None:intergenic | 15.0% |
| !! | ATTTAAAAAAAAAACCTTTC+AGG | - | chr1_1:59679669-59679688 | Msa0032510:intron | 15.0% |
| !! | TAGTGATATCTTAAAATTAA+AGG | - | chr1_1:59680237-59680256 | Msa0032510:intron | 15.0% |
| !! | ATATCTTAAAATTAAAGGTA+TGG | - | chr1_1:59680242-59680261 | Msa0032510:intron | 15.0% |
| !! | TTCAAAAAGTTATGAAATTT+AGG | + | chr1_1:59680272-59680291 | None:intergenic | 15.0% |
| !!! | TATAAAACATTTTCTTCTTT+AGG | - | chr1_1:59680526-59680545 | Msa0032510:intron | 15.0% |
| !!! | AGTAACACTATAATATTTTA+TGG | + | chr1_1:59680899-59680918 | None:intergenic | 15.0% |
| !!! | TAGTAAATTGCTATTATATA+TGG | - | chr1_1:59681380-59681399 | Msa0032510:CDS | 15.0% |
| !!! | ATTTTTAGTGATGAATTTTA+CGG | - | chr1_1:59682380-59682399 | Msa0032510:intron | 15.0% |
| !! | AATAATTATATGAATCCAAA+TGG | + | chr1_1:59682844-59682863 | None:intergenic | 15.0% |
| !! | TAAGCGATTATTATTATTCA+AGG | - | chr1_1:59677800-59677819 | Msa0032510:three_prime_UTR | 20.0% |
| !!! | ATTCACAAATATTTGAAACT+GGG | + | chr1_1:59678166-59678185 | None:intergenic | 20.0% |
| !!! | TATTCACAAATATTTGAAAC+TGG | + | chr1_1:59678167-59678186 | None:intergenic | 20.0% |
| !!! | TTTACCTTTTGTTATAGAAA+TGG | - | chr1_1:59678489-59678508 | Msa0032510:intron | 20.0% |
| !! | TATTCCATTTCTATAACAAA+AGG | + | chr1_1:59678496-59678515 | None:intergenic | 20.0% |
| !! | AGATAGAGAAGAATATAAAA+TGG | - | chr1_1:59678696-59678715 | Msa0032510:intron | 20.0% |
| !! | TTTGTTTAATCTATTTGCAT+TGG | - | chr1_1:59678786-59678805 | Msa0032510:intron | 20.0% |
| !! | CAAAACAATATAATCATCAT+TGG | + | chr1_1:59679231-59679250 | None:intergenic | 20.0% |
| !! | AAGCACAAAATAAAATTAAC+AGG | + | chr1_1:59679392-59679411 | None:intergenic | 20.0% |
| !!! | TAATTACTAATGAAGTATCA+TGG | - | chr1_1:59680180-59680199 | Msa0032510:intron | 20.0% |
| !! | AAAAGTTATGAAATTTAGGA+AGG | + | chr1_1:59680268-59680287 | None:intergenic | 20.0% |
| !!! | GAAGAAAATGTTTTATATTC+AGG | + | chr1_1:59680523-59680542 | None:intergenic | 20.0% |
| !!! | GTTATCTGAAATTAAGTTAA+GGG | + | chr1_1:59680622-59680641 | None:intergenic | 20.0% |
| !!! | TTCAAATCGTAGAAATTTTT+CGG | - | chr1_1:59680711-59680730 | Msa0032510:intron | 20.0% |
| !! | CTAAATTGTTACCTAAAATT+AGG | - | chr1_1:59680848-59680867 | Msa0032510:intron | 20.0% |
| !!! | ATATTATAGTGTTACTACAA+AGG | - | chr1_1:59680903-59680922 | Msa0032510:intron | 20.0% |
| !! | GAATGAGAAATGTAAAATAA+AGG | - | chr1_1:59681675-59681694 | Msa0032510:intron | 20.0% |
| !! | TTATAAAGAACATGTATACA+AGG | - | chr1_1:59682080-59682099 | Msa0032510:intron | 20.0% |
| !! | AGTTTATTACCATTGAAAAT+GGG | - | chr1_1:59682796-59682815 | Msa0032510:CDS | 20.0% |
| !!! | ATTTTTCAGATCTAATTTTG+AGG | - | chr1_1:59683248-59683267 | Msa0032510:CDS | 20.0% |
| ! | ATTATTATTCAAGGTGATGA+TGG | - | chr1_1:59677809-59677828 | Msa0032510:three_prime_UTR | 25.0% |
| ! | ATACTAACTTTGATGTTTCA+AGG | - | chr1_1:59678074-59678093 | Msa0032510:intron | 25.0% |
| ! | TACTAACTTTGATGTTTCAA+GGG | - | chr1_1:59678075-59678094 | Msa0032510:intron | 25.0% |
| ! | CTATGGATGAAAAATTAGTA+TGG | - | chr1_1:59678583-59678602 | Msa0032510:intron | 25.0% |
| ! | TATTCTAATGCTTATATGTC+AGG | - | chr1_1:59678616-59678635 | Msa0032510:intron | 25.0% |
| ! | AAAATGGATGTAAGCATATT+TGG | - | chr1_1:59678712-59678731 | Msa0032510:intron | 25.0% |
| !! | TAACTTGTGAAAAAACTTTC+AGG | - | chr1_1:59678745-59678764 | Msa0032510:intron | 25.0% |
| ! | TGAAATAGTGTGTTATAGAA+TGG | - | chr1_1:59678866-59678885 | Msa0032510:intron | 25.0% |
| !!! | AAAGGAGGATTTTATTTTTC+TGG | + | chr1_1:59678930-59678949 | None:intergenic | 25.0% |
| ! | TCATTGGTATTACTATTAAG+TGG | + | chr1_1:59679215-59679234 | None:intergenic | 25.0% |
| !!! | CAACTTTAGCATTTTTTAGA+AGG | + | chr1_1:59679270-59679289 | None:intergenic | 25.0% |
| ! | TTCTTTGTATCAAACAGTAT+TGG | - | chr1_1:59679325-59679344 | Msa0032510:CDS | 25.0% |
| ! | TGAGAATTTAAAAAAGTAGC+AGG | + | chr1_1:59679518-59679537 | None:intergenic | 25.0% |
| ! | TAAATCAATTGTTACCTGAA+AGG | + | chr1_1:59679686-59679705 | None:intergenic | 25.0% |
| ! | TTAGAATCCCAATAAATGAT+TGG | + | chr1_1:59679809-59679828 | None:intergenic | 25.0% |
| !! | TCATAACTTTTTGAACTGAA+TGG | - | chr1_1:59680277-59680296 | Msa0032510:intron | 25.0% |
| !! | ATTTTCATCAATCCAAATCA+CGG | + | chr1_1:59680578-59680597 | None:intergenic | 25.0% |
| !! | TGATTTGGATTGATGAAAAT+AGG | - | chr1_1:59680578-59680597 | Msa0032510:intron | 25.0% |
