AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0033370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0033370 MtrunA17_Chr1g0166821 100.000 458 0 0 1 458 1 458 0.0 939
Msa0033370 MtrunA17_Chr1g0187571 86.237 465 56 3 1 458 1 464 0.0 772
Msa0033370 MtrunA17_Chr7g0261501 77.223 461 95 6 2 452 1 461 0.0 699
Msa0033370 MtrunA17_Chr1g0183631 72.174 460 111 7 2 452 1 452 0.0 666
Msa0033370 MtrunA17_Chr1g0167261 74.731 372 66 4 1 368 1 348 0.0 553
Msa0033370 MtrunA17_Chr2g0329981 64.665 433 122 7 2 424 1 412 0.0 550
Msa0033370 MtrunA17_Chr4g0071031 75.811 339 76 3 2 340 1 333 0.0 548
Msa0033370 MtrunA17_Chr8g0342821 60.851 470 162 8 2 452 1 467 0.0 543
Msa0033370 MtrunA17_Chr8g0390211 61.772 429 145 8 2 420 1 420 0.0 524
Msa0033370 MtrunA17_Chr6g0486611 62.937 429 133 10 2 416 1 417 0.0 524
Msa0033370 MtrunA17_Chr2g0299661 57.816 467 178 8 2 452 1 464 4.85e-180 511
Msa0033370 MtrunA17_Chr1g0146151 54.801 427 177 4 2 420 1 419 4.17e-167 477
Msa0033370 MtrunA17_Chr3g0140071 54.853 443 161 6 2 418 1 430 7.05e-166 474
Msa0033370 MtrunA17_Chr7g0214531 39.649 285 153 6 6 274 31 312 2.24e-60 207
Msa0033370 MtrunA17_Chr3g0140431 38.710 279 158 6 6 274 32 307 2.69e-57 199
Msa0033370 MtrunA17_Chr1g0213321 38.028 284 162 6 6 278 113 393 5.79e-57 199
Msa0033370 MtrunA17_Chr1g0146301 37.276 279 162 6 6 274 118 393 9.15e-56 196
Msa0033370 MtrunA17_Chr7g0253211 37.234 282 161 5 10 278 324 602 1.58e-53 192
Msa0033370 MtrunA17_Chr8g0340491 37.234 282 155 6 10 274 128 404 4.75e-51 183
Msa0033370 MtrunA17_Chr3g0107051 31.050 219 129 8 6 215 17 222 1.48e-13 72.4
Msa0033370 MtrunA17_Chr4g0075541 27.305 282 175 10 12 282 89 351 2.60e-13 71.2
Msa0033370 MtrunA17_Chr5g0405421 25.000 224 151 6 9 224 98 312 1.78e-12 69.3
Msa0033370 MtrunA17_Chr7g0267751 27.189 217 134 8 10 216 135 337 1.04e-11 67.0
Msa0033370 MtrunA17_Chr7g0245031 33.871 124 69 4 108 229 250 362 2.17e-11 65.9
Msa0033370 MtrunA17_Chr7g0272841 24.537 216 144 4 9 214 67 273 4.50e-11 65.1
Msa0033370 MtrunA17_Chr4g0001331 30.667 225 126 12 5 216 15 222 4.93e-11 64.7
Msa0033370 MtrunA17_Chr4g0072831 30.719 153 74 6 8 154 8 134 5.63e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0033370 AT3G23340.1 77.293 458 87 4 2 458 1 442 0.0 720
Msa0033370 AT4G14340.1 75.431 464 93 5 2 458 7 456 0.0 716
Msa0033370 AT3G23340.2 74.672 458 85 5 2 458 1 428 0.0 686
Msa0033370 AT5G43320.1 72.500 480 109 8 2 458 1 480 0.0 682
Msa0033370 AT1G04440.1 71.581 468 122 3 2 458 1 468 0.0 674
Msa0033370 AT4G28540.1 71.639 476 107 9 2 452 5 477 0.0 663
Msa0033370 AT1G03930.1 73.517 472 101 9 2 452 1 469 0.0 649
Msa0033370 AT5G44100.1 71.158 475 112 6 2 452 1 474 0.0 629
Msa0033370 AT5G44100.2 71.158 475 112 6 2 452 1 474 0.0 629
Msa0033370 AT4G14340.2 86.196 326 44 1 2 326 7 332 0.0 600
Msa0033370 AT5G43320.2 82.883 333 46 2 2 326 1 330 0.0 573
Msa0033370 AT5G43320.3 82.883 333 46 2 2 326 1 330 0.0 573
Msa0033370 AT1G72710.1 69.895 382 105 5 2 377 1 378 0.0 545
Msa0033370 AT4G26100.1 65.385 416 112 8 2 412 1 389 0.0 539
Msa0033370 AT5G57015.1 77.143 315 69 1 2 316 1 312 0.0 531
Msa0033370 AT2G19470.1 73.795 332 80 3 2 327 1 331 0.0 524
Msa0033370 AT4G28860.1 62.010 408 123 8 2 391 1 394 2.94e-176 500
Msa0033370 AT4G28880.3 72.930 314 85 0 2 315 1 314 3.36e-176 500
Msa0033370 AT4G28880.2 72.930 314 85 0 2 315 1 314 3.36e-176 500
Msa0033370 AT4G28880.1 72.930 314 85 0 2 315 1 314 3.36e-176 500
Msa0033370 AT4G28880.4 72.930 314 85 0 2 315 1 314 3.36e-176 500
Msa0033370 AT4G28860.2 72.188 320 84 2 2 321 1 315 7.54e-176 498
Msa0033370 AT4G08800.1 66.107 298 69 2 2 299 1 266 5.92e-146 418
Msa0033370 AT2G25760.2 40.357 280 152 4 10 274 107 386 6.19e-62 213
Msa0033370 AT2G25760.1 39.643 280 151 5 10 274 107 383 7.47e-59 205
Msa0033370 AT3G13670.1 35.640 289 167 6 6 278 131 416 3.61e-54 192
Msa0033370 AT3G03940.1 36.170 282 164 5 10 278 140 418 1.23e-53 191
Msa0033370 AT5G18190.2 36.170 282 164 5 10 278 130 408 2.03e-53 190
Msa0033370 AT5G18190.1 36.170 282 164 5 10 278 130 408 2.03e-53 190
Msa0033370 AT3G50530.1 25.751 233 138 7 6 220 144 359 1.24e-12 70.5
Msa0033370 AT3G06030.1 26.389 216 140 7 9 214 67 273 7.95e-12 67.8
Msa0033370 AT1G62400.1 26.761 284 174 11 12 282 88 350 1.02e-11 67.0
Msa0033370 AT1G30270.1 27.854 219 133 8 8 215 29 233 3.19e-11 65.9
Msa0033370 AT1G30270.2 27.854 219 133 8 8 215 29 233 4.31e-11 65.1

Find 170 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGGTTAAATTCTGAATTT+TGG 0.096564 1_1:+60830717 Msa0033370:five_prime_UTR
CTGGAGTAGAACAAAGTAAA+AGG 0.196975 1_1:+60830580 Msa0033370:five_prime_UTR
TTCAAACTTGGGAGGAAAAT+TGG 0.201290 1_1:+60830792 Msa0033370:CDS
CATGAAGAGTCTTTATCTTT+AGG 0.208657 1_1:+60836105 Msa0033370:three_prime_UTR
AGTAGCAGACCAAGCTCTTC+TGG 0.221963 1_1:+60835687 Msa0033370:CDS
GTCATTTGGAGAAATTTATT+TGG 0.224733 1_1:+60830821 Msa0033370:CDS
CTACAAAATCTCTACAATTT+CGG 0.245113 1_1:+60830437 Msa0033370:five_prime_UTR
TTGAAGAAGCATATACAATT+TGG 0.250533 1_1:-60832308 None:intergenic
GAGAAATATCAATTAGCTTT+TGG 0.252061 1_1:-60836010 None:intergenic
TATCACCCTTCCATTGCATT+TGG 0.277778 1_1:+60836236 Msa0033370:three_prime_UTR
TTTGTAGGAAAGAAGGAAAA+TGG 0.298975 1_1:-60830421 None:intergenic
GAGAGAGAAGAGTAAGGATT+TGG 0.299795 1_1:-60830495 None:intergenic
GTTATGATGGATCTTGTTAT+TGG 0.304007 1_1:+60830762 Msa0033370:exon
GTCATGGCCATTGACCTTCT+TGG 0.314864 1_1:+60832721 Msa0033370:CDS
ATCACCCTTCCATTGCATTT+GGG 0.329797 1_1:+60836237 Msa0033370:three_prime_UTR
AATCGAAGTAAGAACGAATC+TGG 0.333823 1_1:-60830619 None:intergenic
TTATATTGGGTTTGTTATGA+TGG 0.335108 1_1:+60830749 Msa0033370:exon
TCATTTGGAGAAATTTATTT+GGG 0.336755 1_1:+60830822 Msa0033370:CDS
AAGCATTGAAGTACCTCTAT+TGG 0.339689 1_1:-60834272 None:intergenic
GAAATTCGAGATAGATTATC+AGG 0.341801 1_1:+60835378 Msa0033370:CDS
AAAATTGGAAGTGGGTCATT+TGG 0.351862 1_1:+60830807 Msa0033370:CDS
TGTAGCAACCTGATTCTGAT+AGG 0.353677 1_1:+60835613 Msa0033370:intron
TCTCTTAAGATATGAATAAT+CGG 0.357282 1_1:-60834667 None:intergenic
ATATTGAAGTATCCACAAAT+TGG 0.362130 1_1:+60834842 Msa0033370:CDS
AGTTTGACTATGTATTTGAT+TGG 0.365329 1_1:+60834816 Msa0033370:CDS
ATATCTTAAGAGACTCTTCC+GGG 0.366043 1_1:+60834677 Msa0033370:CDS
AGAAACACTAACCACATCTT+TGG 0.368375 1_1:-60835478 None:intergenic
