Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124000 | sp|Q96PP9|GBP4_HUMAN | 28.111 | 434 | 266 | 18 | 18 | 418 | 14 | 434 | 9.33e-32 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124000 | G7ICN5 | 97.208 | 573 | 16 | 0 | 23 | 595 | 24 | 596 | 0.0 | 1168 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033700 | Msa0124000 | 0.887480 | 1.375112e-72 | -8.615850e-47 |
| Msa0124000 | Msa0726690 | 0.802598 | 5.200272e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124000 | MtrunA17_Chr7g0260571 | 79.268 | 574 | 115 | 2 | 23 | 595 | 28 | 598 | 0.0 | 968 |
| Msa0124000 | MtrunA17_Chr1g0184861 | 96.912 | 421 | 13 | 0 | 175 | 595 | 4 | 424 | 0.0 | 859 |
| Msa0124000 | MtrunA17_Chr1g0184871 | 98.039 | 153 | 3 | 0 | 23 | 175 | 24 | 176 | 7.35e-104 | 311 |
| Msa0124000 | MtrunA17_Chr4g0046381 | 27.431 | 401 | 260 | 12 | 36 | 411 | 49 | 443 | 7.16e-32 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124000 | AT2G38840.1 | 75.784 | 574 | 138 | 1 | 23 | 595 | 29 | 602 | 0.0 | 939 |
| Msa0124000 | AT2G38840.2 | 72.009 | 443 | 123 | 1 | 154 | 595 | 2 | 444 | 0.0 | 692 |
| Msa0124000 | AT5G46070.1 | 26.503 | 449 | 277 | 17 | 36 | 450 | 52 | 481 | 4.57e-31 | 129 |
| Msa0124000 | AT1G03830.2 | 33.333 | 114 | 73 | 2 | 36 | 148 | 22 | 133 | 6.18e-11 | 66.2 |
Find 134 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGCTAACCATTGGTATT+TGG | 0.183497 | 1_3:+51402612 | None:intergenic |
| CTTCATTTCTAGACCTATTA+TGG | 0.184112 | 1_3:+51400764 | None:intergenic |
| GGTTCATATCTTCAGGGATA+TGG | 0.198457 | 1_3:-51404394 | Msa0124000:intron |
| GTCTTCCCTTGTACAATCTT+TGG | 0.214786 | 1_3:+51401347 | None:intergenic |
| GTACAAGGGAAGACTTTAAA+TGG | 0.240506 | 1_3:-51401338 | Msa0124000:CDS |
| TTCTTATTGCTTCTGTATAA+AGG | 0.255051 | 1_3:+51399356 | None:intergenic |
| TGGAGTTATGGGAGGAAATA+TGG | 0.274235 | 1_3:-51399395 | Msa0124000:CDS |
| CCAACCAATTGAAAAGTCTT+TGG | 0.275292 | 1_3:+51400088 | None:intergenic |
| GGTGGTGTTCTCCCTGATTA+TGG | 0.277067 | 1_3:-51400067 | Msa0124000:CDS |
| ATCTTCAGGGATATGGGTTT+GGG | 0.296404 | 1_3:-51404387 | Msa0124000:intron |
| GGTGCTAACCATTGGTATTT+GGG | 0.302976 | 1_3:+51402613 | None:intergenic |
| CCGTCTTTCAAGAGAAGGTT+TGG | 0.303690 | 1_3:-51404915 | Msa0124000:CDS |
| GGTTGTTTCTATCAGGTGAT+TGG | 0.306331 | 1_3:-51404702 | Msa0124000:intron |
| TTATCTATTGGTGGAGTTAT+GGG | 0.313121 | 1_3:-51399406 | Msa0124000:CDS |
| ATTATCTATTGGTGGAGTTA+TGG | 0.322724 | 1_3:-51399407 | Msa0124000:CDS |
| TGTCAGTGTTTATTATCTAT+TGG | 0.326880 | 1_3:-51399418 | Msa0124000:CDS |
| TAGTCTGTTCTTTGTCGATT+TGG | 0.335335 | 1_3:+51399329 | None:intergenic |
| AGACCTACACTAAGATGTTT+TGG | 0.339622 | 1_3:-51399972 | Msa0124000:CDS |
| ATCTTATGATATCCAATGTT+TGG | 0.348105 | 1_3:+51399108 | None:intergenic |
| TATCTTCAGGGATATGGGTT+TGG | 0.359310 | 1_3:-51404388 | Msa0124000:intron |
| GCATTCCTTTGTTCAACTTA+GGG | 0.360502 | 1_3:-51399198 | Msa0124000:three_prime_UTR |
| AATCTATGATGTTGTATATG+AGG | 0.360578 | 1_3:-51399306 | Msa0124000:three_prime_UTR |
| CTCTCTCTTTCTTGTTATGA+AGG | 0.364281 | 1_3:-51404639 | Msa0124000:intron |
| TTCTTCAGGTTAATCAGATC+CGG | 0.366789 | 1_3:-51402386 | Msa0124000:intron |
| AATAGTAGACTAGAAGGAAT+AGG | 0.373454 | 1_3:-51405363 | Msa0124000:CDS |
| TCTTGTTTACAACCCAATCT+TGG | 0.374066 | 1_3:-51399890 | Msa0124000:CDS |
| GTCCAATCACAACCATAATC+AGG | 0.380791 | 1_3:+51400055 | None:intergenic |
| ATCTGCAAGGGGTCCATAAT+AGG | 0.389286 | 1_3:-51400777 | Msa0124000:CDS |
| GTCTAGGTCTCAATTTATAA+AGG | 0.392710 | 1_3:-51400118 | Msa0124000:CDS |
| TCCCTGATTATGGTTGTGAT+TGG | 0.394032 | 1_3:-51400057 | Msa0124000:CDS |
| CATCAGATGTGAGGACAAAA+TGG | 0.395664 | 1_3:-51400358 | Msa0124000:CDS |
| CCGGGACTCGCTGGCTATGA+TGG | 0.403209 | 1_3:-51402367 | Msa0124000:CDS |
| TGGAATTTCTCCTTTGTTCA+AGG | 0.405123 | 1_3:+51400906 | None:intergenic |
| CCCATTGTTGAACCGGATCC+TGG | 0.406456 | 1_3:-51404950 | Msa0124000:CDS |
| GTATATGAGGGTATTATCTA+AGG | 0.408291 | 1_3:-51399293 | Msa0124000:three_prime_UTR |
| CTAAAGAATAGTAGACTAGA+AGG | 0.408616 | 1_3:-51405369 | Msa0124000:CDS |
| CAGAAGGATTTGAAAGTGTT+GGG | 0.409163 | 1_3:-51404307 | Msa0124000:CDS |
| GTTCATATCTTCAGGGATAT+GGG | 0.410204 | 1_3:-51404393 | Msa0124000:intron |
| ACCCAATCTTGGATCTTGAT+AGG | 0.419125 | 1_3:-51399879 | Msa0124000:intron |
| GTTGTTTCTATCAGGTGATT+GGG | 0.419388 | 1_3:-51404701 | Msa0124000:intron |
| TTATGCGACACGGATGAATA+AGG | 0.424156 | 1_3:-51400229 | Msa0124000:intron |
| GTGATTGGGCCGCATCGATC+TGG | 0.427064 | 1_3:-51404687 | Msa0124000:CDS |
| TGCATTCCTTTGTTCAACTT+AGG | 0.427524 | 1_3:-51399199 | Msa0124000:three_prime_UTR |
| ACCTATCAAGATCCAAGATT+GGG | 0.435645 | 1_3:+51399878 | None:intergenic |
| TACCTATCAAGATCCAAGAT+TGG | 0.435734 | 1_3:+51399877 | None:intergenic |
| ATGTGAATTATGCAGATGTT+AGG | 0.437999 | 1_3:-51400144 | Msa0124000:intron |
| GGCAGTTTATAGTTGCAACT+TGG | 0.443191 | 1_3:-51399918 | Msa0124000:CDS |
| AAAGGAGAAATTCCATCATC+AGG | 0.444665 | 1_3:-51400898 | Msa0124000:CDS |
| ACAGAAGGATTTGAAAGTGT+TGG | 0.445106 | 1_3:-51404308 | Msa0124000:CDS |
| TGTATAAAGGTAATAGCCAC+TGG | 0.447081 | 1_3:+51399369 | None:intergenic |
| ATGAGCCACAAGAGCTTAGC+TGG | 0.450263 | 1_3:+51403101 | None:intergenic |
| TTTCAAATCCTTCTGTATCA+AGG | 0.451129 | 1_3:+51404315 | None:intergenic |
| ATTTGTCTCTTTCCTAGAGC+AGG | 0.452821 | 1_3:-51401309 | Msa0124000:intron |
| AGTTCTCAGACTTCCTTCCT+TGG | 0.453232 | 1_3:-51400325 | Msa0124000:CDS |
| AGACATTATCTAACCGTCTC+AGG | 0.462018 | 1_3:+51404124 | None:intergenic |
| CCATTGATATCTAACTCTAT+AGG | 0.466716 | 1_3:+51404359 | None:intergenic |
| CCAGGATCCGGTTCAACAAT+GGG | 0.473920 | 1_3:+51404950 | None:intergenic |
| GTGAAAATTAAAGCAATCAA+TGG | 0.474475 | 1_3:-51399175 | Msa0124000:three_prime_UTR |
| TTGAACCAGCTAAGCTCTTG+TGG | 0.474606 | 1_3:-51403106 | Msa0124000:CDS |
| CCTATAGAGTTAGATATCAA+TGG | 0.477737 | 1_3:-51404359 | Msa0124000:CDS |
| AATCTTTGGAGAGATTATAC+TGG | 0.481010 | 1_3:+51401361 | None:intergenic |
| GCAGTTTATAGTTGCAACTT+GGG | 0.483769 | 1_3:-51399917 | Msa0124000:CDS |
| CGGGACTCGCTGGCTATGAT+GGG | 0.485327 | 1_3:-51402366 | Msa0124000:CDS |
| CATACAGCCACAGATGCAAT+GGG | 0.489499 | 1_3:+51404869 | None:intergenic |
| TACAAGGGAAGACTTTAAAT+GGG | 0.490870 | 1_3:-51401337 | Msa0124000:CDS |
| ATACTTGACGCCTTGAACAA+AGG | 0.491328 | 1_3:-51400916 | Msa0124000:CDS |
| CACTTTACTATAATTCAGCT+TGG | 0.492552 | 1_3:-51399939 | Msa0124000:CDS |
