AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0040040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0040040 MtrunA17_Chr1g0204621 97.256 1057 15 1 1 1043 581 1637 0.0 2097
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0040040 AT5G18525.1 55.273 1062 426 15 2 1043 607 1639 0.0 1138

Find 354 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTAAAATTACCTGATTTA+TGG 0.109916 1_1:+70010837 None:intergenic
TTCTCTCGATTGTTTCTTAT+TGG 0.112270 1_1:-70005977 Msa0040040:CDS
GTGACGGAACAATTCATATT+TGG 0.120579 1_1:-70007911 Msa0040040:CDS
CAGAAGAAACATAGAGTTTC+TGG 0.146902 1_1:+70006050 None:intergenic
ATTACCTGATTTATGGTAAT+TGG 0.181224 1_1:+70010844 None:intergenic
TGGGATGGGCCTGCATTTCT+TGG 0.203494 1_1:-70008751 Msa0040040:CDS
ACCTTGTTTGCATCTCTTCT+TGG 0.209573 1_1:-70009264 Msa0040040:CDS
GTACAAATGAATCTTGTAAA+AGG 0.211141 1_1:+70011013 None:intergenic
TGTTCTCCTTAATGTTATTT+TGG 0.211853 1_1:-70005909 Msa0040040:three_prime_UTR
CCAGCAAAGTTGTTGCTTAA+TGG 0.216421 1_1:-70008937 Msa0040040:CDS
TGCCCCTTGTTCACTGCTTT+GGG 0.216873 1_1:-70010705 Msa0040040:CDS
CTCTATGTTTCTTCTGATAA+TGG 0.221236 1_1:-70006043 Msa0040040:CDS
TTATTGTACTTGCATGGTTT+AGG 0.223490 1_1:-70013157 Msa0040040:five_prime_UTR
CTGATTTGGCTATACCTTCT+TGG 0.224939 1_1:-70012451 Msa0040040:five_prime_UTR
TCTCGCTGCATTTCATTGTT+TGG 0.226459 1_1:+70012153 None:intergenic
TTGACAGAGTATTCAAATTA+AGG 0.232036 1_1:+70007775 None:intergenic
ATTCATTTGTACGCGAAATA+TGG 0.233144 1_1:-70011002 Msa0040040:CDS
TTGCCCCTTGTTCACTGCTT+TGG 0.235135 1_1:-70010706 Msa0040040:CDS
TATTGTACTTGCATGGTTTA+GGG 0.235204 1_1:-70013156 Msa0040040:five_prime_UTR
AACTGTCTGTCCGGCTATTA+TGG 0.238330 1_1:-70008544 Msa0040040:CDS
CTCGCTGCATTTCATTGTTT+GGG 0.240171 1_1:+70012154 None:intergenic
TATGGTCATGGATTAGATTA+TGG 0.250576 1_1:-70013084 Msa0040040:five_prime_UTR
TCAAACAGTTCTTTAAGTTT+TGG 0.260886 1_1:+70009658 None:intergenic
GTGATGCATTGGAAAGTAAT+AGG 0.263069 1_1:-70012394 Msa0040040:five_prime_UTR
CAGCAAAGTTGTTGCTTAAT+GGG 0.264127 1_1:-70008936 Msa0040040:CDS
TCCCTAGTCCAGCCACCATC+TGG 0.268119 1_1:-70008771 Msa0040040:CDS
CTAGAATGCCAATCAATTAA+TGG 0.270988 1_1:+70012932 None:intergenic
TCTGCTTCGGTGCTACTAAT+TGG 0.273916 1_1:-70010889 Msa0040040:CDS
AATATCCAGTTTCTCCATTT+GGG 0.274767 1_1:-70006747 Msa0040040:CDS
AGGTGAATCCAGAAGAATTT+TGG 0.277617 1_1:+70011477 None:intergenic
CTGGCAGTGGCGTGGCGAAT+AGG 0.287893 1_1:+70012218 None:intergenic
CAATCAGACTTTAATGCATT+GGG 0.292635 1_1:+70013217 None:intergenic
