AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0033290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0033290 MtrunA17_Chr1g0166821 99.782 458 1 0 1 458 1 458 0.0 938
Msa0033290 MtrunA17_Chr1g0187571 86.022 465 57 3 1 458 1 464 0.0 770
Msa0033290 MtrunA17_Chr7g0261501 77.440 461 94 6 2 452 1 461 0.0 701
Msa0033290 MtrunA17_Chr1g0183631 72.391 460 110 7 2 452 1 452 0.0 668
Msa0033290 MtrunA17_Chr1g0167261 74.731 372 66 4 1 368 1 348 0.0 553
Msa0033290 MtrunA17_Chr2g0329981 64.186 430 129 5 2 424 1 412 0.0 551
Msa0033290 MtrunA17_Chr4g0071031 62.980 443 144 6 2 425 1 442 0.0 548
Msa0033290 MtrunA17_Chr8g0342821 60.851 470 162 8 2 452 1 467 0.0 544
Msa0033290 MtrunA17_Chr8g0390211 61.305 429 147 7 2 420 1 420 0.0 524
Msa0033290 MtrunA17_Chr6g0486611 62.704 429 134 10 2 416 1 417 0.0 522
Msa0033290 MtrunA17_Chr2g0299661 57.415 472 172 9 2 452 1 464 1.25e-180 513
Msa0033290 MtrunA17_Chr1g0146151 54.567 427 178 4 2 420 1 419 1.46e-166 475
Msa0033290 MtrunA17_Chr3g0140071 54.628 443 162 6 2 418 1 430 2.73e-165 473
Msa0033290 MtrunA17_Chr7g0214531 39.649 285 153 6 6 274 31 312 2.22e-60 207
Msa0033290 MtrunA17_Chr3g0140431 38.710 279 158 6 6 274 32 307 2.81e-57 199
Msa0033290 MtrunA17_Chr1g0213321 38.028 284 162 6 6 278 113 393 5.79e-57 199
Msa0033290 MtrunA17_Chr1g0146301 37.276 279 162 6 6 274 118 393 8.52e-56 196
Msa0033290 MtrunA17_Chr7g0253211 37.234 282 161 5 10 278 324 602 1.48e-53 192
Msa0033290 MtrunA17_Chr8g0340491 37.234 282 155 6 10 274 128 404 4.08e-51 184
Msa0033290 MtrunA17_Chr3g0107051 31.050 219 129 8 6 215 17 222 1.83e-13 72.0
Msa0033290 MtrunA17_Chr4g0075541 27.305 282 175 10 12 282 89 351 2.37e-13 71.2
Msa0033290 MtrunA17_Chr5g0405421 25.000 224 151 6 9 224 98 312 1.80e-12 69.3
Msa0033290 MtrunA17_Chr7g0267751 27.189 217 134 8 10 216 135 337 1.10e-11 67.0
Msa0033290 MtrunA17_Chr7g0245031 33.871 124 69 4 108 229 250 362 2.27e-11 65.9
Msa0033290 MtrunA17_Chr7g0272841 24.537 216 144 4 9 214 67 273 4.42e-11 65.1
Msa0033290 MtrunA17_Chr4g0072831 30.719 153 74 6 8 154 8 134 5.43e-11 63.5
Msa0033290 MtrunA17_Chr4g0001331 30.667 225 126 12 5 216 15 222 5.83e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0033290 AT3G23340.1 77.511 458 86 4 2 458 1 442 0.0 723
Msa0033290 AT4G14340.1 75.647 464 92 5 2 458 7 456 0.0 717
Msa0033290 AT3G23340.2 74.891 458 84 5 2 458 1 428 0.0 687
Msa0033290 AT5G43320.1 72.708 480 108 8 2 458 1 480 0.0 683
Msa0033290 AT1G04440.1 71.795 468 121 3 2 458 1 468 0.0 676
Msa0033290 AT4G28540.1 71.639 476 107 9 2 452 5 477 0.0 664
Msa0033290 AT1G03930.1 73.517 472 101 9 2 452 1 469 0.0 651
Msa0033290 AT5G44100.1 71.158 475 112 6 2 452 1 474 0.0 630
Msa0033290 AT5G44100.2 71.158 475 112 6 2 452 1 474 0.0 630
Msa0033290 AT4G14340.2 86.503 326 43 1 2 326 7 332 0.0 602
Msa0033290 AT5G43320.2 84.545 330 46 2 2 326 1 330 0.0 575
Msa0033290 AT5G43320.3 84.545 330 46 2 2 326 1 330 0.0 575
Msa0033290 AT1G72710.1 69.895 382 105 5 2 377 1 378 0.0 544
Msa0033290 AT4G26100.1 60.089 451 148 6 2 422 1 449 0.0 541
Msa0033290 AT5G57015.1 77.143 315 69 1 2 316 1 312 0.0 531
Msa0033290 AT2G19470.1 73.494 332 81 3 2 327 1 331 0.0 525
Msa0033290 AT4G28880.3 72.930 314 85 0 2 315 1 314 1.26e-176 501
Msa0033290 AT4G28880.2 72.930 314 85 0 2 315 1 314 1.26e-176 501
Msa0033290 AT4G28880.1 72.930 314 85 0 2 315 1 314 1.26e-176 501
Msa0033290 AT4G28880.4 72.930 314 85 0 2 315 1 314 1.26e-176 501
Msa0033290 AT4G28860.1 61.765 408 124 8 2 391 1 394 1.13e-175 498
Msa0033290 AT4G28860.2 71.875 320 85 2 2 321 1 315 3.16e-175 496
Msa0033290 AT4G08800.1 66.107 298 69 2 2 299 1 266 5.98e-146 418
Msa0033290 AT2G25760.2 40.357 280 152 4 10 274 107 386 5.58e-62 213
Msa0033290 AT2G25760.1 39.643 280 151 5 10 274 107 383 7.09e-59 205
Msa0033290 AT3G13670.1 35.640 289 167 6 6 278 131 416 3.99e-54 192
Msa0033290 AT3G03940.1 36.170 282 164 5 10 278 140 418 1.35e-53 191
Msa0033290 AT5G18190.2 36.170 282 164 5 10 278 130 408 2.16e-53 190
Msa0033290 AT5G18190.1 36.170 282 164 5 10 278 130 408 2.16e-53 190
Msa0033290 AT3G50530.1 25.751 233 138 7 6 220 144 359 1.15e-12 70.5
Msa0033290 AT3G06030.1 26.389 216 140 7 9 214 67 273 8.02e-12 67.8
Msa0033290 AT1G62400.1 26.761 284 174 11 12 282 88 350 8.75e-12 67.0
Msa0033290 AT1G30270.1 27.854 219 133 8 8 215 29 233 3.33e-11 65.5
Msa0033290 AT1G30270.2 27.854 219 133 8 8 215 29 233 4.16e-11 65.5

Find 172 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAGTAAAATTCTGAATTT+TGG 0.082557 1_1:-60761341 Msa0033290:five_prime_UTR
TCCAGATGGTCCTGGGTTTA+AGG 0.165568 1_1:+60757074 None:intergenic
TTCAAACTTGGAAGGAAAAT+TGG 0.184960 1_1:-60761267 Msa0033290:CDS
AGCAGCAGACCAAGCTCTTC+TGG 0.195678 1_1:-60756483 Msa0033290:CDS
CATGAAGAGTCTTTATCTTT+AGG 0.208657 1_1:-60756067 Msa0033290:three_prime_UTR
CTGGAGTAGAACCAAGTAAA+AGG 0.212756 1_1:-60761478 Msa0033290:five_prime_UTR
GTCATTTGGAGAAATTTATT+TGG 0.224733 1_1:-60761238 Msa0033290:CDS
CTACAAAATCTCTACAATTT+CGG 0.245113 1_1:-60761618 Msa0033290:five_prime_UTR
TTGAAGAAGCATATACAATT+TGG 0.250533 1_1:+60759681 None:intergenic
GAGAAATATCAATTAGCTTT+TGG 0.252061 1_1:+60756162 None:intergenic
TATCACCCTTCCATTGCATT+TGG 0.277778 1_1:-60755934 Msa0033290:three_prime_UTR
TTTGTAGGAAAGAAGGAAAA+TGG 0.298975 1_1:+60761634 None:intergenic
GTCATGGCCATTGACCTTCT+TGG 0.314864 1_1:-60759290 Msa0033290:CDS
AATCGAAGTAAGAACAAATC+TGG 0.316441 1_1:+60761439 None:intergenic
ATCACCCTTCCATTGCATTT+GGG 0.329797 1_1:-60755933 Msa0033290:three_prime_UTR
GTTATGATGGATCTTGTTAT+TGG 0.331896 1_1:-60761297 Msa0033290:CDS
CAGAGAGAAGGGTAAGGATT+TGG 0.335145 1_1:+60761560 None:intergenic
TCATTTGGAGAAATTTATTT+GGG 0.336755 1_1:-60761237 Msa0033290:intron
AAGCATTGAAGTACCTCTAT+TGG 0.339689 1_1:+60757758 None:intergenic
GAAATTCGAGATAGATTATC+TGG 0.347764 1_1:-60756788 Msa0033290:CDS
TGTAGCAACCTGATTCTGAT+AGG 0.353677 1_1:-60756557 Msa0033290:intron
TCTCTTAAGATATGAATAAT+CGG 0.357282 1_1:+60757393 None:intergenic
ATATTGAAGTATCCACAAAT+TGG 0.362130 1_1:-60757218 Msa0033290:CDS
AAAATTGGAAGTGGGTCATT+TGG 0.364493 1_1:-60761252 Msa0033290:CDS
AGTTTGACTATGTATTTGAT+TGG 0.365329 1_1:-60757244 Msa0033290:CDS
ATATCTTAAGAGACTCTTCC+GGG 0.366043 1_1:-60757383 Msa0033290:CDS
AGAAACACTAACCACATCTT+TGG 0.368375 1_1:+60756688 None:intergenic
GCCTTAAACCCAGGACCATC+TGG 0.374719 1_1:-60757075 Msa0033290:CDS