| AGGGAAATCAGTGCAAGAAA+TGG | 0.493954 | 1_3:-51402658 | Msa0124000:CDS |
| ATCTCTCCAAAGATTGTACA+AGG | 0.496328 | 1_3:-51401353 | Msa0124000:CDS |
| ATCATCAGGCTCTCTTGTGG+AGG | 0.507934 | 1_3:-51400884 | Msa0124000:CDS |
| CACTGCCTTTAGTTTACCAC+AGG | 0.508535 | 1_3:-51402334 | Msa0124000:intron |
| TAATCAGATCCGGGACTCGC+TGG | 0.508570 | 1_3:-51402376 | Msa0124000:CDS |
| TCCTTGGCAAAATTTAATGC+AGG | 0.510402 | 1_3:-51400309 | Msa0124000:CDS |
| GTCGCATAATTTGTCTTCGA+AGG | 0.511700 | 1_3:+51400243 | None:intergenic |
| TCTTCAGGTTAATCAGATCC+GGG | 0.512115 | 1_3:-51402385 | Msa0124000:intron |
| TCCACAAGAGAGCCTGATGA+TGG | 0.512715 | 1_3:+51400886 | None:intergenic |
| TGCAGATATTCCTCAGAAAG+AGG | 0.512916 | 1_3:+51400793 | None:intergenic |
| ATCTATGATGTTGTATATGA+GGG | 0.517022 | 1_3:-51399305 | Msa0124000:three_prime_UTR |
| CCATCATAGCCAGCGAGTCC+CGG | 0.517381 | 1_3:+51402367 | None:intergenic |
| CAGTGTTTATTATCTATTGG+TGG | 0.519013 | 1_3:-51399415 | Msa0124000:CDS |
| ATGCGTGATGTCAAGACAAA+AGG | 0.520841 | 1_3:-51404500 | Msa0124000:intron |
| AAACTCCGTCTTTCAAGAGA+AGG | 0.525574 | 1_3:-51404920 | Msa0124000:CDS |
| TTGATTTCTTAGCATGGTGA+TGG | 0.525888 | 1_3:+51400710 | None:intergenic |
| TATTTCTTCATTCAGCTGCA+AGG | 0.526585 | 1_3:+51400687 | None:intergenic |
| CACTGACATAATTACACCAA+GGG | 0.528737 | 1_3:+51399433 | None:intergenic |
| ACACCATCATGGACACATCA+TGG | 0.534512 | 1_3:+51399267 | None:intergenic |
| AACAAACCCCATTGCATCTG+TGG | 0.536433 | 1_3:-51404876 | Msa0124000:CDS |
| GTAATTTACCTTGATACAGA+AGG | 0.536498 | 1_3:-51404323 | Msa0124000:CDS |
| ACATACAGCCACAGATGCAA+TGG | 0.537928 | 1_3:+51404868 | None:intergenic |
| AGAAGCTAAGTACCTGCTCT+AGG | 0.539412 | 1_3:+51401297 | None:intergenic |
| TGTGAATTATGCAGATGTTA+GGG | 0.542191 | 1_3:-51400143 | Msa0124000:intron |
| GCAAGGTTGATTTCTTAGCA+TGG | 0.543080 | 1_3:+51400704 | None:intergenic |
| CATTCCTTTGTTCAACTTAG+GGG | 0.544926 | 1_3:-51399197 | Msa0124000:three_prime_UTR |
| ACATACCTGTGGTAAACTAA+AGG | 0.549025 | 1_3:+51402329 | None:intergenic |
| AAAACAAAATAACCAAACAT+TGG | 0.549901 | 1_3:-51399120 | Msa0124000:three_prime_UTR |
| TCTTTCAAGAGAAGGTTTGG+AGG | 0.549947 | 1_3:-51404912 | Msa0124000:CDS |
| AACAGATGGGCTATACCCCT+TGG | 0.552967 | 1_3:-51399449 | Msa0124000:intron |
| TCCATCATCAGGCTCTCTTG+TGG | 0.554158 | 1_3:-51400887 | Msa0124000:CDS |
| ACCAGGATCCGGTTCAACAA+TGG | 0.557282 | 1_3:+51404949 | None:intergenic |
| TGCAGATGTTAGGGAAGTCT+AGG | 0.561123 | 1_3:-51400134 | Msa0124000:intron |
| ATCAGCTATATGTTACGAGA+AGG | 0.566055 | 1_3:-51401406 | Msa0124000:CDS |
| TTACCGATCATCATATACAT+TGG | 0.566643 | 1_3:+51404280 | None:intergenic |
| TAAGAGAATCCACACCATCA+TGG | 0.567953 | 1_3:+51399256 | None:intergenic |
| TTCACCCCTAAGTTGAACAA+AGG | 0.568590 | 1_3:+51399193 | None:intergenic |
| AGGGAAGACTTTAAATGGGA+AGG | 0.572595 | 1_3:-51401333 | Msa0124000:CDS |
| TGTATATAACTTGCCTGAGA+CGG | 0.573446 | 1_3:-51404137 | Msa0124000:intron |
| ATTGGATCTACCTCTTTCTG+AGG | 0.579896 | 1_3:-51400803 | Msa0124000:CDS |
| CCAAACCTTCTCTTGAAAGA+CGG | 0.581740 | 1_3:+51404915 | None:intergenic |
| TTTCTGAGGAATATCTGCAA+GGG | 0.590444 | 1_3:-51400789 | Msa0124000:CDS |
| TCCAATCACAACCATAATCA+GGG | 0.595468 | 1_3:+51400056 | None:intergenic |
| AGTCCAATGTATATGATGAT+CGG | 0.595943 | 1_3:-51404283 | Msa0124000:intron |
| CTTTCTGAGGAATATCTGCA+AGG | 0.605099 | 1_3:-51400790 | Msa0124000:CDS |
| ATGATGTGTCCATGATGGTG+TGG | 0.606078 | 1_3:-51399265 | Msa0124000:three_prime_UTR |
| CAAAGAGTCCCAAATACCAA+TGG | 0.607239 | 1_3:-51402621 | Msa0124000:intron |
| CTCAACAGCCACATCTTCAG+AGG | 0.607921 | 1_3:-51401463 | Msa0124000:intron |
| AGCTTTGTCCTCTGAAGATG+TGG | 0.610417 | 1_3:+51401455 | None:intergenic |
| TCAGCTATATGTTACGAGAA+GGG | 0.611889 | 1_3:-51401405 | Msa0124000:CDS |
| TAGGATATTCAAATATTGAG+AGG | 0.619683 | 1_3:-51405344 | Msa0124000:intron |
| CTGCCGTATGAACAGGGTGA+AGG | 0.622038 | 1_3:-51403265 | Msa0124000:intron |
| TCTATTGGTGGAGTTATGGG+AGG | 0.626756 | 1_3:-51399403 | Msa0124000:CDS |
| TGTCCATGATGTGTCCATGA+TGG | 0.633080 | 1_3:-51399270 | Msa0124000:three_prime_UTR |
| TTCTGAGGAATATCTGCAAG+GGG | 0.635807 | 1_3:-51400788 | Msa0124000:CDS |
| TGACCAAAACATCTTAGTGT+AGG | 0.638635 | 1_3:+51399969 | None:intergenic |
| TCTTCAGGGATATGGGTTTG+GGG | 0.657175 | 1_3:-51404386 | Msa0124000:intron |
| ACACTGACATAATTACACCA+AGG | 0.658135 | 1_3:+51399432 | None:intergenic |
| GTATAAAGGTAATAGCCACT+GGG | 0.660242 | 1_3:+51399370 | None:intergenic |
| CGAAGACAAATTATGCGACA+CGG | 0.664350 | 1_3:-51400239 | Msa0124000:CDS |
| TCAATCTTCAAAACTCTGTG+AGG | 0.670636 | 1_3:-51400388 | Msa0124000:CDS |
| GGGACTCGCTGGCTATGATG+GGG | 0.675333 | 1_3:-51402365 | Msa0124000:CDS |
| GGCAATGTACATCAGATGTG+AGG | 0.676784 | 1_3:-51400367 | Msa0124000:CDS |
| ACTGACATAATTACACCAAG+GGG | 0.695219 | 1_3:+51399434 | None:intergenic |
| TCTCTCCAAAGATTGTACAA+GGG | 0.713949 | 1_3:-51401352 | Msa0124000:CDS |
| GGAGGAAATATGGATCCCAG+TGG | 0.763500 | 1_3:-51399385 | Msa0124000:CDS |
| ATACAGCCACAGATGCAATG+GGG | 0.781937 | 1_3:+51404870 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATTTGTTTGAATA+TGG | - | chr1_3:51399271-51399290 | Msa0124000:three_prime_UTR | 10.0% |
| !!! | TAATCATTTTTATTATCTTT+TGG | - | chr1_3:51400080-51400099 | Msa0124000:CDS | 10.0% |
| !!! | AATTTTTTATTGAAAAAATG+AGG | + | chr1_3:51400961-51400980 | None:intergenic | 10.0% |
| !! | AGTTATATTAAGAAAAAATA+TGG | + | chr1_3:51404758-51404777 | None:intergenic | 10.0% |
| !!! | ATTTATTTACATGATTTTTT+TGG | - | chr1_3:51405016-51405035 | Msa0124000:intron | 10.0% |
| !! | TTACACTTTAAATTCTAATT+TGG | - | chr1_3:51402222-51402241 | Msa0124000:intron | 15.0% |
| !!! | TTTTGAAATAAATATGATTC+TGG | + | chr1_3:51402345-51402364 | None:intergenic | 15.0% |
| !!! | AAAATATCCGAATTTTATAA+AGG | + | chr1_3:51403273-51403292 | None:intergenic | 15.0% |
| !!! | AAGTACTAACTAATTTTAAT+TGG | + | chr1_3:51403497-51403516 | None:intergenic | 15.0% |
| !! | ATTAAAATTAGTTAGTACTT+TGG | - | chr1_3:51403497-51403516 | Msa0124000:intron | 15.0% |
| !!! | TCAAAATCATATTAGTTTAT+TGG | + | chr1_3:51403545-51403564 | None:intergenic | 15.0% |
| !!! | AACTTTTGCTAATATATTTT+AGG | + | chr1_3:51403910-51403929 | None:intergenic | 15.0% |
| !! | ACTAAATCTTGAAATATAAT+TGG | + | chr1_3:51404027-51404046 | None:intergenic | 15.0% |
| !!! | AGATTTAGTAATAATTTTTC+TGG | - | chr1_3:51404038-51404057 | Msa0124000:intron | 15.0% |