TGACCCATTACATGTTATTC+TGG 0.293655 1_1:+70012199 None:intergenic
TGAATGACCTCTGAAAATAA+TGG 0.296594 1_1:+70006775 None:intergenic
GATCCATGCGACTCTCAATT+TGG 0.297384 1_1:+70009545 None:intergenic
TAGCATCTGTTTAACAATAA+AGG 0.302902 1_1:+70010528 None:intergenic
AACTTCTACGCCGTCATAAC+TGG 0.310104 1_1:-70009191 Msa0040040:CDS
TCAACAACCCAAGGCATTAC+TGG 0.310646 1_1:+70012812 None:intergenic
GATACCTCATCCAATCCTTT+TGG 0.310938 1_1:+70011632 None:intergenic
GTTGCTGCTAATACTCTCTT+TGG 0.315527 1_1:-70009727 Msa0040040:CDS
CCATTAAGCAACAACTTTGC+TGG 0.319943 1_1:+70008937 None:intergenic
CATCTTCCAAAATAACATTA+AGG 0.321020 1_1:+70005903 None:intergenic
ATTGCAACTGCACAAAGTTC+TGG 0.329370 1_1:-70007405 Msa0040040:CDS
TATGGAAATTACTGTGCTTC+AGG 0.331727 1_1:-70010205 Msa0040040:intron
CATATTTGGGATAGTCAAAC+AGG 0.332877 1_1:-70007897 Msa0040040:CDS
GTGGAAATGTCGTTGCTTCT+TGG 0.334153 1_1:-70007356 Msa0040040:CDS
GATTGTATGATGACTTTAGA+TGG 0.336441 1_1:-70010412 Msa0040040:CDS
GGGCTTTGGTGAGCTTTAAA+TGG 0.338255 1_1:+70008850 None:intergenic
TGACGGAACAATTCATATTT+GGG 0.338642 1_1:-70007910 Msa0040040:CDS
ATTCCTTCTTGCATTACTAC+TGG 0.339420 1_1:+70008829 None:intergenic
CTTGTAGTTGGCACTGGAAA+TGG 0.341118 1_1:-70007681 Msa0040040:CDS
AGCTTTCTCCATTAATTGAT+TGG 0.341906 1_1:-70012940 Msa0040040:five_prime_UTR
AAAGAAGCCCAATCCTATTC+CGG 0.344168 1_1:+70006702 None:intergenic
CCTTGTTTGCATCTCTTCTT+GGG 0.344823 1_1:-70009263 Msa0040040:CDS
TGAACCATGAACCATGGTTT+TGG 0.344846 1_1:-70008795 Msa0040040:CDS
GCCATCGGCCAAAATTCTTC+TGG 0.345535 1_1:-70011485 Msa0040040:CDS
ATGGGCCTGCATTTCTTGGC+CGG 0.346611 1_1:-70008747 Msa0040040:CDS
ACCGTTTATACTGCGGGAAT+TGG 0.346940 1_1:-70008613 Msa0040040:CDS
TTGGCCCCAAATGGAGAAAC+TGG 0.347247 1_1:+70006742 None:intergenic
GAATATCCAGTTTCTCCATT+TGG 0.347841 1_1:-70006748 Msa0040040:CDS
TTATTTCAATTTCCCGGAAT+AGG 0.349725 1_1:-70006715 Msa0040040:CDS
ACTATTTGATTCAATCTCAT+TGG 0.350715 1_1:-70011737 Msa0040040:CDS
ATTTCTGCTGTATGTTCCTC+TGG 0.351729 1_1:-70007474 Msa0040040:CDS
GAGGTCTCTGGCTGTTCATC+AGG 0.353053 1_1:-70008644 Msa0040040:CDS
TGATTTGGCTATACCTTCTT+GGG 0.355588 1_1:-70012450 Msa0040040:five_prime_UTR
TCGAACCTTTAGAAATTTCC+TGG 0.356044 1_1:+70009620 None:intergenic
AAGGAAGAACATCTCATCTC+TGG 0.359645 1_1:-70012016 Msa0040040:CDS
GATATCCAGACTTGCTTCTC+TGG 0.363689 1_1:-70011858 Msa0040040:CDS
TAACAGTTCCTTTATATCCT+TGG 0.367371 1_1:+70008590 None:intergenic
CACTGGATAGATATAATCTT+TGG 0.369654 1_1:-70012353 Msa0040040:five_prime_UTR
ATTGAGGAAGGATATTCATT+AGG 0.372237 1_1:+70012563 None:intergenic
