Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033700 | XP_003590542.1 | 97.552 | 572 | 14 | 0 | 65 | 636 | 25 | 596 | 0.0 | 1169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033700 | sp|Q96PP9|GBP4_HUMAN | 27.869 | 427 | 265 | 17 | 63 | 459 | 21 | 434 | 7.50e-31 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033700 | Msa0124000 | 0.887480 | 1.375112e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033700 | MtrunA17_Chr7g0260571 | 79.581 | 573 | 113 | 2 | 65 | 636 | 29 | 598 | 0.0 | 970 |
| Msa0033700 | MtrunA17_Chr1g0184861 | 96.912 | 421 | 13 | 0 | 216 | 636 | 4 | 424 | 0.0 | 858 |
| Msa0033700 | MtrunA17_Chr1g0184871 | 99.342 | 152 | 1 | 0 | 65 | 216 | 25 | 176 | 2.31e-104 | 314 |
| Msa0033700 | MtrunA17_Chr4g0046381 | 27.431 | 401 | 260 | 12 | 77 | 452 | 49 | 443 | 4.25e-31 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033700 | AT2G38840.1 | 76.049 | 572 | 136 | 1 | 66 | 636 | 31 | 602 | 0.0 | 937 |
| Msa0033700 | AT2G38840.2 | 72.009 | 443 | 123 | 1 | 195 | 636 | 2 | 444 | 0.0 | 692 |
| Msa0033700 | AT5G46070.1 | 26.503 | 449 | 277 | 17 | 77 | 491 | 52 | 481 | 2.20e-30 | 128 |
Find 147 sgRNAs with CRISPR-Local
Find 839 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGCTAACCATTGGTATT+TGG | 0.183497 | 1_1:+61332365 | None:intergenic |
| CTTCATTTCTAGACCTATTA+TGG | 0.184112 | 1_1:+61330517 | None:intergenic |
| GGTTCATATCTTCAGGGATA+TGG | 0.198457 | 1_1:-61334147 | Msa0033700:intron |
| GTCTTCCCTTGTACAATCTT+TGG | 0.214786 | 1_1:+61331100 | None:intergenic |
| GTACAAGGGAAGACTTTAAA+TGG | 0.240506 | 1_1:-61331091 | Msa0033700:CDS |
| TTCTTATTGCTTCTGTATAA+AGG | 0.255051 | 1_1:+61329216 | None:intergenic |
| TGGAGTTATGGGAGGAAATA+TGG | 0.274235 | 1_1:-61329255 | Msa0033700:CDS |
| GGTGGTGTTCTCCCTGATTA+TGG | 0.277067 | 1_1:-61329820 | Msa0033700:CDS |
| ATCTTCAGGGATATGGGTTT+GGG | 0.296404 | 1_1:-61334140 | Msa0033700:intron |
| GGTGCTAACCATTGGTATTT+GGG | 0.302976 | 1_1:+61332366 | None:intergenic |
| CCGTCTTTCAAGAGAAGGTT+TGG | 0.303690 | 1_1:-61334669 | Msa0033700:CDS |
| GGTTGTTTCTATCAGGTGAT+TGG | 0.306331 | 1_1:-61334456 | Msa0033700:intron |
| TTATCTATTGGTGGAGTTAT+GGG | 0.313121 | 1_1:-61329266 | Msa0033700:CDS |
| TCATTATGGCTCAAACTTCT+TGG | 0.320831 | 1_1:-61342805 | None:intergenic |
| ATTATCTATTGGTGGAGTTA+TGG | 0.322724 | 1_1:-61329267 | Msa0033700:CDS |
| TGTCAGTGTTTATTATCTAT+TGG | 0.326880 | 1_1:-61329278 | Msa0033700:CDS |
| TGTTGGAAGGCGAGGCAGTT+AGG | 0.329990 | 1_1:-61342763 | Msa0033700:CDS |
| TAGTCTGTTCTTTGTCGATT+TGG | 0.335335 | 1_1:+61329189 | None:intergenic |
| AGACCTACACTAAGATGTTT+TGG | 0.339622 | 1_1:-61329725 | Msa0033700:CDS |
| ATCTTATGATATCCAATGTT+TGG | 0.348105 | 1_1:+61328969 | None:intergenic |
| TATCTTCAGGGATATGGGTT+TGG | 0.359310 | 1_1:-61334141 | Msa0033700:intron |
| GTTGGAAGGCGAGGCAGTTA+GGG | 0.359848 | 1_1:-61342762 | Msa0033700:CDS |
| AATCTATGATGTTGTATATG+AGG | 0.360578 | 1_1:-61329166 | Msa0033700:three_prime_UTR |
| CTCTCTCTTTCTTGTTATGA+AGG | 0.364281 | 1_1:-61334393 | Msa0033700:intron |
| TTCTTCAGGTTAATCAGATC+CGG | 0.366789 | 1_1:-61332139 | Msa0033700:intron |
| TCTTGTTTACAACCCAATCT+TGG | 0.374066 | 1_1:-61329643 | Msa0033700:CDS |
| GTCCAATCACAACCATAATC+AGG | 0.380791 | 1_1:+61329808 | None:intergenic |
| ATCTGCAAGGGGTCCATAAT+AGG | 0.389286 | 1_1:-61330530 | Msa0033700:CDS |
| ATATGAATTATGCAGATGTT+AGG | 0.389320 | 1_1:-61329897 | Msa0033700:intron |
| GTCTAGGTCTCAATTTATAA+AGG | 0.392710 | 1_1:-61329871 | Msa0033700:CDS |
| TCCCTGATTATGGTTGTGAT+TGG | 0.394032 | 1_1:-61329810 | Msa0033700:CDS |
| CATCAGATGTGAGGACAAAA+TGG | 0.395664 | 1_1:-61330111 | Msa0033700:CDS |
| GCATTCCTTTGTTCAACTTA+GGG | 0.399191 | 1_1:-61329058 | Msa0033700:three_prime_UTR |
| CCGGGACTCGCTGGCTATGA+TGG | 0.403209 | 1_1:-61332120 | Msa0033700:CDS |
| TGGAATTTCTCCTTTGTTCA+AGG | 0.405123 | 1_1:+61330659 | None:intergenic |
| CCCATTGTTGAACCGGATCC+TGG | 0.406456 | 1_1:-61334704 | Msa0033700:CDS |
| GTATATGAGGGTATTATCTA+AGG | 0.408291 | 1_1:-61329153 | Msa0033700:three_prime_UTR |
| CAGAAGGATTTGAAAGTGTT+GGG | 0.409163 | 1_1:-61334060 | Msa0033700:CDS |
| GTTCATATCTTCAGGGATAT+GGG | 0.410204 | 1_1:-61334146 | Msa0033700:intron |
| CCAACCAATTGAAAAGCCTT+TGG | 0.411030 | 1_1:+61329841 | None:intergenic |
| GGGGTGTTCGCGGTTCGGTC+TGG | 0.412832 | 1_1:-61342742 | Msa0033700:CDS |
| ACCCAATCTTGGATCTTGAT+AGG | 0.419125 | 1_1:-61329632 | Msa0033700:intron |
| GTTGTTTCTATCAGGTGATT+GGG | 0.419388 | 1_1:-61334455 | Msa0033700:intron |
| TTATGCGACACGGATGAATA+AGG | 0.424156 | 1_1:-61329982 | Msa0033700:intron |
| GAGGCAACCTTGGTTAATAC+AGG | 0.424444 | 1_1:+61341486 | None:intergenic |
| TGCATTCCTTTGTTCAACTT+AGG | 0.425085 | 1_1:-61329059 | Msa0033700:three_prime_UTR |
| GTGATTGGGCCGCATCGATC+TGG | 0.427064 | 1_1:-61334441 | Msa0033700:CDS |
| ACCTATCAAGATCCAAGATT+GGG | 0.435645 | 1_1:+61329631 | None:intergenic |
| TACCTATCAAGATCCAAGAT+TGG | 0.435734 | 1_1:+61329630 | None:intergenic |
| GGCAGTTTATAGTTGCAACT+TGG | 0.443191 | 1_1:-61329671 | Msa0033700:CDS |
| AAAGGAGAAATTCCATCATC+AGG | 0.444665 | 1_1:-61330651 | Msa0033700:CDS |
| ACAGAAGGATTTGAAAGTGT+TGG | 0.445106 | 1_1:-61334061 | Msa0033700:CDS |
| TGTATAAAGGTAATAGCCAC+TGG | 0.447081 | 1_1:+61329229 | None:intergenic |
| ATGAGCCACAAGAGCTTAGC+TGG | 0.450263 | 1_1:+61332854 | None:intergenic |
| AGTTAGGGGTGTTCGCGGTT+CGG | 0.450550 | 1_1:-61342747 | Msa0033700:CDS |
| TTTCAAATCCTTCTGTATCA+AGG | 0.451129 | 1_1:+61334068 | None:intergenic |
| ATTTGTCTCTTTCCTAGAGC+AGG | 0.452821 | 1_1:-61331062 | Msa0033700:intron |
| AGTTCTCAGACTTCCTTCCT+TGG | 0.453232 | 1_1:-61330078 | Msa0033700:CDS |
| AGACATTATCTAACCGTCTC+AGG | 0.462018 | 1_1:+61333877 | None:intergenic |
| GTGAAAATTAAAGCAATCAA+TGG | 0.462104 | 1_1:-61329036 | Msa0033700:three_prime_UTR |
| CCATTGATATCTAACTCTAT+AGG | 0.466716 | 1_1:+61334112 | None:intergenic |
| TATGAATTATGCAGATGTTA+GGG | 0.467050 | 1_1:-61329896 | Msa0033700:intron |
| CCAGGATCCGGTTCAACAAT+GGG | 0.473920 | 1_1:+61334704 | None:intergenic |
| TTGAACCAGCTAAGCTCTTG+TGG | 0.474606 | 1_1:-61332859 | Msa0033700:CDS |
| CCTATAGAGTTAGATATCAA+TGG | 0.477737 | 1_1:-61334112 | Msa0033700:CDS |
| AATCTTTGGAGAGATTATAC+TGG | 0.481010 | 1_1:+61331114 | None:intergenic |
| GCAGTTTATAGTTGCAACTT+GGG | 0.483769 | 1_1:-61329670 | Msa0033700:CDS |
| CGGGACTCGCTGGCTATGAT+GGG | 0.485327 | 1_1:-61332119 | Msa0033700:CDS |
| CATACAGCCACAGATGCAAT+GGG | 0.489499 | 1_1:+61334623 | None:intergenic |
| TACAAGGGAAGACTTTAAAT+GGG | 0.490870 | 1_1:-61331090 | Msa0033700:CDS |
| ATACTTGACGCCTTGAACAA+AGG | 0.491328 | 1_1:-61330669 | Msa0033700:CDS |
| CACTTTACTATAATTCAGCT+TGG | 0.492552 | 1_1:-61329692 | Msa0033700:CDS |
| AGGGAAATCAGTGCAAGAAA+TGG | 0.493954 | 1_1:-61332411 | Msa0033700:CDS |
| ATCTCTCCAAAGATTGTACA+AGG | 0.496328 | 1_1:-61331106 | Msa0033700:CDS |
| ATCATCAGGCTCTCTTGTGG+AGG | 0.507934 | 1_1:-61330637 | Msa0033700:CDS |
| CACTGCCTTTAGTTTACCAC+AGG | 0.508535 | 1_1:-61332087 | Msa0033700:intron |
| TAATCAGATCCGGGACTCGC+TGG | 0.508570 | 1_1:-61332129 | Msa0033700:CDS |
| TCCTTGGCAAAATTTAATGC+AGG | 0.510402 | 1_1:-61330062 | Msa0033700:CDS |
| GTCGCATAATTTGTCTTCGA+AGG | 0.511700 | 1_1:+61329996 | None:intergenic |
| TCTTCAGGTTAATCAGATCC+GGG | 0.512115 | 1_1:-61332138 | Msa0033700:intron |
| TCCACAAGAGAGCCTGATGA+TGG | 0.512715 | 1_1:+61330639 | None:intergenic |
| TGCAGATATTCCTCAGAAAG+AGG | 0.512916 | 1_1:+61330546 | None:intergenic |
| ATCTATGATGTTGTATATGA+GGG | 0.517022 | 1_1:-61329165 | Msa0033700:three_prime_UTR |
| CCATCATAGCCAGCGAGTCC+CGG | 0.517381 | 1_1:+61332120 | None:intergenic |
| CAGTGTTTATTATCTATTGG+TGG | 0.519013 | 1_1:-61329275 | Msa0033700:CDS |
| ATGCGTGATGTCAAGACAAA+AGG | 0.520841 | 1_1:-61334253 | Msa0033700:intron |
| AAACTCCGTCTTTCAAGAGA+AGG | 0.525574 | 1_1:-61334674 | Msa0033700:CDS |
| TTGATTTCTTAGCATGGTGA+TGG | 0.525888 | 1_1:+61330463 | None:intergenic |
| TATTTCTTCATTCAGCTGCA+AGG | 0.526585 | 1_1:+61330440 | None:intergenic |
| CACTGACATAATTACACCAA+GGG | 0.528737 | 1_1:+61329293 | None:intergenic |
| ACACCATCATGGACACATCA+TGG | 0.534512 | 1_1:+61329127 | None:intergenic |
| AACAAACCCCATTGCATCTG+TGG | 0.536433 | 1_1:-61334630 | Msa0033700:CDS |
| GTAATTTACCTTGATACAGA+AGG | 0.536498 | 1_1:-61334076 | Msa0033700:CDS |
| ACATACAGCCACAGATGCAA+TGG | 0.537928 | 1_1:+61334622 | None:intergenic |
| GTTCGCGGTTCGGTCTGGAT+CGG | 0.538383 | 1_1:-61342737 | Msa0033700:CDS |
| AGAAGCTAAGTACCTGCTCT+AGG | 0.539412 | 1_1:+61331050 | None:intergenic |
| GCAAGGTTGATTTCTTAGCA+TGG | 0.543080 | 1_1:+61330457 | None:intergenic |
| ACATACCTGTGGTAAACTAA+AGG | 0.549025 | 1_1:+61332082 | None:intergenic |
| AAAACAAAATAACCAAACAT+TGG | 0.549901 | 1_1:-61328981 | Msa0033700:three_prime_UTR |
| TCTTTCAAGAGAAGGTTTGG+AGG | 0.549947 | 1_1:-61334666 | Msa0033700:CDS |
| AACAGATGGGCTATACCCCT+TGG | 0.552967 | 1_1:-61329309 | Msa0033700:intron |
| TCCATCATCAGGCTCTCTTG+TGG | 0.554158 | 1_1:-61330640 | Msa0033700:CDS |
| ACCAGGATCCGGTTCAACAA+TGG | 0.557282 | 1_1:+61334703 | None:intergenic |
| TGCAGATGTTAGGGAAGTCT+AGG | 0.561123 | 1_1:-61329887 | Msa0033700:intron |
| ATCAGCTATATGTTACGAGA+AGG | 0.566055 | 1_1:-61331159 | Msa0033700:CDS |
| TTACCGATCATCATATACAT+TGG | 0.566643 | 1_1:+61334033 | None:intergenic |
| TAAGAGAATCCACACCATCA+TGG | 0.567953 | 1_1:+61329116 | None:intergenic |
| GAGGCAGTTAGGGGTGTTCG+CGG | 0.570616 | 1_1:-61342752 | Msa0033700:CDS |
| AGGGAAGACTTTAAATGGGA+AGG | 0.572595 | 1_1:-61331086 | Msa0033700:CDS |
| TGTATATAACTTGCCTGAGA+CGG | 0.573446 | 1_1:-61333890 | Msa0033700:intron |
| ATTGGATCTACCTCTTTCTG+AGG | 0.579896 | 1_1:-61330556 | Msa0033700:CDS |
| CCAAACCTTCTCTTGAAAGA+CGG | 0.581740 | 1_1:+61334669 | None:intergenic |
| TTTCACCCTAAGTTGAACAA+AGG | 0.586013 | 1_1:+61329053 | None:intergenic |
| GCATATGAAGCTGACTGTGT+TGG | 0.587640 | 1_1:-61342780 | Msa0033700:CDS |
| GATGATCAGAGAGGCAACCT+TGG | 0.587808 | 1_1:+61341476 | None:intergenic |
| TTTCTGAGGAATATCTGCAA+GGG | 0.590444 | 1_1:-61330542 | Msa0033700:CDS |
| TCCAATCACAACCATAATCA+GGG | 0.595468 | 1_1:+61329809 | None:intergenic |
| AGTCCAATGTATATGATGAT+CGG | 0.595943 | 1_1:-61334036 | Msa0033700:intron |
| CTTTCTGAGGAATATCTGCA+AGG | 0.605099 | 1_1:-61330543 | Msa0033700:CDS |
| ATGATGTGTCCATGATGGTG+TGG | 0.606078 | 1_1:-61329125 | Msa0033700:three_prime_UTR |
| CAAAGAGTCCCAAATACCAA+TGG | 0.607239 | 1_1:-61332374 | Msa0033700:intron |
| CTCAACAGCCACATCTTCAG+AGG | 0.607921 | 1_1:-61331216 | Msa0033700:intron |
| AGCTTTGTCCTCTGAAGATG+TGG | 0.610417 | 1_1:+61331208 | None:intergenic |
| TCAGCTATATGTTACGAGAA+GGG | 0.611889 | 1_1:-61331158 | Msa0033700:CDS |
| TTATAAAGGAATACAACCAA+AGG | 0.616631 | 1_1:-61329857 | Msa0033700:CDS |
| CTGCCGTATGAACAGGGTGA+AGG | 0.622038 | 1_1:-61333018 | Msa0033700:intron |
| TCTATTGGTGGAGTTATGGG+AGG | 0.626756 | 1_1:-61329263 | Msa0033700:CDS |
| AGGCAACCTTGGTTAATACA+GGG | 0.631120 | 1_1:+61341487 | None:intergenic |
| TGTCCATGATGTGTCCATGA+TGG | 0.633080 | 1_1:-61329130 | Msa0033700:three_prime_UTR |
| TTCTGAGGAATATCTGCAAG+GGG | 0.635807 | 1_1:-61330541 | Msa0033700:CDS |
| TGACCAAAACATCTTAGTGT+AGG | 0.638635 | 1_1:+61329722 | None:intergenic |
| CGAAAGCCCTGTATTAACCA+AGG | 0.638825 | 1_1:-61341493 | Msa0033700:CDS |
| GCTGACTGTGTTGGAAGGCG+AGG | 0.648672 | 1_1:-61342771 | Msa0033700:CDS |
| ATGAAGCTGACTGTGTTGGA+AGG | 0.650352 | 1_1:-61342776 | Msa0033700:CDS |
| TTGGAAGGCGAGGCAGTTAG+GGG | 0.655383 | 1_1:-61342761 | Msa0033700:CDS |
| TCTTCAGGGATATGGGTTTG+GGG | 0.657175 | 1_1:-61334139 | Msa0033700:intron |
| ACACTGACATAATTACACCA+AGG | 0.658135 | 1_1:+61329292 | None:intergenic |
| GTATAAAGGTAATAGCCACT+GGG | 0.660242 | 1_1:+61329230 | None:intergenic |