| !!! | GATTTAGTAATAATTTTTCT+GGG | - | chr1_3:51404039-51404058 | Msa0124000:intron | 15.0% |
| !!! | ATTTAGTAATAATTTTTCTG+GGG | - | chr1_3:51404040-51404059 | Msa0124000:intron | 15.0% |
| !! | AACTATTAAGAGATATTTAG+AGG | - | chr1_3:51399204-51399223 | Msa0124000:three_prime_UTR | 20.0% |
| !! | TATTATTCTATTCTGAATTG+TGG | - | chr1_3:51399391-51399410 | Msa0124000:CDS | 20.0% |
| !!! | AATTTAACGTTGATAAACAT+TGG | - | chr1_3:51399765-51399784 | Msa0124000:intron | 20.0% |
| !!! | GAAATGTGTTTTTTTTTGTT+AGG | - | chr1_3:51399956-51399975 | Msa0124000:CDS | 20.0% |
| !!! | TGTTTTTTTTTGTTAGGATT+TGG | - | chr1_3:51399962-51399981 | Msa0124000:CDS | 20.0% |
| !! | ACATTATATTATACTCAACA+AGG | + | chr1_3:51400497-51400516 | None:intergenic | 20.0% |
| !! | TGTTGAGTATAATATAATGT+TGG | - | chr1_3:51400497-51400516 | Msa0124000:intron | 20.0% |
| !! | ATTCGAGTAAATCTATTAAA+AGG | + | chr1_3:51400711-51400730 | None:intergenic | 20.0% |
| !! | AGAAATAAAGATTAGATCAA+TGG | + | chr1_3:51401281-51401300 | None:intergenic | 20.0% |
| !!! | GTTGATTTTGTTTGAATATA+TGG | - | chr1_3:51401339-51401358 | Msa0124000:CDS | 20.0% |
| !!! | TGAATATATGGATATTTTGT+AGG | - | chr1_3:51401351-51401370 | Msa0124000:CDS | 20.0% |
| !!! | GAATATATGGATATTTTGTA+GGG | - | chr1_3:51401352-51401371 | Msa0124000:CDS | 20.0% |
| !! | TATTGAATATTGATAGAAAC+TGG | - | chr1_3:51401591-51401610 | Msa0124000:intron | 20.0% |
| !! | TGAATAAATAGTGAAATAGA+AGG | + | chr1_3:51401717-51401736 | None:intergenic | 20.0% |
| !! | TTTAAAAAACATGGAAAAGT+AGG | + | chr1_3:51401945-51401964 | None:intergenic | 20.0% |
| !!! | TGAAAAGGAATTCAATATTT+TGG | + | chr1_3:51402198-51402217 | None:intergenic | 20.0% |
| !! | TTAAAGTGTAAGAAATGAAA+AGG | + | chr1_3:51402213-51402232 | None:intergenic | 20.0% |
| !! | TCTAATTTGGATTTCTTTAT+CGG | - | chr1_3:51402235-51402254 | Msa0124000:intron | 20.0% |
| !!! | CATTTGAAATGATATGAAAA+TGG | - | chr1_3:51402305-51402324 | Msa0124000:intron | 20.0% |
| !! | ATTAGAATTGAAAAGTCAAT+AGG | + | chr1_3:51402473-51402492 | None:intergenic | 20.0% |
| !! | TCAATTCTAATGTCAAAATT+TGG | - | chr1_3:51402482-51402501 | Msa0124000:intron | 20.0% |
| !! | CAATTCTAATGTCAAAATTT+GGG | - | chr1_3:51402483-51402502 | Msa0124000:intron | 20.0% |
| !! | TGCTTAATTGTAAATTGTAT+TGG | + | chr1_3:51402582-51402601 | None:intergenic | 20.0% |
| !! | TATAATACTTATGAGATAAG+CGG | + | chr1_3:51403296-51403315 | None:intergenic | 20.0% |
| !! | TGAAAGCTGAAAAATATAAT+TGG | - | chr1_3:51403862-51403881 | Msa0124000:intron | 20.0% |
| !!! | ATCAAAATATCTTTGATTTG+AGG | + | chr1_3:51403946-51403965 | None:intergenic | 20.0% |
| !!! | TCAAATCAAAGATATTTTGA+TGG | - | chr1_3:51403945-51403964 | Msa0124000:intron | 20.0% |
| !!! | AAGTTCATTTTGATTGAAAT+TGG | - | chr1_3:51404474-51404493 | Msa0124000:intron | 20.0% |
| !! | ATGTAAATAAATACTAAGCA+TGG | + | chr1_3:51405008-51405027 | None:intergenic | 20.0% |
| !! | AAAACAAAATAACCAAACAT+TGG | - | chr1_3:51405375-51405394 | Msa0124000:CDS | 20.0% |
| ! | TAGGATATTCAAATATTGAG+AGG | - | chr1_3:51399151-51399170 | Msa0124000:three_prime_UTR | 25.0% |
| !! | GTTTGTTCTCTAATTTTCAT+TGG | + | chr1_3:51399187-51399206 | None:intergenic | 25.0% |
| !! | CTATTGTTGTTATGATTTGT+TGG | - | chr1_3:51399328-51399347 | Msa0124000:CDS | 25.0% |
| !!! | TGTCAAGTGCATTTTATTTT+TGG | - | chr1_3:51399466-51399485 | Msa0124000:intron | 25.0% |
| !!! | TCACAAATTTGTTATGATGA+TGG | - | chr1_3:51399716-51399735 | Msa0124000:intron | 25.0% |
| !!! | CACAAATTTGTTATGATGAT+GGG | - | chr1_3:51399717-51399736 | Msa0124000:intron | 25.0% |
| !!! | CTCTCTGTTTTAAATGATTT+AGG | - | chr1_3:51399931-51399950 | Msa0124000:CDS | 25.0% |
| !!! | TTTATTTCTTTTACTTTCGC+AGG | - | chr1_3:51400300-51400319 | Msa0124000:CDS | 25.0% |
| ! | GCAATGAACATGAAAATTAA+GGG | + | chr1_3:51400401-51400420 | None:intergenic | 25.0% |
| !! | TTAATTTTCATGTTCATTGC+CGG | - | chr1_3:51400401-51400420 | Msa0124000:CDS | 25.0% |
| ! | TTATCTTGTTGCAATGTTAA+AGG | - | chr1_3:51400427-51400446 | Msa0124000:intron | 25.0% |
| ! | ATTACTCAATCTCAAAATGA+AGG | + | chr1_3:51400453-51400472 | None:intergenic | 25.0% |
| ! | AACAAAAGAACTTAGAAAGA+TGG | - | chr1_3:51400591-51400610 | Msa0124000:intron | 25.0% |
| ! | ACAAAAGAACTTAGAAAGAT+GGG | - | chr1_3:51400592-51400611 | Msa0124000:intron | 25.0% |
| !!! | TGCCAATTATTTAGAGTTTT+GGG | + | chr1_3:51400800-51400819 | None:intergenic | 25.0% |
| ! | ATAATTGGCACAAATTATGA+TGG | - | chr1_3:51400810-51400829 | Msa0124000:CDS | 25.0% |
| !!! | AATTATGATGGATTGGTTTT+AGG | - | chr1_3:51400822-51400841 | Msa0124000:CDS | 25.0% |
| ! | GACTTTGAATTACTTGATTT+GGG | - | chr1_3:51400918-51400937 | Msa0124000:CDS | 25.0% |
| ! | ATTCAAACAAAATCAACCTA+TGG | + | chr1_3:51401336-51401355 | None:intergenic | 25.0% |
| ! | AAGATTTCAAATTCTTGGAA+GGG | + | chr1_3:51401645-51401664 | None:intergenic | 25.0% |
| ! | ATTGGGACTAGATATTAATT+AGG | + | chr1_3:51401675-51401694 | None:intergenic | 25.0% |
| !!! | ATCGTTTGCTTTAAAAAACA+TGG | + | chr1_3:51401954-51401973 | None:intergenic | 25.0% |
| ! | TTCATATTCTATTTAACTGC+AGG | - | chr1_3:51401984-51402003 | Msa0124000:intron | 25.0% |
| ! | TACTGAAAGTTAATTTCTTC+AGG | - | chr1_3:51402095-51402114 | Msa0124000:intron | 25.0% |
| ! | CTAATTTGGATTTCTTTATC+GGG | - | chr1_3:51402236-51402255 | Msa0124000:intron | 25.0% |
| ! | AACTGAATTTATTTACAACC+AGG | + | chr1_3:51402279-51402298 | None:intergenic | 25.0% |
| ! | CATTATGTGAATACATAGAT+CGG | + | chr1_3:51402917-51402936 | None:intergenic | 25.0% |
| ! | TTTGTGTTAAAACAATGCAT+TGG | - | chr1_3:51402987-51403006 | Msa0124000:intron | 25.0% |
| ! | CAAGTTATACAGTGAAAAAA+TGG | - | chr1_3:51403665-51403684 | Msa0124000:intron | 25.0% |
| ! | GCTGAATGAAGAAATAAAAA+AGG | - | chr1_3:51403815-51403834 | Msa0124000:intron | 25.0% |
| !!! | TTGATGGTTTTAGTTAAGTA+TGG | - | chr1_3:51403961-51403980 | Msa0124000:intron | 25.0% |
| ! | TCAACAAGATGACTATATAA+AGG | + | chr1_3:51403992-51404011 | None:intergenic | 25.0% |
| ! | TTATATAGTCATCTTGTTGA+TGG | - | chr1_3:51403992-51404011 | Msa0124000:intron | 25.0% |
| !! | ATGGATCCTGTTTATATTTT+TGG | - | chr1_3:51404500-51404519 | Msa0124000:intron | 25.0% |
| ! | AAGCATGAACATGAATAATT+TGG | + | chr1_3:51404657-51404676 | None:intergenic | 25.0% |
| ! | TAACTACTCGTTATATATTC+TGG | - | chr1_3:51404949-51404968 | Msa0124000:CDS | 25.0% |