TGGCAGTGGCGTGGCGAATA+GGG 0.375349 1_1:+70012219 None:intergenic
CATTGTTTGGGTCAAAACTT+TGG 0.375794 1_1:+70012166 None:intergenic
CCAATGGGTGAATAGTTTCC+AGG 0.380731 1_1:+70010956 None:intergenic
CTTGCATTACTACTGGGCTT+TGG 0.382921 1_1:+70008836 None:intergenic
GGCCCATCCCAGATGGTGGC+TGG 0.384708 1_1:+70008763 None:intergenic
ACAGATGCATACAAGTATAA+AGG 0.385887 1_1:+70007721 None:intergenic
TGGACAGAACTTTACGAGTC+TGG 0.386329 1_1:-70007186 Msa0040040:CDS
TAAACCATGCAAGTACAATA+AGG 0.387084 1_1:+70013159 None:intergenic
AAGATGTTATTTCAATTTCC+CGG 0.389458 1_1:-70006721 Msa0040040:CDS
AACTGCGTATCTACAAGAAT+TGG 0.390926 1_1:-70012112 Msa0040040:CDS
GTGAATCCCTGGGCAATTGC+AGG 0.394046 1_1:+70008973 None:intergenic
ATCAAACTTGTATATTTCTC+CGG 0.395281 1_1:-70010929 Msa0040040:CDS
CTTGTTCACTGCTTTGGGAA+AGG 0.395416 1_1:-70010700 Msa0040040:CDS
CGAGTCAGTCAACATGATAT+TGG 0.395785 1_1:+70013108 None:intergenic
CCAATCAGACTTTAATGCAT+TGG 0.397780 1_1:+70013216 None:intergenic
TCCAAGTTGTATTGAGTCTT+CGG 0.398170 1_1:+70013259 None:intergenic
TCATTTGACTTAATGGGTAA+TGG 0.400990 1_1:+70012040 None:intergenic
AGGGATTTCAGACGTTGAAT+AGG 0.400999 1_1:+70012691 None:intergenic
TATGTTGAAGAAAAGATATA+TGG 0.403090 1_1:+70011908 None:intergenic
CACAGGTTATTTACATTTGA+AGG 0.403308 1_1:-70011040 Msa0040040:CDS
TGCTGCAAATCTTGCAAAGC+AGG 0.404201 1_1:-70011371 Msa0040040:CDS
ACATAAGTTGCATACACGTT+GGG 0.405606 1_1:-70010245 Msa0040040:CDS
GGTTCTTATGCAGAAACATA+TGG 0.406085 1_1:-70010223 Msa0040040:CDS
TCTGCTTATTTCCAGCTCTC+TGG 0.406195 1_1:-70007206 Msa0040040:CDS
TCCCAGATGGTGGCTGGACT+AGG 0.406304 1_1:+70008769 None:intergenic
TGCCTCCAGAGAAGCAAGTC+TGG 0.407092 1_1:+70011853 None:intergenic
GCTGAGTCCGAAACGGAATC+TGG 0.409227 1_1:-70007855 Msa0040040:CDS
TTTCTTATTGGAACAGAAGA+TGG 0.412926 1_1:-70005965 Msa0040040:CDS
CAATTTCCCGGAATAGGATT+GGG 0.413685 1_1:-70006709 Msa0040040:CDS
GCAGGGAGCTCTCAGGCAAA+TGG 0.416099 1_1:-70011353 Msa0040040:CDS
GAATGACCTCTGAAAATAAT+GGG 0.416618 1_1:+70006776 None:intergenic
AATTTGAATACTCTGTCAAA+TGG 0.416766 1_1:-70007771 Msa0040040:CDS
CTCCAACTCTGGACAGGATC+AGG 0.417573 1_1:+70010451 None:intergenic
ACATGATGGTATGGCTGATT+TGG 0.420155 1_1:-70012465 Msa0040040:five_prime_UTR
GGAATTGGCCAAGGATATAA+AGG 0.420460 1_1:-70008598 Msa0040040:CDS
CCTCTACTTCCCTGGGATTG+TGG 0.420691 1_1:+70008898 None:intergenic
TGCAATTTAATGAAATCCTC+AGG 0.422535 1_1:+70012419 None:intergenic
CATTTCATCCAGTAATGCCT+TGG 0.425675 1_1:-70012820 Msa0040040:five_prime_UTR