GAGCGATTAGAACGGCCTTC+AGG 0.389926 1_1:-60757051 Msa0033290:intron
CATATCTTAAGAGACTCTTC+CGG 0.390501 1_1:-60757384 Msa0033290:CDS
GGTCTGCTGCTTGATATCAT+TGG 0.391696 1_1:+60756495 None:intergenic
CTTCCATGATTATCTAAGCT+TGG 0.392129 1_1:-60756097 Msa0033290:three_prime_UTR
CCTGTGTTGTGGTCCATTCA+TGG 0.394126 1_1:-60756185 Msa0033290:three_prime_UTR
GACAACTTTCTGATGGGTTT+AGG 0.396422 1_1:-60759035 Msa0033290:CDS
ACCGCAATGATCGGCAATAG+TGG 0.400015 1_1:+60757428 None:intergenic
GGGTGGCTCCTAATTTAGAT+TGG 0.401275 1_1:-60755896 Msa0033290:three_prime_UTR
TTTAAGGCTGGTTTCACACT+TGG 0.402104 1_1:+60757090 None:intergenic
GGTGGCTCCTAATTTAGATT+GGG 0.404634 1_1:-60755895 Msa0033290:three_prime_UTR
TTTAGGCCGCAAGGCAAATC+AGG 0.406238 1_1:-60759018 Msa0033290:intron
TAGGAGCCACCCACTATTAG+AGG 0.407235 1_1:+60755907 None:intergenic
AATCGCTCTCCAGATGGTCC+TGG 0.408461 1_1:+60757066 None:intergenic
TAGAAGACAAATGGAACATA+TGG 0.417936 1_1:+60755675 None:intergenic
TCAATTGAGTAGAAGACAAA+TGG 0.419686 1_1:+60755666 None:intergenic
GGTACGGGTAAAGGATGATT+TGG 0.422925 1_1:+60756374 None:intergenic
AGCTTTGAGCTCCTGTCAAT+TGG 0.426702 1_1:-60756315 Msa0033290:CDS
ATTTGGGACCCCTCTAATAG+TGG 0.431719 1_1:-60755917 Msa0033290:three_prime_UTR
GCAGCAGACCAAGCTCTTCT+GGG 0.432095 1_1:-60756482 Msa0033290:CDS
AGAATGTTTGGAGCCTCCTT+AGG 0.434861 1_1:-60755839 Msa0033290:three_prime_UTR
GATGGTCCTGGGTTTAAGGC+TGG 0.435674 1_1:+60757078 None:intergenic
TATCAGTGAACAAGAATGTT+TGG 0.436233 1_1:-60755851 Msa0033290:three_prime_UTR
GATAACCTTCTCGAATGAAT+AGG 0.436809 1_1:+60757359 None:intergenic
GAGCTCCTGTCAATTGGTAC+AGG 0.445961 1_1:-60756309 Msa0033290:CDS
TGTCCCTGCGGTACGGGTAA+AGG 0.446946 1_1:+60756365 None:intergenic
ACTCACCCTTGTTCTAGAAC+TGG 0.449488 1_1:+60757193 None:intergenic
ACCTCGTGTCCCTGCGGTAC+GGG 0.451847 1_1:+60756359 None:intergenic
CTGCGAGCCCTATCAGAATC+AGG 0.454495 1_1:+60756549 None:intergenic
TTAAATAAGTCTTCGAGACT+TGG 0.457011 1_1:+60759266 None:intergenic
CTAGAACTGGATCCAATTTG+TGG 0.461995 1_1:+60757206 None:intergenic
TGAGGATGCTTTGTCTTCAC+AGG 0.464666 1_1:+60759718 None:intergenic
TGGAGTAGAACCAAGTAAAA+GGG 0.468247 1_1:-60761477 Msa0033290:five_prime_UTR
TTTCATATTAGCTACCTGTA+TGG 0.470915 1_1:+60758600 None:intergenic
TTCTGTATTAATGTTTAACT+AGG 0.471777 1_1:-60755727 Msa0033290:three_prime_UTR
ATACCTCATATAAAGTGGTC+TGG 0.472466 1_1:-60759332 Msa0033290:CDS
GAACCAAGCTTAGATAATCA+TGG 0.474739 1_1:+60756094 None:intergenic
ATATATTGAGTAAAATGAAC+AGG 0.475550 1_1:+60756214 None:intergenic
CTCTTAAGATATGAATAATC+GGG 0.477779 1_1:+60757394 None:intergenic
AAATTGTATATGCTTCTTCA+AGG 0.478491 1_1:-60759679 Msa0033290:CDS
AGCATCTGAAGAAGCATTTG+AGG 0.479553 1_1:+60756120 None:intergenic
CTGCGCAAGGACTGCAGCAT+AGG 0.482559 1_1:-60756733 Msa0033290:CDS
GAAAATGCTTACTCCAATAG+AGG 0.494552 1_1:-60757771 Msa0033290:intron
ACTTGCATATCGAGCAGTTC+CGG 0.496384 1_1:+60758149 None:intergenic
CACCTCGTGTCCCTGCGGTA+CGG 0.496390 1_1:+60756358 None:intergenic
TACTTCGATTCAACTAGTGA+TGG 0.500913 1_1:-60761426 Msa0033290:five_prime_UTR
CGACTAGACCGGCTTTCACT+AGG 0.501636 1_1:+60756456 None:intergenic
CCATGGCAAGGCATGAAAGC+TGG 0.502381 1_1:-60757830 Msa0033290:CDS
CTAGGTTCCCCAGAAGAGCT+TGG 0.503285 1_1:+60756474 None:intergenic
GCGATATTGACGCAGAGAGA+AGG 0.503708 1_1:+60761548 None:intergenic
AGTAGAGTATATGCACTCTC+GGG 0.504876 1_1:-60759084 Msa0033290:CDS
CTTGCAAAGCATATTAGACT+TGG 0.506872 1_1:+60755960 None:intergenic
AGAAGGAAAATGGATGAGAA+TGG 0.508280 1_1:+60761644 None:intergenic
AGATAAAGACTCTTCATGAA+TGG 0.508742 1_1:+60756072 None:intergenic
TAAACCCATCAGAAAGTTGT+CGG 0.509282 1_1:+60759037 None:intergenic
ATCGCTCTCCAGATGGTCCT+GGG 0.510903 1_1:+60757067 None:intergenic
ACTCCAGACCACTTTATATG+AGG 0.512923 1_1:+60759329 None:intergenic
AGAGGAAGTTGCTGTTAAGC+TGG 0.513925 1_1:-60761101 Msa0033290:intron
AAATATGATGTGAATTCTGT+TGG 0.516022 1_1:+60757451 None:intergenic
TATATTTCTATCCTGTGTTG+TGG 0.518820 1_1:-60756196 Msa0033290:three_prime_UTR
GAGTAGAGTATATGCACTCT+CGG 0.522104 1_1:-60759085 Msa0033290:CDS
TCATCCTTTACCCGTACCGC+AGG 0.523644 1_1:-60756369 Msa0033290:CDS
CCAGCTTTCATGCCTTGCCA+TGG 0.523784 1_1:+60757830 None:intergenic
GTGGAAAATTCAAACTTGGA+AGG 0.527948 1_1:-60761275 Msa0033290:CDS
CACATAAGCATATACCATAC+AGG 0.528806 1_1:-60758614 Msa0033290:intron
GTAGCAACCTGATTCTGATA+GGG 0.529158 1_1:-60756556 Msa0033290:intron
GATAGATTATCTGGTGCAGT+GGG 0.530898 1_1:-60756779 Msa0033290:CDS
CGATATTGACGCAGAGAGAA+GGG 0.535898 1_1:+60761549 None:intergenic
TGGAGTGTGTGTTTAACAAA+CGG 0.538160 1_1:+60755695 None:intergenic
CTGGAATACCTCATATAAAG+TGG 0.539142 1_1:-60759337 Msa0033290:CDS
CAGGTATACATTATTGACTA+CGG 0.539979 1_1:-60758666 Msa0033290:CDS
AAAGCCCGACAACTTTCTGA+TGG 0.540005 1_1:-60759042 Msa0033290:CDS
ATTGGTGGAAAATTCAAACT+TGG 0.542741 1_1:-60761279 Msa0033290:CDS
TATCTTCAAACCGCAATGAT+CGG 0.546276 1_1:+60757419 None:intergenic
CTTGGAAGGAAAATTGGAAG+TGG 0.546345 1_1:-60761261 Msa0033290:CDS
ATGATGGATCTTGTTATTGG+TGG 0.549805 1_1:-60761294 Msa0033290:CDS
TATAAAGTGGTCTGGAGTCG+AGG 0.552004 1_1:-60759324 Msa0033290:CDS
ACTTCGATTCAACTAGTGAT+GGG 0.554162 1_1:-60761425 Msa0033290:five_prime_UTR
ACTTGGTCCAAGAAGGTCAA+TGG 0.555497 1_1:+60759283 None:intergenic
GCATCTGAAGAAGCATTTGA+GGG 0.557442 1_1:+60756121 None:intergenic
CGGGACCTATTCATTCGAGA+AGG 0.558168 1_1:-60757364 Msa0033290:intron
AAACCCATCAGAAAGTTGTC+GGG 0.559935 1_1:+60759038 None:intergenic
TTGGACTCGTAGAGAAGTTG+AGG 0.560210 1_1:+60759700 None:intergenic
CTTCGAGACTTGGTCCAAGA+AGG 0.563259 1_1:+60759276 None:intergenic
AAGCCCGACAACTTTCTGAT+GGG 0.563914 1_1:-60759041 Msa0033290:CDS
GCAATGGCAGTGCTTCGAAA+AGG 0.564353 1_1:-60756518 Msa0033290:CDS
TAGATTATCTGGTGCAGTGG+GGG 0.565713 1_1:-60756777 Msa0033290:CDS
TTTGGGACCCCTCTAATAGT+GGG 0.567908 1_1:-60755916 Msa0033290:three_prime_UTR
CGTTCTAATCGCTCTCCAGA+TGG 0.568142 1_1:+60757060 None:intergenic
ATCGAAGTAAGAACAAATCT+GGG 0.569725 1_1:+60761440 None:intergenic
GTTAACACTCACCTTGGAGT+TGG 0.571211 1_1:-60758126 Msa0033290:intron
GGGGTCCCAAATGCAATGGA+AGG 0.572247 1_1:+60755928 None:intergenic
AGAAGGAATGGCTCTGCGCA+AGG 0.573456 1_1:-60756746 Msa0033290:CDS
GGATCTGTGCGTGGAGGTGA+AGG 0.579945 1_1:+60761581 None:intergenic
CTGGGGAACCTAGTGAAAGC+CGG 0.580386 1_1:-60756464 Msa0033290:CDS
GTGAAACCAGCCTTAAACCC+AGG 0.580552 1_1:-60757084 Msa0033290:CDS