GTCTTAAACCCAGGACCATC+TGG 0.374408 1_1:+60834985 Msa0033370:CDS
GAGCGATTAGAACGGCCTTC+AGG 0.389926 1_1:+60835009 Msa0033370:CDS
CATATCTTAAGAGACTCTTC+CGG 0.390501 1_1:+60834676 Msa0033370:CDS
CTTCCATGATTATCTAAGCT+TGG 0.392129 1_1:+60836075 Msa0033370:three_prime_UTR
CCTGTGTTGTGGTCCATTCA+TGG 0.394126 1_1:+60835987 Msa0033370:three_prime_UTR
ACCGCAATGATCGGCAATAG+TGG 0.400015 1_1:-60834632 None:intergenic
GGGTGGCTCCTAATTTAGAT+TGG 0.401275 1_1:+60836274 Msa0033370:three_prime_UTR
GGTGGCTCCTAATTTAGATT+GGG 0.404634 1_1:+60836275 Msa0033370:three_prime_UTR
TTTAGGCCGCAAGGCAAATC+AGG 0.406238 1_1:+60832993 Msa0033370:CDS
TAGGAGCCACCCACTATTAG+AGG 0.407235 1_1:-60836263 None:intergenic
AATCGCTCTCCAGATGGTCC+TGG 0.408461 1_1:-60834994 None:intergenic
TAGAAGACAAATGGAACATA+TGG 0.417936 1_1:-60836495 None:intergenic
CTTTCATTCCTTGCCATGGA+AGG 0.419286 1_1:-60834196 None:intergenic
TCAATTGAGTAGAAGACAAA+TGG 0.419686 1_1:-60836504 None:intergenic
GTAATGGCAGTGCTTCAAAA+AGG 0.426296 1_1:+60835652 Msa0033370:CDS
AGCTTTGAGCTCCTGTCAAT+TGG 0.426702 1_1:+60835855 Msa0033370:CDS
TTTAAGACTGGTTTCACACT+TGG 0.427367 1_1:-60834970 None:intergenic
ATTTGGGACCCCTCTAATAG+TGG 0.431719 1_1:+60836253 Msa0033370:three_prime_UTR
AGAATGTTTGGAGCCTCCTT+AGG 0.434861 1_1:+60836331 Msa0033370:three_prime_UTR
TATCAGTGAACAAGAATGTT+TGG 0.436233 1_1:+60836319 Msa0033370:three_prime_UTR
GATAACCTTCTCGAATGAAT+AGG 0.436809 1_1:-60834701 None:intergenic
GGTACGGGTGAAGGATGATT+TGG 0.444496 1_1:-60835796 None:intergenic
GTAGCAGACCAAGCTCTTCT+GGG 0.445063 1_1:+60835688 Msa0033370:CDS
ACCTCGTGTCCCTGCGGTAC+GGG 0.452524 1_1:-60835811 None:intergenic
CTGCGAGCCCTATCAGAATC+AGG 0.454495 1_1:-60835621 None:intergenic
ACTAACCCGTGTTCTAGAAC+TGG 0.454676 1_1:-60834867 None:intergenic
TTAAATAAGTCTTCGAGACT+TGG 0.457011 1_1:-60832745 None:intergenic
GATGGTCCTGGGTTTAAGAC+TGG 0.457367 1_1:-60834982 None:intergenic
ATTGGTGGAAAATTCAAACT+TGG 0.459721 1_1:+60830780 Msa0033370:CDS
CTAGAACTGGATCCAATTTG+TGG 0.461995 1_1:-60834854 None:intergenic
TGAGGATGCTTTGTCTTCAC+AGG 0.464666 1_1:-60832271 None:intergenic
TTGACGGAGAGAGAAGAGTA+AGG 0.470852 1_1:-60830501 None:intergenic
TTCTGTATTAATGTTTAACT+AGG 0.471777 1_1:+60836443 Msa0033370:three_prime_UTR
ATACCTCATATAAAGTGGTC+TGG 0.472466 1_1:+60832679 Msa0033370:CDS
GAGCTCCTGTCAATTGGTAC+CGG 0.473754 1_1:+60835861 Msa0033370:CDS
GAACCAAGCTTAGATAATCA+TGG 0.474739 1_1:-60836078 None:intergenic
ATATATTGAGTAAAATGAAC+AGG 0.475550 1_1:-60835958 None:intergenic
TTTCATATTAGGTACCTGTA+TGG 0.476195 1_1:-60833432 None:intergenic
CTCTTAAGATATGAATAATC+GGG 0.477779 1_1:-60834666 None:intergenic
AAATTGTATATGCTTCTTCA+AGG 0.478491 1_1:+60832310 Msa0033370:CDS
AGCATCTGAAGAAGCATTTG+AGG 0.479553 1_1:-60836052 None:intergenic
TGGAGTAGAACAAAGTAAAA+GGG 0.480649 1_1:+60830581 Msa0033370:five_prime_UTR
TGTCCCTGCGGTACGGGTGA+AGG 0.481064 1_1:-60835805 None:intergenic
CACCTCGTGTCCCTGCGGTA+CGG 0.484291 1_1:-60835812 None:intergenic
CCAGCTTTCATTCCTTGCCA+TGG 0.488363 1_1:-60834200 None:intergenic
GAAAATGCTTACTCCAATAG+AGG 0.494552 1_1:+60834259 Msa0033370:CDS
TACTTCGATTCAACTAGTGA+TGG 0.500913 1_1:+60830632 Msa0033370:five_prime_UTR
CGACTAGACCGGCTTTCACT+AGG 0.501636 1_1:-60835714 None:intergenic
AGAGGAAGTGGCTGTTAAGC+TGG 0.503078 1_1:+60830951 Msa0033370:CDS
CTAGGTTCCCCAGAAGAGCT+TGG 0.503285 1_1:-60835696 None:intergenic
TCATCCTTCACCCGTACCGC+AGG 0.504700 1_1:+60835801 Msa0033370:CDS
AGTAGAGTATATGCACTCTC+GGG 0.504876 1_1:+60832927 Msa0033370:CDS
GGTCTGCTACTTGATATCAT+AGG 0.504963 1_1:-60835675 None:intergenic
CTTGCAAAGCATATTAGACT+TGG 0.506872 1_1:-60836210 None:intergenic
AGAAGGAAAATGGATGAGAA+TGG 0.508280 1_1:-60830411 None:intergenic
AGATAAAGACTCTTCATGAA+TGG 0.508742 1_1:-60836100 None:intergenic
TATAAAGTGGTCTGGAGTTG+AGG 0.509261 1_1:+60832687 Msa0033370:CDS
ATCGCTCTCCAGATGGTCCT+GGG 0.510903 1_1:-60834993 None:intergenic
TAAACCCATCAGAAAATTGT+CGG 0.511510 1_1:-60832974 None:intergenic
ACTCCAGACCACTTTATATG+AGG 0.512923 1_1:-60832682 None:intergenic
AAATATGATGTGAATTCTGT+TGG 0.516022 1_1:-60834609 None:intergenic
TATATTTCTATCCTGTGTTG+TGG 0.518820 1_1:+60835976 Msa0033370:three_prime_UTR
GAGTAGAGTATATGCACTCT+CGG 0.522104 1_1:+60832926 Msa0033370:CDS
CACATAAGCATATACCATAC+AGG 0.528806 1_1:+60833418 Msa0033370:CDS
TTGGTGGAAAATTCAAACTT+GGG 0.528933 1_1:+60830781 Msa0033370:CDS
GTAGCAACCTGATTCTGATA+GGG 0.529158 1_1:+60835614 Msa0033370:intron
TGGATCCAGTTCTAGAACAC+GGG 0.531689 1_1:+60834862 Msa0033370:CDS
GATGATTTGGATTCAAGACC+AGG 0.533754 1_1:-60835783 None:intergenic
ATAAAGTGGTCTGGAGTTGA+GGG 0.536659 1_1:+60832688 Msa0033370:CDS
CTGCGCAAGGACTGCAGCAT+AGG 0.536788 1_1:+60835433 Msa0033370:CDS
TGGAGTGTGTGTTTAACAAA+CGG 0.538160 1_1:-60836475 None:intergenic
CTGGAATACCTCATATAAAG+TGG 0.539142 1_1:+60832674 Msa0033370:CDS
CAGGTATACATTATTGACTA+CGG 0.539979 1_1:+60833366 Msa0033370:intron
AGGGAAAACAAGAATCTCAC+TGG 0.540312 1_1:+60833868 Msa0033370:intron
TGTGCAAACTCAAGAGGAAG+TGG 0.545993 1_1:+60830939 Msa0033370:CDS
TATCTTCAAACCGCAATGAT+CGG 0.546276 1_1:-60834641 None:intergenic
AAACCCATCAGAAAATTGTC+GGG 0.547167 1_1:-60832973 None:intergenic
GATAGATTATCAGGTGCAGT+GGG 0.549752 1_1:+60835387 Msa0033370:CDS
ATGATGGATCTTGTTATTGG+TGG 0.549805 1_1:+60830765 Msa0033370:CDS
ACTTCGATTCAACTAGTGAT+GGG 0.554162 1_1:+60830633 Msa0033370:five_prime_UTR
ACTTGGTCCAAGAAGGTCAA+TGG 0.555497 1_1:-60832728 None:intergenic
GCATCTGAAGAAGCATTTGA+GGG 0.557442 1_1:-60836051 None:intergenic
CGGGACCTATTCATTCGAGA+AGG 0.558168 1_1:+60834696 Msa0033370:CDS
GCTCGCAGTTCTACTCGTAA+TGG 0.559763 1_1:+60835636 Msa0033370:CDS
TTGGACTCGTAGAGAAGTTG+AGG 0.560210 1_1:-60832289 None:intergenic
AGCTCCTGTCAATTGGTACC+GGG 0.562482 1_1:+60835862 Msa0033370:CDS
CTTCGAGACTTGGTCCAAGA+AGG 0.563259 1_1:-60832735 None:intergenic
CTTGGGAGGAAAATTGGAAG+TGG 0.565797 1_1:+60830798 Msa0033370:CDS
CCATGGCAAGGAATGAAAGC+TGG 0.566338 1_1:+60834200 Msa0033370:CDS
TTTGGGACCCCTCTAATAGT+GGG 0.567908 1_1:+60836254 Msa0033370:three_prime_UTR
CGTTCTAATCGCTCTCCAGA+TGG 0.568142 1_1:-60835000 None:intergenic
ATCGAAGTAAGAACGAATCT+GGG 0.569725 1_1:-60830618 None:intergenic
GTTAACACTCACCTTGGAGT+TGG 0.571211 1_1:+60833910 Msa0033370:CDS
GGGGTCCCAAATGCAATGGA+AGG 0.572247 1_1:-60836242 None:intergenic