| CGAAGACAAATTATGCGACA+CGG | 0.664350 | 1_1:-61329992 | Msa0033700:CDS |
| TCAATCTTCAAAACTCTGTG+AGG | 0.670636 | 1_1:-61330141 | Msa0033700:CDS |
| GGGACTCGCTGGCTATGATG+GGG | 0.675333 | 1_1:-61332118 | Msa0033700:CDS |
| GGCAATGTACATCAGATGTG+AGG | 0.676784 | 1_1:-61330120 | Msa0033700:CDS |
| ACTGACATAATTACACCAAG+GGG | 0.695219 | 1_1:+61329294 | None:intergenic |
| AAAATACGGGATGATCAGAG+AGG | 0.709365 | 1_1:+61341467 | None:intergenic |
| TCTCTCCAAAGATTGTACAA+GGG | 0.713949 | 1_1:-61331105 | Msa0033700:CDS |
| GGAGGAAATATGGATCCCAG+TGG | 0.763500 | 1_1:-61329245 | Msa0033700:CDS |
| ATACAGCCACAGATGCAATG+GGG | 0.781937 | 1_1:+61334624 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGCATTAATATATTTATTAT+TGG | + | chr1_1:61329381-61329400 | None:intergenic | 10.0% |
| !! | TATGAAATGAAATATATTAA+GGG | + | chr1_1:61331055-61331074 | None:intergenic | 10.0% |
| !!! | TAAGATAAAAAGTTTTTTTT+AGG | - | chr1_1:61331182-61331201 | Msa0033700:CDS | 10.0% |
| !!! | TATCAAAGTAATAATTATTT+TGG | - | chr1_1:61331236-61331255 | Msa0033700:intron | 10.0% |
| !! | TTTCAAAAAAAAAAAAACTT+TGG | - | chr1_1:61331871-61331890 | Msa0033700:intron | 10.0% |
| !!! | AATATTTTAAAATTGAAGTT+TGG | - | chr1_1:61332331-61332350 | Msa0033700:intron | 10.0% |
| !!! | CAAAAATTAACTTTAAAATA+GGG | + | chr1_1:61332725-61332744 | None:intergenic | 10.0% |
| !!! | ACAAAAATTAACTTTAAAAT+AGG | + | chr1_1:61332726-61332745 | None:intergenic | 10.0% |
| !!! | ATATGATTTTACTTTAAAAT+AGG | - | chr1_1:61332976-61332995 | Msa0033700:intron | 10.0% |
| !!! | TATGATTTTACTTTAAAATA+GGG | - | chr1_1:61332977-61332996 | Msa0033700:intron | 10.0% |
| !! | TTATTGTATAAAAAATTTGT+GGG | + | chr1_1:61333174-61333193 | None:intergenic | 10.0% |
| !!! | ACAAATTTTTTATACAATAA+GGG | - | chr1_1:61333174-61333193 | Msa0033700:intron | 10.0% |
| !!! | ATTTAACAATTTTTTTTAAC+GGG | + | chr1_1:61333886-61333905 | None:intergenic | 10.0% |
| !! | TTTAAAAAAAAAATACAAGA+TGG | + | chr1_1:61334800-61334819 | None:intergenic | 10.0% |
| !! | AAATATTATAAATTCTCATT+CGG | + | chr1_1:61335816-61335835 | None:intergenic | 10.0% |
| !! | TTTATTTATTTGTTTGAATA+TGG | - | chr1_1:61336785-61336804 | Msa0033700:intron | 10.0% |
| !!! | TAATCATTTTTATTATCTTT+TGG | - | chr1_1:61337595-61337614 | Msa0033700:intron | 10.0% |
| !!! | AATTTTTTATTGAAAAAATG+AGG | + | chr1_1:61338476-61338495 | None:intergenic | 10.0% |
| !!! | ATTTATTTACATGATTTTTT+TGG | - | chr1_1:61342424-61342443 | Msa0033700:intron | 10.0% |
| !!! | AAGTTTAATAACTGTTTTAA+AGG | - | chr1_1:61330690-61330709 | Msa0033700:intron | 15.0% |
| !!! | TTCTAAAATGATTTCTTTTT+TGG | + | chr1_1:61330946-61330965 | None:intergenic | 15.0% |
| !! | ATGAAATGAAATATATTAAG+GGG | + | chr1_1:61331054-61331073 | None:intergenic | 15.0% |
| !! | CTATGAAATGAAATATATTA+AGG | + | chr1_1:61331056-61331075 | None:intergenic | 15.0% |
| !! | CTTAATATATTTCATTTCAT+AGG | - | chr1_1:61331054-61331073 | Msa0033700:intron | 15.0% |
| !! | TTATTTATTCTATTATTACG+TGG | + | chr1_1:61331165-61331184 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAGGAAAGAAAAT+AGG | - | chr1_1:61331194-61331213 | Msa0033700:CDS | 15.0% |
| !! | TTAAATAAAGCCTTTATAAA+CGG | + | chr1_1:61331908-61331927 | None:intergenic | 15.0% |
| !!! | AGTCATATGTTTTTTTTTTA+GGG | + | chr1_1:61332121-61332140 | None:intergenic | 15.0% |
| !!! | AATTATGTTTTGATACATTT+TGG | + | chr1_1:61332420-61332439 | None:intergenic | 15.0% |
| !!! | GAAAAGTTGATATATTTATA+GGG | + | chr1_1:61332634-61332653 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+AGG | + | chr1_1:61332694-61332713 | None:intergenic | 15.0% |
| !!! | TAGTGTTTGAAAATTTTATA+GGG | - | chr1_1:61333008-61333027 | Msa0033700:intron | 15.0% |
| !!! | TTTTCTTGTTTAAATAAGTA+GGG | + | chr1_1:61333111-61333130 | None:intergenic | 15.0% |
| !! | TATTTAAACAAGAAAAGATA+TGG | - | chr1_1:61333115-61333134 | Msa0033700:intron | 15.0% |
| !! | TATTGTATAAAAAATTTGTG+GGG | + | chr1_1:61333173-61333192 | None:intergenic | 15.0% |
| !! | CTTATTGTATAAAAAATTTG+TGG | + | chr1_1:61333175-61333194 | None:intergenic | 15.0% |
| !!! | CACAAATTTTTTATACAATA+AGG | - | chr1_1:61333173-61333192 | Msa0033700:intron | 15.0% |
| !!! | ACAAATTTTATTTTTATGGT+TGG | + | chr1_1:61333263-61333282 | None:intergenic | 15.0% |
| !!! | TGTCACAAATTTTATTTTTA+TGG | + | chr1_1:61333267-61333286 | None:intergenic | 15.0% |
| !! | TCATAGATATGTTATAAATA+AGG | - | chr1_1:61333523-61333542 | Msa0033700:intron | 15.0% |
| !! | AACTACTATGTTTATTTATA+GGG | + | chr1_1:61333720-61333739 | None:intergenic | 15.0% |
| !! | AAACTACTATGTTTATTTAT+AGG | + | chr1_1:61333721-61333740 | None:intergenic | 15.0% |
| !! | ATTTATCAAATTGCAATAAA+TGG | + | chr1_1:61334341-61334360 | None:intergenic | 15.0% |
| !! | AAAGAAATAAACAAACAAAA+TGG | - | chr1_1:61334817-61334836 | Msa0033700:intron | 15.0% |
| !! | AAGAAAATGAAAAAAAATGA+AGG | + | chr1_1:61335662-61335681 | None:intergenic | 15.0% |
| !! | TCAAACATTAAAAATTCAAT+CGG | + | chr1_1:61335953-61335972 | None:intergenic | 15.0% |
| !! | ATAAGATTAGAAAGAAAATT+TGG | - | chr1_1:61336579-61336598 | Msa0033700:intron | 15.0% |
| !! | TAAGATTAGAAAGAAAATTT+GGG | - | chr1_1:61336580-61336599 | Msa0033700:intron | 15.0% |
| !!! | AAATGTGTTTTTTTTTTGTT+AGG | - | chr1_1:61337471-61337490 | Msa0033700:intron | 15.0% |
| !! | TTTAAAAAACATGGAAAATT+AGG | + | chr1_1:61339460-61339479 | None:intergenic | 15.0% |
| !! | TTACACTTTAAATTCTAATT+TGG | - | chr1_1:61339737-61339756 | Msa0033700:intron | 15.0% |
| !!! | TTTTGAAATAAATATGATTC+TGG | + | chr1_1:61339860-61339879 | None:intergenic | 15.0% |
| !!! | AAAATATCCGAATTTTATAA+AGG | + | chr1_1:61340788-61340807 | None:intergenic | 15.0% |
| !! | NNNNNNNNTAGTTAGTACTT+TGG | - | chr1_1:61341012-61341031 | Msa0033700:intron | 15.0% |
| !!! | TCAAAATCATATTAGTTTAT+TGG | + | chr1_1:61341060-61341079 | None:intergenic | 15.0% |
| !!! | AACTTTTGCTAATATATTTT+AGG | + | chr1_1:61341425-61341444 | None:intergenic | 15.0% |
| !! | ACTAAATCTTGAAATATAAT+TGG | + | chr1_1:61341542-61341561 | None:intergenic | 15.0% |
| !!! | AGATTTAGTAATAATTTTTC+TGG | - | chr1_1:61341553-61341572 | Msa0033700:CDS | 15.0% |
| !!! | GATTTAGTAATAATTTTTCT+GGG | - | chr1_1:61341554-61341573 | Msa0033700:CDS | 15.0% |
| !!! | ATTTAGTAATAATTTTTCTG+GGG | - | chr1_1:61341555-61341574 | Msa0033700:CDS | 15.0% |
| !!! | AGTATACAAATTTACTTTTG+CGG | - | chr1_1:61329429-61329448 | Msa0033700:intron | 20.0% |
| !!! | TTCAGAATTTAGTTTTAGAT+TGG | - | chr1_1:61330206-61330225 | Msa0033700:intron | 20.0% |
| !!! | AATTTAGTTTTAGATTGGTT+TGG | - | chr1_1:61330211-61330230 | Msa0033700:intron | 20.0% |
| !! | GGCAAAAAAATAAAAAATAC+GGG | + | chr1_1:61330312-61330331 | None:intergenic | 20.0% |
| !! | CGGCAAAAAAATAAAAAATA+CGG | + | chr1_1:61330313-61330332 | None:intergenic | 20.0% |
| !!! | CTTTGAAAGATGAAAATATA+AGG | - | chr1_1:61331318-61331337 | Msa0033700:intron | 20.0% |
| !!! | TATTCATATTTTATCGAACT+TGG | + | chr1_1:61331448-61331467 | None:intergenic | 20.0% |
| !!! | TTTTTTGAAAGTTAAATACG+CGG | + | chr1_1:61331861-61331880 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAACTTTGGAAGT+TGG | - | chr1_1:61331878-61331897 | Msa0033700:intron | 20.0% |
| !!! | CAGTCATATGTTTTTTTTTT+AGG | + | chr1_1:61332122-61332141 | None:intergenic | 20.0% |
| !!! | AACATATGACTGATTTTAAT+CGG | - | chr1_1:61332130-61332149 | Msa0033700:CDS | 20.0% |
| !!! | TGATATTTTTGATTGCTTTT+AGG | - | chr1_1:61332252-61332271 | Msa0033700:intron | 20.0% |
| !!! | TGCGATGATATATTTTAAAA+TGG | - | chr1_1:61332377-61332396 | Msa0033700:CDS | 20.0% |
| !!! | ATAGACAAATCATAATTTTG+AGG | + | chr1_1:61332506-61332525 | None:intergenic | 20.0% |
| !! | ATGAATTGAGTTACTTATTT+GGG | - | chr1_1:61332591-61332610 | Msa0033700:intron | 20.0% |
| !!! | ATTTGGGTTAAATATGTTTT+TGG | - | chr1_1:61332607-61332626 | Msa0033700:intron | 20.0% |
| !!! | CGAAAAGTTGATATATTTAT+AGG | + | chr1_1:61332635-61332654 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | chr1_1:61332698-61332717 | Msa0033700:intron | 20.0% |
| !!! | AAATTTTCAAACACTACTTT+TGG | + | chr1_1:61333004-61333023 | None:intergenic | 20.0% |
| !!! | GTAGTGTTTGAAAATTTTAT+AGG | - | chr1_1:61333007-61333026 | Msa0033700:intron | 20.0% |
| !!! | TGAAAAGTTGGTATATTTAT+AGG | - | chr1_1:61333067-61333086 | Msa0033700:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | - | chr1_1:61333068-61333087 | Msa0033700:intron | 20.0% |
| !!! | CTTTTCTTGTTTAAATAAGT+AGG | + | chr1_1:61333112-61333131 | None:intergenic | 20.0% |
| !! | TAACATTTAACCTTATATGA+AGG | - | chr1_1:61333234-61333253 | Msa0033700:CDS | 20.0% |
| !! | AACATTTAACCTTATATGAA+GGG | - | chr1_1:61333235-61333254 | Msa0033700:CDS | 20.0% |
| !! | AATAACCATATTATGAAATG+AGG | - | chr1_1:61333410-61333429 | Msa0033700:intron | 20.0% |
| !! | TATAACATATCTATGAGAAT+TGG | + | chr1_1:61333519-61333538 | None:intergenic | 20.0% |
| !!! | AAACTATTTTGAGTTTGAAT+GGG | + | chr1_1:61333821-61333840 | None:intergenic | 20.0% |
| !! | TTTCTATATCAAACTTAAAC+CGG | + | chr1_1:61334118-61334137 | None:intergenic | 20.0% |
| !! | TAAGTTTGATATAGAAAATG+CGG | - | chr1_1:61334121-61334140 | Msa0033700:CDS | 20.0% |
| !! | TTGCAATTTGATAAATTACT+TGG | - | chr1_1:61334345-61334364 | Msa0033700:intron | 20.0% |
| !!! | CAAAATAAAAACAAGTTGAA+AGG | - | chr1_1:61334690-61334709 | Msa0033700:CDS | 20.0% |
| !!! | CTTGGTAATTTCAATAAATT+TGG | + | chr1_1:61334744-61334763 | None:intergenic | 20.0% |
| !!! | ATCAAAAGTATGTATATTCA+AGG | - | chr1_1:61334767-61334786 | Msa0033700:intron | 20.0% |
| !! | AATAAACAAACAAAATGGTT+CGG | - | chr1_1:61334822-61334841 | Msa0033700:intron | 20.0% |
| !! | ATCATCTATTATGATCATTA+TGG | - | chr1_1:61335500-61335519 | Msa0033700:intron | 20.0% |
| !! | TATGATCATTATGGATAATA+TGG | - | chr1_1:61335509-61335528 | Msa0033700:intron | 20.0% |
| !! | ATGAAAAAAAATGAAGGAAT+TGG | + | chr1_1:61335656-61335675 | None:intergenic | 20.0% |
| !!! | TATCAACATTTTGTATAACA+CGG | - | chr1_1:61335854-61335873 | Msa0033700:intron | 20.0% |
| !! | AATAATATTGTAAAACACCA+TGG | - | chr1_1:61335881-61335900 | Msa0033700:intron | 20.0% |
| !! | ATAACAAGAGTAAAATTTAG+AGG | - | chr1_1:61336048-61336067 | Msa0033700:intron | 20.0% |
| !! | CGAAATTATAGACTTAAATA+TGG | - | chr1_1:61336437-61336456 | Msa0033700:intron | 20.0% |
| !! | AACTATTAAGAGATATTTAG+AGG | - | chr1_1:61336718-61336737 | Msa0033700:intron | 20.0% |
| !! | TATTATTCTATTCTGAATTG+TGG | - | chr1_1:61336905-61336924 | Msa0033700:intron | 20.0% |
| !!! | GTTTTTTTTTTGTTAGGATT+TGG | - | chr1_1:61337477-61337496 | Msa0033700:intron | 20.0% |
| !! | ACATTATATTATACTCAACA+AGG | + | chr1_1:61338012-61338031 | None:intergenic | 20.0% |
| !! | TGTTGAGTATAATATAATGT+TGG | - | chr1_1:61338012-61338031 | Msa0033700:intron | 20.0% |
| !! | ATTCGAGTAAATCTATTAAA+AGG | + | chr1_1:61338226-61338245 | None:intergenic | 20.0% |
| !! | AGAAATAAAGATTAGATCAA+TGG | + | chr1_1:61338796-61338815 | None:intergenic | 20.0% |
| !!! | GTTGATTTTGTTTGAATATA+TGG | - | chr1_1:61338854-61338873 | Msa0033700:intron | 20.0% |
| !!! | TGAATATATGGATATTTTGT+AGG | - | chr1_1:61338866-61338885 | Msa0033700:intron | 20.0% |
| !!! | GAATATATGGATATTTTGTA+GGG | - | chr1_1:61338867-61338886 | Msa0033700:intron | 20.0% |
| !! | TATTGAATATTGATAGAAAC+TGG | - | chr1_1:61339106-61339125 | Msa0033700:intron | 20.0% |
| !! | TGAATAAATAGTGAAATAGA+AGG | + | chr1_1:61339232-61339251 | None:intergenic | 20.0% |
| !!! | TGAAAAGGAATTCAATATTT+TGG | + | chr1_1:61339713-61339732 | None:intergenic | 20.0% |
| !! | TTAAAGTGTAAGAAATGAAA+AGG | + | chr1_1:61339728-61339747 | None:intergenic | 20.0% |
| !! | TCTAATTTGGATTTCTTTAT+CGG | - | chr1_1:61339750-61339769 | Msa0033700:intron | 20.0% |
| !!! | CATTTGAAATGATATGAAAA+TGG | - | chr1_1:61339820-61339839 | Msa0033700:intron | 20.0% |