TAGATACCTGATTTGCCTTG+CGG 0.583445 1_1:+60759012 None:intergenic
TCGAGATCAATCGACTAGAC+CGG 0.585197 1_1:+60756445 None:intergenic
TGGATCCAGTTCTAGAACAA+GGG 0.585435 1_1:-60757198 Msa0033290:intron
GCAAGTGTTAACACTCACCT+TGG 0.587854 1_1:-60758132 Msa0033290:CDS
GATGATTTGGATTCAAGACC+TGG 0.588580 1_1:+60756387 None:intergenic
ATAAAGTGGTCTGGAGTCGA+GGG 0.588583 1_1:-60759323 Msa0033290:CDS
TTGGATCCAGTTCTAGAACA+AGG 0.591842 1_1:-60757199 Msa0033290:CDS
TGTTAATGTGCAAACTCAAG+AGG 0.593524 1_1:-60761119 Msa0033290:CDS
TAGAGGGGTCCCAAATGCAA+TGG 0.594829 1_1:+60755924 None:intergenic
TTGACGCAGAGAGAAGGGTA+AGG 0.595302 1_1:+60761554 None:intergenic
AGGAGCCACCCACTATTAGA+GGG 0.595602 1_1:+60755908 None:intergenic
TGCCTCACTCACCAACTCCA+AGG 0.596982 1_1:+60758115 None:intergenic
GTAAAATGAACAGGTGTGAC+GGG 0.600503 1_1:+60756223 None:intergenic
CTTCTCGAATGAATAGGTCC+CGG 0.601529 1_1:+60757365 None:intergenic
AGTAAAATGAACAGGTGTGA+CGG 0.603828 1_1:+60756222 None:intergenic
AGATAGATTATCTGGTGCAG+TGG 0.605958 1_1:-60756780 Msa0033290:CDS
AGCTCCTGTCAATTGGTACA+GGG 0.606402 1_1:-60756308 Msa0033290:CDS
AGGGAAAACAAGAATCTCAC+CGG 0.607679 1_1:-60758168 Msa0033290:CDS
CCATGAATGGACCACAACAC+AGG 0.608663 1_1:+60756185 None:intergenic
GTGGCTCCTAATTTAGATTG+GGG 0.609750 1_1:-60755894 Msa0033290:three_prime_UTR
TCCACTATTGCCGATCATTG+CGG 0.612017 1_1:-60757429 Msa0033290:CDS
CGAGGGTGAGTACAATGTCA+TGG 0.613445 1_1:-60759306 Msa0033290:CDS
AATGGAAGTGTGAATGATTG+TGG 0.614836 1_1:+60761662 None:intergenic
GGGACCCCTCTAATAGTGGG+TGG 0.614908 1_1:-60755913 Msa0033290:three_prime_UTR
GAAAATGAGCGAAAACTCGA+TGG 0.619282 1_1:-60756281 Msa0033290:exon
TTGGAAGGAAAATTGGAAGT+GGG 0.624857 1_1:-60761260 Msa0033290:CDS
TCTGATGGGTTTAGGCCGCA+AGG 0.625626 1_1:-60759027 Msa0033290:CDS
CAGCAGACCAAGCTCTTCTG+GGG 0.625732 1_1:-60756481 Msa0033290:CDS
GCTCGCAGTTCTACTCGCAA+TGG 0.627017 1_1:-60756534 Msa0033290:CDS
ACCCGTACCGCAGGGACACG+AGG 0.630056 1_1:-60756360 Msa0033290:CDS
GGGTCCCAAATGCAATGGAA+GGG 0.636237 1_1:+60755929 None:intergenic
CTAACCACATCTTTGGAAGA+CGG 0.637061 1_1:+60756695 None:intergenic
AGAGATGATCTAGAATCACT+TGG 0.637396 1_1:-60757970 Msa0033290:CDS
ACTACTCAGAGGGTTCAACC+AGG 0.654494 1_1:-60756405 Msa0033290:CDS
TTGTATATGCTTCTTCAAGG+AGG 0.656173 1_1:-60759676 Msa0033290:CDS
TAAGGATTTGGATCTGTGCG+TGG 0.657997 1_1:+60761572 None:intergenic
GTCGTCTATCGACTACTCAG+AGG 0.661119 1_1:-60756416 Msa0033290:CDS
TCGTCTATCGACTACTCAGA+GGG 0.669134 1_1:-60756415 Msa0033290:CDS
AAATGAACAGGTGTGACGGG+TGG 0.680166 1_1:+60756226 None:intergenic
CATCCTTTACCCGTACCGCA+GGG 0.680597 1_1:-60756368 Msa0033290:CDS
TATGCCGTCTTCCAAAGATG+TGG 0.681158 1_1:-60756699 Msa0033290:intron
GGAAGTGTGAATGATTGTGG+TGG 0.685924 1_1:+60761665 None:intergenic
GTAGAGTATATGCACTCTCG+GGG 0.691454 1_1:-60759083 Msa0033290:CDS
CATCTGGAGAGCGATTAGAA+CGG 0.692759 1_1:-60757059 Msa0033290:CDS
GGATTTGGATCTGTGCGTGG+AGG 0.715402 1_1:+60761575 None:intergenic
GGAGCCACCCACTATTAGAG+GGG 0.722209 1_1:+60755909 None:intergenic
GCGACCACCTCGTGTCCCTG+CGG 0.725612 1_1:+60756353 None:intergenic
ATAGATTATCTGGTGCAGTG+GGG 0.728220 1_1:-60756778 Msa0033290:CDS
CGTACCGCAGGGACACGAGG+TGG 0.738349 1_1:-60756357 Msa0033290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATCCAATTTTTATAAAAA+CGG + chr1_1:60755970-60755989 None:intergenic 10.0%
!!! TACTTTTTTTTTTTTTTTGA+GGG + chr1_1:60757382-60757401 None:intergenic 10.0%
!!! TTACTTTTTTTTTTTTTTTG+AGG + chr1_1:60757383-60757402 None:intergenic 10.0%
!! AAAGTTTCATTTAATTAAAT+TGG - chr1_1:60759301-60759320 Msa0033290:CDS 10.0%
!! AAGTTTCATTTAATTAAATT+GGG - chr1_1:60759302-60759321 Msa0033290:CDS 10.0%
!!! TTTTGTATAAATTCATTTTC+TGG - chr1_1:60755845-60755864 Msa0033290:three_prime_UTR 15.0%
!!! AATCCAATTTTTATAAAAAC+GGG + chr1_1:60755969-60755988 None:intergenic 15.0%
!!! TTTTATTGAATTTGTTATGA+TGG - chr1_1:60756032-60756051 Msa0033290:three_prime_UTR 15.0%
!!! TTAGTTGTTATTTTTGTTAA+CGG - chr1_1:60756455-60756474 Msa0033290:CDS 15.0%
!! TAAAAAACATGTAAACTTAA+AGG + chr1_1:60758842-60758861 None:intergenic 15.0%
!! AACAATTTATGTAAAGAATA+TGG + chr1_1:60759766-60759785 None:intergenic 15.0%
!!! TATCCCGTTTTTATAAAAAT+TGG - chr1_1:60755963-60755982 Msa0033290:three_prime_UTR 20.0%
!!! AGTAGTAAAATTCTGAATTT+TGG - chr1_1:60756001-60756020 Msa0033290:three_prime_UTR 20.0%
!!! GTAGTAAAATTCTGAATTTT+GGG - chr1_1:60756002-60756021 Msa0033290:three_prime_UTR 20.0%
!!! TAGTAAAATTCTGAATTTTG+GGG - chr1_1:60756003-60756022 Msa0033290:three_prime_UTR 20.0%
!! TCATTTGGAGAAATTTATTT+GGG - chr1_1:60756105-60756124 Msa0033290:three_prime_UTR 20.0%
!! TTTGAATAATTTGGAAACTT+TGG - chr1_1:60756184-60756203 Msa0033290:three_prime_UTR 20.0%
!!! TAGTTGTTATTTTTGTTAAC+GGG - chr1_1:60756456-60756475 Msa0033290:CDS 20.0%
!! GTAGTTTATGTACTTATTTA+TGG - chr1_1:60756888-60756907 Msa0033290:intron 20.0%
!!! AAGATTTGTTTACTTCTATT+AGG - chr1_1:60757084-60757103 Msa0033290:CDS 20.0%
!! TGAAAGATATAAATTCTGTT+CGG + chr1_1:60757129-60757148 None:intergenic 20.0%
!! TTATTGAATAAATAGGGAAA+TGG + chr1_1:60757335-60757354 None:intergenic 20.0%
!! ATGCAGTTATTGAATAAATA+GGG + chr1_1:60757341-60757360 None:intergenic 20.0%
!! TATGCAGTTATTGAATAAAT+AGG + chr1_1:60757342-60757361 None:intergenic 20.0%
!!! TTTTTTTTTTTTTTGAGGGA+GGG + chr1_1:60757378-60757397 None:intergenic 20.0%
!!! TTTTTTTTTTTTTTTGAGGG+AGG + chr1_1:60757379-60757398 None:intergenic 20.0%
!!! ACTTTAAAATATGCAAGTTT+TGG - chr1_1:60757489-60757508 Msa0033290:intron 20.0%
!!! TGTTAATTTATATTTGAAGC+TGG - chr1_1:60757986-60758005 Msa0033290:intron 20.0%
!!! TTAGCTTGAAGTTAAAAATA+TGG + chr1_1:60758184-60758203 None:intergenic 20.0%
!! AAAAAAATTAAAGGCCTATT+TGG + chr1_1:60758570-60758589 None:intergenic 20.0%
!!! AATAGGCCTTTAATTTTTTT+TGG - chr1_1:60758570-60758589 Msa0033290:intron 20.0%
!!! GATTTTCTTGTAATTATTAC+AGG - chr1_1:60758657-60758676 Msa0033290:CDS 20.0%
!!! TATATTGACTTTTTCTAACT+TGG - chr1_1:60759040-60759059 Msa0033290:CDS 20.0%
!! AAATTGTGAAAGATGAAAAT+TGG + chr1_1:60759820-60759839 None:intergenic 20.0%
!! TCTCTTAAGATATGAATAAT+CGG + chr1_1:60759952-60759971 None:intergenic 20.0%
!!! TTGTCTTTTGTTTTGTTTTT+TGG - chr1_1:60760702-60760721 Msa0033290:intron 20.0%
!! ATATATTGAGTAAAATGAAC+AGG + chr1_1:60761131-60761150 None:intergenic 20.0%