| ! | AACTACTCGTTATATATTCT+GGG | - | chr1_3:51404950-51404969 | Msa0124000:CDS | 25.0% |
| ! | AAGCATGGATAAGTTAATTA+GGG | + | chr1_3:51404993-51405012 | None:intergenic | 25.0% |
| ! | TAAGCATGGATAAGTTAATT+AGG | + | chr1_3:51404994-51405013 | None:intergenic | 25.0% |
| ! | TGTCAGTGTTTATTATCTAT+TGG | - | chr1_3:51405077-51405096 | Msa0124000:intron | 25.0% |
| ! | TTCTTATTGCTTCTGTATAA+AGG | + | chr1_3:51405142-51405161 | None:intergenic | 25.0% |
| ! | AATCTATGATGTTGTATATG+AGG | - | chr1_3:51405189-51405208 | Msa0124000:intron | 25.0% |
| ! | ATCTATGATGTTGTATATGA+GGG | - | chr1_3:51405190-51405209 | Msa0124000:intron | 25.0% |
| ! | GTGAAAATTAAAGCAATCAA+TGG | - | chr1_3:51405320-51405339 | Msa0124000:intron | 25.0% |
| !!! | TGGTTATTTTGTTTTGTTCA+TGG | + | chr1_3:51405370-51405389 | None:intergenic | 25.0% |
| ! | ATCTTATGATATCCAATGTT+TGG | + | chr1_3:51405390-51405409 | None:intergenic | 25.0% |
| CTAAAGAATAGTAGACTAGA+AGG | - | chr1_3:51399126-51399145 | Msa0124000:three_prime_UTR | 30.0% | |
| AATAGTAGACTAGAAGGAAT+AGG | - | chr1_3:51399132-51399151 | Msa0124000:three_prime_UTR | 30.0% | |
| ! | GACAACAAACTTTAGAAACT+CGG | + | chr1_3:51399450-51399469 | None:intergenic | 30.0% |
| AAACTGTACAAAACAGAAAC+AGG | + | chr1_3:51399524-51399543 | None:intergenic | 30.0% | |
| ! | CATGCATTGTCTATAACTTT+TGG | - | chr1_3:51399668-51399687 | Msa0124000:intron | 30.0% |
| !! | CGTTGATAAACATTGGTTTA+TGG | - | chr1_3:51399772-51399791 | Msa0124000:intron | 30.0% |
| ! | ATACACTCAACATGCATTTT+AGG | - | chr1_3:51399903-51399922 | Msa0124000:CDS | 30.0% |
| ! | TACACTCAACATGCATTTTA+GGG | - | chr1_3:51399904-51399923 | Msa0124000:CDS | 30.0% |
| !!! | TTTTTGTTAGGATTTGGTGT+TGG | - | chr1_3:51399968-51399987 | Msa0124000:CDS | 30.0% |
| !!! | TTTTGTTAGGATTTGGTGTT+GGG | - | chr1_3:51399969-51399988 | Msa0124000:CDS | 30.0% |
| !!! | ATCTTTTGGTTCATATCTTC+AGG | - | chr1_3:51400094-51400113 | Msa0124000:CDS | 30.0% |
| !!! | TCTTTTGGTTCATATCTTCA+GGG | - | chr1_3:51400095-51400114 | Msa0124000:CDS | 30.0% |
| CCATTGATATCTAACTCTAT+AGG | + | chr1_3:51400139-51400158 | None:intergenic | 30.0% | |
| CCTATAGAGTTAGATATCAA+TGG | - | chr1_3:51400136-51400155 | Msa0124000:intron | 30.0% | |
| GTAATTTACCTTGATACAGA+AGG | - | chr1_3:51400172-51400191 | Msa0124000:intron | 30.0% | |
| TTTCAAATCCTTCTGTATCA+AGG | + | chr1_3:51400183-51400202 | None:intergenic | 30.0% | |
| AGTCCAATGTATATGATGAT+CGG | - | chr1_3:51400212-51400231 | Msa0124000:intron | 30.0% | |
| TTACCGATCATCATATACAT+TGG | + | chr1_3:51400218-51400237 | None:intergenic | 30.0% | |
| GTTCTTTGTTGAATCATGTA+TGG | - | chr1_3:51400262-51400281 | Msa0124000:CDS | 30.0% | |
| !! | ATCATGTATGGTTTTTCAGT+TGG | - | chr1_3:51400274-51400293 | Msa0124000:CDS | 30.0% |
| ATGAACATGAAAATTAAGGG+AGG | + | chr1_3:51400398-51400417 | None:intergenic | 30.0% | |
| GGCAATGAACATGAAAATTA+AGG | + | chr1_3:51400402-51400421 | None:intergenic | 30.0% | |
| TTCATATGGCATGTATACAT+TGG | - | chr1_3:51400528-51400547 | Msa0124000:intron | 30.0% | |
| TATATGTAGTCCATGATATG+TGG | - | chr1_3:51400660-51400679 | Msa0124000:intron | 30.0% | |
| GTCCCAAAACTCTAAATAAT+TGG | - | chr1_3:51400795-51400814 | Msa0124000:CDS | 30.0% | |
| !! | GTGCCAATTATTTAGAGTTT+TGG | + | chr1_3:51400801-51400820 | None:intergenic | 30.0% |
| CGACTTTGAATTACTTGATT+TGG | - | chr1_3:51400917-51400936 | Msa0124000:CDS | 30.0% | |
| ! | CAGATGAAAACATTTGAGAT+TGG | + | chr1_3:51400987-51401006 | None:intergenic | 30.0% |
| ! | TATTTTGTAGGGAAATGATG+TGG | - | chr1_3:51401363-51401382 | Msa0124000:CDS | 30.0% |
| TAATGAAGACTAAAGAATCC+CGG | + | chr1_3:51401519-51401538 | None:intergenic | 30.0% | |
| CATTGATCGAGACATTTAAA+GGG | + | chr1_3:51401548-51401567 | None:intergenic | 30.0% | |
| TCATTGATCGAGACATTTAA+AGG | + | chr1_3:51401549-51401568 | None:intergenic | 30.0% | |
| CTCGATCAATGATGATTTAT+AGG | - | chr1_3:51401557-51401576 | Msa0124000:intron | 30.0% | |
| CAATATTCAATAAGTTGCAG+TGG | + | chr1_3:51401583-51401602 | None:intergenic | 30.0% | |
| ! | TACCGAAATTTGAGAGTTTT+GGG | - | chr1_3:51401614-51401633 | Msa0124000:intron | 30.0% |
| CAAGATTTCAAATTCTTGGA+AGG | + | chr1_3:51401646-51401665 | None:intergenic | 30.0% | |
| ! | CTTCCAAGAATTTGAAATCT+TGG | - | chr1_3:51401644-51401663 | Msa0124000:intron | 30.0% |
| AGACCAAGATTTCAAATTCT+TGG | + | chr1_3:51401650-51401669 | None:intergenic | 30.0% | |
| AAGTCAGCATGCAATTAATT+GGG | + | chr1_3:51401692-51401711 | None:intergenic | 30.0% | |
| AAAGTCAGCATGCAATTAAT+TGG | + | chr1_3:51401693-51401712 | None:intergenic | 30.0% | |
| ATTAGGCAACAGTTACTATT+AGG | + | chr1_3:51401747-51401766 | None:intergenic | 30.0% | |
| TATCAGTCGTTATTATGTTG+CGG | + | chr1_3:51401780-51401799 | None:intergenic | 30.0% | |
| TTATCTTAATCGTCTACAGA+AGG | - | chr1_3:51401817-51401836 | Msa0124000:intron | 30.0% | |
| TATCTTAATCGTCTACAGAA+GGG | - | chr1_3:51401818-51401837 | Msa0124000:intron | 30.0% | |
| !!! | TTTTAAAGCAAACGATCTGA+AGG | - | chr1_3:51401958-51401977 | Msa0124000:intron | 30.0% |
| ! | AGGAGACAAAAATATTGACT+TGG | - | chr1_3:51402004-51402023 | Msa0124000:intron | 30.0% |
| AGCAAAAGTTCACTGATAAT+TGG | + | chr1_3:51402055-51402074 | None:intergenic | 30.0% | |
| !!! | AGAAGTCTTTTGACTTCTTT+AGG | - | chr1_3:51402439-51402458 | Msa0124000:intron | 30.0% |
| ACACATGTCTTACAATATGA+AGG | + | chr1_3:51402606-51402625 | None:intergenic | 30.0% | |
| AGAGTTAAGCAATAAACAAC+AGG | + | chr1_3:51402669-51402688 | None:intergenic | 30.0% | |
| ATTTGAGAAATACTGTTGAC+AGG | - | chr1_3:51402691-51402710 | Msa0124000:intron | 30.0% | |
| !! | TCAAAGATTTGAGTTGAACA+AGG | + | chr1_3:51402755-51402774 | None:intergenic | 30.0% |
| ATGAAATGACTCTTGAATTC+AGG | + | chr1_3:51402836-51402855 | None:intergenic | 30.0% | |
| TGAATTCAAGAGTCATTTCA+TGG | - | chr1_3:51402835-51402854 | Msa0124000:intron | 30.0% | |
| ! | AATCTTTGGAGAGATTATAC+TGG | + | chr1_3:51403137-51403156 | None:intergenic | 30.0% |
| TACAAGGGAAGACTTTAAAT+GGG | - | chr1_3:51403158-51403177 | Msa0124000:intron | 30.0% | |
| ! | AATTTTATAAAGGTCCTCTG+AGG | + | chr1_3:51403263-51403282 | None:intergenic | 30.0% |
| CAGAGGACCTTTATAAAATT+CGG | - | chr1_3:51403263-51403282 | Msa0124000:intron | 30.0% | |
| ! | CTTCATTTCTAGACCTATTA+TGG | + | chr1_3:51403734-51403753 | None:intergenic | 30.0% |
| TCAAACTCCATGAAGTAAAA+TGG | - | chr1_3:51404328-51404347 | Msa0124000:CDS | 30.0% | |
| ! | TTCACATCCATTTTACTTCA+TGG | + | chr1_3:51404338-51404357 | None:intergenic | 30.0% |