AGAAGGAATGGGTCTGCGCA+AGG 0.575048 1_1:+60835420 Msa0033370:CDS
TAGATTATCAGGTGCAGTGG+GGG 0.578783 1_1:+60835389 Msa0033370:CDS
GGATCTGTGCGTGGAGGTGA+AGG 0.579945 1_1:-60830474 None:intergenic
CTGGGGAACCTAGTGAAAGC+CGG 0.580386 1_1:+60835706 Msa0033370:CDS
TAGATACCTGATTTGCCTTG+CGG 0.583445 1_1:-60832999 None:intergenic
TCGAGATCAATCGACTAGAC+CGG 0.585197 1_1:-60835725 None:intergenic
AGTAAAATGAACAGGTGTGA+AGG 0.585370 1_1:-60835950 None:intergenic
GCAAGTGTTAACACTCACCT+TGG 0.587854 1_1:+60833904 Msa0033370:CDS
GTGAAACCAGTCTTAAACCC+AGG 0.592219 1_1:+60834976 Msa0033370:CDS
TGTTAATGTGCAAACTCAAG+AGG 0.593524 1_1:+60830933 Msa0033370:CDS
TAGAGGGGTCCCAAATGCAA+TGG 0.594829 1_1:-60836246 None:intergenic
AGGAGCCACCCACTATTAGA+GGG 0.595602 1_1:-60836262 None:intergenic
TGCCTCACTCACCAACTCCA+AGG 0.596982 1_1:-60833921 None:intergenic
AGATAGATTATCAGGTGCAG+TGG 0.597787 1_1:+60835386 Msa0033370:CDS
GTGGAAAATTCAAACTTGGG+AGG 0.601354 1_1:+60830784 Msa0033370:CDS
CTTCTCGAATGAATAGGTCC+CGG 0.601529 1_1:-60834695 None:intergenic
CCATGAATGGACCACAACAC+AGG 0.608663 1_1:-60835987 None:intergenic
GTGGCTCCTAATTTAGATTG+GGG 0.609750 1_1:+60836276 Msa0033370:three_prime_UTR
TCCACTATTGCCGATCATTG+CGG 0.612017 1_1:+60834631 Msa0033370:CDS
TGGGTGAGAAGCGATATTGA+CGG 0.613702 1_1:-60830517 None:intergenic
AATGGAAGTGTGAATGATTG+TGG 0.614836 1_1:-60830393 None:intergenic
GGGACCCCTCTAATAGTGGG+TGG 0.614908 1_1:+60836257 Msa0033370:three_prime_UTR
AAATGAACAGGTGTGAAGGG+TGG 0.615017 1_1:-60835946 None:intergenic
ACCCGTACCGCAGGGACACG+AGG 0.619215 1_1:+60835810 Msa0033370:CDS
TGAGGGCGAGTACAATGTCA+TGG 0.623455 1_1:+60832705 Msa0033370:CDS
TCTGATGGGTTTAGGCCGCA+AGG 0.624373 1_1:+60832984 Msa0033370:CDS
GGGTCCCAAATGCAATGGAA+GGG 0.636237 1_1:-60836241 None:intergenic
CTAACCACATCTTTGGAAGA+CGG 0.637061 1_1:-60835471 None:intergenic
AGAGATGATCTAGAATCACT+TGG 0.637396 1_1:+60834063 Msa0033370:CDS
ACTACTCAGAGGGTTCAACC+TGG 0.637692 1_1:+60835765 Msa0033370:CDS
TTGGATCCAGTTCTAGAACA+CGG 0.640938 1_1:+60834861 Msa0033370:CDS
TTGGGAGGAAAATTGGAAGT+GGG 0.646604 1_1:+60830799 Msa0033370:CDS
TAGCAGACCAAGCTCTTCTG+GGG 0.648246 1_1:+60835689 Msa0033370:CDS
CATCCTTCACCCGTACCGCA+GGG 0.651920 1_1:+60835802 Msa0033370:CDS
TTGTATATGCTTCTTCAAGG+AGG 0.656173 1_1:+60832313 Msa0033370:CDS
TAAGGATTTGGATCTGTGCG+TGG 0.660017 1_1:-60830483 None:intergenic
GTAAAATGAACAGGTGTGAA+GGG 0.660908 1_1:-60835949 None:intergenic
GTCGTCTATCGACTACTCAG+AGG 0.661119 1_1:+60835754 Msa0033370:CDS
TCGTCTATCGACTACTCAGA+GGG 0.669134 1_1:+60835755 Msa0033370:CDS
TATGCCGTCTTCCAAAGATG+TGG 0.681158 1_1:+60835467 Msa0033370:CDS
GGAAGTGTGAATGATTGTGG+TGG 0.685924 1_1:-60830390 None:intergenic
GTAGAGTATATGCACTCTCG+GGG 0.691454 1_1:+60832928 Msa0033370:CDS
AAATAAGCGAAAACTGTCGA+CGG 0.692156 1_1:+60835891 Msa0033370:exon
CATCTGGAGAGCGATTAGAA+CGG 0.692759 1_1:+60835001 Msa0033370:CDS
GGATTTGGATCTGTGCGTGG+AGG 0.715402 1_1:-60830480 None:intergenic
GGAGCCACCCACTATTAGAG+GGG 0.722209 1_1:-60836261 None:intergenic
GCGACCACCTCGTGTCCCTG+CGG 0.725612 1_1:-60835817 None:intergenic
ATAGATTATCAGGTGCAGTG+GGG 0.730659 1_1:+60835388 Msa0033370:CDS
CGTACCGCAGGGACACGAGG+TGG 0.738349 1_1:+60835813 Msa0033370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTATAAATTAATTTTC+TGG + chr1_1:60830561-60830580 Msa0033370:five_prime_UTR 10.0%
!! TTAGTTATATTTGAATAATT+TGG + chr1_1:60830894-60830913 Msa0033370:intron 10.0%
!!! GAAGTTTATTTTAAAAAAAA+AGG - chr1_1:60831416-60831435 None:intergenic 10.0%
!! TATTTAAATTAGAACTTTAA+TGG - chr1_1:60833992-60834011 None:intergenic 10.0%
!!! AAGTTCTAATTTAAATAAAT+TGG + chr1_1:60833995-60834014 Msa0033370:intron 10.0%
!!! AGTTCTAATTTAAATAAATT+GGG + chr1_1:60833996-60834015 Msa0033370:intron 10.0%
!!! AATCCAATTTTTATAAAAAC+AGG - chr1_1:60830685-60830704 None:intergenic 15.0%
!! TGTAATAATTACAAGAAAAT+CGG - chr1_1:60833348-60833367 None:intergenic 15.0%
!! TAAAAAACATGTAAACTTAA+AGG - chr1_1:60833532-60833551 None:intergenic 15.0%
!!! CATCCTGTTTTTATAAAAAT+TGG + chr1_1:60830679-60830698 Msa0033370:five_prime_UTR 20.0%
!! TCATTTGGAGAAATTTATTT+GGG + chr1_1:60830822-60830841 Msa0033370:CDS 20.0%
!! AAAACTATAAAACACAATTC+AGG - chr1_1:60831122-60831141 None:intergenic 20.0%
!!! TTAGTTGTTATTTTTGTTAG+TGG + chr1_1:60831198-60831217 Msa0033370:intron 20.0%
!!! TAGTTGTTATTTTTGTTAGT+GGG + chr1_1:60831199-60831218 Msa0033370:intron 20.0%
!!! ATTTTCAATATTCTGATCAT+TGG + chr1_1:60831553-60831572 Msa0033370:intron 20.0%
!! TGTACTTATGTACTTATTTA+TGG + chr1_1:60831587-60831606 Msa0033370:intron 20.0%
!! AAGATTTGTATACTTCTATT+AGG + chr1_1:60831749-60831768 Msa0033370:intron 20.0%
!! ATTCATATATAAATTCTGTG+TGG - chr1_1:60831794-60831813 None:intergenic 20.0%
!! TTATTGAATAAATAGGGAAA+TGG - chr1_1:60832017-60832036 None:intergenic 20.0%
!! AAGCAGTTATTGAATAAATA+GGG - chr1_1:60832023-60832042 None:intergenic 20.0%
!! TAAGCAGTTATTGAATAAAT+AGG - chr1_1:60832024-60832043 None:intergenic 20.0%
!!! ACTTTAAAATATGCAAGTTT+TGG + chr1_1:60832137-60832156 Msa0033370:intron 20.0%
!! AAATTGAACCGATATAAATT+AGG - chr1_1:60832361-60832380 None:intergenic 20.0%
!! TTAGCATGATGTTAAAAATA+TGG - chr1_1:60832853-60832872 None:intergenic 20.0%
!!! TTCTGCATTTATTGTTATTT+AGG + chr1_1:60833033-60833052 Msa0033370:intron 20.0%
!!! GATTTTCTTGTAATTATTAC+AGG + chr1_1:60833347-60833366 Msa0033370:intron 20.0%
!! CAAAATTAAGAAATCCAAAA+GGG - chr1_1:60833582-60833601 None:intergenic 20.0%
!! TCAAAATTAAGAAATCCAAA+AGG - chr1_1:60833583-60833602 None:intergenic 20.0%
!! AATGTAAAGAGATGAAAAAT+TGG - chr1_1:60833649-60833668 None:intergenic 20.0%
!! ATAATAATACTTGTGAAATG+CGG - chr1_1:60834378-60834397 None:intergenic 20.0%
!! AAATTGTGAAAGATGAAAAT+TGG - chr1_1:60834538-60834557 None:intergenic 20.0%
!! TCTCTTAAGATATGAATAAT+CGG - chr1_1:60834670-60834689 None:intergenic 20.0%
!!! TAAATAGTTTTGATTTCTGA+TGG + chr1_1:60835101-60835120 Msa0033370:intron 20.0%
!! AACCACTTGTTTAAATAATA+TGG + chr1_1:60835171-60835190 Msa0033370:intron 20.0%
!! ATCCATATTATTTAAACAAG+TGG - chr1_1:60835176-60835195 None:intergenic 20.0%
!!! TTGTCTTTTGTTTTGTTTTT+TGG + chr1_1:60835526-60835545 Msa0033370:intron 20.0%
!! ATATATTGAGTAAAATGAAC+AGG - chr1_1:60835961-60835980 None:intergenic 20.0%
!! TTCTGTATTAATGTTTAACT+AGG + chr1_1:60836443-60836462 Msa0033370:three_prime_UTR 20.0%