!! TTCTGTATTAATGTTTAACT+AGG - chr1_1:60761615-60761634 Msa0033290:five_prime_UTR 20.0%
! CTACAAAATCTCTACAATTT+CGG - chr1_1:60755724-60755743 Msa0033290:three_prime_UTR 25.0%
! GTCATTTGGAGAAATTTATT+TGG - chr1_1:60756104-60756123 Msa0033290:three_prime_UTR 25.0%
!!! CTAGTTAGTTGACTTTTAAA+TGG - chr1_1:60756426-60756445 Msa0033290:CDS 25.0%
!!! AGTTGTTATTTTTGTTAACG+GGG - chr1_1:60756457-60756476 Msa0033290:CDS 25.0%
! AGTACATAAACTACATAATC+CGG + chr1_1:60756882-60756901 None:intergenic 25.0%
! TGTACTTGTGTACTTATTTA+TGG - chr1_1:60756917-60756936 Msa0033290:intron 25.0%
! TAAGATATGAACTAAGTTGT+TGG - chr1_1:60757029-60757048 Msa0033290:intron 25.0%
! AATCTTGACAGAAATAGAAT+AGG - chr1_1:60757214-60757233 Msa0033290:CDS 25.0%
! ATCTTGACAGAAATAGAATA+GGG - chr1_1:60757215-60757234 Msa0033290:CDS 25.0%
! CTCTTCGAAAAAAAAAACTT+AGG + chr1_1:60757547-60757566 None:intergenic 25.0%
!! TTGAAGAAGCATATACAATT+TGG + chr1_1:60757664-60757683 None:intergenic 25.0%
! AAATTGTATATGCTTCTTCA+AGG - chr1_1:60757663-60757682 Msa0033290:intron 25.0%
!! AAACAAATCACTATTTTCTG+TGG - chr1_1:60757875-60757894 Msa0033290:intron 25.0%
! AAAGTGGTAAATCATATTGA+AGG + chr1_1:60758224-60758243 None:intergenic 25.0%
!! GTATCTAATGTATGACTTTT+CGG - chr1_1:60758346-60758365 Msa0033290:intron 25.0%
! TTTATTCCTGTAATTGACAT+CGG + chr1_1:60758496-60758515 None:intergenic 25.0%
!! TTTTACCTAGAAACAAGAAA+TGG - chr1_1:60758541-60758560 Msa0033290:intron 25.0%
! AGCACAATAAATTTAGTGAA+CGG + chr1_1:60758611-60758630 None:intergenic 25.0%
! AAAATCAGAAAACTTGACAT+AGG + chr1_1:60758643-60758662 None:intergenic 25.0%
! TAGCTAATATGAAATTTGGT+TGG - chr1_1:60758751-60758770 Msa0033290:intron 25.0%
! AGCTAATATGAAATTTGGTT+GGG - chr1_1:60758752-60758771 Msa0033290:intron 25.0%
! CAAATTAAGAAATCCAAAAG+GGG + chr1_1:60758891-60758910 None:intergenic 25.0%
! CCAAATTAAGAAATCCAAAA+GGG + chr1_1:60758892-60758911 None:intergenic 25.0%
! TCCAAATTAAGAAATCCAAA+AGG + chr1_1:60758893-60758912 None:intergenic 25.0%
! AATGTAAAGAGATGAAAAAC+TGG + chr1_1:60758959-60758978 None:intergenic 25.0%
!!! TGCACTATTTTTCTTACAAT+AGG - chr1_1:60759154-60759173 Msa0033290:intron 25.0%
!!! GCACTATTTTTCTTACAATA+GGG - chr1_1:60759155-60759174 Msa0033290:intron 25.0%
! TTTGCAAAGAATTAACAGTT+TGG - chr1_1:60759837-60759856 Msa0033290:intron 25.0%
! AAATATGATGTGAATTCTGT+TGG + chr1_1:60759894-60759913 None:intergenic 25.0%
! CTCTTAAGATATGAATAATC+GGG + chr1_1:60759951-60759970 None:intergenic 25.0%
! AGTTTGACTATGTATTTGAT+TGG - chr1_1:60760098-60760117 Msa0033290:intron 25.0%
!! ATATTGAAGTATCCACAAAT+TGG - chr1_1:60760124-60760143 Msa0033290:intron 25.0%
! AAATAGATTTCAAAACCTGA+AGG + chr1_1:60760309-60760328 None:intergenic 25.0%
! TATGCTGATAACACATTAAA+TGG - chr1_1:60760350-60760369 Msa0033290:intron 25.0%
! AATGAAAAAACTCTGATCAT+TGG - chr1_1:60760497-60760516 Msa0033290:intron 25.0%
!!! CTAATCCCTTTTATTTTAGT+CGG - chr1_1:60760527-60760546 Msa0033290:intron 25.0%
!! CACATGATTTTCTTTTTGTA+TGG - chr1_1:60760678-60760697 Msa0033290:intron 25.0%
!!! GAGAAATATCAATTAGCTTT+TGG + chr1_1:60761183-60761202 None:intergenic 25.0%
!!! ATTCTCTACAATTTTTCAGT+TGG - chr1_1:60761341-60761360 Msa0033290:five_prime_UTR 25.0%
!!! AATTTTTCAGTTGGACAAAA+GGG - chr1_1:60761350-60761369 Msa0033290:five_prime_UTR 25.0%
TTTGTAGGAAAGAAGGAAAA+TGG + chr1_1:60755711-60755730 None:intergenic 30.0%
! TAGAGATTTTGTAGGAAAGA+AGG + chr1_1:60755718-60755737 None:intergenic 30.0%
! CGAAATTGTAGAGATTTTGT+AGG + chr1_1:60755726-60755745 None:intergenic 30.0%
! GAAAAGAAAACCCTTTTACT+TGG + chr1_1:60755878-60755897 None:intergenic 30.0%
ATCGAAGTAAGAACAAATCT+GGG + chr1_1:60755905-60755924 None:intergenic 30.0%
AATCGAAGTAAGAACAAATC+TGG + chr1_1:60755906-60755925 None:intergenic 30.0%
!! GTTATGATGGATCTTGTTAT+TGG - chr1_1:60756045-60756064 Msa0033290:three_prime_UTR 30.0%
ATTGGTGGAAAATTCAAACT+TGG - chr1_1:60756063-60756082 Msa0033290:three_prime_UTR 30.0%
TTCAAACTTGGAAGGAAAAT+TGG - chr1_1:60756075-60756094 Msa0033290:three_prime_UTR 30.0%
! ACTTTGGATTTGTTTGTTTC+AGG - chr1_1:60756200-60756219 Msa0033290:three_prime_UTR 30.0%
GATGCATTGTATTGAAGTAA+TGG - chr1_1:60756354-60756373 Msa0033290:CDS 30.0%
!! TTTGACTTGAATTGTGTAAG+TGG - chr1_1:60756396-60756415 Msa0033290:CDS 30.0%
AAATAGTGATCGGAGTAATA+AGG + chr1_1:60756501-60756520 None:intergenic 30.0%
TATTACTCCGATCACTATTT+AGG - chr1_1:60756501-60756520 Msa0033290:CDS 30.0%
ATTACTCCGATCACTATTTA+GGG - chr1_1:60756502-60756521 Msa0033290:CDS 30.0%
GTACATAAACTACATAATCC+GGG + chr1_1:60756881-60756900 None:intergenic 30.0%
GTAAACAAATCTTGAAGCAA+GGG + chr1_1:60757077-60757096 None:intergenic 30.0%
AGTAAACAAATCTTGAAGCA+AGG + chr1_1:60757078-60757097 None:intergenic 30.0%
AAGAATGATTCTCAAAACAG+AGG - chr1_1:60757164-60757183 Msa0033290:intron 30.0%
GCTTTATGATGGTTATTTGT+TGG - chr1_1:60757518-60757537 Msa0033290:intron 30.0%
! ACTTTTCTCTACGTTTTCAT+TGG - chr1_1:60757590-60757609 Msa0033290:intron 30.0%
AGGAGGAAGTAAGTTTATAT+CGG - chr1_1:60757683-60757702 Msa0033290:intron 30.0%
!! CCAAAAGTGTTGTTAAATAG+CGG - chr1_1:60757726-60757745 Msa0033290:intron 30.0%
!!! CTTTTGAGTTCATCTGATTA+AGG - chr1_1:60757963-60757982 Msa0033290:CDS 30.0%
TTAAATAAGTCTTCGAGACT+TGG + chr1_1:60758079-60758098 None:intergenic 30.0%
ATACTCTACTCTGTTTATCT+AGG + chr1_1:60758248-60758267 None:intergenic 30.0%
AATCAGATTCTTAGAACTTG+AGG + chr1_1:60758438-60758457 None:intergenic 30.0%
ACAAGAAATGGAAACCAAAT+AGG - chr1_1:60758553-60758572 Msa0033290:intron 30.0%
GTGCTGCCAAAAAAAATTAA+AGG + chr1_1:60758579-60758598 None:intergenic 30.0%
ATTTAGTGAACGGGATTATA+TGG + chr1_1:60758601-60758620 None:intergenic 30.0%
GCACAATAAATTTAGTGAAC+GGG + chr1_1:60758610-60758629 None:intergenic 30.0%
! CAGGTATACATTATTGACTA+CGG - chr1_1:60758676-60758695 Msa0033290:intron 30.0%
TTTCATATTAGCTACCTGTA+TGG + chr1_1:60758745-60758764 None:intergenic 30.0%
CAGGTAGCTAATATGAAATT+TGG - chr1_1:60758747-60758766 Msa0033290:intron 30.0%
CAATATACTCAAGGAATCAA+AGG + chr1_1:60758794-60758813 None:intergenic 30.0%
CAAAAGGGGAAAAAATACAA+AGG + chr1_1:60758877-60758896 None:intergenic 30.0%
!!! CTTTGTATTTTTTCCCCTTT+TGG - chr1_1:60758875-60758894 Msa0033290:intron 30.0%
! CCCTTTTGGATTTCTTAATT+TGG - chr1_1:60758889-60758908 Msa0033290:intron 30.0%
ATCTGTTATTGCACATTCAT+TGG + chr1_1:60759021-60759040 None:intergenic 30.0%