| ATGTGAATTATGCAGATGTT+AGG | - | chr1_3:51404351-51404370 | Msa0124000:CDS | 30.0% | |
| TGTGAATTATGCAGATGTTA+GGG | - | chr1_3:51404352-51404371 | Msa0124000:CDS | 30.0% | |
| GTCTAGGTCTCAATTTATAA+AGG | - | chr1_3:51404377-51404396 | Msa0124000:CDS | 30.0% | |
| ! | ACAACCAAAGACTTTTCAAT+TGG | - | chr1_3:51404403-51404422 | Msa0124000:intron | 30.0% |
| !! | TTTTGATTGAAATTGGAGCA+TGG | - | chr1_3:51404481-51404500 | Msa0124000:intron | 30.0% |
| AGGTCTCCAAAAATATAAAC+AGG | + | chr1_3:51404509-51404528 | None:intergenic | 30.0% | |
| CACTTTACTATAATTCAGCT+TGG | - | chr1_3:51404556-51404575 | Msa0124000:intron | 30.0% | |
| !! | TTTTTGGTGATTGAAACAGA+TGG | - | chr1_3:51405032-51405051 | Msa0124000:intron | 30.0% |
| !! | TTTTGGTGATTGAAACAGAT+GGG | - | chr1_3:51405033-51405052 | Msa0124000:intron | 30.0% |
| CAGTGTTTATTATCTATTGG+TGG | - | chr1_3:51405080-51405099 | Msa0124000:intron | 30.0% | |
| ATTATCTATTGGTGGAGTTA+TGG | - | chr1_3:51405088-51405107 | Msa0124000:intron | 30.0% | |
| TTATCTATTGGTGGAGTTAT+GGG | - | chr1_3:51405089-51405108 | Msa0124000:intron | 30.0% | |
| !! | GTATATGAGGGTATTATCTA+AGG | - | chr1_3:51405202-51405221 | Msa0124000:intron | 30.0% |
| CACATGTTGACACTAGAATT+AGG | + | chr1_3:51399247-51399266 | None:intergenic | 35.0% | |
| GCCAACTCAATCAATAGTTT+GGG | - | chr1_3:51399293-51399312 | Msa0124000:three_prime_UTR | 35.0% | |
| ! | TCCCAAACTATTGATTGAGT+TGG | + | chr1_3:51399297-51399316 | None:intergenic | 35.0% |
| !! | TTATGATTTGTTGGCGTAGT+TGG | - | chr1_3:51399337-51399356 | Msa0124000:CDS | 35.0% |
| !! | GGTTTATGGTTGTTTCTATC+AGG | - | chr1_3:51399786-51399805 | Msa0124000:intron | 35.0% |
| !! | GTTGTTTCTATCAGGTGATT+GGG | - | chr1_3:51399794-51399813 | Msa0124000:intron | 35.0% |
| ! | AAAGATTTTCCAGATCGATG+CGG | + | chr1_3:51399820-51399839 | None:intergenic | 35.0% |
| ! | CTCTCTCTTTCTTGTTATGA+AGG | - | chr1_3:51399856-51399875 | Msa0124000:intron | 35.0% |
| GACAAAAGGTGGATGAAAAT+TGG | - | chr1_3:51400009-51400028 | Msa0124000:CDS | 35.0% | |
| GTTCATATCTTCAGGGATAT+GGG | - | chr1_3:51400102-51400121 | Msa0124000:CDS | 35.0% | |
| ! | ACAGAAGGATTTGAAAGTGT+TGG | - | chr1_3:51400187-51400206 | Msa0124000:intron | 35.0% |
| !! | CAGAAGGATTTGAAAGTGTT+GGG | - | chr1_3:51400188-51400207 | Msa0124000:intron | 35.0% |
| ACACAGAATGCATGATTCTT+CGG | + | chr1_3:51400244-51400263 | None:intergenic | 35.0% | |
| ! | TGTATATAACTTGCCTGAGA+CGG | - | chr1_3:51400358-51400377 | Msa0124000:CDS | 35.0% |
| CATTGCAACAAGATAAACAC+CGG | + | chr1_3:51400423-51400442 | None:intergenic | 35.0% | |
| !! | TGTTGGTTTCTGACTTCATA+TGG | - | chr1_3:51400514-51400533 | Msa0124000:intron | 35.0% |
| ACAACTAATGCCACATATCA+TGG | + | chr1_3:51400673-51400692 | None:intergenic | 35.0% | |
| ! | ATGTGGCATTAGTTGTTGTT+AGG | - | chr1_3:51400677-51400696 | Msa0124000:intron | 35.0% |
| ! | TGTGGCATTAGTTGTTGTTA+GGG | - | chr1_3:51400678-51400697 | Msa0124000:intron | 35.0% |
| ! | TTAGTTGTTGTTAGGGTGAT+AGG | - | chr1_3:51400685-51400704 | Msa0124000:CDS | 35.0% |
| TTACTCGAATTTCCAATCAC+CGG | - | chr1_3:51400721-51400740 | Msa0124000:CDS | 35.0% | |
| !! | TGGCACAAATTATGATGGAT+TGG | - | chr1_3:51400815-51400834 | Msa0124000:CDS | 35.0% |
| AAATACACCTGAGCACAAAT+TGG | - | chr1_3:51400849-51400868 | Msa0124000:CDS | 35.0% | |
| AAGAAAACCAATTTGTGCTC+AGG | + | chr1_3:51400859-51400878 | None:intergenic | 35.0% | |
| !!! | GAGCTTGCTGAAGAATTTTA+CGG | - | chr1_3:51401052-51401071 | Msa0124000:intron | 35.0% |
| !!! | AGCTTGCTGAAGAATTTTAC+GGG | - | chr1_3:51401053-51401072 | Msa0124000:intron | 35.0% |
| ! | TTGTGAAACCTCTTCCTTTT+AGG | - | chr1_3:51401151-51401170 | Msa0124000:intron | 35.0% |
| ! | TGTGAAACCTCTTCCTTTTA+GGG | - | chr1_3:51401152-51401171 | Msa0124000:intron | 35.0% |
| !! | TTCCTTTTAGGGATACACAA+TGG | - | chr1_3:51401163-51401182 | Msa0124000:intron | 35.0% |
| AACCATTGTGTATCCCTAAA+AGG | + | chr1_3:51401168-51401187 | None:intergenic | 35.0% | |
| GATCAATGGAGACAATATTC+AGG | + | chr1_3:51401267-51401286 | None:intergenic | 35.0% | |
| AACGTAAAATTGTCGTCCAT+AGG | - | chr1_3:51401317-51401336 | Msa0124000:CDS | 35.0% | |
| AATGAAGACTAAAGAATCCC+GGG | + | chr1_3:51401518-51401537 | None:intergenic | 35.0% | |
| ! | GTACCGAAATTTGAGAGTTT+TGG | - | chr1_3:51401613-51401632 | Msa0124000:intron | 35.0% |
| GACCCAAAACTCTCAAATTT+CGG | + | chr1_3:51401619-51401638 | None:intergenic | 35.0% | |
| GTTGCGGTTACTATGTTATT+AGG | + | chr1_3:51401764-51401783 | None:intergenic | 35.0% | |
| !!! | TCAGTGAACTTTTGCTATTC+TGG | - | chr1_3:51402059-51402078 | Msa0124000:intron | 35.0% |
| ! | TTCTTCAGGTTAATCAGATC+CGG | - | chr1_3:51402109-51402128 | Msa0124000:intron | 35.0% |
| ACATACCTGTGGTAAACTAA+AGG | + | chr1_3:51402169-51402188 | None:intergenic | 35.0% | |
| TTATCGGGAATTCTGTTATG+TGG | - | chr1_3:51402251-51402270 | Msa0124000:intron | 35.0% | |
| AAAACCACCAAGGAAACATA+TGG | + | chr1_3:51402402-51402421 | None:intergenic | 35.0% | |
| TCAAAAGACTTCTGCTATGA+CGG | + | chr1_3:51402432-51402451 | None:intergenic | 35.0% | |
| !!! | AGTCTTTTGACTTCTTTAGG+AGG | - | chr1_3:51402442-51402461 | Msa0124000:intron | 35.0% |
| GTAAGACATGTGTCCTAATT+TGG | - | chr1_3:51402613-51402632 | Msa0124000:intron | 35.0% | |
| AAAAGGTTCTGTGCCAAATT+AGG | + | chr1_3:51402629-51402648 | None:intergenic | 35.0% | |
| GAAATACTGTTGACAGGTTA+AGG | - | chr1_3:51402697-51402716 | Msa0124000:intron | 35.0% | |
| ACACCTTTAATCCACTTTCT+TGG | - | chr1_3:51402881-51402900 | Msa0124000:intron | 35.0% | |
| !! | ATGCCAAGAAAGTGGATTAA+AGG | + | chr1_3:51402887-51402906 | None:intergenic | 35.0% |
| TTTAATCCACTTTCTTGGCA+TGG | - | chr1_3:51402886-51402905 | Msa0124000:intron | 35.0% | |
| TGGTTGATCAAACTGATCAT+TGG | - | chr1_3:51403007-51403026 | Msa0124000:intron | 35.0% | |
| ATCTCTCCAAAGATTGTACA+AGG | - | chr1_3:51403142-51403161 | Msa0124000:intron | 35.0% | |
| TCTCTCCAAAGATTGTACAA+GGG | - | chr1_3:51403143-51403162 | Msa0124000:intron | 35.0% | |
| GTACAAGGGAAGACTTTAAA+TGG | - | chr1_3:51403157-51403176 | Msa0124000:intron | 35.0% | |
| GCGGTTATAAAGTCAAATTG+AGG | - | chr1_3:51403461-51403480 | Msa0124000:CDS | 35.0% | |
| TGGAATTTCTCCTTTGTTCA+AGG | + | chr1_3:51403592-51403611 | None:intergenic | 35.0% | |
| AAAGGAGAAATTCCATCATC+AGG | - | chr1_3:51403597-51403616 | Msa0124000:intron | 35.0% | |
| CAGTGAAAAAATGGCAACAT+TGG | - | chr1_3:51403674-51403693 | Msa0124000:intron | 35.0% | |