| !! | CGTTATCTGAAATTAAGTTA+AGG | + | chr1_1:59680623-59680642 | None:intergenic | 25.0% |
| !! | TCAAATCGTAGAAATTTTTC+GGG | - | chr1_1:59680712-59680731 | Msa0032510:intron | 25.0% |
| !! | ATCTTTTTCTTACGTCATTT+TGG | + | chr1_1:59680822-59680841 | None:intergenic | 25.0% |
| ! | TGTTACCTAAAATTAGGTTA+AGG | - | chr1_1:59680854-59680873 | Msa0032510:intron | 25.0% |
| ! | GTTACCTAAAATTAGGTTAA+GGG | - | chr1_1:59680855-59680874 | Msa0032510:intron | 25.0% |
| !! | CAATTTAAGGCAAAGAAAAA+GGG | + | chr1_1:59681440-59681459 | None:intergenic | 25.0% |
| ! | ATCACTTCATACTTCAAATT+CGG | + | chr1_1:59681535-59681554 | None:intergenic | 25.0% |
| !!! | TTTTATGATTGACTTTGTTC+AGG | - | chr1_1:59681879-59681898 | Msa0032510:CDS | 25.0% |
| ! | TAGTTAATAAACAAGCTGAA+TGG | - | chr1_1:59681958-59681977 | Msa0032510:CDS | 25.0% |
| !! | TGGTCTTTTTATCATTTTGT+AGG | + | chr1_1:59682029-59682048 | None:intergenic | 25.0% |
| ! | AAAATTCTGCAAAATTGCAA+AGG | + | chr1_1:59682173-59682192 | None:intergenic | 25.0% |
| !! | AGATTTTGCATTTATACTTG+AGG | + | chr1_1:59682224-59682243 | None:intergenic | 25.0% |
| ! | ACATTCAAATGCTGAATTAA+CGG | + | chr1_1:59682311-59682330 | None:intergenic | 25.0% |
| !!! | TTGATTTTGACATTGTATTG+TGG | + | chr1_1:59682469-59682488 | None:intergenic | 25.0% |
| !! | AACTTTCCTTTTTATATCCT+TGG | + | chr1_1:59682607-59682626 | None:intergenic | 25.0% |
| ! | CAGTTTATTACCATTGAAAA+TGG | - | chr1_1:59682795-59682814 | Msa0032510:CDS | 25.0% |
| !! | AATTTTTCACCCATTTTATC+TGG | - | chr1_1:59682872-59682891 | Msa0032510:CDS | 25.0% |
| ! | ACATTCAAACCAGATAAAAT+GGG | + | chr1_1:59682884-59682903 | None:intergenic | 25.0% |
| ! | AACATTCAAACCAGATAAAA+TGG | + | chr1_1:59682885-59682904 | None:intergenic | 25.0% |
| !! | TTTATCTGGTTTGAATGTTT+AGG | - | chr1_1:59682886-59682905 | Msa0032510:CDS | 25.0% |
| !!! | TTTTACTTTTGTATACTCTG+CGG | + | chr1_1:59683290-59683309 | None:intergenic | 25.0% |
| ! | TGGTACAAATTACAAAATCT+AGG | + | chr1_1:59683322-59683341 | None:intergenic | 25.0% |
| CGCAAGATTGAAAATTGAAT+TGG | - | chr1_1:59677543-59677562 | Msa0032510:three_prime_UTR | 30.0% | |
| AGAAAAAAAATCAAGTAGCG+CGG | - | chr1_1:59677567-59677586 | Msa0032510:three_prime_UTR | 30.0% | |
| GAGTGAAAATGAAAGTGAAA+TGG | + | chr1_1:59677761-59677780 | None:intergenic | 30.0% | |
| ACAATCACATGTATCAGTAT+CGG | - | chr1_1:59678246-59678265 | Msa0032510:CDS | 30.0% | |
| CATTTATGTTTCCTCACTTA+AGG | + | chr1_1:59678340-59678359 | None:intergenic | 30.0% | |
| CTTAAGTGAGGAAACATAAA+TGG | - | chr1_1:59678338-59678357 | Msa0032510:CDS | 30.0% | |
| ACTTATACCATCAGTGTTTA+TGG | - | chr1_1:59678525-59678544 | Msa0032510:intron | 30.0% | |
| AATTAAGCTGTTTACCGAAA+CGG | - | chr1_1:59678559-59678578 | Msa0032510:intron | 30.0% | |
| TCTCAGTTATGAAGAATTGA+AGG | - | chr1_1:59678973-59678992 | Msa0032510:intron | 30.0% | |
| TTGGGAAATGTTGTTATCTT+TGG | - | chr1_1:59679013-59679032 | Msa0032510:intron | 30.0% | |
| ACGTGCAAAAAGAAAAATCA+GGG | + | chr1_1:59679167-59679186 | None:intergenic | 30.0% | |
| AACGTGCAAAAAGAAAAATC+AGG | + | chr1_1:59679168-59679187 | None:intergenic | 30.0% | |
| ATAACACTTAACCTCAAGTT+TGG | - | chr1_1:59679488-59679507 | Msa0032510:intron | 30.0% | |
| ATGATACACAAGAATAGACA+AGG | + | chr1_1:59679596-59679615 | None:intergenic | 30.0% | |
| ! | TATTTTCGTGGGAAAGTTAT+AGG | + | chr1_1:59679630-59679649 | None:intergenic | 30.0% |
| !! | TACTAATAGGCTATTTTCGT+GGG | + | chr1_1:59679641-59679660 | None:intergenic | 30.0% |
| !! | ATACTAATAGGCTATTTTCG+TGG | + | chr1_1:59679642-59679661 | None:intergenic | 30.0% |
| !!! | TGTCATTTTGAATTGAACTC+TGG | - | chr1_1:59680211-59680230 | Msa0032510:intron | 30.0% |
| TATAAAGAACAGCATGTGAA+AGG | - | chr1_1:59680324-59680343 | Msa0032510:intron | 30.0% | |
| ATAAAGAACAGCATGTGAAA+GGG | - | chr1_1:59680325-59680344 | Msa0032510:intron | 30.0% | |
| TTATTACAAGAACCGTGATT+TGG | - | chr1_1:59680563-59680582 | Msa0032510:intron | 30.0% | |
| AATAGGCAAAATTACTTCTG+TGG | - | chr1_1:59680595-59680614 | Msa0032510:intron | 30.0% | |
| CTTAATTTCAGATAACGATG+TGG | - | chr1_1:59680626-59680645 | Msa0032510:intron | 30.0% | |
| !!! | TTTTTTACTTCCCGTCATAT+TGG | - | chr1_1:59680654-59680673 | Msa0032510:intron | 30.0% |
| !! | AGCTGGTCTTAAATATGATA+TGG | + | chr1_1:59680738-59680757 | None:intergenic | 30.0% |
| TTGAAATCCATATCCAAACA+TGG | - | chr1_1:59680788-59680807 | Msa0032510:intron | 30.0% | |