!! GTACTAATGTACTTTTTGAG+AGG - chr1_1:60759399-60759418 Msa0033290:intron 30.0%
!! TAATGTACTTTTTGAGAGGA+AGG - chr1_1:60759403-60759422 Msa0033290:intron 30.0%
ACAGTTTGGATTTCTGTAAT+AGG - chr1_1:60759851-60759870 Msa0033290:intron 30.0%
TTTGGAAGAACTTTCAACTA+AGG + chr1_1:60760034-60760053 None:intergenic 30.0%
! ATAAGGTACTTTCAAAGCTT+TGG + chr1_1:60760052-60760071 None:intergenic 30.0%
! CAAAAGCGCAATTTCTAATA+AGG + chr1_1:60760069-60760088 None:intergenic 30.0%
! ATTAGAAATTGCGCTTTTGT+AGG - chr1_1:60760070-60760089 Msa0033290:intron 30.0%
TCATCCTCATCTATAAGTTA+TGG - chr1_1:60760186-60760205 Msa0033290:intron 30.0%
AGAACCATAACTTATAGATG+AGG + chr1_1:60760193-60760212 None:intergenic 30.0%
!!! GTTGGTGCTATTTTAATTCT+AGG - chr1_1:60760467-60760486 Msa0033290:intron 30.0%
CGACTAAAATAAAAGGGATT+AGG + chr1_1:60760529-60760548 None:intergenic 30.0%
CTTGTCCGACTAAAATAAAA+GGG + chr1_1:60760535-60760554 None:intergenic 30.0%
TCTTGTCCGACTAAAATAAA+AGG + chr1_1:60760536-60760555 None:intergenic 30.0%
GAAATTCGAGATAGATTATC+TGG - chr1_1:60760554-60760573 Msa0033290:intron 30.0%
! TATATTTCTATCCTGTGTTG+TGG - chr1_1:60761146-60761165 Msa0033290:intron 30.0%
AGATAAAGACTCTTCATGAA+TGG + chr1_1:60761273-60761292 None:intergenic 30.0%
CATGAAGAGTCTTTATCTTT+AGG - chr1_1:60761275-60761294 Msa0033290:CDS 30.0%
!! CAATTTTTCAGTTGGACAAA+AGG - chr1_1:60761349-60761368 Msa0033290:five_prime_UTR 30.0%
! GTTTTACCCCAATCTAAATT+AGG + chr1_1:60761457-60761476 None:intergenic 30.0%
TATCAGTGAACAAGAATGTT+TGG - chr1_1:60761491-60761510 Msa0033290:five_prime_UTR 30.0%
AAAAACTTCAAAACCTAAGG+AGG + chr1_1:60761519-60761538 None:intergenic 30.0%
AGCAAAAACTTCAAAACCTA+AGG + chr1_1:60761522-60761541 None:intergenic 30.0%
!!! TTAGGTTTTGAAGTTTTTGC+TGG - chr1_1:60761521-60761540 Msa0033290:five_prime_UTR 30.0%
TAGAAGACAAATGGAACATA+TGG + chr1_1:60761670-60761689 None:intergenic 30.0%
! AATGGAAGTGTGAATGATTG+TGG + chr1_1:60755683-60755702 None:intergenic 35.0%
AGAAGGAAAATGGATGAGAA+TGG + chr1_1:60755701-60755720 None:intergenic 35.0%
TGGAGTAGAACCAAGTAAAA+GGG - chr1_1:60755865-60755884 Msa0033290:three_prime_UTR 35.0%
TACTTCGATTCAACTAGTGA+TGG - chr1_1:60755916-60755935 Msa0033290:three_prime_UTR 35.0%
ACTTCGATTCAACTAGTGAT+GGG - chr1_1:60755917-60755936 Msa0033290:three_prime_UTR 35.0%
!! ATGATGGATCTTGTTATTGG+TGG - chr1_1:60756048-60756067 Msa0033290:three_prime_UTR 35.0%
GTGGAAAATTCAAACTTGGA+AGG - chr1_1:60756067-60756086 Msa0033290:three_prime_UTR 35.0%
TTGGAAGGAAAATTGGAAGT+GGG - chr1_1:60756082-60756101 Msa0033290:three_prime_UTR 35.0%
AAAATTGGAAGTGGGTCATT+TGG - chr1_1:60756090-60756109 Msa0033290:three_prime_UTR 35.0%
TGTTAATGTGCAAACTCAAG+AGG - chr1_1:60756223-60756242 Msa0033290:three_prime_UTR 35.0%
! TGGATTCATGTTGCATGTTT+TGG - chr1_1:60756279-60756298 Msa0033290:exon 35.0%
! ACAGGTATTTTGTCCAATTG+CGG + chr1_1:60756578-60756597 None:intergenic 35.0%
! GCATAGACACTTTTGATCAA+AGG - chr1_1:60756608-60756627 Msa0033290:intron 35.0%
TAATGAAGTTGCTACCAATG+CGG + chr1_1:60756800-60756819 None:intergenic 35.0%
CAAGTACTTAGGTAACTAGT+AGG + chr1_1:60756835-60756854 None:intergenic 35.0%
GTACAAGTACACAAGTACTT+AGG + chr1_1:60756846-60756865 None:intergenic 35.0%
ATAATCCGGGTAATGTGTAT+GGG + chr1_1:60756868-60756887 None:intergenic 35.0%
TGTAACATTTACAGAGCTGA+AGG + chr1_1:60757009-60757028 None:intergenic 35.0%
ATTAGGCATGTGATAGAAAC+TGG - chr1_1:60757101-60757120 Msa0033290:intron 35.0%
AATCCAAAATAAGTACCCAC+TGG - chr1_1:60757300-60757319 Msa0033290:intron 35.0%
AAATGGAATGAAAAGCCAGT+GGG + chr1_1:60757318-60757337 None:intergenic 35.0%
!! AAACTTTGAGACAGTGTCAT+TGG + chr1_1:60757465-60757484 None:intergenic 35.0%
AATGACACTGTCTCAAAGTT+TGG - chr1_1:60757464-60757483 Msa0033290:CDS 35.0%
!! TTTGGCTTTGTGCTTTATGA+TGG - chr1_1:60757507-60757526 Msa0033290:intron 35.0%
TTGTATATGCTTCTTCAAGG+AGG - chr1_1:60757666-60757685 Msa0033290:intron 35.0%
! CCGCTATTTAACAACACTTT+TGG + chr1_1:60757729-60757748 None:intergenic 35.0%
GTTGTCAAACAGTGCTATAA+CGG - chr1_1:60757823-60757842 Msa0033290:CDS 35.0%
AAGTAAACAGATGCAAATCC+TGG + chr1_1:60757924-60757943 None:intergenic 35.0%
CTGGAATACCTCATATAAAG+TGG - chr1_1:60758005-60758024 Msa0033290:intron 35.0%
ATACCTCATATAAAGTGGTC+TGG - chr1_1:60758010-60758029 Msa0033290:intron 35.0%
CTCTGTTTATCTAGGTAAAG+TGG + chr1_1:60758240-60758259 None:intergenic 35.0%
TAAACCCATCAGAAAGTTGT+CGG + chr1_1:60758308-60758327 None:intergenic 35.0%
TATGTCATGCTTAAATTCCC+TGG + chr1_1:60758400-60758419 None:intergenic 35.0%
CTATTTCCGATGTCAATTAC+AGG - chr1_1:60758487-60758506 Msa0033290:intron 35.0%
! GGTTTCCATTTCTTGTTTCT+AGG + chr1_1:60758549-60758568 None:intergenic 35.0%
!!! GATCACGATACTTTTTTGCA+AGG + chr1_1:60758702-60758721 None:intergenic 35.0%
CACATAAGCATATACCATAC+AGG - chr1_1:60758728-60758747 Msa0033290:intron 35.0%
AGACAAGGACAATATACTCA+AGG + chr1_1:60758803-60758822 None:intergenic 35.0%
AACTGTAGAAAGATGAGACA+AGG + chr1_1:60758818-60758837 None:intergenic 35.0%
! AACTGGATATGAAGTATCTC+AGG + chr1_1:60758942-60758961 None:intergenic 35.0%
GCACAAAACTCAATGAAAAC+TGG + chr1_1:60758999-60759018 None:intergenic 35.0%
! AGAGATGATCTAGAATCACT+TGG - chr1_1:60759372-60759391 Msa0033290:intron 35.0%
! AGTTAGAAAGTACAATGACG+AGG + chr1_1:60759465-60759484 None:intergenic 35.0%
CGTCATTGTACTTTCTAACT+TGG - chr1_1:60759465-60759484 Msa0033290:intron 35.0%
! TTTCTTTTTCCAGTCTTCCA+TGG - chr1_1:60759495-60759514 Msa0033290:intron 35.0%
GAAAATGCTTACTCCAATAG+AGG - chr1_1:60759571-60759590 Msa0033290:intron 35.0%
!! AAGCATTGAAGTACCTCTAT+TGG + chr1_1:60759587-60759606 None:intergenic 35.0%
AATACTCTACTTCGATGCTT+TGG - chr1_1:60759618-60759637 Msa0033290:intron 35.0%
TGCATGATGCAGAAAAAAGA+TGG + chr1_1:60759723-60759742 None:intergenic 35.0%
TATCTTCAAACCGCAATGAT+CGG + chr1_1:60759926-60759945 None:intergenic 35.0%
CATATCTTAAGAGACTCTTC+CGG - chr1_1:60759958-60759977 Msa0033290:intron 35.0%
ATATCTTAAGAGACTCTTCC+GGG - chr1_1:60759959-60759978 Msa0033290:intron 35.0%
GATAACCTTCTCGAATGAAT+AGG + chr1_1:60759986-60760005 None:intergenic 35.0%
! AGGTGTCATATTTAAGCAAG+TGG + chr1_1:60760441-60760460 None:intergenic 35.0%
AATATGACACCTTGCAAAGT+TGG - chr1_1:60760449-60760468 Msa0033290:intron 35.0%
AAAATAGCACCAACTTTGCA+AGG + chr1_1:60760461-60760480 None:intergenic 35.0%
GGTGGATGTCTCAAAAAAAA+AGG + chr1_1:60761101-60761120 None:intergenic 35.0%