| ! | TTTCTGAGGAATATCTGCAA+GGG | - | chr1_3:51403706-51403725 | Msa0124000:intron | 35.0% |
| ! | GTTTTTGATCAGCAGCATTT+TGG | - | chr1_3:51403762-51403781 | Msa0124000:intron | 35.0% |
| TTGATTTCTTAGCATGGTGA+TGG | + | chr1_3:51403788-51403807 | None:intergenic | 35.0% | |
| TATTTCTTCATTCAGCTGCA+AGG | + | chr1_3:51403811-51403830 | None:intergenic | 35.0% | |
| TCAATCTTCAAAACTCTGTG+AGG | - | chr1_3:51404107-51404126 | Msa0124000:intron | 35.0% | |
| ! | GCATTAAATTTTGCCAAGGA+AGG | + | chr1_3:51404186-51404205 | None:intergenic | 35.0% |
| TCCTTGGCAAAATTTAATGC+AGG | - | chr1_3:51404186-51404205 | Msa0124000:intron | 35.0% | |
| ! | ACCTGCATTAAATTTTGCCA+AGG | + | chr1_3:51404190-51404209 | None:intergenic | 35.0% |
| CCAACCAATTGAAAAGTCTT+TGG | + | chr1_3:51404410-51404429 | None:intergenic | 35.0% | |
| ! | CCAAAGACTTTTCAATTGGT+TGG | - | chr1_3:51404407-51404426 | Msa0124000:intron | 35.0% |
| ! | AAGACTTTTCAATTGGTTGG+TGG | - | chr1_3:51404410-51404429 | Msa0124000:intron | 35.0% |
| TCCAATCACAACCATAATCA+GGG | + | chr1_3:51404442-51404461 | None:intergenic | 35.0% | |
| ! | AGACCTACACTAAGATGTTT+TGG | - | chr1_3:51404523-51404542 | Msa0124000:intron | 35.0% |
| TGACCAAAACATCTTAGTGT+AGG | + | chr1_3:51404529-51404548 | None:intergenic | 35.0% | |
| GCAGTTTATAGTTGCAACTT+GGG | - | chr1_3:51404578-51404597 | Msa0124000:intron | 35.0% | |
| ! | TCTTGTTTACAACCCAATCT+TGG | - | chr1_3:51404605-51404624 | Msa0124000:intron | 35.0% |
| ACCTATCAAGATCCAAGATT+GGG | + | chr1_3:51404620-51404639 | None:intergenic | 35.0% | |
| TACCTATCAAGATCCAAGAT+TGG | + | chr1_3:51404621-51404640 | None:intergenic | 35.0% | |
| CAAAATAGTCTTCGACTCTT+TGG | - | chr1_3:51404786-51404805 | Msa0124000:intron | 35.0% | |
| !!! | TATCTATTTTGACTCCGTCA+AGG | - | chr1_3:51404858-51404877 | Msa0124000:intron | 35.0% |
| CTAGTCAAAATAGTCCTTGA+CGG | + | chr1_3:51404875-51404894 | None:intergenic | 35.0% | |
| !!! | TCAAGGACTATTTTGACTAG+TGG | - | chr1_3:51404875-51404894 | Msa0124000:CDS | 35.0% |
| ACTGACATAATTACACCAAG+GGG | + | chr1_3:51405064-51405083 | None:intergenic | 35.0% | |
| CACTGACATAATTACACCAA+GGG | + | chr1_3:51405065-51405084 | None:intergenic | 35.0% | |
| ACACTGACATAATTACACCA+AGG | + | chr1_3:51405066-51405085 | None:intergenic | 35.0% | |
| GTATAAAGGTAATAGCCACT+GGG | + | chr1_3:51405128-51405147 | None:intergenic | 35.0% | |
| TGTATAAAGGTAATAGCCAC+TGG | + | chr1_3:51405129-51405148 | None:intergenic | 35.0% | |
| ! | TAGTCTGTTCTTTGTCGATT+TGG | + | chr1_3:51405169-51405188 | None:intergenic | 35.0% |
| TGCATTCCTTTGTTCAACTT+AGG | - | chr1_3:51405296-51405315 | Msa0124000:intron | 35.0% | |
| GCATTCCTTTGTTCAACTTA+GGG | - | chr1_3:51405297-51405316 | Msa0124000:intron | 35.0% | |
| CATTCCTTTGTTCAACTTAG+GGG | - | chr1_3:51405298-51405317 | Msa0124000:intron | 35.0% | |
| GGCCAACTCAATCAATAGTT+TGG | - | chr1_3:51399292-51399311 | Msa0124000:three_prime_UTR | 40.0% | |
| AGTGTGTAACAGAAGCAACA+TGG | + | chr1_3:51399371-51399390 | None:intergenic | 40.0% | |
| !!! | TGGTTTTAGTGAGATCCTCT+TGG | - | chr1_3:51399411-51399430 | Msa0124000:CDS | 40.0% |
| !! | GGTTTTAGTGAGATCCTCTT+GGG | - | chr1_3:51399412-51399431 | Msa0124000:CDS | 40.0% |
| ! | CAGTTTTCCCATTGTTGAAC+CGG | - | chr1_3:51399538-51399557 | Msa0124000:intron | 40.0% |
| !! | AGTTTTGTATGACCAGGATC+CGG | + | chr1_3:51399560-51399579 | None:intergenic | 40.0% |
| AAACTCCGTCTTTCAAGAGA+AGG | - | chr1_3:51399575-51399594 | Msa0124000:intron | 40.0% | |
| CCAAACCTTCTCTTGAAAGA+CGG | + | chr1_3:51399583-51399602 | None:intergenic | 40.0% | |
| TCTTTCAAGAGAAGGTTTGG+AGG | - | chr1_3:51399583-51399602 | Msa0124000:intron | 40.0% | |
| !! | GATGATGGGATGTTCTTAGA+CGG | - | chr1_3:51399731-51399750 | Msa0124000:intron | 40.0% |
| !! | GGTTGTTTCTATCAGGTGAT+TGG | - | chr1_3:51399793-51399812 | Msa0124000:intron | 40.0% |
| ATGCGTGATGTCAAGACAAA+AGG | - | chr1_3:51399995-51400014 | Msa0124000:CDS | 40.0% | |
| GGTTCATATCTTCAGGGATA+TGG | - | chr1_3:51400101-51400120 | Msa0124000:CDS | 40.0% | |
| TATCTTCAGGGATATGGGTT+TGG | - | chr1_3:51400107-51400126 | Msa0124000:CDS | 40.0% | |
| ATCTTCAGGGATATGGGTTT+GGG | - | chr1_3:51400108-51400127 | Msa0124000:CDS | 40.0% | |
| AGACATTATCTAACCGTCTC+AGG | + | chr1_3:51400374-51400393 | None:intergenic | 40.0% | |
| ATTTGTTTGCTTCCGGTGAT+TGG | + | chr1_3:51400736-51400755 | None:intergenic | 40.0% | |
| !! | CACGGTAATTTGTTTGCTTC+CGG | + | chr1_3:51400743-51400762 | None:intergenic | 40.0% |
| CAAATTACCGTGGTGTGATA+TGG | - | chr1_3:51400751-51400770 | Msa0124000:CDS | 40.0% | |
| !!! | AGAGTTTTGGGACAACGATA+GGG | + | chr1_3:51400788-51400807 | None:intergenic | 40.0% |
| !!! | TAGAGTTTTGGGACAACGAT+AGG | + | chr1_3:51400789-51400808 | None:intergenic | 40.0% |
| TGAAACTTGACTGCATGTAG+AGG | - | chr1_3:51400883-51400902 | Msa0124000:CDS | 40.0% | |
| ! | TTGCTGAAGAATTTTACGGG+AGG | - | chr1_3:51401056-51401075 | Msa0124000:intron | 40.0% |
| TGTGTATCCCTAAAAGGAAG+AGG | + | chr1_3:51401162-51401181 | None:intergenic | 40.0% | |
| CATACGGCAGTTGCAAATTT+AGG | + | chr1_3:51401220-51401239 | None:intergenic | 40.0% | |
| TTACCTTCACCCTGTTCATA+CGG | + | chr1_3:51401236-51401255 | None:intergenic | 40.0% | |
| TTGAGTCGTGTTCATACTTC+AGG | - | chr1_3:51401462-51401481 | Msa0124000:intron | 40.0% | |
| ATGAAGACTAAAGAATCCCG+GGG | + | chr1_3:51401517-51401536 | None:intergenic | 40.0% | |
| GATCGAGACATTTAAAGGGA+TGG | + | chr1_3:51401544-51401563 | None:intergenic | 40.0% | |
| AGGGAAATCAGTGCAAGAAA+TGG | - | chr1_3:51401837-51401856 | Msa0124000:intron | 40.0% | |
| CAAAGAGTCCCAAATACCAA+TGG | - | chr1_3:51401874-51401893 | Msa0124000:intron | 40.0% | |
| GGTGCTAACCATTGGTATTT+GGG | + | chr1_3:51401885-51401904 | None:intergenic | 40.0% | |
| ! | TGGTGCTAACCATTGGTATT+TGG | + | chr1_3:51401886-51401905 | None:intergenic | 40.0% |
| ! | TCTTCAGGTTAATCAGATCC+GGG | - | chr1_3:51402110-51402129 | Msa0124000:intron | 40.0% |
| TTTGGACTAACACATACCTG+TGG | + | chr1_3:51402180-51402199 | None:intergenic | 40.0% | |
| CAAGGAAACATATGGCAAGT+TGG | + | chr1_3:51402394-51402413 | None:intergenic | 40.0% | |
| CAACTTGCCATATGTTTCCT+TGG | - | chr1_3:51402392-51402411 | Msa0124000:intron | 40.0% | |
| CAACACAACTGGGAAGAAAA+AGG | + | chr1_3:51402646-51402665 | None:intergenic | 40.0% | |
| AAACAACAGGCAACACAACT+GGG | + | chr1_3:51402656-51402675 | None:intergenic | 40.0% | |