TCCACAATGCCAAGATCAAC+AGG 0.426123 1_1:-70012269 Msa0040040:five_prime_UTR
TCAATTTCCCGGAATAGGAT+TGG 0.426272 1_1:-70006710 Msa0040040:CDS
CCAATGCATTAAAGTCTGAT+TGG 0.428658 1_1:-70013216 Msa0040040:five_prime_UTR
ATGGAACCGAGTTGGTAAAC+AGG 0.433069 1_1:-70010983 Msa0040040:CDS
TCATGTTGACTGACTCGTTA+TGG 0.435544 1_1:-70013102 Msa0040040:five_prime_UTR
TTAAAACTTTAGCTATTGCT+AGG 0.436246 1_1:+70005691 None:intergenic
GCCAATTCCCGCAGTATAAA+CGG 0.439195 1_1:+70008612 None:intergenic
TAACACACGGAGTGGGGATA+CGG 0.441178 1_1:+70005837 None:intergenic
AGATGAATGTCTGTCTGAAT+TGG 0.441189 1_1:-70012657 Msa0040040:five_prime_UTR
CTCATCTTAAACAGATTAGC+AGG 0.441360 1_1:-70012863 Msa0040040:five_prime_UTR
AAGAAGCCCAATCCTATTCC+GGG 0.442049 1_1:+70006703 None:intergenic
AATCTCATTGGAAATATACT+TGG 0.443666 1_1:-70011725 Msa0040040:CDS
TTCTCCCAGGAAATTTCTAA+AGG 0.444280 1_1:-70009625 Msa0040040:CDS
GGGAAAGGACTATGTGTAGA+TGG 0.445946 1_1:-70010685 Msa0040040:CDS
GGAACCAAAACCATGGTTCA+TGG 0.449680 1_1:+70008791 None:intergenic
TGTACCAATTACCATAAATC+AGG 0.449684 1_1:-70010848 Msa0040040:intron
TGGGCCTGCATTTCTTGGCC+GGG 0.451407 1_1:-70008746 Msa0040040:CDS
TTTCAATGGCAGATTTAGAC+AGG 0.453849 1_1:+70006678 None:intergenic
ATCTTTGGCTACAAAATGTC+TGG 0.453989 1_1:-70012338 Msa0040040:five_prime_UTR
CTGCCAGAATAACATGTAAT+GGG 0.454997 1_1:-70012202 Msa0040040:five_prime_UTR
AACTCTGGAATGCATTCATC+AGG 0.456200 1_1:+70012518 None:intergenic
ATTTCATCCAGTAATGCCTT+GGG 0.457041 1_1:-70012819 Msa0040040:five_prime_UTR
GCTAAATTAGATTCCAGTAC+AGG 0.459326 1_1:+70013055 None:intergenic
TGACGACGTCCTGTTGATCT+TGG 0.459901 1_1:+70012260 None:intergenic
AGTCCAGCCACCATCTGGGA+TGG 0.460110 1_1:-70008766 Msa0040040:CDS
ACCCATTAAGTCAAATGAAA+AGG 0.462974 1_1:-70012035 Msa0040040:CDS
GAACGTTATGCTTACTCAAT+CGG 0.463348 1_1:-70012294 Msa0040040:five_prime_UTR
GGGAAATTGAAATAACATCT+TGG 0.464235 1_1:+70006723 None:intergenic
TTTGGAATTTGTCAGCGGAT+TGG 0.464950 1_1:-70009709 Msa0040040:CDS
ACTGCCAGAATAACATGTAA+TGG 0.465103 1_1:-70012203 Msa0040040:five_prime_UTR
AGCAAATGGCGCTTGGCAAA+AGG 0.468397 1_1:-70012734 Msa0040040:five_prime_UTR
CCTGCATTTCTTGGCCGGGT+GGG 0.468647 1_1:-70008742 Msa0040040:CDS
TTTGGCACCTCTACTTCCCT+GGG 0.469185 1_1:+70008891 None:intergenic
ATAAGAAACAATCGAGAGAA+AGG 0.469705 1_1:+70005980 None:intergenic
ATTTGAATACTCTGTCAAAT+GGG 0.470552 1_1:-70007770 Msa0040040:CDS
CTCGCAACATTCACTATAAG+TGG 0.470617 1_1:+70011292 None:intergenic
TCGGTCCGTACATGATGGTA+TGG 0.470623 1_1:-70012474 Msa0040040:five_prime_UTR