| TGAAATCCATATCCAAACAT+GGG | - | chr1_1:59680789-59680808 | Msa0032510:intron | 30.0% | |
| ! | GTTAAAGTACCAAGTAGTAA+AGG | - | chr1_1:59680939-59680958 | Msa0032510:CDS | 30.0% |
| !!! | GGGAATGGAGATTTTATTTT+TGG | - | chr1_1:59680977-59680996 | Msa0032510:intron | 30.0% |
| ! | CCAATTTAAGGCAAAGAAAA+AGG | + | chr1_1:59681441-59681460 | None:intergenic | 30.0% |
| ! | CCTTTTTCTTTGCCTTAAAT+TGG | - | chr1_1:59681438-59681457 | Msa0032510:CDS | 30.0% |
| CCTGAAACAAATCCAATTTA+AGG | + | chr1_1:59681453-59681472 | None:intergenic | 30.0% | |
| ! | CCTTAAATTGGATTTGTTTC+AGG | - | chr1_1:59681450-59681469 | Msa0032510:CDS | 30.0% |
| TGAAGTGATTGTTAAGACAA+AGG | - | chr1_1:59681546-59681565 | Msa0032510:intron | 30.0% | |
| GCATAATTTCTTTCATAGTG+TGG | + | chr1_1:59681909-59681928 | None:intergenic | 30.0% | |
| ACGGGATAATTTACAAAGAA+GGG | + | chr1_1:59681931-59681950 | None:intergenic | 30.0% | |
| TACGGGATAATTTACAAAGA+AGG | + | chr1_1:59681932-59681951 | None:intergenic | 30.0% | |
| TTTATTAACTATCAGGCTAC+GGG | + | chr1_1:59681949-59681968 | None:intergenic | 30.0% | |
| GTTTATTAACTATCAGGCTA+CGG | + | chr1_1:59681950-59681969 | None:intergenic | 30.0% | |
| ! | CAGCTTGTTTATTAACTATC+AGG | + | chr1_1:59681956-59681975 | None:intergenic | 30.0% |
| CATTCAAATGCTGAATTAAC+GGG | + | chr1_1:59682310-59682329 | None:intergenic | 30.0% | |
| GTTGTATGCATGATAAGAAA+CGG | - | chr1_1:59682581-59682600 | Msa0032510:intron | 30.0% | |
| GAGCAGATGTTGAAATTTAA+GGG | + | chr1_1:59682694-59682713 | None:intergenic | 30.0% | |
| AGAGCAGATGTTGAAATTTA+AGG | + | chr1_1:59682695-59682714 | None:intergenic | 30.0% | |
| ! | GACTTTTATCCCATTTTCAA+TGG | + | chr1_1:59682808-59682827 | None:intergenic | 30.0% |
| GATAGAAAGAACTGCAAATA+CGG | - | chr1_1:59682956-59682975 | Msa0032510:CDS | 30.0% | |
| ATAGGATTGAAGCTACTAAT+TGG | + | chr1_1:59683117-59683136 | None:intergenic | 30.0% | |
| ! | ACCTTTTTGTGTTGTCTTTA+TGG | - | chr1_1:59683182-59683201 | Msa0032510:CDS | 30.0% |
| ACCATAAAGACAACACAAAA+AGG | + | chr1_1:59683186-59683205 | None:intergenic | 30.0% | |
| ! | AGCTATTCTAACTTTTCAAC+AGG | + | chr1_1:59683212-59683231 | None:intergenic | 30.0% |
| ! | CTTGCTTTCATTCAAAGTTT+TGG | + | chr1_1:59683342-59683361 | None:intergenic | 30.0% |
| CAAAATGCTGTAGTATTTCT+TGG | - | chr1_1:59683371-59683390 | Msa0032510:five_prime_UTR | 30.0% | |
| GAAAAAAAATCAAGTAGCGC+GGG | - | chr1_1:59677568-59677587 | Msa0032510:three_prime_UTR | 35.0% | |
| TTTATCACTGTTGAACACTG+CGG | - | chr1_1:59677839-59677858 | Msa0032510:three_prime_UTR | 35.0% | |
| ! | GATGATTTTCTTGCGGTATT+GGG | - | chr1_1:59677863-59677882 | Msa0032510:three_prime_UTR | 35.0% |
| ! | ATGATTTTCTTGCGGTATTG+GGG | - | chr1_1:59677864-59677883 | Msa0032510:three_prime_UTR | 35.0% |
| !! | AACTTGTTCCGTTGTTTCTT+AGG | + | chr1_1:59678022-59678041 | None:intergenic | 35.0% |
| TATAGTACCACTGAGTTTGT+AGG | + | chr1_1:59678109-59678128 | None:intergenic | 35.0% | |
| TAATTGTGCTTCCTTAAGTG+AGG | - | chr1_1:59678326-59678345 | Msa0032510:CDS | 35.0% | |
| AGCTTTCTAGGTATAGCTTA+TGG | - | chr1_1:59678426-59678445 | Msa0032510:CDS | 35.0% | |
| GCTTATACCATAAACACTGA+TGG | + | chr1_1:59678535-59678554 | None:intergenic | 35.0% | |
| ATTAAGCTGTTTACCGAAAC+GGG | - | chr1_1:59678560-59678579 | Msa0032510:intron | 35.0% | |
| ! | GTTAGTTTAATCTCTGTGCA+TGG | + | chr1_1:59678653-59678672 | None:intergenic | 35.0% |
| TGCACAGAGATTAAACTAAC+TGG | - | chr1_1:59678653-59678672 | Msa0032510:intron | 35.0% | |
| TGGATGTAAGCATATTTGGA+TGG | - | chr1_1:59678716-59678735 | Msa0032510:intron | 35.0% | |
| GTGTTATAGAATGGTAGAAG+TGG | - | chr1_1:59678875-59678894 | Msa0032510:intron | 35.0% | |
| GCGCTAGATGATATTGAATT+GGG | - | chr1_1:59678995-59679014 | Msa0032510:intron | 35.0% | |
| !!! | AGTTTTATTCTTATGCCCAC+TGG | - | chr1_1:59679097-59679116 | Msa0032510:CDS | 35.0% |
| AGATACAACTACTGTAACTC+CGG | + | chr1_1:59679438-59679457 | None:intergenic | 35.0% | |
| TCCTGAATGAGTGAAAGTAA+GGG | + | chr1_1:59679461-59679480 | None:intergenic | 35.0% | |
| ATCCTGAATGAGTGAAAGTA+AGG | + | chr1_1:59679462-59679481 | None:intergenic | 35.0% | |
| !! | CCCAATAAATGATTGGTTTC+CGG | + | chr1_1:59679802-59679821 | None:intergenic | 35.0% |
| CCGGAAACCAATCATTTATT+GGG | - | chr1_1:59679799-59679818 | Msa0032510:intron | 35.0% | |
| ! | TCTAAAATGCATGCATCAGA+AGG | - | chr1_1:59679824-59679843 | Msa0032510:intron | 35.0% |
| AAAGATCTCACGTGCATATT+TGG | - | chr1_1:59679905-59679924 | Msa0032510:intron | 35.0% | |