| !! | ATTAGAATTGAAAAGTCAAT+AGG | + | chr1_1:61339988-61340007 | None:intergenic | 20.0% |
| !! | TCAATTCTAATGTCAAAATT+TGG | - | chr1_1:61339997-61340016 | Msa0033700:intron | 20.0% |
| !! | CAATTCTAATGTCAAAATTT+GGG | - | chr1_1:61339998-61340017 | Msa0033700:intron | 20.0% |
| !! | TGCTTAATTGTAAATTGTAT+TGG | + | chr1_1:61340097-61340116 | None:intergenic | 20.0% |
| !! | TATAATACTTATGAGATAAG+CGG | + | chr1_1:61340811-61340830 | None:intergenic | 20.0% |
| !! | TGAAAGCTGAAAAATTTAAT+TGG | - | chr1_1:61341377-61341396 | Msa0033700:intron | 20.0% |
| !!! | ATCAAAATATCTTTGATTTG+AGG | + | chr1_1:61341461-61341480 | None:intergenic | 20.0% |
| !!! | TCAAATCAAAGATATTTTGA+TGG | - | chr1_1:61341460-61341479 | Msa0033700:intron | 20.0% |
| !!! | AAGTTCATTTTGATTGAAAT+TGG | - | chr1_1:61341989-61342008 | Msa0033700:intron | 20.0% |
| !! | ATGTAAATAAATACTAAGCA+TGG | + | chr1_1:61342416-61342435 | None:intergenic | 20.0% |
| !! | AAAACAAAATAACCAAACAT+TGG | - | chr1_1:61342782-61342801 | Msa0033700:CDS | 20.0% |
| !!! | ACGTGATTTTTATTTTGGAT+CGG | + | chr1_1:61329071-61329090 | None:intergenic | 25.0% |
| ! | CAAATTAAACCGCATATATT+TGG | + | chr1_1:61329147-61329166 | None:intergenic | 25.0% |
| ! | CAAATATATGCGGTTTAATT+TGG | - | chr1_1:61329145-61329164 | Msa0033700:three_prime_UTR | 25.0% |
| ! | AAAAATTACATGTTGCACTT+TGG | + | chr1_1:61329187-61329206 | None:intergenic | 25.0% |
| ! | CTCATACATCGTAAAATAAT+AGG | - | chr1_1:61329225-61329244 | Msa0033700:CDS | 25.0% |
| !!! | CAAAAATATTCGGTTTTTTG+CGG | - | chr1_1:61329540-61329559 | Msa0033700:intron | 25.0% |
| !! | AATATAGCTTGTCAATATGT+TGG | + | chr1_1:61329706-61329725 | None:intergenic | 25.0% |
| !! | TTTGTAGAGTGTAAACATTT+TGG | - | chr1_1:61329938-61329957 | Msa0033700:intron | 25.0% |
| ! | TTGTTCATTCCTTATATTTC+TGG | - | chr1_1:61329797-61329816 | Msa0033700:CDS | 25.0% |
| ! | TGTTCATTCCTTATATTTCT+GGG | - | chr1_1:61329798-61329817 | Msa0033700:CDS | 25.0% |
| !! | TTTGTAGAGTGTAAACATTT+TGG | - | chr1_1:61329938-61329957 | Msa0033700:intron | 25.0% |
| !!! | GCAAAATCATATTGACTTAT+AGG | + | chr1_1:61330477-61330496 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTTTTTTTTCCGA+AGG | - | chr1_1:61330508-61330527 | Msa0033700:CDS | 25.0% |
| !! | AGTTTCTCTTTTGATAGAAT+TGG | + | chr1_1:61330555-61330574 | None:intergenic | 25.0% |
| !!! | TGTCTTTTGATTTATTTGAC+CGG | - | chr1_1:61330646-61330665 | Msa0033700:CDS | 25.0% |
| !! | AGTATTTAGAGAATAATGGA+GGG | - | chr1_1:61330738-61330757 | Msa0033700:intron | 25.0% |
| !! | AATCGGATAAATTTCTAGAA+GGG | - | chr1_1:61330984-61331003 | Msa0033700:intron | 25.0% |
| !!! | TATTTTTCAGTTGGATTACA+AGG | - | chr1_1:61331138-61331157 | Msa0033700:CDS | 25.0% |
| ! | ATTTATATGAGAAACACATC+CGG | - | chr1_1:61331349-61331368 | Msa0033700:intron | 25.0% |
| ! | TCAACATAATTAAAACAACC+CGG | + | chr1_1:61331371-61331390 | None:intergenic | 25.0% |
| ! | ATCAAACATAAAACTTTGAG+AGG | + | chr1_1:61331415-61331434 | None:intergenic | 25.0% |
| ! | TTATCATAAAATGATTGTGC+AGG | + | chr1_1:61331488-61331507 | None:intergenic | 25.0% |
| !!! | ACTTTTAAGAGACAACATTT+AGG | - | chr1_1:61331507-61331526 | Msa0033700:intron | 25.0% |
| !! | AACTTTCGAACAACTTTTTA+AGG | + | chr1_1:61331537-61331556 | None:intergenic | 25.0% |
| ! | AATAAAGCCATAAAGCTAAA+TGG | - | chr1_1:61331737-61331756 | Msa0033700:intron | 25.0% |
| !!! | AAATGGTATGGAATTTGTTA+AGG | - | chr1_1:61331754-61331773 | Msa0033700:intron | 25.0% |
| ! | AAAGTAAGGTGTATTCTTTA+AGG | - | chr1_1:61331792-61331811 | Msa0033700:intron | 25.0% |
| !! | ACTTCAATATGATTCTCTTT+TGG | - | chr1_1:61331965-61331984 | Msa0033700:intron | 25.0% |
| !! | CAACTTTTCAAAGACAATTT+AGG | - | chr1_1:61332171-61332190 | Msa0033700:intron | 25.0% |
| !!! | TTCATAGTATTTTGAAGAGT+GGG | + | chr1_1:61332533-61332552 | None:intergenic | 25.0% |
| !!! | TTTCATAGTATTTTGAAGAG+TGG | + | chr1_1:61332534-61332553 | None:intergenic | 25.0% |
| ! | CATGAATTGAGTTACTTATT+TGG | - | chr1_1:61332590-61332609 | Msa0033700:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr1_1:61333037-61333056 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr1_1:61333036-61333055 | None:intergenic | 25.0% |
| ! | TTATAAGGACTAAAAGTTGA+AGG | + | chr1_1:61332679-61332698 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr1_1:61333036-61333055 | Msa0033700:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr1_1:61333037-61333056 | Msa0033700:intron | 25.0% |
| ! | TAAACAAGAAAAGATATGGT+AGG | - | chr1_1:61333119-61333138 | Msa0033700:intron | 25.0% |
| ! | AAACAAGAAAAGATATGGTA+GGG | - | chr1_1:61333120-61333139 | Msa0033700:intron | 25.0% |
| !! | TTTTTATACAATAAGGGATC+AGG | - | chr1_1:61333180-61333199 | Msa0033700:intron | 25.0% |
| ! | AAAAAATATGACCATCATCA+CGG | - | chr1_1:61333204-61333223 | Msa0033700:CDS | 25.0% |
| ! | ACATTTAACCTTATATGAAG+GGG | - | chr1_1:61333236-61333255 | Msa0033700:CDS | 25.0% |
| ! | AAGAATTATGCTATGTTCAA+GGG | + | chr1_1:61333310-61333329 | None:intergenic | 25.0% |
| ! | AAAGAATTATGCTATGTTCA+AGG | + | chr1_1:61333311-61333330 | None:intergenic | 25.0% |
| ! | TAAACAACAGTTATAAACCT+TGG | + | chr1_1:61333358-61333377 | None:intergenic | 25.0% |
| !! | TAAGTCTTTTAATAGAAGCA+TGG | - | chr1_1:61333376-61333395 | Msa0033700:intron | 25.0% |
| ! | ATAAGCCTCATTTCATAATA+TGG | + | chr1_1:61333418-61333437 | None:intergenic | 25.0% |
| !! | TAAGTCTTTTAATAGAAGCA+TGG | - | chr1_1:61333376-61333395 | Msa0033700:intron | 25.0% |
| ! | TCTTCTGTCTATTCATAATA+TGG | + | chr1_1:61333490-61333509 | None:intergenic | 25.0% |
| !!! | CAAACTATTTTGAGTTTGAA+TGG | + | chr1_1:61333822-61333841 | None:intergenic | 25.0% |
| ! | CATTCAAACTCAAAATAGTT+TGG | - | chr1_1:61333820-61333839 | Msa0033700:intron | 25.0% |
| ! | AAGTTTGATATAGAAAATGC+GGG | - | chr1_1:61334122-61334141 | Msa0033700:CDS | 25.0% |
| !!! | ACAACACAAAAAAGCATTAT+GGG | + | chr1_1:61334232-61334251 | None:intergenic | 25.0% |
| !!! | TACAACACAAAAAAGCATTA+TGG | + | chr1_1:61334233-61334252 | None:intergenic | 25.0% |
| ! | AAATTTCATTAGTATGGAAG+TGG | - | chr1_1:61334369-61334388 | Msa0033700:intron | 25.0% |
| ! | TAAACCTTGAAATGAATTGA+GGG | + | chr1_1:61334534-61334553 | None:intergenic | 25.0% |
| !! | ATACATACTTTTGATCAACT+TGG | + | chr1_1:61334762-61334781 | None:intergenic | 25.0% |
| ! | CAAATATCCAAAGTAATGTT+AGG | - | chr1_1:61334867-61334886 | Msa0033700:intron | 25.0% |
| ! | AATGAATCCTAACATTACTT+TGG | + | chr1_1:61334877-61334896 | None:intergenic | 25.0% |
| ! | TTTCTTTAAACTTGTGATCT+CGG | - | chr1_1:61335038-61335057 | Msa0033700:intron | 25.0% |
| ! | AAGAAGCAAATTAAAATCGT+AGG | + | chr1_1:61335120-61335139 | None:intergenic | 25.0% |
| ! | GTAAGAATATTAGGAAATGA+AGG | + | chr1_1:61335456-61335475 | None:intergenic | 25.0% |
| ! | AAGGAAAAGGTAAGAATATT+AGG | + | chr1_1:61335465-61335484 | None:intergenic | 25.0% |
| ! | TTTCAACCATAATCTCAATA+TGG | - | chr1_1:61335550-61335569 | Msa0033700:intron | 25.0% |
| ! | CTTAATCACTCAAATCTAAA+TGG | + | chr1_1:61335753-61335772 | None:intergenic | 25.0% |
| ! | GGTGTAAAATAAATTTACAC+AGG | + | chr1_1:61335788-61335807 | None:intergenic | 25.0% |
| ! | ATAAATTCTCATTCGGATAT+TGG | + | chr1_1:61335809-61335828 | None:intergenic | 25.0% |
| !! | ATCAACATTTTGTATAACAC+GGG | - | chr1_1:61335855-61335874 | Msa0033700:intron | 25.0% |
| !! | GCTTAGTTTGGTAAAAATTA+GGG | - | chr1_1:61335903-61335922 | Msa0033700:intron | 25.0% |
| ! | AAAAATTAGGGAATAGTTGA+CGG | - | chr1_1:61335915-61335934 | Msa0033700:intron | 25.0% |
| !!! | TGGTTATTCTGAAATTAACT+CGG | - | chr1_1:61336261-61336280 | Msa0033700:intron | 25.0% |
| ! | AATGTGGTATCAATACAAAA+AGG | - | chr1_1:61336285-61336304 | Msa0033700:intron | 25.0% |
| ! | ATGTGGTATCAATACAAAAA+GGG | - | chr1_1:61336286-61336305 | Msa0033700:intron | 25.0% |
| ! | TCAACAGATTAGACTATAAA+GGG | + | chr1_1:61336400-61336419 | None:intergenic | 25.0% |
| ! | TTCAACAGATTAGACTATAA+AGG | + | chr1_1:61336401-61336420 | None:intergenic | 25.0% |
| ! | TAGGATATTCAAATATTGAG+AGG | - | chr1_1:61336665-61336684 | Msa0033700:intron | 25.0% |
| !! | GTTTGTTCTCTAATTTTCAT+TGG | + | chr1_1:61336701-61336720 | None:intergenic | 25.0% |
| !! | CTATTGTTGTTATGATTTGT+TGG | - | chr1_1:61336842-61336861 | Msa0033700:intron | 25.0% |
| !!! | TGTCAAGTGCATTTTATTTT+TGG | - | chr1_1:61336980-61336999 | Msa0033700:intron | 25.0% |
| !!! | TCACAAATTTGTTATGATGA+TGG | - | chr1_1:61337230-61337249 | Msa0033700:intron | 25.0% |
| !!! | CACAAATTTGTTATGATGAT+GGG | - | chr1_1:61337231-61337250 | Msa0033700:intron | 25.0% |
| !! | AATTTAACGTTGATAAACGT+TGG | - | chr1_1:61337279-61337298 | Msa0033700:intron | 25.0% |
| !!! | CTCTCTGTTTTAAATGATTT+AGG | - | chr1_1:61337445-61337464 | Msa0033700:intron | 25.0% |
| !!! | TTTATTTCTTTTACTTTCGC+AGG | - | chr1_1:61337815-61337834 | Msa0033700:intron | 25.0% |
| ! | TTATCTTGTTGCAATGTTAA+AGG | - | chr1_1:61337942-61337961 | Msa0033700:intron | 25.0% |
| ! | ATTACTCAATCTCAAAATGA+AGG | + | chr1_1:61337968-61337987 | None:intergenic | 25.0% |
| ! | AACAAAAGAACTTAGAAAGA+TGG | - | chr1_1:61338106-61338125 | Msa0033700:intron | 25.0% |
| ! | ACAAAAGAACTTAGAAAGAT+GGG | - | chr1_1:61338107-61338126 | Msa0033700:intron | 25.0% |
| !!! | TGCCAATTATTTAGAGTTTT+GGG | + | chr1_1:61338315-61338334 | None:intergenic | 25.0% |
| ! | ATAATTGGCACAAATTATGA+TGG | - | chr1_1:61338325-61338344 | Msa0033700:intron | 25.0% |
| !!! | AATTATGATGGATTGGTTTT+AGG | - | chr1_1:61338337-61338356 | Msa0033700:intron | 25.0% |
| ! | GACTTTGAATTACTTGATTT+GGG | - | chr1_1:61338433-61338452 | Msa0033700:intron | 25.0% |
| ! | ATTCAAACAAAATCAACCTA+TGG | + | chr1_1:61338851-61338870 | None:intergenic | 25.0% |
| ! | AAGATTTCAAATTCTTGGAA+GGG | + | chr1_1:61339160-61339179 | None:intergenic | 25.0% |
| ! | ATTGGGACTAGATATTAATT+AGG | + | chr1_1:61339190-61339209 | None:intergenic | 25.0% |
| !!! | ATCGTTTGCTTTAAAAAACA+TGG | + | chr1_1:61339469-61339488 | None:intergenic | 25.0% |
| ! | TTCATATTCTATTTAACTGC+AGG | - | chr1_1:61339499-61339518 | Msa0033700:intron | 25.0% |
| ! | TACTGAAAGTTAATTTCTTC+AGG | - | chr1_1:61339610-61339629 | Msa0033700:intron | 25.0% |
| ! | CTAATTTGGATTTCTTTATC+GGG | - | chr1_1:61339751-61339770 | Msa0033700:intron | 25.0% |
| ! | AACTGAATTTATTTACAACC+AGG | + | chr1_1:61339794-61339813 | None:intergenic | 25.0% |
| ! | ATGAAATGACTCTTGAATTA+AGG | + | chr1_1:61340351-61340370 | None:intergenic | 25.0% |
| ! | TTAATTCAAGAGTCATTTCA+TGG | - | chr1_1:61340350-61340369 | Msa0033700:intron | 25.0% |
| ! | CATTATGTGAATACATAGAT+CGG | + | chr1_1:61340432-61340451 | None:intergenic | 25.0% |
| ! | TTTGTGTTAAAACAATGCAT+TGG | - | chr1_1:61340502-61340521 | Msa0033700:intron | 25.0% |
| ! | CAAGTTATACAGTGAAAAAA+TGG | - | chr1_1:61341180-61341199 | Msa0033700:intron | 25.0% |
| ! | GCTGAATGAAGAAATAAAAA+AGG | - | chr1_1:61341330-61341349 | Msa0033700:intron | 25.0% |
| !!! | TTGATGGTTTTAGTTAAGTA+TGG | - | chr1_1:61341476-61341495 | Msa0033700:CDS | 25.0% |
| ! | TCAACAAGATGACTATATAA+AGG | + | chr1_1:61341507-61341526 | None:intergenic | 25.0% |
| ! | TTATATAGTCATCTTGTTGA+TGG | - | chr1_1:61341507-61341526 | Msa0033700:CDS | 25.0% |
| !! | TTCATATCCATTTTACTTCA+TGG | + | chr1_1:61341853-61341872 | None:intergenic | 25.0% |
| ! | ATATGAATTATGCAGATGTT+AGG | - | chr1_1:61341866-61341885 | Msa0033700:intron | 25.0% |
| ! | TATGAATTATGCAGATGTTA+GGG | - | chr1_1:61341867-61341886 | Msa0033700:intron | 25.0% |
| ! | TTATAAAGGAATACAACCAA+AGG | - | chr1_1:61341906-61341925 | Msa0033700:intron | 25.0% |
| !! | ATGGATCCTGTTTATATTTT+TGG | - | chr1_1:61342015-61342034 | Msa0033700:intron | 25.0% |
| ! | AAGCATGAACATGAATAATT+TGG | + | chr1_1:61342172-61342191 | None:intergenic | 25.0% |