! CTACAAAATCTCTACAATTT+CGG + chr1_1:60830437-60830456 Msa0033370:five_prime_UTR 25.0%
!!! TGGATTTTTACTTTTTACAG+TGG + chr1_1:60830699-60830718 Msa0033370:five_prime_UTR 25.0%
!! AGTGGTTAAATTCTGAATTT+TGG + chr1_1:60830717-60830736 Msa0033370:five_prime_UTR 25.0%
!! GTGGTTAAATTCTGAATTTT+GGG + chr1_1:60830718-60830737 Msa0033370:five_prime_UTR 25.0%
!! TGGTTAAATTCTGAATTTTG+GGG + chr1_1:60830719-60830738 Msa0033370:five_prime_UTR 25.0%
!!! TTTGGGGTGTTTTTTTATAT+TGG + chr1_1:60830735-60830754 Msa0033370:five_prime_UTR 25.0%
!!! TTGGGGTGTTTTTTTATATT+GGG + chr1_1:60830736-60830755 Msa0033370:five_prime_UTR 25.0%
!!! TTATATTGGGTTTGTTATGA+TGG + chr1_1:60830749-60830768 Msa0033370:exon 25.0%
! GTCATTTGGAGAAATTTATT+TGG + chr1_1:60830821-60830840 Msa0033370:CDS 25.0%
!! AATTTGGATTTGTTTGTTTC+AGG + chr1_1:60830910-60830929 Msa0033370:intron 25.0%
!!! AGTTGTTATTTTTGTTAGTG+GGG + chr1_1:60831200-60831219 Msa0033370:intron 25.0%
! ATCTTGACAGAAATAGAATA+AGG + chr1_1:60831897-60831916 Msa0033370:intron 25.0%
!! TTGAAGAAGCATATACAATT+TGG - chr1_1:60832311-60832330 None:intergenic 25.0%
! AAATTGTATATGCTTCTTCA+AGG + chr1_1:60832310-60832329 Msa0033370:CDS 25.0%
! TTTGCCTTCCTAATTTATAT+CGG + chr1_1:60832350-60832369 Msa0033370:intron 25.0%
!!! TATATCGGTTCAATTTCTTT+TGG + chr1_1:60832365-60832384 Msa0033370:intron 25.0%
!! AAACAAATCACTATTTTCTG+CGG + chr1_1:60832545-60832564 Msa0033370:intron 25.0%
!!! CGTTAATTTGTATTTTAAGC+TGG + chr1_1:60832655-60832674 Msa0033370:intron 25.0%
! TTTATTCCTGTAATTGACAT+CGG - chr1_1:60833167-60833186 None:intergenic 25.0%
!! TTTTACCGAAAAACAAGAAA+TGG + chr1_1:60833212-60833231 Msa0033370:intron 25.0%
!!! TACTTCCATTTCTTGTTTTT+CGG - chr1_1:60833220-60833239 None:intergenic 25.0%
! ATGGAAGTAGAAAATAGAAA+TGG + chr1_1:60833231-60833250 Msa0033370:intron 25.0%
! AATAGAAATGGAAACCAAAT+AGG + chr1_1:60833243-60833262 Msa0033370:intron 25.0%
! AAAAGAAATAAAGGCCTATT+TGG - chr1_1:60833260-60833279 None:intergenic 25.0%
!!! AAATAGGCCTTTATTTCTTT+TGG + chr1_1:60833259-60833278 Msa0033370:intron 25.0%
!!! CACAATAAATTTTAGTGAAC+GGG - chr1_1:60833299-60833318 None:intergenic 25.0%
!!! GCACAATAAATTTTAGTGAA+CGG - chr1_1:60833300-60833319 None:intergenic 25.0%
! TACCTAATATGAAATTTGGT+TGG + chr1_1:60833441-60833460 Msa0033370:intron 25.0%
! ACCTAATATGAAATTTGGTT+GGG + chr1_1:60833442-60833461 Msa0033370:intron 25.0%
! CAAAAGGGAAAAAAATACAA+AGG - chr1_1:60833567-60833586 None:intergenic 25.0%
!!! CTTTGTATTTTTTTCCCTTT+TGG + chr1_1:60833565-60833584 Msa0033370:intron 25.0%
! AATTGGATATGAAATATCAC+AGG - chr1_1:60833632-60833651 None:intergenic 25.0%
!!! TATATCGACTTTTTCTAACT+TGG + chr1_1:60833730-60833749 Msa0033370:intron 25.0%
!!! TGCACTATTTTTCTTTCAAT+AGG + chr1_1:60833848-60833867 Msa0033370:intron 25.0%
!!! GCACTATTTTTCTTTCAATA+GGG + chr1_1:60833849-60833868 Msa0033370:intron 25.0%
! TTTGGATAATTGGTTATGTT+AGG + chr1_1:60834324-60834343 Msa0033370:intron 25.0%
! TTTGCAAAGAATTTACAGTT+TGG + chr1_1:60834555-60834574 Msa0033370:intron 25.0%
! AAATATGATGTGAATTCTGT+TGG - chr1_1:60834612-60834631 None:intergenic 25.0%
! CTCTTAAGATATGAATAATC+GGG - chr1_1:60834669-60834688 None:intergenic 25.0%
!! TTTAGGATAACTTTCAACTA+AGG - chr1_1:60834752-60834771 None:intergenic 25.0%
!!! AAAATGCACAATTTCTAGTA+AGG - chr1_1:60834787-60834806 None:intergenic 25.0%
!! ACTAGAAATTGTGCATTTTT+AGG + chr1_1:60834788-60834807 Msa0033370:intron 25.0%
! AGTTTGACTATGTATTTGAT+TGG + chr1_1:60834816-60834835 Msa0033370:CDS 25.0%
!! ATATTGAAGTATCCACAAAT+TGG + chr1_1:60834842-60834861 Msa0033370:CDS 25.0%
! AGATGAAGATGAAAACTAAT+AGG - chr1_1:60834896-60834915 None:intergenic 25.0%
!!! TCATCTTCATCTTTAAGTTT+TGG + chr1_1:60834904-60834923 Msa0033370:intron 25.0%
!!! CTAATCCCTTTTATTTTAGT+CGG + chr1_1:60835275-60835294 Msa0033370:intron 25.0%
!!! CTAATCCCTTTTATTTTAGT+CGG + chr1_1:60835275-60835294 Msa0033370:intron 25.0%
!! CACATGATTTTCTTTTTGTA+TGG + chr1_1:60835502-60835521 Msa0033370:intron 25.0%
!!! GAGAAATATCAATTAGCTTT+TGG - chr1_1:60836013-60836032 None:intergenic 25.0%
!!! ATTCTCTACAATTTTTCAGT+TGG + chr1_1:60836169-60836188 Msa0033370:three_prime_UTR 25.0%
!!! AATTTTTCAGTTGGACAAAA+GGG + chr1_1:60836178-60836197 Msa0033370:three_prime_UTR 25.0%
TTTGTAGGAAAGAAGGAAAA+TGG - chr1_1:60830424-60830443 None:intergenic 30.0%
! TAGAGATTTTGTAGGAAAGA+AGG - chr1_1:60830431-60830450 None:intergenic 30.0%
! CGAAATTGTAGAGATTTTGT+AGG - chr1_1:60830439-60830458 None:intergenic 30.0%
TGGAGTAGAACAAAGTAAAA+GGG + chr1_1:60830581-60830600 Msa0033370:five_prime_UTR 30.0%
!! GTTATGATGGATCTTGTTAT+TGG + chr1_1:60830762-60830781 Msa0033370:exon 30.0%
ATTGGTGGAAAATTCAAACT+TGG + chr1_1:60830780-60830799 Msa0033370:CDS 30.0%
TTGGTGGAAAATTCAAACTT+GGG + chr1_1:60830781-60830800 Msa0033370:CDS 30.0%
CTAGGTAGTTGACATTTAAA+TGG + chr1_1:60831169-60831188 Msa0033370:intron 30.0%
AAATAGTGATCGGAGTAATA+AGG - chr1_1:60831247-60831266 None:intergenic 30.0%
CATCATCGTTAAATAGTGAT+CGG - chr1_1:60831257-60831276 None:intergenic 30.0%
ATAGGTATATTGTCCAATTG+CGG - chr1_1:60831323-60831342 None:intergenic 30.0%
AAAATGCAGGTAATGTGTAT+GGG - chr1_1:60831538-60831557 None:intergenic 30.0%
GATCAGAATATTGAAAATGC+AGG - chr1_1:60831551-60831570 None:intergenic 30.0%
TAACATTTACAGAACTGAAG+GGG - chr1_1:60831672-60831691 None:intergenic 30.0%
GTAACATTTACAGAACTGAA+GGG - chr1_1:60831673-60831692 None:intergenic 30.0%
AGTAACATTTACAGAACTGA+AGG - chr1_1:60831674-60831693 None:intergenic 30.0%
TAAGATATGAACTAAGTCGT+TGG + chr1_1:60831694-60831713 Msa0033370:intron 30.0%
GTATACAAATCTTGAAGCAA+GGG - chr1_1:60831742-60831761 None:intergenic 30.0%
AGTATACAAATCTTGAAGCA+AGG - chr1_1:60831743-60831762 None:intergenic 30.0%
AAGAATGATTCTCAAAACAG+AGG + chr1_1:60831844-60831863 Msa0033370:intron 30.0%
GCTTTATGATGGTTATTTGT+TGG + chr1_1:60832166-60832185 Msa0033370:intron 30.0%
! ACTTTTCTCTACGTTTTCAT+TGG + chr1_1:60832237-60832256 Msa0033370:intron 30.0%
TGAACCGATATAAATTAGGA+AGG - chr1_1:60832357-60832376 None:intergenic 30.0%
TTAAATAAGTCTTCGAGACT+TGG - chr1_1:60832748-60832767 None:intergenic 30.0%
AAAGTGGTAATTCACATTGA+AGG - chr1_1:60832893-60832912 None:intergenic 30.0%
ATACTCTACTCTGTTTATCT+AGG - chr1_1:60832917-60832936 None:intergenic 30.0%