AGTAAAATGAACAGGTGTGA+CGG + chr1_1:60761123-60761142 None:intergenic 35.0%
!!! AATTAGCTTTTGGCCATGAA+TGG + chr1_1:60761173-60761192 None:intergenic 35.0%
CTTCCATGATTATCTAAGCT+TGG - chr1_1:60761245-60761264 Msa0033290:CDS 35.0%
GAACCAAGCTTAGATAATCA+TGG + chr1_1:60761251-60761270 None:intergenic 35.0%
CTTGCAAAGCATATTAGACT+TGG + chr1_1:60761385-60761404 None:intergenic 35.0%
TGGAGTGTGTGTTTAACAAA+CGG + chr1_1:60761650-60761669 None:intergenic 35.0%
CTGGAGTAGAACCAAGTAAA+AGG - chr1_1:60755864-60755883 Msa0033290:three_prime_UTR 40.0%
CTTGGAAGGAAAATTGGAAG+TGG - chr1_1:60756081-60756100 Msa0033290:three_prime_UTR 40.0%
TCGGAGTAATAAGGAGATCA+TGG + chr1_1:60756492-60756511 None:intergenic 40.0%
CGTCATCCCTAAATAGTGAT+CGG + chr1_1:60756511-60756530 None:intergenic 40.0%
GATGACGATGAGTAGAGTTT+GGG - chr1_1:60756524-60756543 Msa0033290:CDS 40.0%
! TTTTGTCCAATTGCGGGTAA+GGG + chr1_1:60756571-60756590 None:intergenic 40.0%
! ATTTTGTCCAATTGCGGGTA+AGG + chr1_1:60756572-60756591 None:intergenic 40.0%
! CAGGTATTTTGTCCAATTGC+GGG + chr1_1:60756577-60756596 None:intergenic 40.0%
!! CAAAAGTGTCTATGCTACAG+TGG + chr1_1:60756603-60756622 None:intergenic 40.0%
!! CTTTTGATCAAAGGCATGTG+CGG - chr1_1:60756617-60756636 Msa0033290:intron 40.0%
ATGAACTACCGACAAAGACA+TGG + chr1_1:60756774-60756793 None:intergenic 40.0%
TTGTACCCATACACATTACC+CGG - chr1_1:60756860-60756879 Msa0033290:intron 40.0%
CATAATCCGGGTAATGTGTA+TGG + chr1_1:60756869-60756888 None:intergenic 40.0%
GTCATGCATATAGACAGAAG+GGG + chr1_1:60756953-60756972 None:intergenic 40.0%
GGTCATGCATATAGACAGAA+GGG + chr1_1:60756954-60756973 None:intergenic 40.0%
TGGTCATGCATATAGACAGA+AGG + chr1_1:60756955-60756974 None:intergenic 40.0%
AACCGAGATGTTCAAGAACT+TGG - chr1_1:60757258-60757277 Msa0033290:intron 40.0%
CACCAAGTTCTTGAACATCT+CGG + chr1_1:60757263-60757282 None:intergenic 40.0%
! AAGCCAGTGGGTACTTATTT+TGG + chr1_1:60757306-60757325 None:intergenic 40.0%
GAAATGGAATGAAAAGCCAG+TGG + chr1_1:60757319-60757338 None:intergenic 40.0%
!!! TACGTTTTCATTGGCTTCTC+AGG - chr1_1:60757599-60757618 Msa0033290:intron 40.0%
ATAGCAGCGCTATAGTTTAG+TGG - chr1_1:60757751-60757770 Msa0033290:intron 40.0%
ACTCCAGACCACTTTATATG+AGG + chr1_1:60758016-60758035 None:intergenic 40.0%
GAGTAGAGTATATGCACTCT+CGG - chr1_1:60758257-60758276 Msa0033290:intron 40.0%
AGTAGAGTATATGCACTCTC+GGG - chr1_1:60758258-60758277 Msa0033290:intron 40.0%
AAACCCATCAGAAAGTTGTC+GGG + chr1_1:60758307-60758326 None:intergenic 40.0%
!! GACAACTTTCTGATGGGTTT+AGG - chr1_1:60758307-60758326 Msa0033290:intron 40.0%
! TAGATACCTGATTTGCCTTG+CGG + chr1_1:60758333-60758352 None:intergenic 40.0%
AAGCATGACATACCTCTAAC+TGG - chr1_1:60758408-60758427 Msa0033290:intron 40.0%
TTCCACTCCTGTTACATGAA+CGG - chr1_1:60759130-60759149 Msa0033290:intron 40.0%
AGGGAAAACAAGAATCTCAC+CGG - chr1_1:60759174-60759193 Msa0033290:intron 40.0%
!! GTACTTTTTGAGAGGAAGGT+TGG - chr1_1:60759407-60759426 Msa0033290:intron 40.0%
!! TTTTTGAGAGGAAGGTTGGT+TGG - chr1_1:60759411-60759430 Msa0033290:intron 40.0%
CTAGAACTGGATCCAATTTG+TGG + chr1_1:60760139-60760158 None:intergenic 40.0%
!! TTGGATCCAGTTCTAGAACA+AGG - chr1_1:60760143-60760162 Msa0033290:intron 40.0%
!! TGGATCCAGTTCTAGAACAA+GGG - chr1_1:60760144-60760163 Msa0033290:intron 40.0%
!! TTTAAGGCTGGTTTCACACT+TGG + chr1_1:60760255-60760274 None:intergenic 40.0%
AGATAGATTATCTGGTGCAG+TGG - chr1_1:60760562-60760581 Msa0033290:intron 40.0%
GATAGATTATCTGGTGCAGT+GGG - chr1_1:60760563-60760582 Msa0033290:intron 40.0%
ATAGATTATCTGGTGCAGTG+GGG - chr1_1:60760564-60760583 Msa0033290:intron 40.0%
! CTAACCACATCTTTGGAAGA+CGG + chr1_1:60760650-60760669 None:intergenic 40.0%
! AATTTCTTGCTGTCCAACAC+TGG - chr1_1:60760757-60760776 Msa0033290:intron 40.0%
TTGCTACAAAGATCCAGTGT+TGG + chr1_1:60760773-60760792 None:intergenic 40.0%
TGTAGCAACCTGATTCTGAT+AGG - chr1_1:60760785-60760804 Msa0033290:intron 40.0%
GTAGCAACCTGATTCTGATA+GGG - chr1_1:60760786-60760805 Msa0033290:intron 40.0%
! GATGATTTGGATTCAAGACC+TGG + chr1_1:60760958-60760977 None:intergenic 40.0%
! TTTTCCCTGTACCAATTGAC+AGG + chr1_1:60761041-60761060 None:intergenic 40.0%
GAAAATGAGCGAAAACTCGA+TGG - chr1_1:60761061-60761080 Msa0033290:intron 40.0%
GTAAAATGAACAGGTGTGAC+GGG + chr1_1:60761122-60761141 None:intergenic 40.0%
!! GCATCTGAAGAAGCATTTGA+GGG + chr1_1:60761224-60761243 None:intergenic 40.0%
!! AGCATCTGAAGAAGCATTTG+AGG + chr1_1:60761225-60761244 None:intergenic 40.0%
TATCACCCTTCCATTGCATT+TGG - chr1_1:60761408-60761427 Msa0033290:five_prime_UTR 40.0%
ATCACCCTTCCATTGCATTT+GGG - chr1_1:60761409-60761428 Msa0033290:five_prime_UTR 40.0%
GGTGGCTCCTAATTTAGATT+GGG - chr1_1:60761447-60761466 Msa0033290:five_prime_UTR 40.0%
GTGGCTCCTAATTTAGATTG+GGG - chr1_1:60761448-60761467 Msa0033290:five_prime_UTR 40.0%
! GGAAGTGTGAATGATTGTGG+TGG + chr1_1:60755680-60755699 None:intergenic 45.0%
TAAGGATTTGGATCTGTGCG+TGG + chr1_1:60755773-60755792 None:intergenic 45.0%
CAGAGAGAAGGGTAAGGATT+TGG + chr1_1:60755785-60755804 None:intergenic 45.0%
CGATATTGACGCAGAGAGAA+GGG + chr1_1:60755796-60755815 None:intergenic 45.0%
! AGAGGAAGTTGCTGTTAAGC+TGG - chr1_1:60756241-60756260 Msa0033290:three_prime_UTR 45.0%
GCTGGTGAGTGAAGTTGTTA+TGG - chr1_1:60756259-60756278 Msa0033290:three_prime_UTR 45.0%
GGATGACGATGAGTAGAGTT+TGG - chr1_1:60756523-60756542 Msa0033290:CDS 45.0%
TTTGTCCAATTGCGGGTAAG+GGG + chr1_1:60756570-60756589 None:intergenic 45.0%
GTCTATGCTACAGTGGATAC+AGG + chr1_1:60756596-60756615 None:intergenic 45.0%
CGGTAGTTCATTATCCGCAT+TGG - chr1_1:60756783-60756802 Msa0033290:CDS 45.0%
CATAGTTAAGCAGAGTCGTG+TGG + chr1_1:60756980-60756999 None:intergenic 45.0%
TGAGGATGCTTTGTCTTCAC+AGG + chr1_1:60757627-60757646 None:intergenic 45.0%
TTGGACTCGTAGAGAAGTTG+AGG + chr1_1:60757645-60757664 None:intergenic 45.0%
GCTATAGCACTATTGCGTAG+CGG - chr1_1:60757847-60757866 Msa0033290:intron 45.0%
! TATAAAGTGGTCTGGAGTCG+AGG - chr1_1:60758018-60758037 Msa0033290:intron 45.0%
! ATAAAGTGGTCTGGAGTCGA+GGG - chr1_1:60758019-60758038 Msa0033290:intron 45.0%
ACTTGGTCCAAGAAGGTCAA+TGG + chr1_1:60758062-60758081 None:intergenic 45.0%
GTAGAGTATATGCACTCTCG+GGG - chr1_1:60758259-60758278 Msa0033290:intron 45.0%
AAAGCCCGACAACTTTCTGA+TGG - chr1_1:60758300-60758319 Msa0033290:intron 45.0%
AAGCCCGACAACTTTCTGAT+GGG - chr1_1:60758301-60758320 Msa0033290:intron 45.0%