| ! | TAACTACTCGTTATATATTC+AGG | - | chr1_1:61342357-61342376 | Msa0033700:intron | 25.0% |
| ! | AACTACTCGTTATATATTCA+GGG | - | chr1_1:61342358-61342377 | Msa0033700:intron | 25.0% |
| ! | AAGCATGGATAAGTTAATTA+GGG | + | chr1_1:61342401-61342420 | None:intergenic | 25.0% |
| ! | TAAGCATGGATAAGTTAATT+AGG | + | chr1_1:61342402-61342421 | None:intergenic | 25.0% |
| ! | TGTCAGTGTTTATTATCTAT+TGG | - | chr1_1:61342485-61342504 | Msa0033700:intron | 25.0% |
| ! | TTCTTATTGCTTCTGTATAA+AGG | + | chr1_1:61342550-61342569 | None:intergenic | 25.0% |
| ! | AATCTATGATGTTGTATATG+AGG | - | chr1_1:61342597-61342616 | Msa0033700:intron | 25.0% |
| ! | ATCTATGATGTTGTATATGA+GGG | - | chr1_1:61342598-61342617 | Msa0033700:intron | 25.0% |
| ! | GTGAAAATTAAAGCAATCAA+TGG | - | chr1_1:61342727-61342746 | Msa0033700:intron | 25.0% |
| !!! | TGGTTATTTTGTTTTGTTCA+TGG | + | chr1_1:61342777-61342796 | None:intergenic | 25.0% |
| ! | ATCTTATGATATCCAATGTT+TGG | + | chr1_1:61342797-61342816 | None:intergenic | 25.0% |
| TCCAAAATAAAAATCACGTG+CGG | - | chr1_1:61329072-61329091 | Msa0033700:three_prime_UTR | 30.0% | |
| TAAACCGCATATATTTGGAT+CGG | + | chr1_1:61329142-61329161 | None:intergenic | 30.0% | |
| !! | ATATGCGGTTTAATTTGGAT+CGG | - | chr1_1:61329150-61329169 | Msa0033700:three_prime_UTR | 30.0% |
| !!! | GTTTAATTTGGATCGGTTTT+TGG | - | chr1_1:61329157-61329176 | Msa0033700:three_prime_UTR | 30.0% |
| !! | ACAAATTTACTTTTGCGGTT+CGG | - | chr1_1:61329434-61329453 | Msa0033700:intron | 30.0% |
| CAAGCACATCCAAAAATATT+CGG | - | chr1_1:61329530-61329549 | Msa0033700:intron | 30.0% | |
| ! | CGCAAAAAACCGAATATTTT+TGG | + | chr1_1:61329542-61329561 | None:intergenic | 30.0% |
| !!! | GGTTTTATTTTGGATCAGTT+TGG | - | chr1_1:61329589-61329608 | Msa0033700:intron | 30.0% |
| !! | TTTTCTAGCAGCTATTCTAA+TGG | + | chr1_1:61329652-61329671 | None:intergenic | 30.0% |
| ATTAGAATAGCTGCTAGAAA+AGG | - | chr1_1:61329651-61329670 | Msa0033700:CDS | 30.0% | |
| TATATTTCTTCCTTTCAGAC+TGG | - | chr1_1:61329720-61329739 | Msa0033700:CDS | 30.0% | |
| ATCACACACACAGAAATATA+AGG | + | chr1_1:61329809-61329828 | None:intergenic | 30.0% | |
| TGCAAAATAGACGTTTACAA+GGG | - | chr1_1:61329832-61329851 | Msa0033700:CDS | 30.0% | |
| TGCAAAATAGACATCTACAA+GGG | - | chr1_1:61330072-61330091 | Msa0033700:CDS | 30.0% | |
| ! | TGGAGGTTAACCAAATTTTA+TGG | + | chr1_1:61330431-61330450 | None:intergenic | 30.0% |
| ! | TCTTTTGATAGAATTGGTAG+GGG | + | chr1_1:61330549-61330568 | None:intergenic | 30.0% |
| ! | CTCTTTTGATAGAATTGGTA+GGG | + | chr1_1:61330550-61330569 | None:intergenic | 30.0% |
| ! | TCTCTTTTGATAGAATTGGT+AGG | + | chr1_1:61330551-61330570 | None:intergenic | 30.0% |
| !!! | GTCTTTTGATTTATTTGACC+GGG | - | chr1_1:61330647-61330666 | Msa0033700:CDS | 30.0% |
| !!! | TCTTTTGATTTATTTGACCG+GGG | - | chr1_1:61330648-61330667 | Msa0033700:CDS | 30.0% |
| ATTCTCTAAATACTCCTCTT+CGG | + | chr1_1:61330732-61330751 | None:intergenic | 30.0% | |
| !! | GAGGAGTATTTAGAGAATAA+TGG | - | chr1_1:61330734-61330753 | Msa0033700:intron | 30.0% |
| GAGTATTTAGAGAATAATGG+AGG | - | chr1_1:61330737-61330756 | Msa0033700:intron | 30.0% | |
| TTGTCAGATTCAAACATTGA+AGG | + | chr1_1:61330780-61330799 | None:intergenic | 30.0% | |
| TAGAAACAAAGTGATGCATA+CGG | - | chr1_1:61330961-61330980 | Msa0033700:intron | 30.0% | |
| ! | GAATCGGATAAATTTCTAGA+AGG | - | chr1_1:61330983-61331002 | Msa0033700:intron | 30.0% |
| AGGACAATTATAGAGTTTGT+TGG | - | chr1_1:61331019-61331038 | Msa0033700:intron | 30.0% | |
| ! | GGACAATTATAGAGTTTGTT+GGG | - | chr1_1:61331020-61331039 | Msa0033700:intron | 30.0% |
| TTTATATGAGAAACACATCC+GGG | - | chr1_1:61331350-61331369 | Msa0033700:intron | 30.0% | |
| !! | TTCCATACCATTTAGCTTTA+TGG | + | chr1_1:61331747-61331766 | None:intergenic | 30.0% |
| TCATGATGTGTTACAAAGTA+AGG | - | chr1_1:61331778-61331797 | Msa0033700:intron | 30.0% | |
| !! | GGTAAATTCTAAGTTGCTTT+TGG | - | chr1_1:61331986-61332005 | Msa0033700:intron | 30.0% |
| !!! | AAGTTGCTTTTGGACAATTT+TGG | - | chr1_1:61331996-61332015 | Msa0033700:intron | 30.0% |
| !! | GCTCTAAAGTGAAAAAAAGA+AGG | + | chr1_1:61332202-61332221 | None:intergenic | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr1_1:61333023-61333042 | Msa0033700:intron | 30.0% | |
| ! | AGTAGGGCTAAATATGTTTT+TGG | + | chr1_1:61333095-61333114 | None:intergenic | 30.0% |
| ! | TTTGTGACATATGTTGATTG+AGG | - | chr1_1:61333278-61333297 | Msa0033700:intron | 30.0% |
| TTAGACCAAGAAAACAATGT+TGG | - | chr1_1:61333329-61333348 | Msa0033700:intron | 30.0% | |
| ! | TAATGCAAAGTTGCTCATTT+TGG | - | chr1_1:61333655-61333674 | Msa0033700:intron | 30.0% |
| !! | GATTTAAGTTGATTCAAGTC+TGG | - | chr1_1:61333779-61333798 | Msa0033700:intron | 30.0% |
| !! | TTGAATGGGTTGATTTAAGT+TGG | + | chr1_1:61333807-61333826 | None:intergenic | 30.0% |
| CACACCAATTAAGATTGATT+AGG | - | chr1_1:61334268-61334287 | Msa0033700:CDS | 30.0% | |
| CCAATTAAGATTGATTAGGT+CGG | - | chr1_1:61334272-61334291 | Msa0033700:CDS | 30.0% | |
| CAATTAAGATTGATTAGGTC+GGG | - | chr1_1:61334273-61334292 | Msa0033700:CDS | 30.0% | |
| ATTAGGTCGGGTAATATATT+TGG | - | chr1_1:61334285-61334304 | Msa0033700:intron | 30.0% | |
| CTTGGCAAATTTCATTAGTA+TGG | - | chr1_1:61334363-61334382 | Msa0033700:intron | 30.0% | |
| AAACCTTGAAATGAATTGAG+GGG | + | chr1_1:61334533-61334552 | None:intergenic | 30.0% | |
| CTAAACCTTGAAATGAATTG+AGG | + | chr1_1:61334535-61334554 | None:intergenic | 30.0% | |
| TCATACTAACTTCTTCTACT+AGG | + | chr1_1:61335071-61335090 | None:intergenic | 30.0% | |
| TCTTCGATGCTAATTTGAAT+GGG | + | chr1_1:61335217-61335236 | None:intergenic | 30.0% | |
| CATAATAACCCACTTAAGTT+TGG | + | chr1_1:61335301-61335320 | None:intergenic | 30.0% | |
| ATGCAAGAAAAACTTGATGA+TGG | + | chr1_1:61335708-61335727 | None:intergenic | 30.0% | |
| TGGCATAAAATGATAAGTAG+TGG | + | chr1_1:61335733-61335752 | None:intergenic | 30.0% | |
| ! | ATTTTTACCAAACTAAGCCA+TGG | + | chr1_1:61335901-61335920 | None:intergenic | 30.0% |
| ! | GGCTTAGTTTGGTAAAAATT+AGG | - | chr1_1:61335902-61335921 | Msa0033700:intron | 30.0% |
| !!! | TTGGTCACAATTTTTTCTCA+CGG | + | chr1_1:61336094-61336113 | None:intergenic | 30.0% |
| ! | GTGACCAAACATTTCTATTT+TGG | - | chr1_1:61336106-61336125 | Msa0033700:intron | 30.0% |
| ACGACCAAAATAGAAATGTT+TGG | + | chr1_1:61336113-61336132 | None:intergenic | 30.0% | |
| ! | ACAAAATTTTGAGCTGCTAA+TGG | + | chr1_1:61336153-61336172 | None:intergenic | 30.0% |
| AGAATAACCATATTGCAAAG+AGG | + | chr1_1:61336251-61336270 | None:intergenic | 30.0% | |
| CTATACATACTTGGATTTGT+TGG | - | chr1_1:61336364-61336383 | Msa0033700:intron | 30.0% | |
| ATAGACTTAAATATGGTCAC+AGG | - | chr1_1:61336444-61336463 | Msa0033700:intron | 30.0% | |
| TTAAGATGACAATGTTACCA+TGG | - | chr1_1:61336534-61336553 | Msa0033700:intron | 30.0% | |
| CTAAAGAATAGTAGACTAGA+AGG | - | chr1_1:61336640-61336659 | Msa0033700:intron | 30.0% | |
| AATAGTAGACTAGAAGGAAT+AGG | - | chr1_1:61336646-61336665 | Msa0033700:intron | 30.0% | |
| ! | TACCAAACTATTGATTGAGT+TGG | + | chr1_1:61336811-61336830 | None:intergenic | 30.0% |
| ! | GACAACAAACTTTAGAAACT+CGG | + | chr1_1:61336964-61336983 | None:intergenic | 30.0% |
| AAACTGTACAAAACAGAAAC+AGG | + | chr1_1:61337038-61337057 | None:intergenic | 30.0% | |
| ! | CATGCATTGTCTATAACTTT+TGG | - | chr1_1:61337182-61337201 | Msa0033700:intron | 30.0% |
| ! | ATACACTCAACATGCATTTT+AGG | - | chr1_1:61337417-61337436 | Msa0033700:intron | 30.0% |
| ! | TACACTCAACATGCATTTTA+GGG | - | chr1_1:61337418-61337437 | Msa0033700:intron | 30.0% |
| !!! | TTTTTGTTAGGATTTGGTGT+TGG | - | chr1_1:61337483-61337502 | Msa0033700:intron | 30.0% |
| !!! | TTTTGTTAGGATTTGGTGTT+GGG | - | chr1_1:61337484-61337503 | Msa0033700:intron | 30.0% |
| !!! | ATCTTTTGGTTCATATCTTC+AGG | - | chr1_1:61337609-61337628 | Msa0033700:intron | 30.0% |
| !!! | TCTTTTGGTTCATATCTTCA+GGG | - | chr1_1:61337610-61337629 | Msa0033700:intron | 30.0% |
| CCATTGATATCTAACTCTAT+AGG | + | chr1_1:61337654-61337673 | None:intergenic | 30.0% | |
| CCTATAGAGTTAGATATCAA+TGG | - | chr1_1:61337651-61337670 | Msa0033700:intron | 30.0% | |
| GTAATTTACCTTGATACAGA+AGG | - | chr1_1:61337687-61337706 | Msa0033700:intron | 30.0% | |
| TTTCAAATCCTTCTGTATCA+AGG | + | chr1_1:61337698-61337717 | None:intergenic | 30.0% | |
| AGTCCAATGTATATGATGAT+CGG | - | chr1_1:61337727-61337746 | Msa0033700:intron | 30.0% | |
| TTACCGATCATCATATACAT+TGG | + | chr1_1:61337733-61337752 | None:intergenic | 30.0% | |
| GTTCTTTGTTGAATCATGTA+TGG | - | chr1_1:61337777-61337796 | Msa0033700:intron | 30.0% | |
| !! | ATCATGTATGGTTTTTCAGT+TGG | - | chr1_1:61337789-61337808 | Msa0033700:intron | 30.0% |
| GCAATGAACATGAAAATTAG+GGG | + | chr1_1:61337916-61337935 | None:intergenic | 30.0% | |
| GGCAATGAACATGAAAATTA+GGG | + | chr1_1:61337917-61337936 | None:intergenic | 30.0% | |
| ! | CTAATTTTCATGTTCATTGC+CGG | - | chr1_1:61337916-61337935 | Msa0033700:intron | 30.0% |
| TTCATATGGCATGTATACAT+TGG | - | chr1_1:61338043-61338062 | Msa0033700:intron | 30.0% | |
| TATATGTAGTCCATGATATG+CGG | - | chr1_1:61338175-61338194 | Msa0033700:intron | 30.0% | |
| GTCCCAAAACTCTAAATAAT+TGG | - | chr1_1:61338310-61338329 | Msa0033700:intron | 30.0% | |
| !! | GTGCCAATTATTTAGAGTTT+TGG | + | chr1_1:61338316-61338335 | None:intergenic | 30.0% |
| CGACTTTGAATTACTTGATT+TGG | - | chr1_1:61338432-61338451 | Msa0033700:intron | 30.0% | |
| ! | CAGATGAAAACATTTGAGAT+TGG | + | chr1_1:61338502-61338521 | None:intergenic | 30.0% |
| ! | TATTTTGTAGGGAAATGATG+TGG | - | chr1_1:61338878-61338897 | Msa0033700:intron | 30.0% |
| TAATGAAGACTAAAGAATCC+CGG | + | chr1_1:61339034-61339053 | None:intergenic | 30.0% | |
| CATTGATCGAGACATTTAAA+GGG | + | chr1_1:61339063-61339082 | None:intergenic | 30.0% | |
| TCATTGATCGAGACATTTAA+AGG | + | chr1_1:61339064-61339083 | None:intergenic | 30.0% | |
| CTCGATCAATGATGATTTAT+AGG | - | chr1_1:61339072-61339091 | Msa0033700:intron | 30.0% | |
| CAATATTCAATAAGTTGCAG+TGG | + | chr1_1:61339098-61339117 | None:intergenic | 30.0% | |
| ! | TACCGAAATTTGAGAGTTTT+GGG | - | chr1_1:61339129-61339148 | Msa0033700:intron | 30.0% |
| CAAGATTTCAAATTCTTGGA+AGG | + | chr1_1:61339161-61339180 | None:intergenic | 30.0% | |
| ! | CTTCCAAGAATTTGAAATCT+TGG | - | chr1_1:61339159-61339178 | Msa0033700:intron | 30.0% |
| AGACCAAGATTTCAAATTCT+TGG | + | chr1_1:61339165-61339184 | None:intergenic | 30.0% | |
| AAGTCAGCATGCAATTAATT+GGG | + | chr1_1:61339207-61339226 | None:intergenic | 30.0% | |
| AAAGTCAGCATGCAATTAAT+TGG | + | chr1_1:61339208-61339227 | None:intergenic | 30.0% | |
| ATTAGGCAACAGTTACTATT+AGG | + | chr1_1:61339262-61339281 | None:intergenic | 30.0% | |
| TATCAGTCGTTATTATGTTG+CGG | + | chr1_1:61339295-61339314 | None:intergenic | 30.0% | |
| TTATCTTAATCGTCTACAGA+AGG | - | chr1_1:61339332-61339351 | Msa0033700:intron | 30.0% | |
| TATCTTAATCGTCTACAGAA+GGG | - | chr1_1:61339333-61339352 | Msa0033700:intron | 30.0% | |
| !!! | TTTTAAAGCAAACGATCTGA+AGG | - | chr1_1:61339473-61339492 | Msa0033700:intron | 30.0% |
| ! | AGGAGACAAAAATATTGACT+TGG | - | chr1_1:61339519-61339538 | Msa0033700:intron | 30.0% |
| AGCAAAAGTTCACTGATAAT+TGG | + | chr1_1:61339570-61339589 | None:intergenic | 30.0% | |
| !!! | AGAAGTCTTTTGACTTCTTT+AGG | - | chr1_1:61339954-61339973 | Msa0033700:intron | 30.0% |
| ACACATGTCTTACAATATGA+AGG | + | chr1_1:61340121-61340140 | None:intergenic | 30.0% | |
| AGAGTTAAGCAATAAACAAC+AGG | + | chr1_1:61340184-61340203 | None:intergenic | 30.0% | |
| ATTTGAGAAATACTGTTGAC+AGG | - | chr1_1:61340206-61340225 | Msa0033700:intron | 30.0% | |
| !! | TCAAAGATTTGAGTTGAACA+AGG | + | chr1_1:61340270-61340289 | None:intergenic | 30.0% |
| ! | AATCTTTGGAGAGATTATAC+TGG | + | chr1_1:61340652-61340671 | None:intergenic | 30.0% |