TAAACCCATCAGAAAATTGT+CGG - chr1_1:60832977-60832996 None:intergenic 30.0%
TATGTCATGCTTAAATTCTC+TGG - chr1_1:60833069-60833088 None:intergenic 30.0%
! TTTTAGTGAACGGGATTATA+TGG - chr1_1:60833290-60833309 None:intergenic 30.0%
AAAATCGGAAAACTTGACAT+AGG - chr1_1:60833333-60833352 None:intergenic 30.0%
! CAGGTATACATTATTGACTA+CGG + chr1_1:60833366-60833385 Msa0033370:intron 30.0%
TTTCATATTAGGTACCTGTA+TGG - chr1_1:60833435-60833454 None:intergenic 30.0%
CAGGTACCTAATATGAAATT+TGG + chr1_1:60833437-60833456 Msa0033370:intron 30.0%
TCCCAACCAAATTTCATATT+AGG - chr1_1:60833446-60833465 None:intergenic 30.0%
CAATATACTCAAGGAATCAA+AGG - chr1_1:60833484-60833503 None:intergenic 30.0%
ATCTGTTATTGCACATTCAT+TGG - chr1_1:60833711-60833730 None:intergenic 30.0%
CATCATTGTACTTTCTAACT+TGG + chr1_1:60834153-60834172 Msa0033370:intron 30.0%
TAATTGGTTATGTTAGGATG+AGG + chr1_1:60834330-60834349 Msa0033370:intron 30.0%
! TAAGGTACTTTCAAAGCTTT+AGG - chr1_1:60834769-60834788 None:intergenic 30.0%
TAGATTTCAGAACTTGCAAT+AGG - chr1_1:60835041-60835060 None:intergenic 30.0%
GTTTATATGATACACTGCAA+AGG + chr1_1:60835196-60835215 Msa0033370:intron 30.0%
AATGAAAAGACTCTGATCAT+TGG + chr1_1:60835245-60835264 Msa0033370:intron 30.0%
CGACTAAAATAAAAGGGATT+AGG - chr1_1:60835277-60835296 None:intergenic 30.0%
CTTGTCCGACTAAAATAAAA+GGG - chr1_1:60835283-60835302 None:intergenic 30.0%
TCTTGTCCGACTAAAATAAA+AGG - chr1_1:60835284-60835303 None:intergenic 30.0%
AATGAAAAGACTCTGATCAT+TGG + chr1_1:60835245-60835264 Msa0033370:intron 30.0%
CGACTAAAATAAAAGGGATT+AGG - chr1_1:60835277-60835296 None:intergenic 30.0%
CTTGTCCGACTAAAATAAAA+GGG - chr1_1:60835283-60835302 None:intergenic 30.0%
TCTTGTCCGACTAAAATAAA+AGG - chr1_1:60835284-60835303 None:intergenic 30.0%
!! TTTCGCTTATTTTCTTTTCC+CGG - chr1_1:60835883-60835902 None:intergenic 30.0%
! TATATTTCTATCCTGTGTTG+TGG + chr1_1:60835976-60835995 Msa0033370:three_prime_UTR 30.0%
AGATAAAGACTCTTCATGAA+TGG - chr1_1:60836103-60836122 None:intergenic 30.0%
CATGAAGAGTCTTTATCTTT+AGG + chr1_1:60836105-60836124 Msa0033370:three_prime_UTR 30.0%
!! CAATTTTTCAGTTGGACAAA+AGG + chr1_1:60836177-60836196 Msa0033370:three_prime_UTR 30.0%
! GTTTTACCCCAATCTAAATT+AGG - chr1_1:60836285-60836304 None:intergenic 30.0%
TATCAGTGAACAAGAATGTT+TGG + chr1_1:60836319-60836338 Msa0033370:three_prime_UTR 30.0%
AAAAACTTCAAAACCTAAGG+AGG - chr1_1:60836347-60836366 None:intergenic 30.0%
AGCAAAAACTTCAAAACCTA+AGG - chr1_1:60836350-60836369 None:intergenic 30.0%
!!! TTAGGTTTTGAAGTTTTTGC+TGG + chr1_1:60836349-60836368 Msa0033370:three_prime_UTR 30.0%
TAGAAGACAAATGGAACATA+TGG - chr1_1:60836498-60836517 None:intergenic 30.0%
! AATGGAAGTGTGAATGATTG+TGG - chr1_1:60830396-60830415 None:intergenic 35.0%
AGAAGGAAAATGGATGAGAA+TGG - chr1_1:60830414-60830433 None:intergenic 35.0%
CTGGAGTAGAACAAAGTAAA+AGG + chr1_1:60830580-60830599 Msa0033370:five_prime_UTR 35.0%
ATCGAAGTAAGAACGAATCT+GGG - chr1_1:60830621-60830640 None:intergenic 35.0%
AATCGAAGTAAGAACGAATC+TGG - chr1_1:60830622-60830641 None:intergenic 35.0%
TACTTCGATTCAACTAGTGA+TGG + chr1_1:60830632-60830651 Msa0033370:five_prime_UTR 35.0%
ACTTCGATTCAACTAGTGAT+GGG + chr1_1:60830633-60830652 Msa0033370:five_prime_UTR 35.0%
!! ATGATGGATCTTGTTATTGG+TGG + chr1_1:60830765-60830784 Msa0033370:CDS 35.0%
TTCAAACTTGGGAGGAAAAT+TGG + chr1_1:60830792-60830811 Msa0033370:CDS 35.0%
AAAATTGGAAGTGGGTCATT+TGG + chr1_1:60830807-60830826 Msa0033370:CDS 35.0%
TGTTAATGTGCAAACTCAAG+AGG + chr1_1:60830933-60830952 Msa0033370:CDS 35.0%
!! AGTTTTGACCTGAATTGTGT+TGG + chr1_1:60831136-60831155 Msa0033370:intron 35.0%
GAGTAATAAGGAGATCATGA+TGG - chr1_1:60831235-60831254 None:intergenic 35.0%
ATGATGAGTAGAGTTTGGTA+GGG + chr1_1:60831274-60831293 Msa0033370:intron 35.0%
TAGGTATATTGTCCAATTGC+GGG - chr1_1:60831322-60831341 None:intergenic 35.0%
AATGTAATCACATGTGACAC+TGG - chr1_1:60831384-60831403 None:intergenic 35.0%
CTGTGTCAATGCTTCATTAT+CGG + chr1_1:60831455-60831474 Msa0033370:intron 35.0%
GAAAATGCAGGTAATGTGTA+TGG - chr1_1:60831539-60831558 None:intergenic 35.0%
CATAATTAAGCAGACTCATG+TGG - chr1_1:60831645-60831664 None:intergenic 35.0%
ATTAGGCATGTGATTGAAAC+TGG + chr1_1:60831766-60831785 Msa0033370:intron 35.0%
AATCCAAAATAAGTACCCAC+TGG + chr1_1:60831982-60832001 Msa0033370:intron 35.0%
AAATGGAATGAAAAGCCAGT+GGG - chr1_1:60832000-60832019 None:intergenic 35.0%
AATGACACTGTCTCAAAGTT+GGG + chr1_1:60832112-60832131 Msa0033370:intron 35.0%
!! TTTGGCTTTGTGCTTTATGA+TGG + chr1_1:60832155-60832174 Msa0033370:intron 35.0%
GCACTTCGAGAAAAAAACTT+AGG - chr1_1:60832195-60832214 None:intergenic 35.0%
TTGTATATGCTTCTTCAAGG+AGG + chr1_1:60832313-60832332 Msa0033370:CDS 35.0%
!! CCAAAAGCGTTGTTAAATAG+CGG + chr1_1:60832393-60832412 Msa0033370:intron 35.0%
GTTGTCAAACAGTGCTATAA+CGG + chr1_1:60832493-60832512 Msa0033370:intron 35.0%
ATGTAAACAGATGCAAATCC+TGG - chr1_1:60832594-60832613 None:intergenic 35.0%
CTGGAATACCTCATATAAAG+TGG + chr1_1:60832674-60832693 Msa0033370:CDS 35.0%
ATACCTCATATAAAGTGGTC+TGG + chr1_1:60832679-60832698 Msa0033370:CDS 35.0%
CTCTGTTTATCTAGGTAAAG+TGG - chr1_1:60832909-60832928 None:intergenic 35.0%
AAACCCATCAGAAAATTGTC+GGG - chr1_1:60832976-60832995 None:intergenic 35.0%
!!! GACAATTTTCTGATGGGTTT+AGG + chr1_1:60832976-60832995 Msa0033370:CDS 35.0%
CTATTTCCGATGTCAATTAC+AGG + chr1_1:60833158-60833177 Msa0033370:intron 35.0%
!!! GATCACGATACTTTTTTGCA+AGG - chr1_1:60833392-60833411 None:intergenic 35.0%
CACATAAGCATATACCATAC+AGG + chr1_1:60833418-60833437 Msa0033370:CDS 35.0%
AGACAAGGACAATATACTCA+AGG - chr1_1:60833493-60833512 None:intergenic 35.0%
AACTGTAGAAAGATGAGACA+AGG - chr1_1:60833508-60833527 None:intergenic 35.0%
GCACAAAACTCAATGAAAAC+TGG - chr1_1:60833689-60833708 None:intergenic 35.0%
! AGAGATGATCTAGAATCACT+TGG + chr1_1:60834063-60834082 Msa0033370:CDS 35.0%
!! GTACTCATGTACTTTTTGAG+AGG + chr1_1:60834090-60834109 Msa0033370:CDS 35.0%
!! TCATGTACTTTTTGAGAGGA+AGG + chr1_1:60834094-60834113 Msa0033370:CDS 35.0%
!! TTTTTGAGAGGAAGGTTAGT+TGG + chr1_1:60834102-60834121 Msa0033370:intron 35.0%
GAAAATGCTTACTCCAATAG+AGG + chr1_1:60834259-60834278 Msa0033370:CDS 35.0%
!! AAGCATTGAAGTACCTCTAT+TGG - chr1_1:60834275-60834294 None:intergenic 35.0%
AATACTCTACTTCGATGCTT+TGG + chr1_1:60834306-60834325 Msa0033370:intron 35.0%