TATTTGTGCGCATATCTGCC+AGG - chr1_1:60758379-60758398 Msa0033290:intron 45.0%
ATTTGTGCGCATATCTGCCA+GGG - chr1_1:60758380-60758399 Msa0033290:intron 45.0%
ACTTGAGGAATGCCAGTTAG+AGG + chr1_1:60758423-60758442 None:intergenic 45.0%
AACCGTTCATGTAACAGGAG+TGG + chr1_1:60759135-60759154 None:intergenic 45.0%
AGTGCAACCGTTCATGTAAC+AGG + chr1_1:60759140-60759159 None:intergenic 45.0%
ACTTGCATATCGAGCAGTTC+CGG + chr1_1:60759196-60759215 None:intergenic 45.0%
GCAAGTGTTAACACTCACCT+TGG - chr1_1:60759210-60759229 Msa0033290:intron 45.0%
GTTAACACTCACCTTGGAGT+TGG - chr1_1:60759216-60759235 Msa0033290:CDS 45.0%
! TTTTCCAGTCTTCCATGGCA+AGG - chr1_1:60759500-60759519 Msa0033290:intron 45.0%
TCCACTATTGCCGATCATTG+CGG - chr1_1:60759913-60759932 Msa0033290:intron 45.0%
CTTCTCGAATGAATAGGTCC+CGG + chr1_1:60759980-60759999 None:intergenic 45.0%
!! ACTCACCCTTGTTCTAGAAC+TGG + chr1_1:60760152-60760171 None:intergenic 45.0%
CATCTGGAGAGCGATTAGAA+CGG - chr1_1:60760283-60760302 Msa0033290:intron 45.0%
TAGATTATCTGGTGCAGTGG+GGG - chr1_1:60760565-60760584 Msa0033290:intron 45.0%
!! GGGGCATTTTCAAGAAGGAA+TGG - chr1_1:60760584-60760603 Msa0033290:intron 45.0%
TATGCCGTCTTCCAAAGATG+TGG - chr1_1:60760643-60760662 Msa0033290:intron 45.0%
! GGTCTGCTGCTTGATATCAT+TGG + chr1_1:60760850-60760869 None:intergenic 45.0%
TCGAGATCAATCGACTAGAC+CGG + chr1_1:60760900-60760919 None:intergenic 45.0%
! TCGTCTATCGACTACTCAGA+GGG - chr1_1:60760927-60760946 Msa0033290:intron 45.0%
GGTACGGGTAAAGGATGATT+TGG + chr1_1:60760971-60760990 None:intergenic 45.0%
!! AGCTTTGAGCTCCTGTCAAT+TGG - chr1_1:60761027-60761046 Msa0033290:intron 45.0%
AGCTCCTGTCAATTGGTACA+GGG - chr1_1:60761034-60761053 Msa0033290:intron 45.0%
! ATTTGGGACCCCTCTAATAG+TGG - chr1_1:60761425-60761444 Msa0033290:five_prime_UTR 45.0%
! TTTGGGACCCCTCTAATAGT+GGG - chr1_1:60761426-60761445 Msa0033290:five_prime_UTR 45.0%
GGGTGGCTCCTAATTTAGAT+TGG - chr1_1:60761446-60761465 Msa0033290:five_prime_UTR 45.0%
! AGAATGTTTGGAGCCTCCTT+AGG - chr1_1:60761503-60761522 Msa0033290:five_prime_UTR 45.0%
!! AAAAAAAAAAAAAATCTAAT+GGG + chr1_1:60755826-60755845 None:intergenic 5.0%
!! AAAAAAAAAAAAAAATCTAA+TGG + chr1_1:60755827-60755846 None:intergenic 5.0%
!! TAATTTATATTTGAATAATT+TGG - chr1_1:60756175-60756194 Msa0033290:three_prime_UTR 5.0%
!!! AGTATTTTTATTATATTATT+AGG + chr1_1:60757412-60757431 None:intergenic 5.0%
TTGACGCAGAGAGAAGGGTA+AGG + chr1_1:60755791-60755810 None:intergenic 50.0%
GCGATATTGACGCAGAGAGA+AGG + chr1_1:60755797-60755816 None:intergenic 50.0%
ACGATGAGTAGAGTTTGGGC+AGG - chr1_1:60756528-60756547 Msa0033290:CDS 50.0%
CGATGAGTAGAGTTTGGGCA+GGG - chr1_1:60756529-60756548 Msa0033290:CDS 50.0%
GTCAGACAGTGACACGATGT+GGG + chr1_1:60756646-60756665 None:intergenic 50.0%
AGTCAGACAGTGACACGATG+TGG + chr1_1:60756647-60756666 None:intergenic 50.0%
TGACACGAACACGTCAACAC+GGG + chr1_1:60756728-60756747 None:intergenic 50.0%
CTGACACGAACACGTCAACA+CGG + chr1_1:60756729-60756748 None:intergenic 50.0%
CCTGGTGTCCATGTCTTTGT+CGG - chr1_1:60756763-60756782 Msa0033290:CDS 50.0%
TTAAGCAGAGTCGTGTGGTG+TGG + chr1_1:60756975-60756994 None:intergenic 50.0%
TGGTACGCGATTTACAGCAC+TGG - chr1_1:60757895-60757914 Msa0033290:intron 50.0%
CGAGGGTGAGTACAATGTCA+TGG - chr1_1:60758036-60758055 Msa0033290:intron 50.0%
GTCATGGCCATTGACCTTCT+TGG - chr1_1:60758052-60758071 Msa0033290:intron 50.0%
! CTTCGAGACTTGGTCCAAGA+AGG + chr1_1:60758069-60758088 None:intergenic 50.0%
TTTAGGCCGCAAGGCAAATC+AGG - chr1_1:60758324-60758343 Msa0033290:intron 50.0%
ACCGCAATGATCGGCAATAG+TGG + chr1_1:60759917-60759936 None:intergenic 50.0%
CGGGACCTATTCATTCGAGA+AGG - chr1_1:60759978-60759997 Msa0033290:intron 50.0%
GTGAAACCAGCCTTAAACCC+AGG - chr1_1:60760258-60760277 Msa0033290:intron 50.0%
TCCAGATGGTCCTGGGTTTA+AGG + chr1_1:60760271-60760290 None:intergenic 50.0%
CGTTCTAATCGCTCTCCAGA+TGG + chr1_1:60760285-60760304 None:intergenic 50.0%
!!! CAGTGGGGGCATTTTCAAGA+AGG - chr1_1:60760579-60760598 Msa0033290:intron 50.0%
GCAATGGCAGTGCTTCGAAA+AGG - chr1_1:60760824-60760843 Msa0033290:intron 50.0%
! GTCGTCTATCGACTACTCAG+AGG - chr1_1:60760926-60760945 Msa0033290:intron 50.0%
ACTACTCAGAGGGTTCAACC+AGG - chr1_1:60760937-60760956 Msa0033290:intron 50.0%
GAGCTCCTGTCAATTGGTAC+AGG - chr1_1:60761033-60761052 Msa0033290:intron 50.0%
! AAATGAACAGGTGTGACGGG+TGG + chr1_1:60761119-60761138 None:intergenic 50.0%
CCATGAATGGACCACAACAC+AGG + chr1_1:60761160-60761179 None:intergenic 50.0%
CCTGTGTTGTGGTCCATTCA+TGG - chr1_1:60761157-60761176 Msa0033290:intron 50.0%
GGGTCCCAAATGCAATGGAA+GGG + chr1_1:60761416-60761435 None:intergenic 50.0%
TAGAGGGGTCCCAAATGCAA+TGG + chr1_1:60761421-60761440 None:intergenic 50.0%
AGGAGCCACCCACTATTAGA+GGG + chr1_1:60761437-60761456 None:intergenic 50.0%
TAGGAGCCACCCACTATTAG+AGG + chr1_1:60761438-60761457 None:intergenic 50.0%
GGATTTGGATCTGTGCGTGG+AGG + chr1_1:60755770-60755789 None:intergenic 55.0%
CTTGTCCCCTTACCCGCAAT+TGG - chr1_1:60756562-60756581 Msa0033290:intron 55.0%
CCGACAAAGACATGGACACC+AGG + chr1_1:60756766-60756785 None:intergenic 55.0%
!! GATTTACAGCACTGGCAGCC+AGG - chr1_1:60757903-60757922 Msa0033290:intron 55.0%
!! TCTGATGGGTTTAGGCCGCA+AGG - chr1_1:60758315-60758334 Msa0033290:intron 55.0%
!! CACCTTGGAGTTGGTGAGTG+AGG - chr1_1:60759225-60759244 Msa0033290:CDS 55.0%
TGCCTCACTCACCAACTCCA+AGG + chr1_1:60759230-60759249 None:intergenic 55.0%
CATGCCTTGCCATGGAAGAC+TGG + chr1_1:60759507-60759526 None:intergenic 55.0%
CCAGCTTTCATGCCTTGCCA+TGG + chr1_1:60759515-60759534 None:intergenic 55.0%
CCATGGCAAGGCATGAAAGC+TGG - chr1_1:60759512-60759531 Msa0033290:intron 55.0%
! GATGGTCCTGGGTTTAAGGC+TGG + chr1_1:60760267-60760286 None:intergenic 55.0%
GCCTTAAACCCAGGACCATC+TGG - chr1_1:60760267-60760286 Msa0033290:intron 55.0%
ATCGCTCTCCAGATGGTCCT+GGG + chr1_1:60760278-60760297 None:intergenic 55.0%
AATCGCTCTCCAGATGGTCC+TGG + chr1_1:60760279-60760298 None:intergenic 55.0%
GAGCGATTAGAACGGCCTTC+AGG - chr1_1:60760291-60760310 Msa0033290:intron 55.0%
! AGAAGGAATGGCTCTGCGCA+AGG - chr1_1:60760596-60760615 Msa0033290:intron 55.0%
CTGCGAGCCCTATCAGAATC+AGG + chr1_1:60760796-60760815 None:intergenic 55.0%
GCTCGCAGTTCTACTCGCAA+TGG - chr1_1:60760808-60760827 Msa0033290:intron 55.0%
AGCAGCAGACCAAGCTCTTC+TGG - chr1_1:60760859-60760878 Msa0033290:intron 55.0%
GCAGCAGACCAAGCTCTTCT+GGG - chr1_1:60760860-60760879 Msa0033290:intron 55.0%