| TACAAGGGAAGACTTTAAAT+GGG | - | chr1_1:61340673-61340692 | Msa0033700:intron | 30.0% | |
| ! | AATTTTATAAAGGTCCTCTG+AGG | + | chr1_1:61340778-61340797 | None:intergenic | 30.0% |
| CAGAGGACCTTTATAAAATT+CGG | - | chr1_1:61340778-61340797 | Msa0033700:intron | 30.0% | |
| ! | CTTCATTTCTAGACCTATTA+TGG | + | chr1_1:61341249-61341268 | None:intergenic | 30.0% |
| TCAAACTCCATGAAGTAAAA+TGG | - | chr1_1:61341843-61341862 | Msa0033700:intron | 30.0% | |
| GTCTAGGTCTCAATTTATAA+AGG | - | chr1_1:61341892-61341911 | Msa0033700:intron | 30.0% | |
| !! | TTTTGATTGAAATTGGAGCA+TGG | - | chr1_1:61341996-61342015 | Msa0033700:intron | 30.0% |
| AGGTCTCCAAAAATATAAAC+AGG | + | chr1_1:61342024-61342043 | None:intergenic | 30.0% | |
| CACTTTACTATAATTCAGCT+TGG | - | chr1_1:61342071-61342090 | Msa0033700:intron | 30.0% | |
| TAAAATAGTCTTCGACTCTT+TGG | - | chr1_1:61342194-61342213 | Msa0033700:intron | 30.0% | |
| !!! | TCAGAGACTATTTTGACTAA+CGG | + | chr1_1:61342241-61342260 | None:intergenic | 30.0% |
| !! | TTTTTGGTGATTGAAACAGA+TGG | - | chr1_1:61342440-61342459 | Msa0033700:intron | 30.0% |
| !! | TTTTGGTGATTGAAACAGAT+GGG | - | chr1_1:61342441-61342460 | Msa0033700:intron | 30.0% |
| CAGTGTTTATTATCTATTGG+TGG | - | chr1_1:61342488-61342507 | Msa0033700:intron | 30.0% | |
| ATTATCTATTGGTGGAGTTA+TGG | - | chr1_1:61342496-61342515 | Msa0033700:intron | 30.0% | |
| TTATCTATTGGTGGAGTTAT+GGG | - | chr1_1:61342497-61342516 | Msa0033700:intron | 30.0% | |
| !! | GTATATGAGGGTATTATCTA+AGG | - | chr1_1:61342610-61342629 | Msa0033700:intron | 30.0% |
| !! | ACCGCACGTGATTTTTATTT+TGG | + | chr1_1:61329076-61329095 | None:intergenic | 35.0% |
| TTTGGAAAAACCGCTATGAT+CGG | + | chr1_1:61329502-61329521 | None:intergenic | 35.0% | |
| !!! | CGAATATTTTTGGATGTGCT+TGG | + | chr1_1:61329532-61329551 | None:intergenic | 35.0% |
| !!! | ATTCGGTTTTTTGCGGTTTT+CGG | - | chr1_1:61329547-61329566 | Msa0033700:intron | 35.0% |
| ! | TTTGCGGTTTTCGGTTTTTT+TGG | - | chr1_1:61329556-61329575 | Msa0033700:intron | 35.0% |
| !!! | GGTTTTCGGTTTTTTTGGAT+CGG | - | chr1_1:61329561-61329580 | Msa0033700:intron | 35.0% |
| !!! | ATCGGTTTGCGGTTTTATTT+TGG | - | chr1_1:61329579-61329598 | Msa0033700:intron | 35.0% |
| CTGCAAAATAGACGTTTACA+AGG | - | chr1_1:61329831-61329850 | Msa0033700:CDS | 35.0% | |
| TAAGTGAATATGCTTCTCCA+TGG | + | chr1_1:61329871-61329890 | None:intergenic | 35.0% | |
| GATATTTCTTCCTTTCAGAC+TGG | - | chr1_1:61329960-61329979 | Msa0033700:intron | 35.0% | |
| ATCACACACCCAGAAATATA+AGG | + | chr1_1:61330049-61330068 | None:intergenic | 35.0% | |
| CTGCAAAATAGACATCTACA+AGG | - | chr1_1:61330071-61330090 | Msa0033700:CDS | 35.0% | |
| GGACTTTAGTGACATTCTTT+CGG | + | chr1_1:61330333-61330352 | None:intergenic | 35.0% | |
| TCAAGATTCCAAGAATCCTA+CGG | - | chr1_1:61330387-61330406 | Msa0033700:intron | 35.0% | |
| ! | AACCAAATTTTATGGCATGC+CGG | + | chr1_1:61330423-61330442 | None:intergenic | 35.0% |
| ! | TTTTGATAGAATTGGTAGGG+GGG | + | chr1_1:61330547-61330566 | None:intergenic | 35.0% |
| ! | CTTTTGATAGAATTGGTAGG+GGG | + | chr1_1:61330548-61330567 | None:intergenic | 35.0% |
| CTAATCTTAAATACCTACCC+CGG | + | chr1_1:61330668-61330687 | None:intergenic | 35.0% | |
| GTGAAGTCAATCCGAAAAAT+CGG | + | chr1_1:61330877-61330896 | None:intergenic | 35.0% | |
| GGAACCATGCATTATACTTT+CGG | - | chr1_1:61331075-61331094 | Msa0033700:CDS | 35.0% | |
| ! | CTTTCCGAAAGTATAATGCA+TGG | + | chr1_1:61331082-61331101 | None:intergenic | 35.0% |
| CATGCATTATACTTTCGGAA+AGG | - | chr1_1:61331080-61331099 | Msa0033700:CDS | 35.0% | |
| ACTGAAAAATACAGCCAGAT+GGG | + | chr1_1:61331129-61331148 | None:intergenic | 35.0% | |
| AACTGAAAAATACAGCCAGA+TGG | + | chr1_1:61331130-61331149 | None:intergenic | 35.0% | |
| !! | ATCTGGCTGTATTTTTCAGT+TGG | - | chr1_1:61331129-61331148 | Msa0033700:CDS | 35.0% |
| ! | AACATCGCATGTTTTTCATG+AGG | - | chr1_1:61331641-61331660 | Msa0033700:intron | 35.0% |
| AGCCATAAAGCTAAATGGTA+TGG | - | chr1_1:61331742-61331761 | Msa0033700:intron | 35.0% | |
| ! | AGTTGGTTCACCGTTTATAA+AGG | - | chr1_1:61331895-61331914 | Msa0033700:intron | 35.0% |
| !! | GGACAATTTTGGTAAGTTGT+CGG | - | chr1_1:61332007-61332026 | Msa0033700:intron | 35.0% |
| !! | TGACTGATTTTAATCGGTTG+TGG | - | chr1_1:61332136-61332155 | Msa0033700:intron | 35.0% |
| !! | GACTGATTTTAATCGGTTGT+GGG | - | chr1_1:61332137-61332156 | Msa0033700:intron | 35.0% |
| GAGGGACTAAAATGAAAAGT+TGG | - | chr1_1:61333055-61333074 | Msa0033700:intron | 35.0% | |
| GAGTAATAGCCGTGTAATTA+GGG | - | chr1_1:61333144-61333163 | Msa0033700:intron | 35.0% | |
| ! | GGTAACCAACATTGTTTTCT+TGG | + | chr1_1:61333337-61333356 | None:intergenic | 35.0% |
| ! | GAAAACAATGTTGGTTACCA+AGG | - | chr1_1:61333338-61333357 | Msa0033700:intron | 35.0% |
| CATGTCAACTTGTGTCTTAA+GGG | + | chr1_1:61333696-61333715 | None:intergenic | 35.0% | |
| TCATGTCAACTTGTGTCTTA+AGG | + | chr1_1:61333697-61333716 | None:intergenic | 35.0% | |
| AAGCCTAATTGGTATAGGTT+GGG | + | chr1_1:61334155-61334174 | None:intergenic | 35.0% | |
| TGATCAAGCCTAATTGGTAT+AGG | + | chr1_1:61334160-61334179 | None:intergenic | 35.0% | |
| TATACCAATTAGGCTTGATC+AGG | - | chr1_1:61334159-61334178 | Msa0033700:intron | 35.0% | |
| !! | AAAAGCATTATGGGTGTTCA+CGG | + | chr1_1:61334223-61334242 | None:intergenic | 35.0% |
| CCGACCTAATCAATCTTAAT+TGG | + | chr1_1:61334275-61334294 | None:intergenic | 35.0% | |
| TGCATCAACAACATCAATAG+TGG | - | chr1_1:61334392-61334411 | Msa0033700:intron | 35.0% | |
| ! | TTTGTTATCACACGCCAAAT+TGG | - | chr1_1:61334568-61334587 | Msa0033700:intron | 35.0% |
| TGAAGATATGAGCTCCAATT+TGG | + | chr1_1:61334585-61334604 | None:intergenic | 35.0% | |
| GAAAGGATTGAATTCAAGCA+AGG | - | chr1_1:61334707-61334726 | Msa0033700:CDS | 35.0% | |
| CTCTTCGATGCTAATTTGAA+TGG | + | chr1_1:61335218-61335237 | None:intergenic | 35.0% | |
| !!! | AGACGTTAGTTTTGTGCTTT+TGG | + | chr1_1:61335362-61335381 | None:intergenic | 35.0% |
| GTGTAAGTTAAGAATCATGG+TGG | + | chr1_1:61335418-61335437 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAGAAGGAAA+AGG | + | chr1_1:61335478-61335497 | None:intergenic | 35.0% | |
| TGATGAAGAAGAAGAAGAGA+AGG | + | chr1_1:61335484-61335503 | None:intergenic | 35.0% | |
| AAATTGTGGATGGAAAAGGA+AGG | + | chr1_1:61335614-61335633 | None:intergenic | 35.0% | |
| TAAAACACCATGGCTTAGTT+TGG | - | chr1_1:61335891-61335910 | Msa0033700:intron | 35.0% | |
| !!! | TGGTCACAATTTTTTCTCAC+GGG | + | chr1_1:61336093-61336112 | None:intergenic | 35.0% |
| CAGATGTTCGGTAACAATAT+AGG | + | chr1_1:61336190-61336209 | None:intergenic | 35.0% | |
| ACCATATTGCAAAGAGGAAA+GGG | + | chr1_1:61336245-61336264 | None:intergenic | 35.0% | |
| AACCATATTGCAAAGAGGAA+AGG | + | chr1_1:61336246-61336265 | None:intergenic | 35.0% | |
| CTGAAATTAACTCGGTAATG+TGG | - | chr1_1:61336269-61336288 | Msa0033700:intron | 35.0% | |
| TGGTATCAATACAAAAAGGG+TGG | - | chr1_1:61336289-61336308 | Msa0033700:intron | 35.0% | |
| !! | GCTAACTTGCTATACATACT+TGG | - | chr1_1:61336355-61336374 | Msa0033700:intron | 35.0% |
| ACTCACTTCAAAATGTTGTG+TGG | + | chr1_1:61336477-61336496 | None:intergenic | 35.0% | |
| CACATGTTGACACTAGAATT+AGG | + | chr1_1:61336761-61336780 | None:intergenic | 35.0% | |
| !! | TTATGATTTGTTGGCGTAGT+TGG | - | chr1_1:61336851-61336870 | Msa0033700:intron | 35.0% |
| !! | CGTTGATAAACGTTGGTTTA+TGG | - | chr1_1:61337286-61337305 | Msa0033700:intron | 35.0% |
| !! | GGTTTATGGTTGTTTCTATC+AGG | - | chr1_1:61337300-61337319 | Msa0033700:intron | 35.0% |
| !! | GTTGTTTCTATCAGGTGATT+GGG | - | chr1_1:61337308-61337327 | Msa0033700:intron | 35.0% |
| ! | AAAGATTTTCCAGATCGATG+CGG | + | chr1_1:61337334-61337353 | None:intergenic | 35.0% |
| ! | CTCTCTCTTTCTTGTTATGA+AGG | - | chr1_1:61337370-61337389 | Msa0033700:intron | 35.0% |
| GACAAAAGGTGGATGAAAAT+TGG | - | chr1_1:61337524-61337543 | Msa0033700:intron | 35.0% | |
| GTTCATATCTTCAGGGATAT+GGG | - | chr1_1:61337617-61337636 | Msa0033700:intron | 35.0% | |
| ! | ACAGAAGGATTTGAAAGTGT+TGG | - | chr1_1:61337702-61337721 | Msa0033700:intron | 35.0% |
| !! | CAGAAGGATTTGAAAGTGTT+GGG | - | chr1_1:61337703-61337722 | Msa0033700:intron | 35.0% |
| ACACAGAATGCATGATTCTT+CGG | + | chr1_1:61337759-61337778 | None:intergenic | 35.0% | |
| ! | TGTATATAACTTGCCTGAGA+CGG | - | chr1_1:61337873-61337892 | Msa0033700:intron | 35.0% |
| ATGAACATGAAAATTAGGGG+AGG | + | chr1_1:61337913-61337932 | None:intergenic | 35.0% | |
| CGGCAATGAACATGAAAATT+AGG | + | chr1_1:61337918-61337937 | None:intergenic | 35.0% | |
| CATTGCAACAAGATAAACAC+CGG | + | chr1_1:61337938-61337957 | None:intergenic | 35.0% | |
| !! | TGTTGGTTTCTGACTTCATA+TGG | - | chr1_1:61338029-61338048 | Msa0033700:intron | 35.0% |
| ! | TTAGTTGTTGTTAGGGTGAT+AGG | - | chr1_1:61338200-61338219 | Msa0033700:intron | 35.0% |
| TTACTCGAATTTCCAATCAC+CGG | - | chr1_1:61338236-61338255 | Msa0033700:intron | 35.0% | |
| !! | TGGCACAAATTATGATGGAT+TGG | - | chr1_1:61338330-61338349 | Msa0033700:intron | 35.0% |
| AAATACACCTGAGCACAAAT+TGG | - | chr1_1:61338364-61338383 | Msa0033700:intron | 35.0% | |
| AAGAAAACCAATTTGTGCTC+AGG | + | chr1_1:61338374-61338393 | None:intergenic | 35.0% | |
| !!! | GAGCTTGCTGAAGAATTTTA+CGG | - | chr1_1:61338567-61338586 | Msa0033700:intron | 35.0% |
| !!! | AGCTTGCTGAAGAATTTTAC+GGG | - | chr1_1:61338568-61338587 | Msa0033700:intron | 35.0% |
| ! | TTGTGAAACCTCTTCCTTTT+AGG | - | chr1_1:61338666-61338685 | Msa0033700:intron | 35.0% |
| ! | TGTGAAACCTCTTCCTTTTA+GGG | - | chr1_1:61338667-61338686 | Msa0033700:intron | 35.0% |
| !! | TTCCTTTTAGGGATACACAA+TGG | - | chr1_1:61338678-61338697 | Msa0033700:intron | 35.0% |
| AACCATTGTGTATCCCTAAA+AGG | + | chr1_1:61338683-61338702 | None:intergenic | 35.0% | |
| GATCAATGGAGACAATATTC+AGG | + | chr1_1:61338782-61338801 | None:intergenic | 35.0% | |
| AACGTAAAATTGTCGTCCAT+AGG | - | chr1_1:61338832-61338851 | Msa0033700:intron | 35.0% | |
| AATGAAGACTAAAGAATCCC+GGG | + | chr1_1:61339033-61339052 | None:intergenic | 35.0% | |
| ! | GTACCGAAATTTGAGAGTTT+TGG | - | chr1_1:61339128-61339147 | Msa0033700:intron | 35.0% |
| GACCCAAAACTCTCAAATTT+CGG | + | chr1_1:61339134-61339153 | None:intergenic | 35.0% | |
| GTTGCGGTTACTATGTTATT+AGG | + | chr1_1:61339279-61339298 | None:intergenic | 35.0% | |
| !!! | TCAGTGAACTTTTGCTATTC+TGG | - | chr1_1:61339574-61339593 | Msa0033700:intron | 35.0% |
| ! | TTCTTCAGGTTAATCAGATC+CGG | - | chr1_1:61339624-61339643 | Msa0033700:intron | 35.0% |
| ACATACCTGTGGTAAACTAA+AGG | + | chr1_1:61339684-61339703 | None:intergenic | 35.0% | |
| TTATCGGGAATTCTGTTATG+TGG | - | chr1_1:61339766-61339785 | Msa0033700:intron | 35.0% | |
| AAAACCACCAAGGAAACATA+TGG | + | chr1_1:61339917-61339936 | None:intergenic | 35.0% | |
| TCAAAAGACTTCTGCTATGA+CGG | + | chr1_1:61339947-61339966 | None:intergenic | 35.0% | |
| !!! | AGTCTTTTGACTTCTTTAGG+AGG | - | chr1_1:61339957-61339976 | Msa0033700:intron | 35.0% |
| GTAAGACATGTGTCCTAATT+TGG | - | chr1_1:61340128-61340147 | Msa0033700:intron | 35.0% | |
| AAAAGGTTCTGTGCCAAATT+AGG | + | chr1_1:61340144-61340163 | None:intergenic | 35.0% | |
| GAAATACTGTTGACAGGTTA+AGG | - | chr1_1:61340212-61340231 | Msa0033700:intron | 35.0% | |
| ACACCTTTAATCCACTTTCT+TGG | - | chr1_1:61340396-61340415 | Msa0033700:intron | 35.0% | |
| !! | ATGCCAAGAAAGTGGATTAA+AGG | + | chr1_1:61340402-61340421 | None:intergenic | 35.0% |
| TTTAATCCACTTTCTTGGCA+TGG | - | chr1_1:61340401-61340420 | Msa0033700:intron | 35.0% | |
| TGGTTGATCAAACTGATCAT+TGG | - | chr1_1:61340522-61340541 | Msa0033700:intron | 35.0% | |
| ATCAGCTATATGTTACGAGA+AGG | - | chr1_1:61340604-61340623 | Msa0033700:intron | 35.0% | |
| TCAGCTATATGTTACGAGAA+GGG | - | chr1_1:61340605-61340624 | Msa0033700:intron | 35.0% | |