! ACTTCGATGCTTTGGATAAT+TGG + chr1_1:60834314-60834333 Msa0033370:intron 35.0%
TGCATGATGCAGAAACATAA+TGG - chr1_1:60834436-60834455 None:intergenic 35.0%
ACAGTTTGGATTTCTGTAAC+AGG + chr1_1:60834569-60834588 Msa0033370:intron 35.0%
TATCTTCAAACCGCAATGAT+CGG - chr1_1:60834644-60834663 None:intergenic 35.0%
CATATCTTAAGAGACTCTTC+CGG + chr1_1:60834676-60834695 Msa0033370:CDS 35.0%
ATATCTTAAGAGACTCTTCC+GGG + chr1_1:60834677-60834696 Msa0033370:CDS 35.0%
GATAACCTTCTCGAATGAAT+AGG - chr1_1:60834704-60834723 None:intergenic 35.0%
!! TTTAAGACTGGTTTCACACT+TGG - chr1_1:60834973-60834992 None:intergenic 35.0%
TGCAATAGGAATAAACCTGA+AGG - chr1_1:60835027-60835046 None:intergenic 35.0%
AGAAACACTAACCACATCTT+TGG - chr1_1:60835481-60835500 None:intergenic 35.0%
! AATTTCTTGTTGTCCAACAC+TGG + chr1_1:60835585-60835604 Msa0033370:intron 35.0%
AAATAAGCGAAAACTGTCGA+CGG + chr1_1:60835891-60835910 Msa0033370:exon 35.0%
GGTGGATGTCTCAAAAAAAA+AGG - chr1_1:60835931-60835950 None:intergenic 35.0%
GTAAAATGAACAGGTGTGAA+GGG - chr1_1:60835952-60835971 None:intergenic 35.0%
AGTAAAATGAACAGGTGTGA+AGG - chr1_1:60835953-60835972 None:intergenic 35.0%
!!! AATTAGCTTTTGGCCATGAA+TGG - chr1_1:60836003-60836022 None:intergenic 35.0%
CTTCCATGATTATCTAAGCT+TGG + chr1_1:60836075-60836094 Msa0033370:three_prime_UTR 35.0%
GAACCAAGCTTAGATAATCA+TGG - chr1_1:60836081-60836100 None:intergenic 35.0%
CTTGCAAAGCATATTAGACT+TGG - chr1_1:60836213-60836232 None:intergenic 35.0%
TGGAGTGTGTGTTTAACAAA+CGG - chr1_1:60836478-60836497 None:intergenic 35.0%
GAGAGAGAAGAGTAAGGATT+TGG - chr1_1:60830498-60830517 None:intergenic 40.0%
GTGGAAAATTCAAACTTGGG+AGG + chr1_1:60830784-60830803 Msa0033370:CDS 40.0%
TTGGGAGGAAAATTGGAAGT+GGG + chr1_1:60830799-60830818 Msa0033370:CDS 40.0%
AGCAATCACCAACACAATTC+AGG - chr1_1:60831147-60831166 None:intergenic 40.0%
!! TGTGTTGGTGATTGCTTACT+AGG + chr1_1:60831151-60831170 Msa0033370:intron 40.0%
! CGATGATGATGAGTAGAGTT+TGG + chr1_1:60831269-60831288 Msa0033370:intron 40.0%
GATGATGAGTAGAGTTTGGT+AGG + chr1_1:60831273-60831292 Msa0033370:intron 40.0%
! GCACAGACACTTTTGATCAA+AGG + chr1_1:60831353-60831372 Msa0033370:intron 40.0%
CAATGCTTCATTATCGGCAT+TGG + chr1_1:60831461-60831480 Msa0033370:intron 40.0%
GTCATGCATATAGACACAAG+GGG - chr1_1:60831623-60831642 None:intergenic 40.0%
GGTCATGCATATAGACACAA+GGG - chr1_1:60831624-60831643 None:intergenic 40.0%
TGGTCATGCATATAGACACA+AGG - chr1_1:60831625-60831644 None:intergenic 40.0%
AAGCTCTTGAACATCTTGGT+GGG - chr1_1:60831941-60831960 None:intergenic 40.0%
! AAGCCAGTGGGTACTTATTT+TGG - chr1_1:60831988-60832007 None:intergenic 40.0%
GAAATGGAATGAAAAGCCAG+TGG - chr1_1:60832001-60832020 None:intergenic 40.0%
!! CAACTTTGAGACAGTGTCAT+TGG - chr1_1:60832113-60832132 None:intergenic 40.0%
CAATGACACTGTCTCAAAGT+TGG + chr1_1:60832111-60832130 Msa0033370:intron 40.0%
!!! TACGTTTTCATTGGCTTCTC+AGG + chr1_1:60832246-60832265 Msa0033370:intron 40.0%
! CCGCTATTTAACAACGCTTT+TGG - chr1_1:60832396-60832415 None:intergenic 40.0%
ATAGCAGCGCTATAGTTTAG+TGG + chr1_1:60832418-60832437 Msa0033370:intron 40.0%
ACTCCAGACCACTTTATATG+AGG - chr1_1:60832685-60832704 None:intergenic 40.0%
! TATAAAGTGGTCTGGAGTTG+AGG + chr1_1:60832687-60832706 Msa0033370:CDS 40.0%
! ATAAAGTGGTCTGGAGTTGA+GGG + chr1_1:60832688-60832707 Msa0033370:CDS 40.0%
GAGTAGAGTATATGCACTCT+CGG + chr1_1:60832926-60832945 Msa0033370:CDS 40.0%
AGTAGAGTATATGCACTCTC+GGG + chr1_1:60832927-60832946 Msa0033370:CDS 40.0%
! AAAGCCCGACAATTTTCTGA+TGG + chr1_1:60832969-60832988 Msa0033370:CDS 40.0%
! AAGCCCGACAATTTTCTGAT+GGG + chr1_1:60832970-60832989 Msa0033370:CDS 40.0%
! TAGATACCTGATTTGCCTTG+CGG - chr1_1:60833002-60833021 None:intergenic 40.0%
TTGAAGAATGCCAGTTAGAG+AGG - chr1_1:60833092-60833111 None:intergenic 40.0%
! ACTGGCATTCTTCAAGTTCT+AGG + chr1_1:60833097-60833116 Msa0033370:intron 40.0%
! GGTGCTGCCAAAAGAAATAA+AGG - chr1_1:60833269-60833288 None:intergenic 40.0%
TTCCACTCCTGTTACATGAA+TGG + chr1_1:60833824-60833843 Msa0033370:intron 40.0%
AACCATTCATGTAACAGGAG+TGG - chr1_1:60833829-60833848 None:intergenic 40.0%
AGTGCAACCATTCATGTAAC+AGG - chr1_1:60833834-60833853 None:intergenic 40.0%
AGGGAAAACAAGAATCTCAC+TGG + chr1_1:60833868-60833887 Msa0033370:intron 40.0%
! TTTCTTTTTCCAGCCTTCCA+TGG + chr1_1:60834183-60834202 Msa0033370:intron 40.0%
CTAGAACTGGATCCAATTTG+TGG - chr1_1:60834857-60834876 None:intergenic 40.0%
!! TTGGATCCAGTTCTAGAACA+CGG + chr1_1:60834861-60834880 Msa0033370:CDS 40.0%
AGATAGATTATCAGGTGCAG+TGG + chr1_1:60835386-60835405 Msa0033370:CDS 40.0%
GATAGATTATCAGGTGCAGT+GGG + chr1_1:60835387-60835406 Msa0033370:CDS 40.0%
ATAGATTATCAGGTGCAGTG+GGG + chr1_1:60835388-60835407 Msa0033370:CDS 40.0%
!! GGGCATTTTCAAGAAGGAAT+GGG + chr1_1:60835409-60835428 Msa0033370:CDS 40.0%
! CTAACCACATCTTTGGAAGA+CGG - chr1_1:60835474-60835493 None:intergenic 40.0%
TTGCTACAAAGATCCAGTGT+TGG - chr1_1:60835601-60835620 None:intergenic 40.0%
TGTAGCAACCTGATTCTGAT+AGG + chr1_1:60835613-60835632 Msa0033370:intron 40.0%
GTAGCAACCTGATTCTGATA+GGG + chr1_1:60835614-60835633 Msa0033370:intron 40.0%
GTAATGGCAGTGCTTCAAAA+AGG + chr1_1:60835652-60835671 Msa0033370:CDS 40.0%
! GGTCTGCTACTTGATATCAT+AGG - chr1_1:60835678-60835697 None:intergenic 40.0%
! GATGATTTGGATTCAAGACC+AGG - chr1_1:60835786-60835805 None:intergenic 40.0%
!! GCATCTGAAGAAGCATTTGA+GGG - chr1_1:60836054-60836073 None:intergenic 40.0%
!! AGCATCTGAAGAAGCATTTG+AGG - chr1_1:60836055-60836074 None:intergenic 40.0%
TATCACCCTTCCATTGCATT+TGG + chr1_1:60836236-60836255 Msa0033370:three_prime_UTR 40.0%
ATCACCCTTCCATTGCATTT+GGG + chr1_1:60836237-60836256 Msa0033370:three_prime_UTR 40.0%
GGTGGCTCCTAATTTAGATT+GGG + chr1_1:60836275-60836294 Msa0033370:three_prime_UTR 40.0%
GTGGCTCCTAATTTAGATTG+GGG + chr1_1:60836276-60836295 Msa0033370:three_prime_UTR 40.0%
! GGAAGTGTGAATGATTGTGG+TGG - chr1_1:60830393-60830412 None:intergenic 45.0%
TAAGGATTTGGATCTGTGCG+TGG - chr1_1:60830486-60830505 None:intergenic 45.0%
TTGACGGAGAGAGAAGAGTA+AGG - chr1_1:60830504-60830523 None:intergenic 45.0%
TGGGTGAGAAGCGATATTGA+CGG - chr1_1:60830520-60830539 None:intergenic 45.0%
CTTGGGAGGAAAATTGGAAG+TGG + chr1_1:60830798-60830817 Msa0033370:CDS 45.0%
TGTGCAAACTCAAGAGGAAG+TGG + chr1_1:60830939-60830958 Msa0033370:CDS 45.0%