| !!! | TGATTTTGAGTTCTGACATG+TGG | - | chr1_1:59680382-59680401 | Msa0032510:intron | 35.0% |
| ACATACCAACTACTTCAAAG+AGG | + | chr1_1:59680408-59680427 | None:intergenic | 35.0% | |
| CAAGACATAATACAGACTTC+TGG | + | chr1_1:59680442-59680461 | None:intergenic | 35.0% | |
| ATTATGTCTTGTCTCTGTAC+TGG | - | chr1_1:59680451-59680470 | Msa0032510:intron | 35.0% | |
| TGAGAGAAAGACCAATATGA+CGG | + | chr1_1:59680668-59680687 | None:intergenic | 35.0% | |
| TCACAGGAAAAGAAAACCAT+TGG | - | chr1_1:59680757-59680776 | Msa0032510:intron | 35.0% | |
| GATTTCAAGCTTCAAACCAA+TGG | + | chr1_1:59680776-59680795 | None:intergenic | 35.0% | |
| CTTTAACCCATGTTTGGATA+TGG | + | chr1_1:59680798-59680817 | None:intergenic | 35.0% | |
| ! | TTTGGTCTTTAACCCATGTT+TGG | + | chr1_1:59680804-59680823 | None:intergenic | 35.0% |
| ! | TGGTCCCTTAACCTAATTTT+AGG | + | chr1_1:59680862-59680881 | None:intergenic | 35.0% |
| ! | TGTCAGGCTCTAATTATGTT+GGG | + | chr1_1:59681005-59681024 | None:intergenic | 35.0% |
| TTAGCAATCTCCATCCTAAA+CGG | + | chr1_1:59681170-59681189 | None:intergenic | 35.0% | |
| TTCTAATTACCTCACGAACT+GGG | + | chr1_1:59681360-59681379 | None:intergenic | 35.0% | |
| ATTCTAATTACCTCACGAAC+TGG | + | chr1_1:59681361-59681380 | None:intergenic | 35.0% | |
| CTTTCAAGAACAATTGCATG+TGG | + | chr1_1:59681499-59681518 | None:intergenic | 35.0% | |
| !!! | CGACACATTCACTTTTTGAA+AGG | + | chr1_1:59681639-59681658 | None:intergenic | 35.0% |
| ! | GAGTTGCTGTTCAAAAGAAA+TGG | - | chr1_1:59681734-59681753 | Msa0032510:intron | 35.0% |
| ! | GTATGTGCAACTATTGCTTT+TGG | - | chr1_1:59681778-59681797 | Msa0032510:CDS | 35.0% |
| !! | TGCAACTATTGCTTTTGGAA+TGG | - | chr1_1:59681783-59681802 | Msa0032510:CDS | 35.0% |
| !!! | GCAACTATTGCTTTTGGAAT+GGG | - | chr1_1:59681784-59681803 | Msa0032510:CDS | 35.0% |
| !!! | CAACTATTGCTTTTGGAATG+GGG | - | chr1_1:59681785-59681804 | Msa0032510:CDS | 35.0% |
| AAACAAGCTGAATGGTCTAT+TGG | - | chr1_1:59681966-59681985 | Msa0032510:CDS | 35.0% | |
| TATGTCCACCATAAGTAGAA+AGG | + | chr1_1:59682127-59682146 | None:intergenic | 35.0% | |
| GCATTTAAACACATTGCATG+TGG | + | chr1_1:59682353-59682372 | None:intergenic | 35.0% | |
| CTCTACTAAAATCCTTCTTC+TGG | + | chr1_1:59682562-59682581 | None:intergenic | 35.0% | |
| AAACGGCCAAGGATATAAAA+AGG | - | chr1_1:59682598-59682617 | Msa0032510:intron | 35.0% | |
| !!! | GGAAAGTTTTAAGACAGCAA+TGG | - | chr1_1:59682619-59682638 | Msa0032510:intron | 35.0% |
| ! | ACAGTACTGTTGCATCTTTT+TGG | + | chr1_1:59682651-59682670 | None:intergenic | 35.0% |
| GCAACAGTACTGTGAATTAA+AGG | - | chr1_1:59682658-59682677 | Msa0032510:intron | 35.0% | |
| ! | TCAAGTACAAGTTGACCATT+TGG | - | chr1_1:59682826-59682845 | Msa0032510:CDS | 35.0% |
| ! | TGAATGTTTAGGATGAATGC+CGG | - | chr1_1:59682897-59682916 | Msa0032510:CDS | 35.0% |
| CAAACACTACTTGAACACTT+TGG | - | chr1_1:59682923-59682942 | Msa0032510:CDS | 35.0% | |
| TCTTGAGACAGTTATCACAA+GGG | + | chr1_1:59682988-59683007 | None:intergenic | 35.0% | |
| TACTAATTGGAGCTTCACAT+TGG | + | chr1_1:59683104-59683123 | None:intergenic | 35.0% | |
| AAAAGGTCCATTGAGATGTT+TGG | + | chr1_1:59683169-59683188 | None:intergenic | 35.0% | |
| GAAAAGTTAGAATAGCTCTC+TGG | - | chr1_1:59683215-59683234 | Msa0032510:CDS | 35.0% | |
| GAAGCAACAACAACACGATT+TGG | - | chr1_1:59677624-59677643 | Msa0032510:three_prime_UTR | 40.0% | |
| !! | ATCAGTTTAGCTCTCGATCT+CGG | - | chr1_1:59677667-59677686 | Msa0032510:three_prime_UTR | 40.0% |
| !! | ACGGTCAAAACATTGGTTTG+CGG | + | chr1_1:59677707-59677726 | None:intergenic | 40.0% |
| ! | CGATGATTTTCTTGCGGTAT+TGG | - | chr1_1:59677862-59677881 | Msa0032510:three_prime_UTR | 40.0% |
| !! | TGATTTTCTTGCGGTATTGG+GGG | - | chr1_1:59677865-59677884 | Msa0032510:three_prime_UTR | 40.0% |
| ATGGGAAGATGTACACGAAA+TGG | - | chr1_1:59677910-59677929 | Msa0032510:CDS | 40.0% | |
| ACGATTCGCCTAAGAAACAA+CGG | - | chr1_1:59678011-59678030 | Msa0032510:intron | 40.0% | |
| GAAACAACGGAACAAGTTTG+TGG | - | chr1_1:59678024-59678043 | Msa0032510:intron | 40.0% | |
| TCAACATCCTACAAACTCAG+TGG | - | chr1_1:59678099-59678118 | Msa0032510:intron | 40.0% | |
| AATCTACCAAGCACTAACAC+TGG | - | chr1_1:59678189-59678208 | Msa0032510:intron | 40.0% | |
| GTCACAAGTGCTTATGTCAA+TGG | + | chr1_1:59678401-59678420 | None:intergenic | 40.0% | |
| ! | TTGTGACTTGTGAGCTTTCT+AGG | - | chr1_1:59678414-59678433 | Msa0032510:CDS | 40.0% |