| ATCTCTCCAAAGATTGTACA+AGG | - | chr1_1:61340657-61340676 | Msa0033700:intron | 35.0% | |
| TCTCTCCAAAGATTGTACAA+GGG | - | chr1_1:61340658-61340677 | Msa0033700:intron | 35.0% | |
| GTACAAGGGAAGACTTTAAA+TGG | - | chr1_1:61340672-61340691 | Msa0033700:intron | 35.0% | |
| GCGGTTATAAAGTCAAATTG+AGG | - | chr1_1:61340876-61340895 | Msa0033700:intron | 35.0% | |
| TGGAATTTCTCCTTTGTTCA+AGG | + | chr1_1:61341107-61341126 | None:intergenic | 35.0% | |
| AAAGGAGAAATTCCATCATC+AGG | - | chr1_1:61341112-61341131 | Msa0033700:intron | 35.0% | |
| CAGTGAAAAAATGGCAACAT+TGG | - | chr1_1:61341189-61341208 | Msa0033700:intron | 35.0% | |
| ! | TTTCTGAGGAATATCTGCAA+GGG | - | chr1_1:61341221-61341240 | Msa0033700:intron | 35.0% |
| ! | GTTTTTGATCAGCAGCATTT+TGG | - | chr1_1:61341277-61341296 | Msa0033700:intron | 35.0% |
| TTGATTTCTTAGCATGGTGA+TGG | + | chr1_1:61341303-61341322 | None:intergenic | 35.0% | |
| TATTTCTTCATTCAGCTGCA+AGG | + | chr1_1:61341326-61341345 | None:intergenic | 35.0% | |
| TCAATCTTCAAAACTCTGTG+AGG | - | chr1_1:61341622-61341641 | Msa0033700:intron | 35.0% | |
| ! | GCATTAAATTTTGCCAAGGA+AGG | + | chr1_1:61341701-61341720 | None:intergenic | 35.0% |
| TCCTTGGCAAAATTTAATGC+AGG | - | chr1_1:61341701-61341720 | Msa0033700:intron | 35.0% | |
| ! | ACCTGCATTAAATTTTGCCA+AGG | + | chr1_1:61341705-61341724 | None:intergenic | 35.0% |
| ! | ACAACCAAAGGCTTTTCAAT+TGG | - | chr1_1:61341918-61341937 | Msa0033700:intron | 35.0% |
| TCCAATCACAACCATAATCA+GGG | + | chr1_1:61341957-61341976 | None:intergenic | 35.0% | |
| ! | AGACCTACACTAAGATGTTT+TGG | - | chr1_1:61342038-61342057 | Msa0033700:intron | 35.0% |
| TGACCAAAACATCTTAGTGT+AGG | + | chr1_1:61342044-61342063 | None:intergenic | 35.0% | |
| GCAGTTTATAGTTGCAACTT+GGG | - | chr1_1:61342093-61342112 | Msa0033700:intron | 35.0% | |
| ! | TCTTGTTTACAACCCAATCT+TGG | - | chr1_1:61342120-61342139 | Msa0033700:intron | 35.0% |
| ACCTATCAAGATCCAAGATT+GGG | + | chr1_1:61342135-61342154 | None:intergenic | 35.0% | |
| TACCTATCAAGATCCAAGAT+TGG | + | chr1_1:61342136-61342155 | None:intergenic | 35.0% | |
| !!! | TATCTATTTTGACTCCGTCA+AGG | - | chr1_1:61342266-61342285 | Msa0033700:intron | 35.0% |
| CTAGTCAAAATAGTCCTTGA+CGG | + | chr1_1:61342283-61342302 | None:intergenic | 35.0% | |
| !!! | TCAAGGACTATTTTGACTAG+TGG | - | chr1_1:61342283-61342302 | Msa0033700:intron | 35.0% |
| ACTGACATAATTACACCAAG+GGG | + | chr1_1:61342472-61342491 | None:intergenic | 35.0% | |
| CACTGACATAATTACACCAA+GGG | + | chr1_1:61342473-61342492 | None:intergenic | 35.0% | |
| ACACTGACATAATTACACCA+AGG | + | chr1_1:61342474-61342493 | None:intergenic | 35.0% | |
| GTATAAAGGTAATAGCCACT+GGG | + | chr1_1:61342536-61342555 | None:intergenic | 35.0% | |
| TGTATAAAGGTAATAGCCAC+TGG | + | chr1_1:61342537-61342556 | None:intergenic | 35.0% | |
| ! | TAGTCTGTTCTTTGTCGATT+TGG | + | chr1_1:61342577-61342596 | None:intergenic | 35.0% |
| TGCATTCCTTTGTTCAACTT+AGG | - | chr1_1:61342704-61342723 | Msa0033700:intron | 35.0% | |
| GCATTCCTTTGTTCAACTTA+GGG | - | chr1_1:61342705-61342724 | Msa0033700:intron | 35.0% | |
| ! | TTTCACCCTAAGTTGAACAA+AGG | + | chr1_1:61342713-61342732 | None:intergenic | 35.0% |
| ATATTTGGATCGGATCGGTT+CGG | + | chr1_1:61329132-61329151 | None:intergenic | 40.0% | |
| CGCATATATTTGGATCGGAT+CGG | + | chr1_1:61329137-61329156 | None:intergenic | 40.0% | |
| CGATCCGATCCAAATATATG+CGG | - | chr1_1:61329135-61329154 | Msa0033700:three_prime_UTR | 40.0% | |
| !!! | TTTACTTTTGCGGTTCGGTT+TGG | - | chr1_1:61329439-61329458 | Msa0033700:intron | 40.0% |
| AAAAACCGCTATGATCGGAT+CGG | + | chr1_1:61329497-61329516 | None:intergenic | 40.0% | |
| !! | GATGTGCTTGGATGTTGTTT+TGG | + | chr1_1:61329520-61329539 | None:intergenic | 40.0% |
| !!! | GGTTTTTTTGGATCGGTTTG+CGG | - | chr1_1:61329568-61329587 | Msa0033700:intron | 40.0% |
| AATAGCTGCTAGAAAAGGCT+GGG | - | chr1_1:61329656-61329675 | Msa0033700:CDS | 40.0% | |
| AGGGATTACATTGCTAACCA+TGG | - | chr1_1:61329851-61329870 | Msa0033700:CDS | 40.0% | |
| AGGGATTACATTGCTAACCA+TGG | - | chr1_1:61329851-61329870 | Msa0033700:CDS | 40.0% | |
| AGGCAACCTTGGTTAATACA+GGG | + | chr1_1:61330279-61330298 | None:intergenic | 40.0% | |
| AAAATACGGGATGATCAGAG+AGG | + | chr1_1:61330299-61330318 | None:intergenic | 40.0% | |
| ! | ATCTTGAGCAATTGTCGCTT+CGG | + | chr1_1:61330374-61330393 | None:intergenic | 40.0% |
| ! | AAATTTTATGGCATGCCGGA+GGG | + | chr1_1:61330419-61330438 | None:intergenic | 40.0% |
| TAGGTTGTTGATCCAATGTC+AGG | + | chr1_1:61330458-61330477 | None:intergenic | 40.0% | |
| TTTGATAGAATTGGTAGGGG+GGG | + | chr1_1:61330546-61330565 | None:intergenic | 40.0% | |
| TTGATTTATTTGACCGGGGT+AGG | - | chr1_1:61330652-61330671 | Msa0033700:CDS | 40.0% | |
| !! | ATGAGATGCGACCGATTTTT+CGG | - | chr1_1:61330863-61330882 | Msa0033700:intron | 40.0% |
| CAAAGTGATGCATACGGAAT+CGG | - | chr1_1:61330967-61330986 | Msa0033700:intron | 40.0% | |
| !! | ATACAGCCAGATGGGTTAAA+TGG | + | chr1_1:61331121-61331140 | None:intergenic | 40.0% |
| !! | GTGTATTCTTTAAGGCTGTC+TGG | - | chr1_1:61331800-61331819 | Msa0033700:intron | 40.0% |
| CGAGTAATAGCCGTGTAATT+AGG | - | chr1_1:61333143-61333162 | Msa0033700:intron | 40.0% | |
| AAATATGACCATCATCACGG+TGG | - | chr1_1:61333207-61333226 | Msa0033700:CDS | 40.0% | |
| GTTAAATACCACCGTGATGA+TGG | + | chr1_1:61333218-61333237 | None:intergenic | 40.0% | |
| ! | AATGCTAACTTGTGCTCTCA+AGG | - | chr1_1:61333548-61333567 | Msa0033700:intron | 40.0% |
| CTCTCAAGGACACATGTTAA+GGG | - | chr1_1:61333562-61333581 | Msa0033700:intron | 40.0% | |
| !!! | TTTTAACGGGTTAGATTCGC+AGG | + | chr1_1:61333873-61333892 | None:intergenic | 40.0% |
| !! | TATTGAGCGGGTTAGTTCAA+CGG | + | chr1_1:61334085-61334104 | None:intergenic | 40.0% |
| TGAACTAACCCGCTCAATAT+TGG | - | chr1_1:61334086-61334105 | Msa0033700:CDS | 40.0% | |
| GAACTAACCCGCTCAATATT+GGG | - | chr1_1:61334087-61334106 | Msa0033700:CDS | 40.0% | |
| TTGCCCAACCTATACCAATT+AGG | - | chr1_1:61334149-61334168 | Msa0033700:intron | 40.0% | |
| CAAGCCTAATTGGTATAGGT+TGG | + | chr1_1:61334156-61334175 | None:intergenic | 40.0% | |
| ! | AAAGCATTATGGGTGTTCAC+GGG | + | chr1_1:61334222-61334241 | None:intergenic | 40.0% |
| TCTCGAAAGAAGAGCTTAAG+CGG | + | chr1_1:61334487-61334506 | None:intergenic | 40.0% | |
| TGGCGTGTGATAACAAAAGT+CGG | + | chr1_1:61334565-61334584 | None:intergenic | 40.0% | |
| !! | TTGGTCTGTTGGTATTGACT+TGG | + | chr1_1:61335282-61335301 | None:intergenic | 40.0% |
| ACCAACAGACCAAACTTAAG+TGG | - | chr1_1:61335289-61335308 | Msa0033700:intron | 40.0% | |
| CCAACAGACCAAACTTAAGT+GGG | - | chr1_1:61335290-61335309 | Msa0033700:intron | 40.0% | |
| GGAGAAGGAAGAAGAAAACT+TGG | + | chr1_1:61335392-61335411 | None:intergenic | 40.0% | |
| ! | AGTTAAGAATCATGGTGGAG+TGG | + | chr1_1:61335413-61335432 | None:intergenic | 40.0% |
| GCGGTGTAAGTTAAGAATCA+TGG | + | chr1_1:61335421-61335440 | None:intergenic | 40.0% | |
| ATGAAGGAAAACCTAGAGAG+CGG | + | chr1_1:61335440-61335459 | None:intergenic | 40.0% | |
| GCAGCACCATATTGAGATTA+TGG | + | chr1_1:61335559-61335578 | None:intergenic | 40.0% | |
| AAAGGAAGGAGTTGAAGAGA+GGG | + | chr1_1:61335600-61335619 | None:intergenic | 40.0% | |
| AAAAGGAAGGAGTTGAAGAG+AGG | + | chr1_1:61335601-61335620 | None:intergenic | 40.0% | |
| GTGGAAATTGTGGATGGAAA+AGG | + | chr1_1:61335618-61335637 | None:intergenic | 40.0% | |
| GAAGGAATTGGTAAGACTCA+CGG | + | chr1_1:61335644-61335663 | None:intergenic | 40.0% | |
| AATTAGGGAATAGTTGACGG+AGG | - | chr1_1:61335918-61335937 | Msa0033700:intron | 40.0% | |
| AGCAGTTGAACTAGCTGATA+TGG | - | chr1_1:61335980-61335999 | Msa0033700:intron | 40.0% | |
| ACCGAACATCTGTGTAAAAC+TGG | - | chr1_1:61336198-61336217 | Msa0033700:intron | 40.0% | |
| ! | CCCAGTTTTACACAGATGTT+CGG | + | chr1_1:61336202-61336221 | None:intergenic | 40.0% |
| CCGAACATCTGTGTAAAACT+GGG | - | chr1_1:61336199-61336218 | Msa0033700:intron | 40.0% | |
| TCCCTTTCCTCTTTGCAATA+TGG | - | chr1_1:61336241-61336260 | Msa0033700:intron | 40.0% | |
| ! | TACAAAAAGGGTGGTAGTGA+TGG | - | chr1_1:61336298-61336317 | Msa0033700:intron | 40.0% |
| ! | ACAAAAAGGGTGGTAGTGAT+GGG | - | chr1_1:61336299-61336318 | Msa0033700:intron | 40.0% |
| !!! | ATGATTTTTTGCCAGTAGCG+AGG | - | chr1_1:61336322-61336341 | Msa0033700:intron | 40.0% |
| !!! | TGATTTTTTGCCAGTAGCGA+GGG | - | chr1_1:61336323-61336342 | Msa0033700:intron | 40.0% |
| CTTGTGTAATCGATCATCCA+TGG | + | chr1_1:61336554-61336573 | None:intergenic | 40.0% | |
| GGCCAACTCAATCAATAGTT+TGG | - | chr1_1:61336806-61336825 | Msa0033700:intron | 40.0% | |
| AGTGTGTAACAGAAGCAACA+TGG | + | chr1_1:61336885-61336904 | None:intergenic | 40.0% | |
| !!! | TGGTTTTAGTGAGATCCTCT+TGG | - | chr1_1:61336925-61336944 | Msa0033700:intron | 40.0% |
| !! | GGTTTTAGTGAGATCCTCTT+GGG | - | chr1_1:61336926-61336945 | Msa0033700:intron | 40.0% |
| ! | CAGTTTTCCCATTGTTGAAC+CGG | - | chr1_1:61337052-61337071 | Msa0033700:intron | 40.0% |
| !! | AGTTTTGTATGACCAGGATC+CGG | + | chr1_1:61337074-61337093 | None:intergenic | 40.0% |
| AAACTCCGTCTTTCAAGAGA+AGG | - | chr1_1:61337089-61337108 | Msa0033700:intron | 40.0% | |
| CCAAACCTTCTCTTGAAAGA+CGG | + | chr1_1:61337097-61337116 | None:intergenic | 40.0% | |
| TCTTTCAAGAGAAGGTTTGG+AGG | - | chr1_1:61337097-61337116 | Msa0033700:intron | 40.0% | |
| !! | GATGATGGGATGTTCTTAGA+TGG | - | chr1_1:61337245-61337264 | Msa0033700:intron | 40.0% |
| !! | GGTTGTTTCTATCAGGTGAT+TGG | - | chr1_1:61337307-61337326 | Msa0033700:intron | 40.0% |
| ATGCGTGATGTCAAGACAAA+AGG | - | chr1_1:61337510-61337529 | Msa0033700:intron | 40.0% | |
| GGTTCATATCTTCAGGGATA+TGG | - | chr1_1:61337616-61337635 | Msa0033700:intron | 40.0% | |
| TATCTTCAGGGATATGGGTT+TGG | - | chr1_1:61337622-61337641 | Msa0033700:intron | 40.0% | |
| ATCTTCAGGGATATGGGTTT+GGG | - | chr1_1:61337623-61337642 | Msa0033700:intron | 40.0% | |
| AGACATTATCTAACCGTCTC+AGG | + | chr1_1:61337889-61337908 | None:intergenic | 40.0% | |
| ACAACTAATGCCGCATATCA+TGG | + | chr1_1:61338188-61338207 | None:intergenic | 40.0% | |
| ! | ATGCGGCATTAGTTGTTGTT+AGG | - | chr1_1:61338192-61338211 | Msa0033700:intron | 40.0% |
| ! | TGCGGCATTAGTTGTTGTTA+GGG | - | chr1_1:61338193-61338212 | Msa0033700:intron | 40.0% |
| ATTTGTTTGCTTCCGGTGAT+TGG | + | chr1_1:61338251-61338270 | None:intergenic | 40.0% | |
| !! | CACGGTAATTTGTTTGCTTC+CGG | + | chr1_1:61338258-61338277 | None:intergenic | 40.0% |
| CAAATTACCGTGGTGTGATA+TGG | - | chr1_1:61338266-61338285 | Msa0033700:intron | 40.0% | |
| !!! | AGAGTTTTGGGACAACGATA+GGG | + | chr1_1:61338303-61338322 | None:intergenic | 40.0% |
| !!! | TAGAGTTTTGGGACAACGAT+AGG | + | chr1_1:61338304-61338323 | None:intergenic | 40.0% |
| TGAAACTTGACTGCATGTAG+AGG | - | chr1_1:61338398-61338417 | Msa0033700:intron | 40.0% | |
| ! | TTGCTGAAGAATTTTACGGG+AGG | - | chr1_1:61338571-61338590 | Msa0033700:intron | 40.0% |
| TGTGTATCCCTAAAAGGAAG+AGG | + | chr1_1:61338677-61338696 | None:intergenic | 40.0% | |
| CATACGGCAGTTGCAAATTT+AGG | + | chr1_1:61338735-61338754 | None:intergenic | 40.0% | |
| TTACCTTCACCCTGTTCATA+CGG | + | chr1_1:61338751-61338770 | None:intergenic | 40.0% | |
| TTGAGTCGTGTTCATACTTC+AGG | - | chr1_1:61338977-61338996 | Msa0033700:intron | 40.0% | |
| ATGAAGACTAAAGAATCCCG+GGG | + | chr1_1:61339032-61339051 | None:intergenic | 40.0% | |
| GATCGAGACATTTAAAGGGA+TGG | + | chr1_1:61339059-61339078 | None:intergenic | 40.0% | |
| AGGGAAATCAGTGCAAGAAA+TGG | - | chr1_1:61339352-61339371 | Msa0033700:intron | 40.0% | |
| CAAAGAGTCCCAAATACCAA+TGG | - | chr1_1:61339389-61339408 | Msa0033700:intron | 40.0% | |
| GGTGCTAACCATTGGTATTT+GGG | + | chr1_1:61339400-61339419 | None:intergenic | 40.0% | |
| ! | TGGTGCTAACCATTGGTATT+TGG | + | chr1_1:61339401-61339420 | None:intergenic | 40.0% |