GCTGGTGAGTGAAGTTGTTA+TGG + chr1_1:60830969-60830988 Msa0033370:intron 45.0%
CTTTCTCTCTTACCCGCAAT+TGG + chr1_1:60831307-60831326 Msa0033370:intron 45.0%
GTCTGTGCTACAGTGGATAT+AGG - chr1_1:60831341-60831360 None:intergenic 45.0%
!! CAAAAGTGTCTGTGCTACAG+TGG - chr1_1:60831348-60831367 None:intergenic 45.0%
GTGTATGGGTACAGGTACTT+AGG - chr1_1:60831524-60831543 None:intergenic 45.0%
CAGGTAATGTGTATGGGTAC+AGG - chr1_1:60831532-60831551 None:intergenic 45.0%
CAAGCTCTTGAACATCTTGG+TGG - chr1_1:60831942-60831961 None:intergenic 45.0%
CACCAAGATGTTCAAGAGCT+TGG + chr1_1:60831940-60831959 Msa0033370:intron 45.0%
GACCAAGCTCTTGAACATCT+TGG - chr1_1:60831945-60831964 None:intergenic 45.0%
TGAGGATGCTTTGTCTTCAC+AGG - chr1_1:60832274-60832293 None:intergenic 45.0%
TTGGACTCGTAGAGAAGTTG+AGG - chr1_1:60832292-60832311 None:intergenic 45.0%
ACTTGGTCCAAGAAGGTCAA+TGG - chr1_1:60832731-60832750 None:intergenic 45.0%
GTAGAGTATATGCACTCTCG+GGG + chr1_1:60832928-60832947 Msa0033370:CDS 45.0%
GCATGACATACCTCTCTAAC+TGG + chr1_1:60833079-60833098 Msa0033370:intron 45.0%
GCAAGTGTTAACACTCACCT+TGG + chr1_1:60833904-60833923 Msa0033370:CDS 45.0%
GTTAACACTCACCTTGGAGT+TGG + chr1_1:60833910-60833929 Msa0033370:CDS 45.0%
CTTTCATTCCTTGCCATGGA+AGG - chr1_1:60834199-60834218 None:intergenic 45.0%
TCCACTATTGCCGATCATTG+CGG + chr1_1:60834631-60834650 Msa0033370:CDS 45.0%
CTTCTCGAATGAATAGGTCC+CGG - chr1_1:60834698-60834717 None:intergenic 45.0%
!! TGGATCCAGTTCTAGAACAC+GGG + chr1_1:60834862-60834881 Msa0033370:CDS 45.0%
!! ACTAACCCGTGTTCTAGAAC+TGG - chr1_1:60834870-60834889 None:intergenic 45.0%
GTGAAACCAGTCTTAAACCC+AGG + chr1_1:60834976-60834995 Msa0033370:CDS 45.0%
CATCTGGAGAGCGATTAGAA+CGG + chr1_1:60835001-60835020 Msa0033370:CDS 45.0%
TAGATTATCAGGTGCAGTGG+GGG + chr1_1:60835389-60835408 Msa0033370:CDS 45.0%
!! GGGGCATTTTCAAGAAGGAA+TGG + chr1_1:60835408-60835427 Msa0033370:CDS 45.0%
TATGCCGTCTTCCAAAGATG+TGG + chr1_1:60835467-60835486 Msa0033370:CDS 45.0%
TCGAGATCAATCGACTAGAC+CGG - chr1_1:60835728-60835747 None:intergenic 45.0%
! TCGTCTATCGACTACTCAGA+GGG + chr1_1:60835755-60835774 Msa0033370:CDS 45.0%
!! AGCTTTGAGCTCCTGTCAAT+TGG + chr1_1:60835855-60835874 Msa0033370:CDS 45.0%
! TTTTCCCGGTACCAATTGAC+AGG - chr1_1:60835869-60835888 None:intergenic 45.0%
AAATGAACAGGTGTGAAGGG+TGG - chr1_1:60835949-60835968 None:intergenic 45.0%
! ATTTGGGACCCCTCTAATAG+TGG + chr1_1:60836253-60836272 Msa0033370:three_prime_UTR 45.0%
! TTTGGGACCCCTCTAATAGT+GGG + chr1_1:60836254-60836273 Msa0033370:three_prime_UTR 45.0%
GGGTGGCTCCTAATTTAGAT+TGG + chr1_1:60836274-60836293 Msa0033370:three_prime_UTR 45.0%
! AGAATGTTTGGAGCCTCCTT+AGG + chr1_1:60836331-60836350 Msa0033370:three_prime_UTR 45.0%
!! AAAAATTTAAAAAATCTAAT+GGG - chr1_1:60830539-60830558 None:intergenic 5.0%
!! AAAAAATTTAAAAAATCTAA+TGG - chr1_1:60830540-60830559 None:intergenic 5.0%
!!! TTTTTTTTTAAAATAAACTT+CGG + chr1_1:60831415-60831434 Msa0033370:intron 5.0%
!!! AGTATTTTTATTAAATTATT+AGG - chr1_1:60832060-60832079 None:intergenic 5.0%
!!! TTTATTTTAAGTAAAAAATA+TGG - chr1_1:60834479-60834498 None:intergenic 5.0%
AGAGGAAGTGGCTGTTAAGC+TGG + chr1_1:60830951-60830970 Msa0033370:CDS 50.0%
ACAGTGCTATAACGGCGCTA+TGG + chr1_1:60832501-60832520 Msa0033370:intron 50.0%
GCTATGGCACTATTGCGTAG+CGG + chr1_1:60832517-60832536 Msa0033370:intron 50.0%
TGAGGGCGAGTACAATGTCA+TGG + chr1_1:60832705-60832724 Msa0033370:CDS 50.0%
GTCATGGCCATTGACCTTCT+TGG + chr1_1:60832721-60832740 Msa0033370:CDS 50.0%
! CTTCGAGACTTGGTCCAAGA+AGG - chr1_1:60832738-60832757 None:intergenic 50.0%
TTTAGGCCGCAAGGCAAATC+AGG + chr1_1:60832993-60833012 Msa0033370:CDS 50.0%
! TTTTCCAGCCTTCCATGGCA+AGG + chr1_1:60834188-60834207 Msa0033370:intron 50.0%
CCAGCTTTCATTCCTTGCCA+TGG - chr1_1:60834203-60834222 None:intergenic 50.0%
CCATGGCAAGGAATGAAAGC+TGG + chr1_1:60834200-60834219 Msa0033370:CDS 50.0%
ACCGCAATGATCGGCAATAG+TGG - chr1_1:60834635-60834654 None:intergenic 50.0%
CGGGACCTATTCATTCGAGA+AGG + chr1_1:60834696-60834715 Msa0033370:CDS 50.0%
! GATGGTCCTGGGTTTAAGAC+TGG - chr1_1:60834985-60835004 None:intergenic 50.0%
GTCTTAAACCCAGGACCATC+TGG + chr1_1:60834985-60835004 Msa0033370:CDS 50.0%
CGTTCTAATCGCTCTCCAGA+TGG - chr1_1:60835003-60835022 None:intergenic 50.0%
!!! CAGTGGGGGCATTTTCAAGA+AGG + chr1_1:60835403-60835422 Msa0033370:CDS 50.0%
GCTCGCAGTTCTACTCGTAA+TGG + chr1_1:60835636-60835655 Msa0033370:CDS 50.0%
AGTAGCAGACCAAGCTCTTC+TGG + chr1_1:60835687-60835706 Msa0033370:CDS 50.0%
GTAGCAGACCAAGCTCTTCT+GGG + chr1_1:60835688-60835707 Msa0033370:CDS 50.0%
TAGCAGACCAAGCTCTTCTG+GGG + chr1_1:60835689-60835708 Msa0033370:CDS 50.0%
! GTCGTCTATCGACTACTCAG+AGG + chr1_1:60835754-60835773 Msa0033370:CDS 50.0%
ACTACTCAGAGGGTTCAACC+TGG + chr1_1:60835765-60835784 Msa0033370:CDS 50.0%
GGTACGGGTGAAGGATGATT+TGG - chr1_1:60835799-60835818 None:intergenic 50.0%
GAGCTCCTGTCAATTGGTAC+CGG + chr1_1:60835861-60835880 Msa0033370:CDS 50.0%
AGCTCCTGTCAATTGGTACC+GGG + chr1_1:60835862-60835881 Msa0033370:CDS 50.0%
CCATGAATGGACCACAACAC+AGG - chr1_1:60835990-60836009 None:intergenic 50.0%
CCTGTGTTGTGGTCCATTCA+TGG + chr1_1:60835987-60836006 Msa0033370:three_prime_UTR 50.0%
GGGTCCCAAATGCAATGGAA+GGG - chr1_1:60836244-60836263 None:intergenic 50.0%
TAGAGGGGTCCCAAATGCAA+TGG - chr1_1:60836249-60836268 None:intergenic 50.0%
AGGAGCCACCCACTATTAGA+GGG - chr1_1:60836265-60836284 None:intergenic 50.0%
TAGGAGCCACCCACTATTAG+AGG - chr1_1:60836266-60836285 None:intergenic 50.0%
GGATTTGGATCTGTGCGTGG+AGG - chr1_1:60830483-60830502 None:intergenic 55.0%
CGGTACGCAATTGACAGCAC+TGG + chr1_1:60832565-60832584 Msa0033370:intron 55.0%
!! AATTGACAGCACTGGCAGCC+AGG + chr1_1:60832573-60832592 Msa0033370:intron 55.0%
!! TCTGATGGGTTTAGGCCGCA+AGG + chr1_1:60832984-60833003 Msa0033370:CDS 55.0%
!! CACCTTGGAGTTGGTGAGTG+AGG + chr1_1:60833919-60833938 Msa0033370:intron 55.0%
TGCCTCACTCACCAACTCCA+AGG - chr1_1:60833924-60833943 None:intergenic 55.0%
CATTCCTTGCCATGGAAGGC+TGG - chr1_1:60834195-60834214 None:intergenic 55.0%
ATCGCTCTCCAGATGGTCCT+GGG - chr1_1:60834996-60835015 None:intergenic 55.0%
AATCGCTCTCCAGATGGTCC+TGG - chr1_1:60834997-60835016 None:intergenic 55.0%
GAGCGATTAGAACGGCCTTC+AGG + chr1_1:60835009-60835028 Msa0033370:CDS 55.0%