| ! | TTTTCATCCATAGCCCGTTT+CGG | + | chr1_1:59678576-59678595 | None:intergenic | 40.0% |
| !! | TTTGCATTGGCCAGATTTTC+TGG | - | chr1_1:59678799-59678818 | Msa0032510:intron | 40.0% |
| CACATCGATACCAGAAAATC+TGG | + | chr1_1:59678812-59678831 | None:intergenic | 40.0% | |
| AAATCCTCCTTTGCTGCAAA+AGG | - | chr1_1:59678938-59678957 | Msa0032510:intron | 40.0% | |
| ! | ATTTCTGCCTTTTGCAGCAA+AGG | + | chr1_1:59678948-59678967 | None:intergenic | 40.0% |
| GGCGCTAGATGATATTGAAT+TGG | - | chr1_1:59678994-59679013 | Msa0032510:intron | 40.0% | |
| TCAAGCATGTAAAGCAGCTT+TGG | - | chr1_1:59679063-59679082 | Msa0032510:intron | 40.0% | |
| TTTATTCTTATGCCCACTGG+TGG | - | chr1_1:59679100-59679119 | Msa0032510:CDS | 40.0% | |
| ! | TGGCAAATCTCTTTGCTATC+AGG | - | chr1_1:59679123-59679142 | Msa0032510:CDS | 40.0% |
| GATACAACTACTGTAACTCC+GGG | + | chr1_1:59679437-59679456 | None:intergenic | 40.0% | |
| TCCCTTACTTTCACTCATTC+AGG | - | chr1_1:59679457-59679476 | Msa0032510:intron | 40.0% | |
| TAGCAGGTATTCCAAACTTG+AGG | + | chr1_1:59679502-59679521 | None:intergenic | 40.0% | |
| ACATACAAAAGCTTGCACGA+AGG | + | chr1_1:59679762-59679781 | None:intergenic | 40.0% | |
| GCCGGAAACCAATCATTTAT+TGG | - | chr1_1:59679798-59679817 | Msa0032510:intron | 40.0% | |
| ATCTCACGTGCATATTTGGT+TGG | - | chr1_1:59679909-59679928 | Msa0032510:intron | 40.0% | |
| !!! | TGCAGGTTTTGTTGTTGATG+AGG | - | chr1_1:59679960-59679979 | Msa0032510:intron | 40.0% |
| ! | ACAACATATCAGAGGCACAT+GGG | + | chr1_1:59680120-59680139 | None:intergenic | 40.0% |
| GTCATGAGACAACATATCAG+AGG | + | chr1_1:59680128-59680147 | None:intergenic | 40.0% | |
| GGTTCGAATGTGAAACAGTA+AGG | - | chr1_1:59680349-59680368 | Msa0032510:intron | 40.0% | |
| GAGAGAAAGACCAATATGAC+GGG | + | chr1_1:59680667-59680686 | None:intergenic | 40.0% | |
| ! | CATATTTAAGACCAGCTCAC+AGG | - | chr1_1:59680741-59680760 | Msa0032510:intron | 40.0% |
| AAATTAGGTTAAGGGACCAC+AGG | - | chr1_1:59680863-59680882 | Msa0032510:intron | 40.0% | |
| TTATGGCTAAACTACTCCTG+TGG | + | chr1_1:59680882-59680901 | None:intergenic | 40.0% | |
| TGAGGTATGCCTTTACTACT+TGG | + | chr1_1:59680951-59680970 | None:intergenic | 40.0% | |
| ! | TAAAGGCATACCTCAACAGT+CGG | - | chr1_1:59680956-59680975 | Msa0032510:intron | 40.0% |
| ! | GTGTCAGGCTCTAATTATGT+TGG | + | chr1_1:59681006-59681025 | None:intergenic | 40.0% |
| ! | TGGTTGAGCAAGATTTTCGT+TGG | - | chr1_1:59681100-59681119 | Msa0032510:CDS | 40.0% |
| ! | TAAACGGGTTCAAATCCTAG+TGG | + | chr1_1:59681154-59681173 | None:intergenic | 40.0% |
| ACTAGGATTTGAACCCGTTT+AGG | - | chr1_1:59681153-59681172 | Msa0032510:intron | 40.0% | |
| TAGCAATCTCCATCCTAAAC+GGG | + | chr1_1:59681169-59681188 | None:intergenic | 40.0% | |
| !! | AAACCACGTTTTTCAGCCAA+TGG | - | chr1_1:59681239-59681258 | Msa0032510:intron | 40.0% |
| !! | AACCACGTTTTTCAGCCAAT+GGG | - | chr1_1:59681240-59681259 | Msa0032510:intron | 40.0% |
| ATGATTTCCGGCCTGATTAT+CGG | - | chr1_1:59681266-59681285 | Msa0032510:intron | 40.0% | |
| ! | TCTTTTGAACAGCAACTCTC+TGG | + | chr1_1:59681732-59681751 | None:intergenic | 40.0% |
| GTTCAAAAGAAATGGCACGA+TGG | - | chr1_1:59681742-59681761 | Msa0032510:intron | 40.0% | |
| ! | CATTTTGTAGGTCATCAGAC+TGG | + | chr1_1:59682017-59682036 | None:intergenic | 40.0% |
| GCTAGAAAAATGCTACACGA+GGG | + | chr1_1:59682053-59682072 | None:intergenic | 40.0% | |
| AGCTAGAAAAATGCTACACG+AGG | + | chr1_1:59682054-59682073 | None:intergenic | 40.0% | |
| TCTCCAAGCCTTTCTACTTA+TGG | - | chr1_1:59682116-59682135 | Msa0032510:intron | 40.0% | |
| GGAAGATCAACAAGATCTCT+GGG | + | chr1_1:59682203-59682222 | None:intergenic | 40.0% | |
| AGGAAGATCAACAAGATCTC+TGG | + | chr1_1:59682204-59682223 | None:intergenic | 40.0% | |
| TATAGAGCAATGCAAACTGC+TGG | + | chr1_1:59682539-59682558 | None:intergenic | 40.0% | |
| CATTGCTCTATACCAGAAGA+AGG | - | chr1_1:59682547-59682566 | Msa0032510:intron | 40.0% | |
| GTTCAAGTAGTGTTTGTCTC+CGG | + | chr1_1:59682919-59682938 | None:intergenic | 40.0% | |
| GTCTTGAGACAGTTATCACA+AGG | + | chr1_1:59682989-59683008 | None:intergenic | 40.0% | |
| CATTCAACACGTGTTTGCTT+TGG | - | chr1_1:59683053-59683072 | Msa0032510:CDS | 40.0% | |
| GTAGCTTCAATCCTATCATG+CGG | - | chr1_1:59683121-59683140 | Msa0032510:intron | 40.0% | |
| ! | TACTTTTGTATACTCTGCGG+TGG | + | chr1_1:59683287-59683306 | None:intergenic | 40.0% |
| AAAATCAAGTAGCGCGGGAA+TGG | - | chr1_1:59677573-59677592 | Msa0032510:three_prime_UTR | 45.0% | |