CCAGATGATAATTGTGATGT+AGG 0.470654 1_1:-70012776 Msa0040040:five_prime_UTR
ATTATGGAATGAACCTGTAC+TGG 0.470689 1_1:-70013068 Msa0040040:five_prime_UTR
AATAACATCTTGGCCCCAAA+TGG 0.471290 1_1:+70006733 None:intergenic
CCTACATCACAATTATCATC+TGG 0.471330 1_1:+70012776 None:intergenic
TCATGGAGCAGTGAGGTCTC+TGG 0.473226 1_1:-70008656 Msa0040040:CDS
TACAAATGAATCTTGTAAAA+GGG 0.474924 1_1:+70011014 None:intergenic
TGATGCATTGGAAAGTAATA+GGG 0.476289 1_1:-70012393 Msa0040040:five_prime_UTR
AACACACGGAGTGGGGATAC+GGG 0.477072 1_1:+70005838 None:intergenic
GGTAGTTCCTGCAGAAATCC+TGG 0.477274 1_1:+70011688 None:intergenic
TAAATTGCATCGTGATGCAT+TGG 0.477850 1_1:-70012405 Msa0040040:five_prime_UTR
TAAAGTTCTGTCCAGAGAGC+TGG 0.478965 1_1:+70007195 None:intergenic
TCAAATTAAGGACATTTGCC+TGG 0.479779 1_1:+70007787 None:intergenic
GAGACTTAAGCAAGAGCAAA+TGG 0.480077 1_1:-70012748 Msa0040040:five_prime_UTR
GTCCAGCCACCATCTGGGAT+GGG 0.480291 1_1:-70008765 Msa0040040:CDS
AAATTCAGCTGCATCTGCTT+CGG 0.481864 1_1:-70010902 Msa0040040:CDS
ATAAAGGAACTGTTATGAAG+TGG 0.482962 1_1:-70008582 Msa0040040:CDS
CCCTAGTCCAGCCACCATCT+GGG 0.483111 1_1:-70008770 Msa0040040:CDS
CCCACCCGGCCAAGAAATGC+AGG 0.485323 1_1:+70008742 None:intergenic
CTCATTGGAAATATACTTGG+AGG 0.485424 1_1:-70011722 Msa0040040:CDS
GTGCTAAAGAACTCCAACTC+TGG 0.486676 1_1:+70010440 None:intergenic
GAGGTCAAAAGCTTCATATC+TGG 0.486738 1_1:-70007533 Msa0040040:CDS
CAATGCAGAGGCTCTATCAA+TGG 0.486759 1_1:-70012544 Msa0040040:five_prime_UTR
AGCCGAACTAACTGTCTGTC+CGG 0.486871 1_1:-70008553 Msa0040040:CDS
CAGGGAGCTCTCAGGCAAAT+GGG 0.486881 1_1:-70011352 Msa0040040:CDS
ATTGGTTCCAGTGAGGAGAT+TGG 0.489050 1_1:-70010871 Msa0040040:CDS
TGCTCCATGATGTGCGCGTA+TGG 0.489121 1_1:+70008669 None:intergenic
GTCTAAATCTGCCATTGAAA+CGG 0.489344 1_1:-70006675 Msa0040040:intron
AGCCGGACAGACAGTTAGTT+CGG 0.489357 1_1:+70008551 None:intergenic
ATTGATGTGCTGGTCAGAAT+TGG 0.490419 1_1:-70010661 Msa0040040:intron
TTCCTTCTTGCATTACTACT+GGG 0.490826 1_1:+70008830 None:intergenic
CTCCTCATGGCCATAATAGC+CGG 0.491742 1_1:+70008534 None:intergenic
AGTTGGTAAACAGGCATACC+TGG 0.493074 1_1:-70010974 Msa0040040:CDS
TTAGTGAATGTCCCTGCGGT+TGG 0.494040 1_1:+70011988 None:intergenic
AGAAGAAACATAGAGTTTCT+GGG 0.494412 1_1:+70006051 None:intergenic
GCCTCTTAGTGTTCTTCGAA+TGG 0.497207 1_1:-70012606 Msa0040040:five_prime_UTR
GCCATTCGAAGAACACTAAG+AGG 0.499591 1_1:+70012605 None:intergenic
AAGGACATTTGCCTGGTCAC+TGG 0.501293 1_1:+70007794 None:intergenic