| ! | TCTTCAGGTTAATCAGATCC+GGG | - | chr1_1:61339625-61339644 | Msa0033700:intron | 40.0% |
| TTTGGACTAACACATACCTG+TGG | + | chr1_1:61339695-61339714 | None:intergenic | 40.0% | |
| CAAGGAAACATATGGCAAGT+TGG | + | chr1_1:61339909-61339928 | None:intergenic | 40.0% | |
| CAACTTGCCATATGTTTCCT+TGG | - | chr1_1:61339907-61339926 | Msa0033700:intron | 40.0% | |
| CAACACAACTGGGAAGAAAA+AGG | + | chr1_1:61340161-61340180 | None:intergenic | 40.0% | |
| AAACAACAGGCAACACAACT+GGG | + | chr1_1:61340171-61340190 | None:intergenic | 40.0% | |
| TAAACAACAGGCAACACAAC+TGG | + | chr1_1:61340172-61340191 | None:intergenic | 40.0% | |
| GTCTTCCCTTGTACAATCTT+TGG | + | chr1_1:61340666-61340685 | None:intergenic | 40.0% | |
| AGGGAAGACTTTAAATGGGA+AGG | - | chr1_1:61340677-61340696 | Msa0033700:intron | 40.0% | |
| ATTTGTCTCTTTCCTAGAGC+AGG | - | chr1_1:61340701-61340720 | Msa0033700:intron | 40.0% | |
| AATAGCGTTTCACTCTTCGT+CGG | - | chr1_1:61340854-61340873 | Msa0033700:intron | 40.0% | |
| ATACTTGACGCCTTGAACAA+AGG | - | chr1_1:61341094-61341113 | Msa0033700:intron | 40.0% | |
| ! | CTTGTGGAGGTTTTCAACAA+AGG | - | chr1_1:61341139-61341158 | Msa0033700:intron | 40.0% |
| ATTGGATCTACCTCTTTCTG+AGG | - | chr1_1:61341207-61341226 | Msa0033700:intron | 40.0% | |
| TGCAGATATTCCTCAGAAAG+AGG | + | chr1_1:61341220-61341239 | None:intergenic | 40.0% | |
| ! | CTTTCTGAGGAATATCTGCA+AGG | - | chr1_1:61341220-61341239 | Msa0033700:intron | 40.0% |
| ! | TTCTGAGGAATATCTGCAAG+GGG | - | chr1_1:61341222-61341241 | Msa0033700:intron | 40.0% |
| ! | GCAAGGTTGATTTCTTAGCA+TGG | + | chr1_1:61341309-61341328 | None:intergenic | 40.0% |
| CATCAGATGTGAGGACAAAA+TGG | - | chr1_1:61341652-61341671 | Msa0033700:intron | 40.0% | |
| !! | AGTTTTGATCGTGAATGCGT+TGG | - | chr1_1:61341743-61341762 | Msa0033700:intron | 40.0% |
| ! | GTCGCATAATTTGTCTTCGA+AGG | + | chr1_1:61341770-61341789 | None:intergenic | 40.0% |
| CGAAGACAAATTATGCGACA+CGG | - | chr1_1:61341771-61341790 | Msa0033700:intron | 40.0% | |
| TTATGCGACACGGATGAATA+AGG | - | chr1_1:61341781-61341800 | Msa0033700:intron | 40.0% | |
| CCAACCAATTGAAAAGCCTT+TGG | + | chr1_1:61341925-61341944 | None:intergenic | 40.0% | |
| ! | CCAAAGGCTTTTCAATTGGT+TGG | - | chr1_1:61341922-61341941 | Msa0033700:intron | 40.0% |
| ! | AAGGCTTTTCAATTGGTTGG+TGG | - | chr1_1:61341925-61341944 | Msa0033700:intron | 40.0% |
| TCCCTGATTATGGTTGTGAT+TGG | - | chr1_1:61341953-61341972 | Msa0033700:intron | 40.0% | |
| GTCCAATCACAACCATAATC+AGG | + | chr1_1:61341958-61341977 | None:intergenic | 40.0% | |
| GGCAGTTTATAGTTGCAACT+TGG | - | chr1_1:61342092-61342111 | Msa0033700:intron | 40.0% | |
| ACCCAATCTTGGATCTTGAT+AGG | - | chr1_1:61342131-61342150 | Msa0033700:intron | 40.0% | |
| TGGAGTTATGGGAGGAAATA+TGG | - | chr1_1:61342508-61342527 | Msa0033700:intron | 40.0% | |
| TAAGAGAATCCACACCATCA+TGG | + | chr1_1:61342650-61342669 | None:intergenic | 40.0% | |
| GCATATGAAGCTGACTGTGT+TGG | - | chr1_1:61328983-61329002 | Msa0033700:three_prime_UTR | 45.0% | |
| ATGAAGCTGACTGTGTTGGA+AGG | - | chr1_1:61328987-61329006 | Msa0033700:three_prime_UTR | 45.0% | |
| AAATCACGTGCGGTTCGATT+CGG | - | chr1_1:61329082-61329101 | Msa0033700:three_prime_UTR | 45.0% | |
| !!! | TTTTGCGGTTCGGTTTGGTT+CGG | - | chr1_1:61329444-61329463 | Msa0033700:intron | 45.0% |
| GCTATGATCGGATCGGATTT+CGG | + | chr1_1:61329490-61329509 | None:intergenic | 45.0% | |
| GAAATCCGATCCGATCATAG+CGG | - | chr1_1:61329489-61329508 | Msa0033700:intron | 45.0% | |
| TTGGATTTGAACACCCCTAG+AGG | - | chr1_1:61329608-61329627 | Msa0033700:intron | 45.0% | |
| GAATAGCTGCTAGAAAAGGC+TGG | - | chr1_1:61329655-61329674 | Msa0033700:CDS | 45.0% | |
| ACGTCCAAGCTGCATACTTT+AGG | - | chr1_1:61329744-61329763 | Msa0033700:CDS | 45.0% | |
| TTCGCCTAAAGTATGCAGCT+TGG | + | chr1_1:61329751-61329770 | None:intergenic | 45.0% | |
| GTGTCCAAGCTGCATACTTT+AGG | - | chr1_1:61329984-61330003 | Msa0033700:CDS | 45.0% | |
| TTCGCCTAAAGTATGCAGCT+TGG | + | chr1_1:61329751-61329770 | None:intergenic | 45.0% | |
| TAAGTGAAGACGCTTCTCCA+TGG | + | chr1_1:61330111-61330130 | None:intergenic | 45.0% | |
| CGAAAGCCCTGTATTAACCA+AGG | - | chr1_1:61330270-61330289 | Msa0033700:intron | 45.0% | |
| GAGGCAACCTTGGTTAATAC+AGG | + | chr1_1:61330280-61330299 | None:intergenic | 45.0% | |
| TGTCACTAAAGTCCCCAGTA+AGG | - | chr1_1:61330339-61330358 | Msa0033700:intron | 45.0% | |
| ACTAAAGTCCCCAGTAAGGA+AGG | - | chr1_1:61330343-61330362 | Msa0033700:intron | 45.0% | |
| CTAAAGTCCCCAGTAAGGAA+GGG | - | chr1_1:61330344-61330363 | Msa0033700:intron | 45.0% | |
| ! | AATTTTATGGCATGCCGGAG+GGG | + | chr1_1:61330418-61330437 | None:intergenic | 45.0% |
| ! | CAAATTTTATGGCATGCCGG+AGG | + | chr1_1:61330420-61330439 | None:intergenic | 45.0% |
| CTCCGGCATGCCATAAAATT+TGG | - | chr1_1:61330418-61330437 | Msa0033700:intron | 45.0% | |
| TTGATCCAATGTCAGGTCGT+TGG | + | chr1_1:61330451-61330470 | None:intergenic | 45.0% | |
| ! | GGGGAAGTTTAGCTTACCTT+CGG | + | chr1_1:61330527-61330546 | None:intergenic | 45.0% |
| !! | TGTACTTATAAGCGCCGAAG+AGG | - | chr1_1:61330715-61330734 | Msa0033700:intron | 45.0% |
| ! | AGAGACGTTTCAAGTCGTTG+AGG | - | chr1_1:61330806-61330825 | Msa0033700:intron | 45.0% |
| !! | TCACTTTGAAATGAGTCGCG+AGG | - | chr1_1:61330893-61330912 | Msa0033700:intron | 45.0% |
| TAGAAGGGTCATGACTCATG+AGG | - | chr1_1:61330999-61331018 | Msa0033700:intron | 45.0% | |
| ! | TGGTTGGTCCCCTTCATATA+AGG | + | chr1_1:61333247-61333266 | None:intergenic | 45.0% |
| GCTCTCAAGGACACATGTTA+AGG | - | chr1_1:61333561-61333580 | Msa0033700:intron | 45.0% | |
| !! | ATTGAGCGGGTTAGTTCAAC+GGG | + | chr1_1:61334084-61334103 | None:intergenic | 45.0% |
| TAACCCGCTCAATATTGGGT+TGG | - | chr1_1:61334091-61334110 | Msa0033700:CDS | 45.0% | |
| CCAATTAGGCTTGATCAGGT+CGG | - | chr1_1:61334163-61334182 | Msa0033700:intron | 45.0% | |
| CAATTAGGCTTGATCAGGTC+GGG | - | chr1_1:61334164-61334183 | Msa0033700:intron | 45.0% | |
| ATCAGGTCGGGTAACAGATT+TGG | - | chr1_1:61334176-61334195 | Msa0033700:intron | 45.0% | |
| ATTGCAATAAATGGCGACCG+CGG | + | chr1_1:61334332-61334351 | None:intergenic | 45.0% | |
| ! | TGGCGTTTTGCATGTCACTA+TGG | - | chr1_1:61334412-61334431 | Msa0033700:CDS | 45.0% |
| ATGGATACCCTGAAGCTCTA+TGG | - | chr1_1:61334431-61334450 | Msa0033700:CDS | 45.0% | |
| ACTGACACCATAGAGCTTCA+GGG | + | chr1_1:61334441-61334460 | None:intergenic | 45.0% | |
| AACTGACACCATAGAGCTTC+AGG | + | chr1_1:61334442-61334461 | None:intergenic | 45.0% | |
| GCTTAAGCTCTTCTTTCGAG+AGG | - | chr1_1:61334486-61334505 | Msa0033700:intron | 45.0% | |
| CTGCCCCTCAATTCATTTCA+AGG | - | chr1_1:61334527-61334546 | Msa0033700:intron | 45.0% | |
| CCCACTTAAGTTTGGTCTGT+TGG | + | chr1_1:61335293-61335312 | None:intergenic | 45.0% | |
| GCACGATTGCATGCAATACA+TGG | + | chr1_1:61335325-61335344 | None:intergenic | 45.0% | |
| CTTAACTTACACCGCTCTCT+AGG | - | chr1_1:61335426-61335445 | Msa0033700:intron | 45.0% | |
| GAATTGGTAAGACTCACGGT+TGG | + | chr1_1:61335640-61335659 | None:intergenic | 45.0% | |
| ! | ATCCTCTTGGGCATTGTACA+TGG | - | chr1_1:61336938-61336957 | Msa0033700:intron | 45.0% |
| !! | AGACGGAGTTTTGTATGACC+AGG | + | chr1_1:61337080-61337099 | None:intergenic | 45.0% |
| CCGTCTTTCAAGAGAAGGTT+TGG | - | chr1_1:61337094-61337113 | Msa0033700:intron | 45.0% | |
| AACAAACCCCATTGCATCTG+TGG | - | chr1_1:61337133-61337152 | Msa0033700:intron | 45.0% | |
| ATACAGCCACAGATGCAATG+GGG | + | chr1_1:61337142-61337161 | None:intergenic | 45.0% | |
| CATACAGCCACAGATGCAAT+GGG | + | chr1_1:61337143-61337162 | None:intergenic | 45.0% | |
| ACATACAGCCACAGATGCAA+TGG | + | chr1_1:61337144-61337163 | None:intergenic | 45.0% | |
| CGTGATGTCAAGACAAAAGG+TGG | - | chr1_1:61337513-61337532 | Msa0033700:intron | 45.0% | |
| TCTTCAGGGATATGGGTTTG+GGG | - | chr1_1:61337624-61337643 | Msa0033700:intron | 45.0% | |
| GTATACATTGGTCCATGCGA+AGG | - | chr1_1:61338055-61338074 | Msa0033700:intron | 45.0% | |
| CGGAAGCAAACAAATTACCG+TGG | - | chr1_1:61338256-61338275 | Msa0033700:intron | 45.0% | |
| CTTCTCTCCATATCACACCA+CGG | + | chr1_1:61338276-61338295 | None:intergenic | 45.0% | |
| ! | CATCTCTCGACTCTCTTTTG+CGG | - | chr1_1:61338542-61338561 | Msa0033700:intron | 45.0% |
| TTTGCAACTGCCGTATGAAC+AGG | - | chr1_1:61338738-61338757 | Msa0033700:intron | 45.0% | |
| TTGCAACTGCCGTATGAACA+GGG | - | chr1_1:61338739-61338758 | Msa0033700:intron | 45.0% | |
| AACAGGGTGAAGGTAAGACA+AGG | - | chr1_1:61338755-61338774 | Msa0033700:intron | 45.0% | |
| TTGAACCAGCTAAGCTCTTG+TGG | - | chr1_1:61338904-61338923 | Msa0033700:intron | 45.0% | |
| TGAAGACTAAAGAATCCCGG+GGG | + | chr1_1:61339031-61339050 | None:intergenic | 45.0% | |
| ! | CGAGAAATGGTGCTAACCAT+TGG | + | chr1_1:61339408-61339427 | None:intergenic | 45.0% |
| !! | TGACTTGGTATCTCCTCTTC+TGG | - | chr1_1:61339534-61339553 | Msa0033700:intron | 45.0% |
| TGGAAGTTGAACTCCAGAAG+AGG | + | chr1_1:61339550-61339569 | None:intergenic | 45.0% | |
| ! | CACTGCCTTTAGTTTACCAC+AGG | - | chr1_1:61339676-61339695 | Msa0033700:intron | 45.0% |
| GAATTCTGTTATGTGGAGCC+TGG | - | chr1_1:61339773-61339792 | Msa0033700:intron | 45.0% | |
| CTTGCCATATGTTTCCTTGG+TGG | - | chr1_1:61339910-61339929 | Msa0033700:intron | 45.0% | |
| AATCCACTTTCTTGGCATGG+TGG | - | chr1_1:61340404-61340423 | Msa0033700:intron | 45.0% | |
| ! | AGCTTTGTCCTCTGAAGATG+TGG | + | chr1_1:61340558-61340577 | None:intergenic | 45.0% |
| AGAAGCTAAGTACCTGCTCT+AGG | + | chr1_1:61340716-61340735 | None:intergenic | 45.0% | |
| TCCTTAACTAACAGCCTCAG+AGG | - | chr1_1:61340761-61340780 | Msa0033700:intron | 45.0% | |
| !! | TCCTCTGAGGCTGTTAGTTA+AGG | + | chr1_1:61340765-61340784 | None:intergenic | 45.0% |
| ATCTGCAAGGGGTCCATAAT+AGG | - | chr1_1:61341233-61341252 | Msa0033700:intron | 45.0% | |
| GGCAATGTACATCAGATGTG+AGG | - | chr1_1:61341643-61341662 | Msa0033700:intron | 45.0% | |
| AGTTCTCAGACTTCCTTCCT+TGG | - | chr1_1:61341685-61341704 | Msa0033700:intron | 45.0% | |
| TGCAGATGTTAGGGAAGTCT+AGG | - | chr1_1:61341876-61341895 | Msa0033700:intron | 45.0% | |
| TCTATTGGTGGAGTTATGGG+AGG | - | chr1_1:61342500-61342519 | Msa0033700:intron | 45.0% | |
| TGTCCATGATGTGTCCATGA+TGG | - | chr1_1:61342633-61342652 | Msa0033700:intron | 45.0% | |
| ACACCATCATGGACACATCA+TGG | + | chr1_1:61342639-61342658 | None:intergenic | 45.0% | |
| ! | ATGATGTGTCCATGATGGTG+TGG | - | chr1_1:61342638-61342657 | Msa0033700:intron | 45.0% |
| !!! | ATGAATTTTTATATTTTTTA+TGG | + | chr1_1:61332853-61332872 | None:intergenic | 5.0% |
| !!! | TAAAAAATTCTAAATTTTTT+TGG | - | chr1_1:61332891-61332910 | Msa0033700:intron | 5.0% |
| !!! | AAAAAATTCTAAATTTTTTT+GGG | - | chr1_1:61332892-61332911 | Msa0033700:intron | 5.0% |
| !!! | AATTTAACAATTTTTTTTAA+CGG | + | chr1_1:61333887-61333906 | None:intergenic | 5.0% |
| !!! | TATTTGTATAATATATTTTA+AGG | - | chr1_1:61333910-61333929 | Msa0033700:CDS | 5.0% |
| !!! | TCATTTAATATATATTTTTT+TGG | - | chr1_1:61334033-61334052 | Msa0033700:intron | 5.0% |
| !! | ATTTATATTCAAAATATAAA+TGG | + | chr1_1:61335016-61335035 | None:intergenic | 5.0% |
| !! | AAAAATAAAGAAAAAAATAT+AGG | + | chr1_1:61335094-61335113 | None:intergenic | 5.0% |
| !! | TTCGGTCTGGATCGGTTTTG+AGG | - | chr1_1:61329034-61329053 | Msa0033700:three_prime_UTR | 50.0% |
| CTTGGACGTTCCAGTCTGAA+AGG | + | chr1_1:61329733-61329752 | None:intergenic | 50.0% | |
| CTTGGACACTCCAGTCTGAA+AGG | + | chr1_1:61329973-61329992 | None:intergenic | 50.0% | |
| GATGATCAGAGAGGCAACCT+TGG | + | chr1_1:61330290-61330309 | None:intergenic | 50.0% | |
| ! | ATTTTATGGCATGCCGGAGG+GGG | + | chr1_1:61330417-61330436 | None:intergenic | 50.0% |
| AACCTCCAACGACCTGACAT+TGG | - | chr1_1:61330443-61330462 | Msa0033700:CDS | 50.0% | |