| AGACGAGACGGTCAAAACAT+TGG | + | chr1_1:59677714-59677733 | None:intergenic | 45.0% | |
| GAAATGGAATCGCAAGCTGT+TGG | - | chr1_1:59677926-59677945 | Msa0032510:CDS | 45.0% | |
| ACGGAACAAGTTTGTGGAGT+TGG | - | chr1_1:59678030-59678049 | Msa0032510:intron | 45.0% | |
| CGGAACAAGTTTGTGGAGTT+GGG | - | chr1_1:59678031-59678050 | Msa0032510:intron | 45.0% | |
| TACGTACCAGTGTTAGTGCT+TGG | + | chr1_1:59678198-59678217 | None:intergenic | 45.0% | |
| ! | CTTCTGATCGAAGGTGTATC+AGG | + | chr1_1:59678275-59678294 | None:intergenic | 45.0% |
| !! | AGCGTTGGTGCTAGAAAGAT+AGG | - | chr1_1:59678293-59678312 | Msa0032510:CDS | 45.0% |
| TTACATGCTTGATGCTGCAG+TGG | + | chr1_1:59679055-59679074 | None:intergenic | 45.0% | |
| ! | TACTGTAACTCCGGGTTGAA+GGG | + | chr1_1:59679429-59679448 | None:intergenic | 45.0% |
| GTTGTCCCTGAGAGTTAAGA+GGG | + | chr1_1:59679939-59679958 | None:intergenic | 45.0% | |
| AGTTGTCCCTGAGAGTTAAG+AGG | + | chr1_1:59679940-59679959 | None:intergenic | 45.0% | |
| TTGATGAGGCACACTGTGTT+AGG | - | chr1_1:59679974-59679993 | Msa0032510:intron | 45.0% | |
| TGGGAAGAGCTACTTCAAGA+AGG | + | chr1_1:59680101-59680120 | None:intergenic | 45.0% | |
| ! | GACAACATATCAGAGGCACA+TGG | + | chr1_1:59680121-59680140 | None:intergenic | 45.0% |
| AAGAACAGCATGTGAAAGGG+TGG | - | chr1_1:59680328-59680347 | Msa0032510:intron | 45.0% | |
| !! | TGTGGCCTCTTTGAAGTAGT+TGG | - | chr1_1:59680400-59680419 | Msa0032510:intron | 45.0% |
| ! | TCTTGTCTCTGTACTGGTAC+TGG | - | chr1_1:59680457-59680476 | Msa0032510:intron | 45.0% |
| ! | GGTTTTCTTTTCCTGTGAGC+TGG | + | chr1_1:59680755-59680774 | None:intergenic | 45.0% |
| ! | AAAGGCATACCTCAACAGTC+GGG | - | chr1_1:59680957-59680976 | Msa0032510:intron | 45.0% |
| ATTAGAGCCTGACACTCTAG+TGG | - | chr1_1:59681011-59681030 | Msa0032510:intron | 45.0% | |
| TTAGAGCCTGACACTCTAGT+GGG | - | chr1_1:59681012-59681031 | Msa0032510:intron | 45.0% | |
| TTGTCAGCCTCTCTTGATGT+GGG | - | chr1_1:59681123-59681142 | Msa0032510:CDS | 45.0% | |
| GGATTTGAACCCGTTTAGGA+TGG | - | chr1_1:59681157-59681176 | Msa0032510:intron | 45.0% | |
| !! | ACCACGTTTTTCAGCCAATG+GGG | - | chr1_1:59681241-59681260 | Msa0032510:intron | 45.0% |
| TGATTTCCGGCCTGATTATC+GGG | - | chr1_1:59681267-59681286 | Msa0032510:intron | 45.0% | |
| GATCCTAATCCCCGATAATC+AGG | + | chr1_1:59681280-59681299 | None:intergenic | 45.0% | |
| AAGGAACCACTAAAGCAGCT+TGG | - | chr1_1:59681565-59681584 | Msa0032510:intron | 45.0% | |
| GATCGTTTCAAGAGTCAGTG+TGG | - | chr1_1:59681601-59681620 | Msa0032510:intron | 45.0% | |
| TTTGAACAGCAACTCTCTGG+CGG | + | chr1_1:59681729-59681748 | None:intergenic | 45.0% | |
| AAAGAAATGGCACGATGGAG+AGG | - | chr1_1:59681747-59681766 | Msa0032510:intron | 45.0% | |
| TAGGTCATCAGACTGGTAGT+CGG | + | chr1_1:59682010-59682029 | None:intergenic | 45.0% | |
| GAAAAATGCTACACGAGGGT+TGG | + | chr1_1:59682049-59682068 | None:intergenic | 45.0% | |
| CCACCATAAGTAGAAAGGCT+TGG | + | chr1_1:59682122-59682141 | None:intergenic | 45.0% | |
| CCAAGCCTTTCTACTTATGG+TGG | - | chr1_1:59682119-59682138 | Msa0032510:intron | 45.0% | |
| TGCATGATAAGAAACGGCCA+AGG | - | chr1_1:59682587-59682606 | Msa0032510:intron | 45.0% | |
| CGTGGTTCCAAACATCTCAA+TGG | - | chr1_1:59683159-59683178 | Msa0032510:intron | 45.0% | |
| TGGAAGTGGGAAACAGTAGC+AGG | - | chr1_1:59677593-59677612 | Msa0032510:three_prime_UTR | 50.0% | |
| TACCGTAGAGAGAGACGAGA+CGG | + | chr1_1:59677726-59677745 | None:intergenic | 50.0% | |
| ! | CTGCGGCGATGATTTTCTTG+CGG | - | chr1_1:59677856-59677875 | Msa0032510:three_prime_UTR | 50.0% |
| ! | GTTGGGTTCTAGTGACGATG+AGG | - | chr1_1:59678048-59678067 | Msa0032510:intron | 50.0% |
| ! | ACACCTTCGATCAGAAGCGT+TGG | - | chr1_1:59678278-59678297 | Msa0032510:CDS | 50.0% |
| !! | CTGTTTACCGAAACGGGCTA+TGG | - | chr1_1:59678566-59678585 | Msa0032510:intron | 50.0% |
| TGGTAGAAGTGGCATCACTC+AGG | - | chr1_1:59678886-59678905 | Msa0032510:intron | 50.0% | |
| GGTAGAAGTGGCATCACTCA+GGG | - | chr1_1:59678887-59678906 | Msa0032510:intron | 50.0% | |
| ! | TCTGCCTTTTGCAGCAAAGG+AGG | + | chr1_1:59678945-59678964 | None:intergenic | 50.0% |
| ATTCTTATGCCCACTGGTGG+TGG | - | chr1_1:59679103-59679122 | Msa0032510:CDS | 50.0% | |
| AGAGATTTGCCACCACCAGT+GGG | + | chr1_1:59679115-59679134 | None:intergenic | 50.0% | |
| AAGAGATTTGCCACCACCAG+TGG | + | chr1_1:59679116-59679135 | None:intergenic | 50.0% | |