AGAAGGAATGGGTCTGCGCA+AGG + chr1_1:60835420-60835439 Msa0033370:CDS 55.0%
CTGCGAGCCCTATCAGAATC+AGG - chr1_1:60835624-60835643 None:intergenic 55.0%
CTAGGTTCCCCAGAAGAGCT+TGG - chr1_1:60835699-60835718 None:intergenic 55.0%
CTGGGGAACCTAGTGAAAGC+CGG + chr1_1:60835706-60835725 Msa0033370:CDS 55.0%
! CGACTAGACCGGCTTTCACT+AGG - chr1_1:60835717-60835736 None:intergenic 55.0%
GGGGTCCCAAATGCAATGGA+AGG - chr1_1:60836245-60836264 None:intergenic 55.0%
GGAGCCACCCACTATTAGAG+GGG - chr1_1:60836264-60836283 None:intergenic 55.0%
GGATCTGTGCGTGGAGGTGA+AGG - chr1_1:60830477-60830496 None:intergenic 60.0%
CTGCGCAAGGACTGCAGCAT+AGG + chr1_1:60835433-60835452 Msa0033370:CDS 60.0%
TCATCCTTCACCCGTACCGC+AGG + chr1_1:60835801-60835820 Msa0033370:CDS 60.0%
CATCCTTCACCCGTACCGCA+GGG + chr1_1:60835802-60835821 Msa0033370:CDS 60.0%
! GGGACCCCTCTAATAGTGGG+TGG + chr1_1:60836257-60836276 Msa0033370:three_prime_UTR 60.0%
TGTCCCTGCGGTACGGGTGA+AGG - chr1_1:60835808-60835827 None:intergenic 65.0%
ACCTCGTGTCCCTGCGGTAC+GGG - chr1_1:60835814-60835833 None:intergenic 65.0%
CACCTCGTGTCCCTGCGGTA+CGG - chr1_1:60835815-60835834 None:intergenic 65.0%
ACCCGTACCGCAGGGACACG+AGG + chr1_1:60835810-60835829 Msa0033370:CDS 70.0%
CGTACCGCAGGGACACGAGG+TGG + chr1_1:60835813-60835832 Msa0033370:CDS 70.0%
GCGACCACCTCGTGTCCCTG+CGG - chr1_1:60835820-60835839 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 60830386 60836519 60830386 ID=Msa0033370;Name=Msa0033370
chr1_1 mRNA 60830386 60836519 60830386 ID=Msa0033370-mRNA-1;Parent=Msa0033370;Name=Msa0033370-mRNA-1;_AED=0.17;_eAED=0.17;_QI=379|1|1|1|1|1|14|623|458
chr1_1 exon 60830386 60830843 60830386 ID=Msa0033370-mRNA-1:exon:19055;Parent=Msa0033370-mRNA-1
chr1_1 exon 60830932 60830972 60830932 ID=Msa0033370-mRNA-1:exon:19056;Parent=Msa0033370-mRNA-1
chr1_1 exon 60832268 60832337 60832268 ID=Msa0033370-mRNA-1:exon:19057;Parent=Msa0033370-mRNA-1
chr1_1 exon 60832674 60832822 60832674 ID=Msa0033370-mRNA-1:exon:19058;Parent=Msa0033370-mRNA-1
chr1_1 exon 60832919 60833014 60832919 ID=Msa0033370-mRNA-1:exon:19059;Parent=Msa0033370-mRNA-1
chr1_1 exon 60833369 60833439 60833369 ID=Msa0033370-mRNA-1:exon:19060;Parent=Msa0033370-mRNA-1
chr1_1 exon 60833870 60833931 60833870 ID=Msa0033370-mRNA-1:exon:19061;Parent=Msa0033370-mRNA-1
chr1_1 exon 60834052 60834115 60834052 ID=Msa0033370-mRNA-1:exon:19062;Parent=Msa0033370-mRNA-1
chr1_1 exon 60834196 60834280 60834196 ID=Msa0033370-mRNA-1:exon:19063;Parent=Msa0033370-mRNA-1
chr1_1 exon 60834591 60834717 60834591 ID=Msa0033370-mRNA-1:exon:19064;Parent=Msa0033370-mRNA-1
chr1_1 exon 60834810 60834883 60834810 ID=Msa0033370-mRNA-1:exon:19065;Parent=Msa0033370-mRNA-1
chr1_1 exon 60834970 60835030 60834970 ID=Msa0033370-mRNA-1:exon:19066;Parent=Msa0033370-mRNA-1
chr1_1 exon 60835370 60835488 60835370 ID=Msa0033370-mRNA-1:exon:19067;Parent=Msa0033370-mRNA-1
chr1_1 exon 60835618 60836519 60835618 ID=Msa0033370-mRNA-1:exon:19068;Parent=Msa0033370-mRNA-1
chr1_1 five_prime_UTR 60830386 60830764 60830386 ID=Msa0033370-mRNA-1:five_prime_utr;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60830765 60830843 60830765 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60830932 60830972 60830932 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60832268 60832337 60832268 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60832674 60832822 60832674 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60832919 60833014 60832919 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60833369 60833439 60833369 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60833870 60833931 60833870 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60834052 60834115 60834052 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60834196 60834280 60834196 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60834591 60834717 60834591 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60834810 60834883 60834810 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60834970 60835030 60834970 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60835370 60835488 60835370 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 CDS 60835618 60835896 60835618 ID=Msa0033370-mRNA-1:cds;Parent=Msa0033370-mRNA-1
chr1_1 three_prime_UTR 60835897 60836519 60835897 ID=Msa0033370-mRNA-1:three_prime_utr;Parent=Msa0033370-mRNA-1
Gene Sequence

>Msa0033370

ATGATGGATCTTGTTATTGGTGGAAAATTCAAACTTGGGAGGAAAATTGGAAGTGGGTCATTTGGAGAAATTTATTTGGGTGTTAATGTGCAAACTCAAGAGGAAGTGGCTGTTAAGCTGGAACCTGTGAAGACAAAGCATCCTCAACTTCTCTACGAGTCCAAATTGTATATGCTTCTTCAAGGAGGAACTGGAATACCTCATATAAAGTGGTCTGGAGTTGAGGGCGAGTACAATGTCATGGCCATTGACCTTCTTGGACCAAGTCTCGAAGACTTATTTAACTATTGTAGTAGAAAATTCTCTCTTAAGACAGTGTTGATGCTTGCTGATCAACTAATAAACAGAGTAGAGTATATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCCGACAATTTTCTGATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATTATTGACTACGGCCTTGCAAAAAAGTATCGTGATCTTCAGACACATAAGCATATACCATACAGGGAAAACAAGAATCTCACTGGAACTGCTCGATATGCAAGTGTTAACACTCACCTTGGAGTTGAGCAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTACTCATGTACTTTTTGAGAGGAAGCCTTCCATGGCAAGGAATGAAAGCTGGCACTAAAAAGCAGAAATACGACAAGATAAGTGAAAAGAAAATGCTTACTCCAATAGAGGTATTGTGCAAGTCACATCCAACAGAATTCACATCATATTTCCACTATTGCCGATCATTGCGGTTTGAAGATAAACCCGATTATTCATATCTTAAGAGACTCTTCCGGGACCTATTCATTCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAGTATCCACAAATTGGATCCAGTTCTAGAACACGGCCAAGTGTGAAACCAGTCTTAAACCCAGGACCATCTGGAGAGCGATTAGAACGGCCTTCAGTCGGACAAGAAATTCGAGATAGATTATCAGGTGCAGTGGGGGCATTTTCAAGAAGGAATGGGTCTGCGCAAGGACTGCAGCATAGGTCTCTAGATAATATGCCGTCTTCCAAAGATGTGCAACCTGATTCTGATAGGGCTCGCAGTTCTACTCGTAATGGCAGTGCTTCAAAAAGGCCTATGATATCAAGTAGCAGACCAAGCTCTTCTGGGGAACCTAGTGAAAGCCGGTCTAGTCGATTGATCTCGAGCAGTAGTCGTCTATCGACTACTCAGAGGGTTCAACCTGGTCTTGAATCCAAATCATCCTTCACCCGTACCGCAGGGACACGAGGTGGTCGCGATGATACACTCAAGAGCTTTGAGCTCCTGTCAATTGGTACCGGGAAAAGAAAATAA
Protein sequence

>Msa0033370

MMDLVIGGKFKLGRKIGSGSFGEIYLGVNVQTQEEVAVKLEPVKTKHPQLLYESKLYMLLQGGTGIPHIKWSGVEGEYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGMKAGTKKQKYDKISEKKMLTPIEVLCKSHPTEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSVKPVLNPGPSGERLERPSVGQEIRDRLSGAVGAFSRRNGSAQGLQHRSLDNMPSSKDVQPDSDRARSSTRNGSASKRPMISSSRPSSSGEPSESRSSRLISSSSRLSTTQRVQPGLESKSSFTRTAGTRGGRDDTLKSFELLSIGTGKRK*