| TAAACAACAGGCAACACAAC+TGG | + | chr1_3:51402657-51402676 | None:intergenic | 40.0% | |
| GTCTTCCCTTGTACAATCTT+TGG | + | chr1_3:51403151-51403170 | None:intergenic | 40.0% | |
| AGGGAAGACTTTAAATGGGA+AGG | - | chr1_3:51403162-51403181 | Msa0124000:intron | 40.0% | |
| ATTTGTCTCTTTCCTAGAGC+AGG | - | chr1_3:51403186-51403205 | Msa0124000:intron | 40.0% | |
| ATACTTGACGCCTTGAACAA+AGG | - | chr1_3:51403579-51403598 | Msa0124000:intron | 40.0% | |
| ! | CTTGTGGAGGTTTTCAACAA+AGG | - | chr1_3:51403624-51403643 | Msa0124000:intron | 40.0% |
| ATTGGATCTACCTCTTTCTG+AGG | - | chr1_3:51403692-51403711 | Msa0124000:intron | 40.0% | |
| TGCAGATATTCCTCAGAAAG+AGG | + | chr1_3:51403705-51403724 | None:intergenic | 40.0% | |
| ! | CTTTCTGAGGAATATCTGCA+AGG | - | chr1_3:51403705-51403724 | Msa0124000:intron | 40.0% |
| ! | TTCTGAGGAATATCTGCAAG+GGG | - | chr1_3:51403707-51403726 | Msa0124000:intron | 40.0% |
| ! | GCAAGGTTGATTTCTTAGCA+TGG | + | chr1_3:51403794-51403813 | None:intergenic | 40.0% |
| CATCAGATGTGAGGACAAAA+TGG | - | chr1_3:51404137-51404156 | Msa0124000:intron | 40.0% | |
| !! | AGTTTTGATCGTGAATGCGT+TGG | - | chr1_3:51404228-51404247 | Msa0124000:intron | 40.0% |
| ! | GTCGCATAATTTGTCTTCGA+AGG | + | chr1_3:51404255-51404274 | None:intergenic | 40.0% |
| CGAAGACAAATTATGCGACA+CGG | - | chr1_3:51404256-51404275 | Msa0124000:intron | 40.0% | |
| TTATGCGACACGGATGAATA+AGG | - | chr1_3:51404266-51404285 | Msa0124000:intron | 40.0% | |
| TCCCTGATTATGGTTGTGAT+TGG | - | chr1_3:51404438-51404457 | Msa0124000:intron | 40.0% | |
| GTCCAATCACAACCATAATC+AGG | + | chr1_3:51404443-51404462 | None:intergenic | 40.0% | |
| GGCAGTTTATAGTTGCAACT+TGG | - | chr1_3:51404577-51404596 | Msa0124000:intron | 40.0% | |
| ACCCAATCTTGGATCTTGAT+AGG | - | chr1_3:51404616-51404635 | Msa0124000:intron | 40.0% | |
| TGGAGTTATGGGAGGAAATA+TGG | - | chr1_3:51405100-51405119 | Msa0124000:intron | 40.0% | |
| TAAGAGAATCCACACCATCA+TGG | + | chr1_3:51405242-51405261 | None:intergenic | 40.0% | |
| ! | TTCACCCCTAAGTTGAACAA+AGG | + | chr1_3:51405305-51405324 | None:intergenic | 40.0% |
| ! | ATCCTCTTGGGCATTGTACA+TGG | - | chr1_3:51399424-51399443 | Msa0124000:CDS | 45.0% |
| !! | AGACGGAGTTTTGTATGACC+AGG | + | chr1_3:51399566-51399585 | None:intergenic | 45.0% |
| CCGTCTTTCAAGAGAAGGTT+TGG | - | chr1_3:51399580-51399599 | Msa0124000:intron | 45.0% | |
| AACAAACCCCATTGCATCTG+TGG | - | chr1_3:51399619-51399638 | Msa0124000:intron | 45.0% | |
| ATACAGCCACAGATGCAATG+GGG | + | chr1_3:51399628-51399647 | None:intergenic | 45.0% | |
| CATACAGCCACAGATGCAAT+GGG | + | chr1_3:51399629-51399648 | None:intergenic | 45.0% | |
| ACATACAGCCACAGATGCAA+TGG | + | chr1_3:51399630-51399649 | None:intergenic | 45.0% | |
| CGTGATGTCAAGACAAAAGG+TGG | - | chr1_3:51399998-51400017 | Msa0124000:CDS | 45.0% | |
| TCTTCAGGGATATGGGTTTG+GGG | - | chr1_3:51400109-51400128 | Msa0124000:CDS | 45.0% | |
| GTATACATTGGTCCATGCGA+AGG | - | chr1_3:51400540-51400559 | Msa0124000:intron | 45.0% | |
| CGGAAGCAAACAAATTACCG+TGG | - | chr1_3:51400741-51400760 | Msa0124000:CDS | 45.0% | |
| CTTCTCTCCATATCACACCA+CGG | + | chr1_3:51400761-51400780 | None:intergenic | 45.0% | |
| ! | CATCTCTCGACTCTCTTTTG+CGG | - | chr1_3:51401027-51401046 | Msa0124000:intron | 45.0% |
| TTTGCAACTGCCGTATGAAC+AGG | - | chr1_3:51401223-51401242 | Msa0124000:intron | 45.0% | |
| TTGCAACTGCCGTATGAACA+GGG | - | chr1_3:51401224-51401243 | Msa0124000:intron | 45.0% | |
| AACAGGGTGAAGGTAAGACA+AGG | - | chr1_3:51401240-51401259 | Msa0124000:intron | 45.0% | |
| TTGAACCAGCTAAGCTCTTG+TGG | - | chr1_3:51401389-51401408 | Msa0124000:CDS | 45.0% | |
| TGAAGACTAAAGAATCCCGG+GGG | + | chr1_3:51401516-51401535 | None:intergenic | 45.0% | |
| ! | CGAGAAATGGTGCTAACCAT+TGG | + | chr1_3:51401893-51401912 | None:intergenic | 45.0% |
| !! | TGACTTGGTATCTCCTCTTC+TGG | - | chr1_3:51402019-51402038 | Msa0124000:intron | 45.0% |
| TGGAAGTTGAACTCCAGAAG+AGG | + | chr1_3:51402035-51402054 | None:intergenic | 45.0% | |
| ! | CACTGCCTTTAGTTTACCAC+AGG | - | chr1_3:51402161-51402180 | Msa0124000:intron | 45.0% |
| GAATTCTGTTATGTGGAGCC+TGG | - | chr1_3:51402258-51402277 | Msa0124000:intron | 45.0% | |
| CTTGCCATATGTTTCCTTGG+TGG | - | chr1_3:51402395-51402414 | Msa0124000:intron | 45.0% | |
| AATCCACTTTCTTGGCATGG+TGG | - | chr1_3:51402889-51402908 | Msa0124000:intron | 45.0% | |
| ! | AGCTTTGTCCTCTGAAGATG+TGG | + | chr1_3:51403043-51403062 | None:intergenic | 45.0% |
| AGAAGCTAAGTACCTGCTCT+AGG | + | chr1_3:51403201-51403220 | None:intergenic | 45.0% | |
| TCCTTAACTAACAGCCTCAG+AGG | - | chr1_3:51403246-51403265 | Msa0124000:intron | 45.0% | |
| !! | TCCTCTGAGGCTGTTAGTTA+AGG | + | chr1_3:51403250-51403269 | None:intergenic | 45.0% |
| ATCTGCAAGGGGTCCATAAT+AGG | - | chr1_3:51403718-51403737 | Msa0124000:intron | 45.0% | |
| GGCAATGTACATCAGATGTG+AGG | - | chr1_3:51404128-51404147 | Msa0124000:intron | 45.0% | |
| AGTTCTCAGACTTCCTTCCT+TGG | - | chr1_3:51404170-51404189 | Msa0124000:CDS | 45.0% | |
| TGCAGATGTTAGGGAAGTCT+AGG | - | chr1_3:51404361-51404380 | Msa0124000:CDS | 45.0% | |
| TCTATTGGTGGAGTTATGGG+AGG | - | chr1_3:51405092-51405111 | Msa0124000:intron | 45.0% | |
| TGTCCATGATGTGTCCATGA+TGG | - | chr1_3:51405225-51405244 | Msa0124000:intron | 45.0% | |
| ACACCATCATGGACACATCA+TGG | + | chr1_3:51405231-51405250 | None:intergenic | 45.0% | |
| ! | ATGATGTGTCCATGATGGTG+TGG | - | chr1_3:51405230-51405249 | Msa0124000:intron | 45.0% |
| CCAGGATCCGGTTCAACAAT+GGG | + | chr1_3:51399548-51399567 | None:intergenic | 50.0% | |
| ACCAGGATCCGGTTCAACAA+TGG | + | chr1_3:51399549-51399568 | None:intergenic | 50.0% | |
| ATGCGAAGGTAAAGTGCGCT+CGG | - | chr1_3:51400554-51400573 | Msa0124000:intron | 50.0% | |
| ATGAGCCACAAGAGCTTAGC+TGG | + | chr1_3:51401397-51401416 | None:intergenic | 50.0% | |
| TAGCACCATTTCTCGCGCTT+TGG | - | chr1_3:51401898-51401917 | Msa0124000:intron | 50.0% | |
| TTCGTCCAAAGCGCGAGAAA+TGG | + | chr1_3:51401906-51401925 | None:intergenic | 50.0% | |
| CGGCATGAAGAAAACCACCA+AGG | + | chr1_3:51402412-51402431 | None:intergenic | 50.0% | |
| TTATCACGAGCGATGCAAGC+TGG | + | chr1_3:51402547-51402566 | None:intergenic | 50.0% | |
| CTCAACAGCCACATCTTCAG+AGG | - | chr1_3:51403032-51403051 | Msa0124000:intron | 50.0% | |
| TCCATCATCAGGCTCTCTTG+TGG | - | chr1_3:51403608-51403627 | Msa0124000:intron | 50.0% | |
| TCCACAAGAGAGCCTGATGA+TGG | + | chr1_3:51403612-51403631 | None:intergenic | 50.0% | |