| ! | CTACTGTAACTCCGGGTTGA+AGG | + | chr1_1:59679430-59679449 | None:intergenic | 50.0% |
| TAGCTCTTGGAGAACAGCTG+CGG | + | chr1_1:59679558-59679577 | None:intergenic | 50.0% | |
| CAGCTGTTCTCCAAGAGCTA+AGG | - | chr1_1:59679558-59679577 | Msa0032510:CDS | 50.0% | |
| ! | GTGAATCTCGCCTTAGCTCT+TGG | + | chr1_1:59679571-59679590 | None:intergenic | 50.0% |
| GTGACACCTGAGAGAATTGC+CGG | - | chr1_1:59679780-59679799 | Msa0032510:intron | 50.0% | |
| TGGTTTCCGGCAATTCTCTC+AGG | + | chr1_1:59679789-59679808 | None:intergenic | 50.0% | |
| GTGCTCCCTCTTAACTCTCA+GGG | - | chr1_1:59679931-59679950 | Msa0032510:intron | 50.0% | |
| AACTCTCAGGGACAACTTGC+AGG | - | chr1_1:59679943-59679962 | Msa0032510:intron | 50.0% | |
| CATACCTCAACAGTCGGGAA+TGG | - | chr1_1:59680962-59680981 | Msa0032510:intron | 50.0% | |
| ATCTCCATTCCCGACTGTTG+AGG | + | chr1_1:59680969-59680988 | None:intergenic | 50.0% | |
| ! | ACACTCTAGTGGGTCCACAA+TGG | - | chr1_1:59681022-59681041 | Msa0032510:intron | 50.0% |
| AAGCTGTTGGGACACCATTG+TGG | + | chr1_1:59681039-59681058 | None:intergenic | 50.0% | |
| CAATGGTGTCCCAACAGCTT+CGG | - | chr1_1:59681039-59681058 | Msa0032510:intron | 50.0% | |
| GTTGTCAGCCTCTCTTGATG+TGG | - | chr1_1:59681122-59681141 | Msa0032510:CDS | 50.0% | |
| TTGATGTGGGTGACTCCACT+AGG | - | chr1_1:59681136-59681155 | Msa0032510:CDS | 50.0% | |
| ! | TCCCCATTGGCTGAAAAACG+TGG | + | chr1_1:59681245-59681264 | None:intergenic | 50.0% |
| GCCAATGGGGACATGATTTC+CGG | - | chr1_1:59681254-59681273 | Msa0032510:intron | 50.0% | |
| GATTTCCGGCCTGATTATCG+GGG | - | chr1_1:59681268-59681287 | Msa0032510:intron | 50.0% | |
| CTAATCCCCGATAATCAGGC+CGG | + | chr1_1:59681276-59681295 | None:intergenic | 50.0% | |
| CTTTCCACGTGTTCCTGTCA+TGG | - | chr1_1:59681312-59681331 | Msa0032510:CDS | 50.0% | |
| AATGCCATGACAGGAACACG+TGG | + | chr1_1:59681319-59681338 | None:intergenic | 50.0% | |
| ! | AGCTGTCCAAGCTGCTTTAG+TGG | + | chr1_1:59681574-59681593 | None:intergenic | 50.0% |
| GCAGCTTGGACAGCTACTAA+TGG | - | chr1_1:59681579-59681598 | Msa0032510:intron | 50.0% | |
| AAGGCAGCGTATTACCATGC+TGG | - | chr1_1:59681694-59681713 | Msa0032510:intron | 50.0% | |
| ! | AGCGTATTACCATGCTGGCT+TGG | - | chr1_1:59681699-59681718 | Msa0032510:intron | 50.0% |
| TTGAACAGCAACTCTCTGGC+GGG | + | chr1_1:59681728-59681747 | None:intergenic | 50.0% | |
| GAATGCTGTCACCGCATGAT+AGG | + | chr1_1:59683135-59683154 | None:intergenic | 50.0% | |
| ! | GAGATGTTTGGAACCACGTC+AGG | + | chr1_1:59683157-59683176 | None:intergenic | 50.0% |
| AAGTAGCGCGGGAATGGAAG+TGG | - | chr1_1:59677579-59677598 | Msa0032510:three_prime_UTR | 55.0% | |
| AGTAGCGCGGGAATGGAAGT+GGG | - | chr1_1:59677580-59677599 | Msa0032510:three_prime_UTR | 55.0% | |
| GACCGTCTCGTCTCTCTCTA+CGG | - | chr1_1:59677721-59677740 | Msa0032510:three_prime_UTR | 55.0% | |
| ! | TCTTGCGGTATTGGGGGAGT+CGG | - | chr1_1:59677871-59677890 | Msa0032510:three_prime_UTR | 55.0% |
| AATCACGTGCTTGACACGCG+CGG | - | chr1_1:59677956-59677975 | Msa0032510:CDS | 55.0% | |
| ! | GGGTTCTAGTGACGATGAGG+AGG | - | chr1_1:59678051-59678070 | Msa0032510:intron | 55.0% |
| GCACCAACGCTTCTGATCGA+AGG | + | chr1_1:59678284-59678303 | None:intergenic | 55.0% | |
| AAGTGGCATCACTCAGGGCT+CGG | - | chr1_1:59678892-59678911 | Msa0032510:intron | 55.0% | |
| CTTCCAGCAACCCTTCAACC+CGG | - | chr1_1:59679416-59679435 | Msa0032510:CDS | 55.0% | |
| TTGGAGAACAGCTGCGGCTT+GGG | + | chr1_1:59679552-59679571 | None:intergenic | 55.0% | |
| GGTGCTCCCTCTTAACTCTC+AGG | - | chr1_1:59679930-59679949 | Msa0032510:intron | 55.0% | |
| ! | TGTGGACCCACTAGAGTGTC+AGG | + | chr1_1:59681021-59681040 | None:intergenic | 55.0% |
| TGTGGGACTGATCCCTGGTT+CGG | - | chr1_1:59681076-59681095 | Msa0032510:CDS | 55.0% | |
| TTGCTCAACCAGCCGAACCA+GGG | + | chr1_1:59681091-59681110 | None:intergenic | 55.0% | |
| GGAGTCACCCACATCAAGAG+AGG | + | chr1_1:59681133-59681152 | None:intergenic | 55.0% | |
| GCCGGAAATCATGTCCCCAT+TGG | + | chr1_1:59681258-59681277 | None:intergenic | 55.0% | |
| CGGCCTGATTATCGGGGATT+AGG | - | chr1_1:59681274-59681293 | Msa0032510:intron | 55.0% | |
| AACTGGGTGAGTTGCAGTGG+CGG | + | chr1_1:59681344-59681363 | None:intergenic | 55.0% | |
| ACGAACTGGGTGAGTTGCAG+TGG | + | chr1_1:59681347-59681366 | None:intergenic | 55.0% | |
| TGCAACTCACCCAGTTCGTG+AGG | - | chr1_1:59681348-59681367 | Msa0032510:CDS | 55.0% | |
| GGCGCAAGACACGGAGGAAT+GGG | - | chr1_1:59677892-59677911 | Msa0032510:CDS | 60.0% | |