GGCATTCTAGCTTTCATCAG+TGG 0.501714 1_1:-70012919 Msa0040040:five_prime_UTR
CTTTCCCAAAGCAGTGAACA+AGG 0.504692 1_1:+70010701 None:intergenic
TTGCAAAGCAGGGAGCTCTC+AGG 0.504910 1_1:-70011360 Msa0040040:CDS
GAAACTCTTGTAGTTGGCAC+TGG 0.505468 1_1:-70007687 Msa0040040:CDS
AAGCATGCATCCAAAAGGAT+TGG 0.507335 1_1:-70011642 Msa0040040:CDS
ATGGTCAATTCCACAATCCC+AGG 0.509781 1_1:-70008908 Msa0040040:CDS
GACAGAAGAAGTTATTGTAA+AGG 0.509830 1_1:-70010374 Msa0040040:CDS
ACCATGGTTCATGGTTCACT+TGG 0.510637 1_1:+70008800 None:intergenic
GCCTGCATTTCTTGGCCGGG+TGG 0.511013 1_1:-70008743 Msa0040040:CDS
TGGCTACAAAATGTCTGGCC+AGG 0.513800 1_1:-70012333 Msa0040040:five_prime_UTR
TGAGAAGCATACCGTTTCAA+TGG 0.514349 1_1:+70006664 None:intergenic
TCTTTAGCAACAAGCTGAAG+TGG 0.515434 1_1:+70011412 None:intergenic
CGAGTGATACTGAAGCTGAA+TGG 0.515855 1_1:-70011273 Msa0040040:CDS
AAGCAAGAGCAAATGGCGCT+TGG 0.516338 1_1:-70012741 Msa0040040:five_prime_UTR
GCACTGGAAATGGTTCTCTC+AGG 0.516506 1_1:-70007671 Msa0040040:intron
TTCGTCAATGTTGTGCTACA+TGG 0.517465 1_1:-70009230 Msa0040040:CDS
TGTATTCAGATGTGAATCCC+TGG 0.519878 1_1:+70008962 None:intergenic
CCCAGATGGTGGCTGGACTA+GGG 0.520579 1_1:+70008770 None:intergenic
GGGATGGCCAGATTCCGTTT+CGG 0.521530 1_1:+70007848 None:intergenic
GCATTACTGGATGAAATGTA+TGG 0.521652 1_1:+70012825 None:intergenic
TACTCCATACGCGCACATCA+TGG 0.524252 1_1:-70008673 Msa0040040:CDS
CTCTGGTTCTAGCAAGGCGC+AGG 0.524791 1_1:-70007457 Msa0040040:CDS
CAAAAGCTTCATATCTGGAG+GGG 0.526049 1_1:-70007528 Msa0040040:CDS
GCTTCTTGGCGTGCTCATGA+TGG 0.528187 1_1:-70007342 Msa0040040:CDS
TAAAGGAACTGTTATGAAGT+GGG 0.528692 1_1:-70008581 Msa0040040:CDS
GGCAAAAGGTGATGAACAGT+TGG 0.529530 1_1:-70012720 Msa0040040:five_prime_UTR
TACAAGTTTGATAAGACCAA+TGG 0.530373 1_1:+70010940 None:intergenic
AGCTTTCATCAGTGGTGGAA+AGG 0.530410 1_1:-70012911 Msa0040040:five_prime_UTR
TGATGAGCTTGCTTTCTCCC+AGG 0.530569 1_1:-70009638 Msa0040040:CDS
GGTTCTAGCAAGGCGCAGGC+AGG 0.531561 1_1:-70007453 Msa0040040:CDS
TGTCATTTCAACTACATCAC+TGG 0.532522 1_1:-70012370 Msa0040040:five_prime_UTR
AGGAAGAACATCTCATCTCT+GGG 0.532598 1_1:-70012015 Msa0040040:CDS
TCTGCCTTATTGTACTTGCA+TGG 0.532933 1_1:-70013163 Msa0040040:five_prime_UTR
AAGTTGTTGCTTAATGGGGT+TGG 0.533169 1_1:-70008931 Msa0040040:CDS
TCTGCTGAAACTCTTGTAGT+TGG 0.534649 1_1:-70007693 Msa0040040:CDS
TGTGCAGTTGCAATTAAAGA+TGG 0.535167 1_1:+70007414 None:intergenic
TTGGAGGATGGAACATTACC+AGG 0.535227 1_1:-70011706 Msa0040040:CDS
ATTGTACTTGCATGGTTTAG+GGG 0.535919 1_1:-70013155 Msa0040040:five_prime_UTR