| ATCCAATGTCAGGTCGTTGG+AGG | + | chr1_1:61330448-61330467 | None:intergenic | 50.0% | |
| TGGGTTAAATGGAGCAGGTG+AGG | + | chr1_1:61331110-61331129 | None:intergenic | 50.0% | |
| !! | CCAGATGGGTTAAATGGAGC+AGG | + | chr1_1:61331115-61331134 | None:intergenic | 50.0% |
| CCTGCTCCATTTAACCCATC+TGG | - | chr1_1:61331112-61331131 | Msa0033700:CDS | 50.0% | |
| GGTCCAACCCAATATTGAGC+GGG | + | chr1_1:61334097-61334116 | None:intergenic | 50.0% | |
| CGGTCCAACCCAATATTGAG+CGG | + | chr1_1:61334098-61334117 | None:intergenic | 50.0% | |
| !! | CGCTCAATATTGGGTTGGAC+CGG | - | chr1_1:61334096-61334115 | Msa0033700:CDS | 50.0% |
| CCGACCTGATCAAGCCTAAT+TGG | + | chr1_1:61334166-61334185 | None:intergenic | 50.0% | |
| CATTATGGGTGTTCACGGGT+TGG | + | chr1_1:61334218-61334237 | None:intergenic | 50.0% | |
| TTGCAATAAATGGCGACCGC+GGG | + | chr1_1:61334331-61334350 | None:intergenic | 50.0% | |
| ! | GAATCATGGTGGAGTGGAGA+AGG | + | chr1_1:61335407-61335426 | None:intergenic | 50.0% |
| !! | CGGTTGGTGGAAATTGTGGA+TGG | + | chr1_1:61335624-61335643 | None:intergenic | 50.0% |
| !! | CTCACGGTTGGTGGAAATTG+TGG | + | chr1_1:61335628-61335647 | None:intergenic | 50.0% |
| TTGGTAAGACTCACGGTTGG+TGG | + | chr1_1:61335637-61335656 | None:intergenic | 50.0% | |
| CCAGGATCCGGTTCAACAAT+GGG | + | chr1_1:61337062-61337081 | None:intergenic | 50.0% | |
| ACCAGGATCCGGTTCAACAA+TGG | + | chr1_1:61337063-61337082 | None:intergenic | 50.0% | |
| ATGCGAAGGTAAAGTGCGCT+CGG | - | chr1_1:61338069-61338088 | Msa0033700:intron | 50.0% | |
| ATGAGCCACAAGAGCTTAGC+TGG | + | chr1_1:61338912-61338931 | None:intergenic | 50.0% | |
| TAGCACCATTTCTCGCGCTT+TGG | - | chr1_1:61339413-61339432 | Msa0033700:intron | 50.0% | |
| TTCGTCCAAAGCGCGAGAAA+TGG | + | chr1_1:61339421-61339440 | None:intergenic | 50.0% | |
| CGGCATGAAGAAAACCACCA+AGG | + | chr1_1:61339927-61339946 | None:intergenic | 50.0% | |
| TTATCACGAGCGATGCAAGC+TGG | + | chr1_1:61340062-61340081 | None:intergenic | 50.0% | |
| CTCAACAGCCACATCTTCAG+AGG | - | chr1_1:61340547-61340566 | Msa0033700:intron | 50.0% | |
| TCCATCATCAGGCTCTCTTG+TGG | - | chr1_1:61341123-61341142 | Msa0033700:intron | 50.0% | |
| TCCACAAGAGAGCCTGATGA+TGG | + | chr1_1:61341127-61341146 | None:intergenic | 50.0% | |
| ATCATCAGGCTCTCTTGTGG+AGG | - | chr1_1:61341126-61341145 | Msa0033700:intron | 50.0% | |
| GGTGGTGTTCTCCCTGATTA+TGG | - | chr1_1:61341943-61341962 | Msa0033700:intron | 50.0% | |
| !! | AACAGATGGGCTATACCCCT+TGG | - | chr1_1:61342454-61342473 | Msa0033700:intron | 50.0% |
| GGAGGAAATATGGATCCCAG+TGG | - | chr1_1:61342518-61342537 | Msa0033700:intron | 50.0% | |
| TGTTGGAAGGCGAGGCAGTT+AGG | - | chr1_1:61329000-61329019 | Msa0033700:three_prime_UTR | 55.0% | |
| GTTGGAAGGCGAGGCAGTTA+GGG | - | chr1_1:61329001-61329020 | Msa0033700:three_prime_UTR | 55.0% | |
| TTGGAAGGCGAGGCAGTTAG+GGG | - | chr1_1:61329002-61329021 | Msa0033700:three_prime_UTR | 55.0% | |
| !! | AGTTAGGGGTGTTCGCGGTT+CGG | - | chr1_1:61329016-61329035 | Msa0033700:three_prime_UTR | 55.0% |
| !! | ACGTGCGGTTCGATTCGGTT+TGG | - | chr1_1:61329087-61329106 | Msa0033700:three_prime_UTR | 55.0% |
| !! | CGGTTCGGTTTGGTTCGGTT+CGG | - | chr1_1:61329449-61329468 | Msa0033700:intron | 55.0% |
| CTGAGTGCAACTGCCTCTAG+GGG | + | chr1_1:61329624-61329643 | None:intergenic | 55.0% | |
| GCTGAGTGCAACTGCCTCTA+GGG | + | chr1_1:61329625-61329644 | None:intergenic | 55.0% | |
| TGCTGAGTGCAACTGCCTCT+AGG | + | chr1_1:61329626-61329645 | None:intergenic | 55.0% | |
| TCGGTCAGCCCTTCCTTACT+GGG | + | chr1_1:61330355-61330374 | None:intergenic | 55.0% | |
| TTCGGTCAGCCCTTCCTTAC+TGG | + | chr1_1:61330356-61330375 | None:intergenic | 55.0% | |
| ! | TTTTATGGCATGCCGGAGGG+GGG | + | chr1_1:61330416-61330435 | None:intergenic | 55.0% |
| GTGGGGCAGCCCTAATTACA+CGG | + | chr1_1:61333156-61333175 | None:intergenic | 55.0% | |
| !! | GGGTGTTCACGGGTTGGATT+GGG | + | chr1_1:61334212-61334231 | None:intergenic | 55.0% |
| !! | TGGGTGTTCACGGGTTGGAT+TGG | + | chr1_1:61334213-61334232 | None:intergenic | 55.0% |
| AACTGACCCAATCCAACCCG+CGG | - | chr1_1:61334203-61334222 | Msa0033700:intron | 55.0% | |
| AATAAATGGCGACCGCGGGT+TGG | + | chr1_1:61334327-61334346 | None:intergenic | 55.0% | |
| CGACATATCTCCCTCGCTAC+TGG | + | chr1_1:61336336-61336355 | None:intergenic | 55.0% | |
| GGCCATGTACAATGCCCAAG+AGG | + | chr1_1:61336943-61336962 | None:intergenic | 55.0% | |
| CCCATTGTTGAACCGGATCC+TGG | - | chr1_1:61337059-61337078 | Msa0033700:intron | 55.0% | |
| GAGCGCACTTTACCTTCGCA+TGG | + | chr1_1:61338070-61338089 | None:intergenic | 55.0% | |
| GACTGCATGTAGAGGACTGC+TGG | - | chr1_1:61338406-61338425 | Msa0033700:intron | 55.0% | |
| TACGGGAGGTTTGCATCTGC+TGG | - | chr1_1:61338585-61338604 | Msa0033700:intron | 55.0% | |
| GGAGGTTTGCATCTGCTGGA+TGG | - | chr1_1:61338589-61338608 | Msa0033700:intron | 55.0% | |
| CTGCCGTATGAACAGGGTGA+AGG | - | chr1_1:61338745-61338764 | Msa0033700:intron | 55.0% | |
| TAATCAGATCCGGGACTCGC+TGG | - | chr1_1:61339634-61339653 | Msa0033700:intron | 55.0% | |
| AAGCTGGTGCAGGCACTACT+GGG | + | chr1_1:61340046-61340065 | None:intergenic | 55.0% | |
| GTGCCACCATGCCAAGAAAG+TGG | + | chr1_1:61340410-61340429 | None:intergenic | 55.0% | |
| AGCGTTTCACTCTTCGTCGG+CGG | - | chr1_1:61340857-61340876 | Msa0033700:intron | 55.0% | |
| GCTGACTGTGTTGGAAGGCG+AGG | - | chr1_1:61328992-61329011 | Msa0033700:three_prime_UTR | 60.0% | |
| !! | GAGGCAGTTAGGGGTGTTCG+CGG | - | chr1_1:61329011-61329030 | Msa0033700:three_prime_UTR | 60.0% |
| !! | GTTCGCGGTTCGGTCTGGAT+CGG | - | chr1_1:61329026-61329045 | Msa0033700:three_prime_UTR | 60.0% |
| CGGTCAGCCCTTCCTTACTG+GGG | + | chr1_1:61330354-61330373 | None:intergenic | 60.0% | |
| GAGGGGCAGCAAGTCTACGA+AGG | + | chr1_1:61334516-61334535 | None:intergenic | 60.0% | |
| ! | GTGATTGGGCCGCATCGATC+TGG | - | chr1_1:61337322-61337341 | Msa0033700:intron | 60.0% |
| ACCTTCCAATTCCACGCCCC+CGG | - | chr1_1:61339012-61339031 | Msa0033700:intron | 60.0% | |
| ACTAAAGAATCCCGGGGGCG+TGG | + | chr1_1:61339026-61339045 | None:intergenic | 60.0% | |
| CCATCATAGCCAGCGAGTCC+CGG | + | chr1_1:61339646-61339665 | None:intergenic | 60.0% | |
| ! | CGGGACTCGCTGGCTATGAT+GGG | - | chr1_1:61339644-61339663 | Msa0033700:intron | 60.0% |
| ! | GGGACTCGCTGGCTATGATG+GGG | - | chr1_1:61339645-61339664 | Msa0033700:intron | 60.0% |
| CAAGCTGGTGCAGGCACTAC+TGG | + | chr1_1:61340047-61340066 | None:intergenic | 60.0% | |
| GGGGGACGCCGTAGGATTCT+TGG | + | chr1_1:61330398-61330417 | None:intergenic | 65.0% | |
| !! | TGGCGACCGCGGGTTGGATT+GGG | + | chr1_1:61334321-61334340 | None:intergenic | 65.0% |
| !! | ATGGCGACCGCGGGTTGGAT+TGG | + | chr1_1:61334322-61334341 | None:intergenic | 65.0% |
| ! | GGGGGCGTGGAATTGGAAGG+TGG | + | chr1_1:61339013-61339032 | None:intergenic | 65.0% |
| CCTTCCAATTCCACGCCCCC+GGG | - | chr1_1:61339013-61339032 | Msa0033700:intron | 65.0% | |
| ! | GAATCCCGGGGGCGTGGAAT+TGG | + | chr1_1:61339020-61339039 | None:intergenic | 65.0% |
| ! | CCGGGACTCGCTGGCTATGA+TGG | - | chr1_1:61339643-61339662 | Msa0033700:intron | 65.0% |
| CGAGCGATGCAAGCTGGTGC+AGG | + | chr1_1:61340056-61340075 | None:intergenic | 65.0% | |
| !! | GGGGTGTTCGCGGTTCGGTC+TGG | - | chr1_1:61329021-61329040 | Msa0033700:three_prime_UTR | 70.0% |
| ATCCTACGGCGTCCCCCCTC+CGG | - | chr1_1:61330401-61330420 | Msa0033700:intron | 70.0% | |
| ! | CCCGGGGGCGTGGAATTGGA+AGG | + | chr1_1:61339016-61339035 | None:intergenic | 70.0% |
| ! | TGCCGGAGGGGGGACGCCGT+AGG | + | chr1_1:61330406-61330425 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 61328963 | 61342822 | 61328963 | ID=Msa0033700;Name=Msa0033700 |
| chr1_1 | mRNA | 61328963 | 61342822 | 61328963 | ID=Msa0033700-mRNA-1;Parent=Msa0033700;Name=Msa0033700-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.82|0.77|0.88|1|1|18|225|636 |
| chr1_1 | exon | 61328963 | 61329326 | 61328963 | ID=Msa0033700-mRNA-1:exon:19267;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61329633 | 61329904 | 61329633 | ID=Msa0033700-mRNA-1:exon:19266;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61329983 | 61330195 | 61329983 | ID=Msa0033700-mRNA-1:exon:19265;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61330434 | 61330691 | 61330434 | ID=Msa0033700-mRNA-1:exon:19264;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61331063 | 61331230 | 61331063 | ID=Msa0033700-mRNA-1:exon:19263;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61332088 | 61332153 | 61332088 | ID=Msa0033700-mRNA-1:exon:19262;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61332245 | 61332264 | 61332245 | ID=Msa0033700-mRNA-1:exon:19261;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61332375 | 61332434 | 61332375 | ID=Msa0033700-mRNA-1:exon:19260;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61332837 | 61332897 | 61332837 | ID=Msa0033700-mRNA-1:exon:19259;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61333019 | 61333025 | 61333019 | ID=Msa0033700-mRNA-1:exon:19258;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61333193 | 61333257 | 61333193 | ID=Msa0033700-mRNA-1:exon:19257;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61333891 | 61333948 | 61333891 | ID=Msa0033700-mRNA-1:exon:19256;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61334037 | 61334154 | 61334037 | ID=Msa0033700-mRNA-1:exon:19255;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61334254 | 61334292 | 61334254 | ID=Msa0033700-mRNA-1:exon:19254;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61334394 | 61334463 | 61334394 | ID=Msa0033700-mRNA-1:exon:19253;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61334628 | 61334730 | 61334628 | ID=Msa0033700-mRNA-1:exon:19252;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61341474 | 61341574 | 61341474 | ID=Msa0033700-mRNA-1:exon:19251;Parent=Msa0033700-mRNA-1 |
| chr1_1 | exon | 61342730 | 61342822 | 61342730 | ID=Msa0033700-mRNA-1:exon:19250;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61342730 | 61342822 | 61342730 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61341474 | 61341574 | 61341474 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61334628 | 61334730 | 61334628 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61334394 | 61334463 | 61334394 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61334254 | 61334292 | 61334254 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61334037 | 61334154 | 61334037 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61333891 | 61333948 | 61333891 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61333193 | 61333257 | 61333193 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61333019 | 61333025 | 61333019 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61332837 | 61332897 | 61332837 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61332375 | 61332434 | 61332375 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61332245 | 61332264 | 61332245 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61332088 | 61332153 | 61332088 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61331063 | 61331230 | 61331063 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61330434 | 61330691 | 61330434 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61329983 | 61330195 | 61329983 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61329633 | 61329904 | 61329633 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | CDS | 61329188 | 61329326 | 61329188 | ID=Msa0033700-mRNA-1:cds;Parent=Msa0033700-mRNA-1 |
| chr1_1 | three_prime_UTR | 61328963 | 61329187 | 61328963 | ID=Msa0033700-mRNA-1:three_prime_utr;Parent=Msa0033700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