CAGCAGACCAAGCTCTTCTG+GGG - chr1_1:60760861-60760880 Msa0033290:intron 55.0%
CTAGGTTCCCCAGAAGAGCT+TGG + chr1_1:60760871-60760890 None:intergenic 55.0%
CTGGGGAACCTAGTGAAAGC+CGG - chr1_1:60760878-60760897 Msa0033290:intron 55.0%
! CGACTAGACCGGCTTTCACT+AGG + chr1_1:60760889-60760908 None:intergenic 55.0%
TCATCCTTTACCCGTACCGC+AGG - chr1_1:60760973-60760992 Msa0033290:intron 55.0%
CATCCTTTACCCGTACCGCA+GGG - chr1_1:60760974-60760993 Msa0033290:intron 55.0%
GGGGTCCCAAATGCAATGGA+AGG + chr1_1:60761417-60761436 None:intergenic 55.0%
GGAGCCACCCACTATTAGAG+GGG + chr1_1:60761436-60761455 None:intergenic 55.0%
GGATCTGTGCGTGGAGGTGA+AGG + chr1_1:60755764-60755783 None:intergenic 60.0%
! TCAGTGTCGAGTGTCGTGCC+TGG - chr1_1:60756745-60756764 Msa0033290:CDS 60.0%
CTGCGCAAGGACTGCAGCAT+AGG - chr1_1:60760609-60760628 Msa0033290:intron 60.0%
TGTCCCTGCGGTACGGGTAA+AGG + chr1_1:60760980-60760999 None:intergenic 60.0%
! GGGACCCCTCTAATAGTGGG+TGG - chr1_1:60761429-60761448 Msa0033290:five_prime_UTR 60.0%
ACCTCGTGTCCCTGCGGTAC+GGG + chr1_1:60760986-60761005 None:intergenic 65.0%
CACCTCGTGTCCCTGCGGTA+CGG + chr1_1:60760987-60761006 None:intergenic 65.0%
ACCCGTACCGCAGGGACACG+AGG - chr1_1:60760982-60761001 Msa0033290:intron 70.0%
CGTACCGCAGGGACACGAGG+TGG - chr1_1:60760985-60761004 Msa0033290:intron 70.0%
GCGACCACCTCGTGTCCCTG+CGG + chr1_1:60760992-60761011 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 60755673 60761691 60755673 ID=Msa0033290;Name=Msa0033290
chr1_1 mRNA 60755673 60761691 60755673 ID=Msa0033290-mRNA-1;Parent=Msa0033290;Name=Msa0033290-mRNA-1;_AED=0.15;_eAED=0.15;_QI=375|1|1|1|1|1|14|623|458
chr1_1 exon 60755673 60756574 60755673 ID=Msa0033290-mRNA-1:exon:19044;Parent=Msa0033290-mRNA-1
chr1_1 exon 60756700 60756818 60756700 ID=Msa0033290-mRNA-1:exon:19043;Parent=Msa0033290-mRNA-1
chr1_1 exon 60757052 60757112 60757052 ID=Msa0033290-mRNA-1:exon:19042;Parent=Msa0033290-mRNA-1
chr1_1 exon 60757199 60757272 60757199 ID=Msa0033290-mRNA-1:exon:19041;Parent=Msa0033290-mRNA-1
chr1_1 exon 60757365 60757491 60757365 ID=Msa0033290-mRNA-1:exon:19040;Parent=Msa0033290-mRNA-1
chr1_1 exon 60757772 60757856 60757772 ID=Msa0033290-mRNA-1:exon:19039;Parent=Msa0033290-mRNA-1
chr1_1 exon 60757940 60758003 60757940 ID=Msa0033290-mRNA-1:exon:19038;Parent=Msa0033290-mRNA-1
chr1_1 exon 60758127 60758188 60758127 ID=Msa0033290-mRNA-1:exon:19037;Parent=Msa0033290-mRNA-1
chr1_1 exon 60758615 60758685 60758615 ID=Msa0033290-mRNA-1:exon:19036;Parent=Msa0033290-mRNA-1
chr1_1 exon 60759019 60759114 60759019 ID=Msa0033290-mRNA-1:exon:19035;Parent=Msa0033290-mRNA-1
chr1_1 exon 60759211 60759359 60759211 ID=Msa0033290-mRNA-1:exon:19034;Parent=Msa0033290-mRNA-1
chr1_1 exon 60759674 60759743 60759674 ID=Msa0033290-mRNA-1:exon:19033;Parent=Msa0033290-mRNA-1
chr1_1 exon 60761102 60761142 60761102 ID=Msa0033290-mRNA-1:exon:19032;Parent=Msa0033290-mRNA-1
chr1_1 exon 60761238 60761691 60761238 ID=Msa0033290-mRNA-1:exon:19031;Parent=Msa0033290-mRNA-1
chr1_1 five_prime_UTR 60761317 60761691 60761317 ID=Msa0033290-mRNA-1:five_prime_utr;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60761238 60761316 60761238 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60761102 60761142 60761102 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60759674 60759743 60759674 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60759211 60759359 60759211 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60759019 60759114 60759019 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60758615 60758685 60758615 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60758127 60758188 60758127 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60757940 60758003 60757940 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60757772 60757856 60757772 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60757365 60757491 60757365 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60757199 60757272 60757199 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60757052 60757112 60757052 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60756700 60756818 60756700 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 CDS 60756296 60756574 60756296 ID=Msa0033290-mRNA-1:cds;Parent=Msa0033290-mRNA-1
chr1_1 three_prime_UTR 60755673 60756295 60755673 ID=Msa0033290-mRNA-1:three_prime_utr;Parent=Msa0033290-mRNA-1
Gene Sequence

>Msa0033290

ATGATGGATCTTGTTATTGGTGGAAAATTCAAACTTGGAAGGAAAATTGGAAGTGGGTCATTTGGAGAAATTTATTTGGGTGTTAATGTGCAAACTCAAGAGGAAGTTGCTGTTAAGCTGGAACCTGTGAAGACAAAGCATCCTCAACTTCTCTACGAGTCCAAATTGTATATGCTTCTTCAAGGAGGAACTGGAATACCTCATATAAAGTGGTCTGGAGTCGAGGGTGAGTACAATGTCATGGCCATTGACCTTCTTGGACCAAGTCTCGAAGACTTATTTAACTATTGTAGTAGAAAATTCTCTCTGAAGACAGTGTTGATGCTTGCTGATCAACTAATAAACAGAGTAGAGTATATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCCGACAACTTTCTGATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATTATTGACTACGGCCTTGCAAAAAAGTATCGTGATCTTCAGACACATAAGCATATACCATACAGGGAAAACAAGAATCTCACCGGAACTGCTCGATATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTACTAATGTACTTTTTGAGAGGAAGTCTTCCATGGCAAGGCATGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATAAGTGAAAAGAAAATGCTTACTCCAATAGAGGTATTGTGCAAGTCTCATCCAACAGAATTCACATCATATTTCCACTATTGCCGATCATTGCGGTTTGAAGATAAACCCGATTATTCATATCTTAAGAGACTCTTCCGGGACCTATTCATTCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAGTATCCACAAATTGGATCCAGTTCTAGAACAAGGCCAAGTGTGAAACCAGCCTTAAACCCAGGACCATCTGGAGAGCGATTAGAACGGCCTTCAGTCGGACAAGAAATTCGAGATAGATTATCTGGTGCAGTGGGGGCATTTTCAAGAAGGAATGGCTCTGCGCAAGGACTGCAGCATAGGTCTCTAGATAATATGCCGTCTTCCAAAGATGTGCAACCTGATTCTGATAGGGCTCGCAGTTCTACTCGCAATGGCAGTGCTTCGAAAAGGCCAATGATATCAAGCAGCAGACCAAGCTCTTCTGGGGAACCTAGTGAAAGCCGGTCTAGTCGATTGATCTCGAGCAGTAGTCGTCTATCGACTACTCAGAGGGTTCAACCAGGTCTTGAATCCAAATCATCCTTTACCCGTACCGCAGGGACACGAGGTGGTCGCGATGATACACTCAAGAGCTTTGAGCTCCTGTCAATTGGTACAGGGAAAAGAAAATGA
Protein sequence

>Msa0033290

MMDLVIGGKFKLGRKIGSGSFGEIYLGVNVQTQEEVAVKLEPVKTKHPQLLYESKLYMLLQGGTGIPHIKWSGVEGEYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGMKAGTKKQKYDKISEKKMLTPIEVLCKSHPTEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSVKPALNPGPSGERLERPSVGQEIRDRLSGAVGAFSRRNGSAQGLQHRSLDNMPSSKDVQPDSDRARSSTRNGSASKRPMISSSRPSSSGEPSESRSSRLISSSSRLSTTQRVQPGLESKSSFTRTAGTRGGRDDTLKSFELLSIGTGKRK*