| ! | ACTCCGGGTTGAAGGGTTGC+TGG | + | chr1_1:59679422-59679441 | None:intergenic | 60.0% |
| CTTGGAGAACAGCTGCGGCT+TGG | + | chr1_1:59679553-59679572 | None:intergenic | 60.0% | |
| TCCAGAGGGCCGAAGCTGTT+GGG | + | chr1_1:59681051-59681070 | None:intergenic | 60.0% | |
| AGTCCCACAGTGGCTCCAGA+GGG | + | chr1_1:59681065-59681084 | None:intergenic | 60.0% | |
| ACCAGGGATCAGTCCCACAG+TGG | + | chr1_1:59681075-59681094 | None:intergenic | 60.0% | |
| CTTGCTCAACCAGCCGAACC+AGG | + | chr1_1:59681092-59681111 | None:intergenic | 60.0% | |
| GTGGCGGTCAATGCCATGAC+AGG | + | chr1_1:59681328-59681347 | None:intergenic | 60.0% | |
| CGGTGACAGCATTCCTGACG+TGG | - | chr1_1:59683141-59683160 | Msa0032510:intron | 60.0% | |
| CGGCGCAAGACACGGAGGAA+TGG | - | chr1_1:59677891-59677910 | Msa0032510:exon | 65.0% | |
| GTGCTTGACACGCGCGGTGA+TGG | - | chr1_1:59677962-59677981 | Msa0032510:CDS | 65.0% | |
| TCCCAACAGCTTCGGCCCTC+TGG | - | chr1_1:59681047-59681066 | Msa0032510:intron | 65.0% | |
| CTCCAGAGGGCCGAAGCTGT+TGG | + | chr1_1:59681052-59681071 | None:intergenic | 65.0% | |
| CAGTCCCACAGTGGCTCCAG+AGG | + | chr1_1:59681066-59681085 | None:intergenic | 65.0% | |
| GCCACTGTGGGACTGATCCC+TGG | - | chr1_1:59681071-59681090 | Msa0032510:CDS | 65.0% | |
| !! | GGACTGATCCCTGGTTCGGC+TGG | - | chr1_1:59681080-59681099 | Msa0032510:CDS | 65.0% |
| GGGGGAGTCGGCGCAAGACA+CGG | - | chr1_1:59677883-59677902 | Msa0032510:exon | 70.0% | |
| GGAGTCGGCGCAAGACACGG+AGG | - | chr1_1:59677886-59677905 | Msa0032510:exon | 70.0% | |
| !! | TCGGCCCTCTGGAGCCACTG+TGG | - | chr1_1:59681058-59681077 | Msa0032510:intron | 70.0% |
| !! | CGGCCCTCTGGAGCCACTGT+GGG | - | chr1_1:59681059-59681078 | Msa0032510:intron | 70.0% |
| GGCGGGCAGCCAAGCCAGCA+TGG | + | chr1_1:59681711-59681730 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 59677512 | 59683398 | 59677512 | ID=Msa0032510;Name=Msa0032510 |
| chr1_1 | mRNA | 59677512 | 59683398 | 59677512 | ID=Msa0032510-mRNA-1;Parent=Msa0032510;Name=Msa0032510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=80|0.88|0.8|1|1|1|10|380|615 |
| chr1_1 | exon | 59677512 | 59678002 | 59677512 | ID=Msa0032510-mRNA-1:exon:18462;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59678231 | 59678455 | 59678231 | ID=Msa0032510-mRNA-1:exon:18461;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59679085 | 59679438 | 59679085 | ID=Msa0032510-mRNA-1:exon:18460;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59679541 | 59679655 | 59679541 | ID=Msa0032510-mRNA-1:exon:18459;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59680915 | 59680958 | 59680915 | ID=Msa0032510-mRNA-1:exon:18458;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59681065 | 59681161 | 59681065 | ID=Msa0032510-mRNA-1:exon:18457;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59681304 | 59681494 | 59681304 | ID=Msa0032510-mRNA-1:exon:18456;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59681766 | 59682026 | 59681766 | ID=Msa0032510-mRNA-1:exon:18455;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59682790 | 59683088 | 59682790 | ID=Msa0032510-mRNA-1:exon:18454;Parent=Msa0032510-mRNA-1 |
| chr1_1 | exon | 59683168 | 59683398 | 59683168 | ID=Msa0032510-mRNA-1:exon:18453;Parent=Msa0032510-mRNA-1 |
| chr1_1 | five_prime_UTR | 59683319 | 59683398 | 59683319 | ID=Msa0032510-mRNA-1:five_prime_utr;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59683168 | 59683318 | 59683168 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59682790 | 59683088 | 59682790 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59681766 | 59682026 | 59681766 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59681304 | 59681494 | 59681304 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59681065 | 59681161 | 59681065 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59680915 | 59680958 | 59680915 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59679541 | 59679655 | 59679541 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59679085 | 59679438 | 59679085 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59678231 | 59678455 | 59678231 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | CDS | 59677892 | 59678002 | 59677892 | ID=Msa0032510-mRNA-1:cds;Parent=Msa0032510-mRNA-1 |
| chr1_1 | three_prime_UTR | 59677512 | 59677891 | 59677512 | ID=Msa0032510-mRNA-1:three_prime_utr;Parent=Msa0032510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