| ATCATCAGGCTCTCTTGTGG+AGG | - | chr1_3:51403611-51403630 | Msa0124000:intron | 50.0% | |
| GGTGGTGTTCTCCCTGATTA+TGG | - | chr1_3:51404428-51404447 | Msa0124000:intron | 50.0% | |
| !! | AACAGATGGGCTATACCCCT+TGG | - | chr1_3:51405046-51405065 | Msa0124000:intron | 50.0% |
| GGAGGAAATATGGATCCCAG+TGG | - | chr1_3:51405110-51405129 | Msa0124000:intron | 50.0% | |
| GGCCATGTACAATGCCCAAG+AGG | + | chr1_3:51399429-51399448 | None:intergenic | 55.0% | |
| CCCATTGTTGAACCGGATCC+TGG | - | chr1_3:51399545-51399564 | Msa0124000:intron | 55.0% | |
| GAGCGCACTTTACCTTCGCA+TGG | + | chr1_3:51400555-51400574 | None:intergenic | 55.0% | |
| GACTGCATGTAGAGGACTGC+TGG | - | chr1_3:51400891-51400910 | Msa0124000:CDS | 55.0% | |
| TACGGGAGGTTTGCATCTGC+TGG | - | chr1_3:51401070-51401089 | Msa0124000:intron | 55.0% | |
| GGAGGTTTGCATCTGCTGGA+TGG | - | chr1_3:51401074-51401093 | Msa0124000:intron | 55.0% | |
| CTGCCGTATGAACAGGGTGA+AGG | - | chr1_3:51401230-51401249 | Msa0124000:intron | 55.0% | |
| TAATCAGATCCGGGACTCGC+TGG | - | chr1_3:51402119-51402138 | Msa0124000:intron | 55.0% | |
| AAGCTGGTGCAGGCACTACT+GGG | + | chr1_3:51402531-51402550 | None:intergenic | 55.0% | |
| GTGCCACCATGCCAAGAAAG+TGG | + | chr1_3:51402895-51402914 | None:intergenic | 55.0% | |
| ! | GTGATTGGGCCGCATCGATC+TGG | - | chr1_3:51399808-51399827 | Msa0124000:intron | 60.0% |
| ACCTTCCAATTCCACGCCCC+CGG | - | chr1_3:51401497-51401516 | Msa0124000:intron | 60.0% | |
| ACTAAAGAATCCCGGGGGCG+TGG | + | chr1_3:51401511-51401530 | None:intergenic | 60.0% | |
| CCATCATAGCCAGCGAGTCC+CGG | + | chr1_3:51402131-51402150 | None:intergenic | 60.0% | |
| ! | CGGGACTCGCTGGCTATGAT+GGG | - | chr1_3:51402129-51402148 | Msa0124000:intron | 60.0% |
| ! | GGGACTCGCTGGCTATGATG+GGG | - | chr1_3:51402130-51402149 | Msa0124000:intron | 60.0% |
| CAAGCTGGTGCAGGCACTAC+TGG | + | chr1_3:51402532-51402551 | None:intergenic | 60.0% | |
| ! | GGGGGCGTGGAATTGGAAGG+TGG | + | chr1_3:51401498-51401517 | None:intergenic | 65.0% |
| CCTTCCAATTCCACGCCCCC+GGG | - | chr1_3:51401498-51401517 | Msa0124000:intron | 65.0% | |
| ! | GAATCCCGGGGGCGTGGAAT+TGG | + | chr1_3:51401505-51401524 | None:intergenic | 65.0% |
| ! | CCGGGACTCGCTGGCTATGA+TGG | - | chr1_3:51402128-51402147 | Msa0124000:intron | 65.0% |
| CGAGCGATGCAAGCTGGTGC+AGG | + | chr1_3:51402541-51402560 | None:intergenic | 65.0% | |
| ! | CCCGGGGGCGTGGAATTGGA+AGG | + | chr1_3:51401501-51401520 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 51399102 | 51405415 | 51399102 | ID=Msa0124000;Name=Msa0124000 |
| chr1_3 | mRNA | 51399102 | 51405415 | 51399102 | ID=Msa0124000-mRNA-1;Parent=Msa0124000;Name=Msa0124000-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.87|0.82|0.94|1|1|17|226|595 |
| chr1_3 | exon | 51399102 | 51399466 | 51399102 | ID=Msa0124000-mRNA-1:exon:15736;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51399880 | 51400151 | 51399880 | ID=Msa0124000-mRNA-1:exon:15735;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51400230 | 51400442 | 51400230 | ID=Msa0124000-mRNA-1:exon:15734;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51400681 | 51400938 | 51400681 | ID=Msa0124000-mRNA-1:exon:15733;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51401310 | 51401477 | 51401310 | ID=Msa0124000-mRNA-1:exon:15732;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51402335 | 51402400 | 51402335 | ID=Msa0124000-mRNA-1:exon:15731;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51402492 | 51402511 | 51402492 | ID=Msa0124000-mRNA-1:exon:15730;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51402622 | 51402681 | 51402622 | ID=Msa0124000-mRNA-1:exon:15729;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51403084 | 51403144 | 51403084 | ID=Msa0124000-mRNA-1:exon:15728;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51403266 | 51403272 | 51403266 | ID=Msa0124000-mRNA-1:exon:15727;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51403440 | 51403504 | 51403440 | ID=Msa0124000-mRNA-1:exon:15726;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51404138 | 51404195 | 51404138 | ID=Msa0124000-mRNA-1:exon:15725;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51404284 | 51404401 | 51404284 | ID=Msa0124000-mRNA-1:exon:15724;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51404501 | 51404539 | 51404501 | ID=Msa0124000-mRNA-1:exon:15723;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51404640 | 51404709 | 51404640 | ID=Msa0124000-mRNA-1:exon:15722;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51404874 | 51404976 | 51404874 | ID=Msa0124000-mRNA-1:exon:15721;Parent=Msa0124000-mRNA-1 |
| chr1_3 | exon | 51405345 | 51405415 | 51405345 | ID=Msa0124000-mRNA-1:exon:15720;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51405345 | 51405415 | 51405345 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51404874 | 51404976 | 51404874 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51404640 | 51404709 | 51404640 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51404501 | 51404539 | 51404501 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51404284 | 51404401 | 51404284 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51404138 | 51404195 | 51404138 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51403440 | 51403504 | 51403440 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51403266 | 51403272 | 51403266 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51403084 | 51403144 | 51403084 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51402622 | 51402681 | 51402622 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51402492 | 51402511 | 51402492 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51402335 | 51402400 | 51402335 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51401310 | 51401477 | 51401310 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51400681 | 51400938 | 51400681 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51400230 | 51400442 | 51400230 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51399880 | 51400151 | 51399880 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | CDS | 51399328 | 51399466 | 51399328 | ID=Msa0124000-mRNA-1:cds;Parent=Msa0124000-mRNA-1 |
| chr1_3 | three_prime_UTR | 51399102 | 51399327 | 51399102 | ID=Msa0124000-mRNA-1:three_prime_utr;Parent=Msa0124000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