CCCAAGAAGAGATGCAAACA+AGG 0.536000 1_1:+70009263 None:intergenic
TGTAGATGGCATTGATGTGC+TGG 0.539854 1_1:-70010671 Msa0040040:CDS
GAAATAAGCAGATGTTCCTC+AGG 0.540086 1_1:+70007217 None:intergenic
TAGAAGACCTGCAATTGCCC+AGG 0.540149 1_1:-70008980 Msa0040040:CDS
GTGGCGTGGCGAATAGGGTG+TGG 0.542984 1_1:+70012224 None:intergenic
CTGAAAATAATGGGCTGTGA+TGG 0.543699 1_1:+70006785 None:intergenic
AAAATAGGTTGTAGTAATGA+TGG 0.544130 1_1:-70012995 Msa0040040:five_prime_UTR
GAGTGATACTGAAGCTGAAT+GGG 0.544198 1_1:-70011272 Msa0040040:CDS
TAAAACTTTAGCTATTGCTA+GGG 0.544802 1_1:+70005692 None:intergenic
TCTAAAGGTTCGACTGCTGT+CGG 0.545203 1_1:-70009610 Msa0040040:CDS
ACAAGTTTGATAAGACCAAT+GGG 0.545333 1_1:+70010941 None:intergenic
CGAACCTTTAGAAATTTCCT+GGG 0.546014 1_1:+70009621 None:intergenic
GCTGCAAATCTTGCAAAGCA+GGG 0.546324 1_1:-70011370 Msa0040040:CDS
ATGGGCATACATACTACTAA+AGG 0.546929 1_1:-70011254 Msa0040040:CDS
AATGAGATTGAATCAAATAG+TGG 0.547050 1_1:+70011739 None:intergenic
TCCGAAGACTCAATACAACT+TGG 0.547756 1_1:-70013260 Msa0040040:five_prime_UTR
TCCTGTTGATCTTGGCATTG+TGG 0.547976 1_1:+70012268 None:intergenic
CCTGGAAACTATTCACCCAT+TGG 0.548492 1_1:-70010956 Msa0040040:CDS
ATTACATGTTATTCTGGCAG+TGG 0.548876 1_1:+70012205 None:intergenic
TGTCGAAGCATGCATCCAAA+AGG 0.549111 1_1:-70011647 Msa0040040:CDS
GGACAGAACTTTACGAGTCT+GGG 0.549138 1_1:-70007185 Msa0040040:CDS
AATTTAGCTTTGCAAGAGAG+TGG 0.549287 1_1:-70013040 Msa0040040:five_prime_UTR
AGCCTGATCCTGTCCAGAGT+TGG 0.549589 1_1:-70010453 Msa0040040:CDS
GTGATTCAGTGGGAATATGC+AGG 0.549614 1_1:-70009039 Msa0040040:intron
AACATTACCAGGATTTCTGC+AGG 0.549934 1_1:-70011695 Msa0040040:CDS
AAAGAACTCCAACTCTGGAC+AGG 0.551010 1_1:+70010445 None:intergenic
CATGGTTTAGGGGTTTCCCA+TGG 0.551177 1_1:-70013145 Msa0040040:five_prime_UTR
GAATCTACCGTTTATACTGC+GGG 0.551687 1_1:-70008619 Msa0040040:CDS
CAGATTAGCAGGAAGAAGGT+GGG 0.552014 1_1:-70012852 Msa0040040:five_prime_UTR
CTCTCTTTGGAATTTGTCAG+CGG 0.556420 1_1:-70009714 Msa0040040:CDS
TGGTACACCAATCTCCTCAC+TGG 0.556845 1_1:+70010864 None:intergenic
TCTTAGCAACAATTGCGGCC+TGG 0.557464 1_1:+70012315 None:intergenic
TCTAGCAAGGCGCAGGCAGG+TGG 0.558943 1_1:-70007450 Msa0040040:CDS
TAAACAGATTAGCAGGAAGA+AGG 0.559223 1_1:-70012856 Msa0040040:five_prime_UTR
ATGTTATTCTGGCAGTGGCG+TGG 0.561109 1_1:+70012210 None:intergenic
GACATAAGTTGCATACACGT+TGG 0.561418 1_1:-70010246 Msa0040040:CDS
ATTGAGTCTTCGGAAGCACC+AGG 0.561926 1_1:+70013269 None:intergenic
AACATCTGATTACACTAACC+TGG 0.563002 1_1:-70013287 Msa0040040:five_prime_UTR
GATTAGCAGGAAGAAGGTGG+GGG 0.563910 1_1:-70012850 Msa0040040:five_prime_UTR
AGCAAAGTTGTTGCTTAATG+GGG 0.564351 1_1:-70008935 Msa0040040:CDS
GGTATGCCTGTTTACCAACT+CGG 0.570110 1_1:+70010977 None:intergenic
TGCAATTAAAGATGGTGAGG+TGG 0.572550 1_1:+70007422 None:intergenic
AGATTAGCAGGAAGAAGGTG+GGG 0.572744 1_1:-70012851 Msa0040040:five_prime_UTR
TCAGGGCTCTCTGCCCAAGA+AGG 0.574360 1_1:+70012437 None:intergenic
GAGCTAAAATCAACAACCCA+AGG 0.575046 1_1:+70012803 None:intergenic
CACAGATGCTGAATGGTTCG+TGG 0.575944 1_1:+70007827 None:intergenic
TTGAGATTAACACACGGAGT+GGG 0.576834 1_1:+70005830 None:intergenic
CCACAATCCCAGGGAAGTAG+AGG 0.577363 1_1:-70008898 Msa0040040:CDS
TGACTGACTCGTTATGGTCA+TGG 0.578705 1_1:-70013096 Msa0040040:five_prime_UTR
ATCAGCCATACCATCATGTA+CGG 0.579669 1_1:+70012469 None:intergenic
GTCAAAAGCTTCATATCTGG+AGG 0.580184 1_1:-70007530 Msa0040040:CDS
TGTTGCTTAATGGGGTTGGA+TGG 0.580653 1_1:-70008927 Msa0040040:CDS
TTTATCATCTAGTGGAAGAG+TGG 0.581003 1_1:-70007940 Msa0040040:CDS
AGTATTTGCTGAGTCCGAAA+CGG 0.583188 1_1:-70007862 Msa0040040:CDS
TTGATAGAGCCTCTGCATTG+AGG 0.583870 1_1:+70012547 None:intergenic
TTGGAAATATACTTGGAGGA+TGG 0.586202 1_1:-70011718 Msa0040040:CDS
TATACTGCGGGAATTGGCCA+AGG 0.586424 1_1:-70008607 Msa0040040:CDS
TGCTGTCGGCAGAAACTCGA+AGG 0.587841 1_1:-70009596 Msa0040040:CDS
ATGATACCTTCCAGTTATGA+CGG 0.588435 1_1:+70009181 None:intergenic
TTCCCAAAGCAGTGAACAAG+GGG 0.588580 1_1:+70010703 None:intergenic
TCTCTGGGAGATCCAACCGC+AGG 0.588646 1_1:-70012000 Msa0040040:CDS
ATATCCAGTTTCTCCATTTG+GGG 0.589233 1_1:-70006746 Msa0040040:CDS
ACAGATTAGCAGGAAGAAGG+TGG 0.590370 1_1:-70012853 Msa0040040:five_prime_UTR
AAATGCAGGCCCATCCCAGA+TGG 0.592310 1_1:+70008756 None:intergenic
AAAAGCTTCATATCTGGAGG+GGG 0.594468 1_1:-70007527 Msa0040040:CDS
CATTCATCTGATACATGATG+AGG 0.596133 1_1:+70012671 None:intergenic
TGGACGGACATATATTACCA+TGG 0.597540 1_1:+70013128 None:intergenic
AAGTGGAGCAAGAAACAAGT+AGG 0.597875 1_1:+70011429 None:intergenic
ATGACACATCAATGAATGAT+CGG 0.601298 1_1:+70010485 None:intergenic
TAGAGCCTCTGCATTGAGGA+AGG 0.602901 1_1:+70012551 None:intergenic
GTATTCAGATGTGAATCCCT+GGG 0.604728 1_1:+70008963 None:intergenic
ATGTTCCTCTGGTTCTAGCA+AGG 0.604833 1_1:-70007463 Msa0040040:CDS
GAAGAAACATAGAGTTTCTG+GGG 0.604881 1_1:+70006052 None:intergenic
TTGCCTCTGAAGATATTGCA+AGG 0.605556 1_1:-70011810 Msa0040040:CDS
TGAAGAAACTAACCTCCTCA+TGG 0.605744 1_1:+70008521 None:intergenic
GTCCCTTGCAATATCTTCAG+AGG 0.606438 1_1:+70011807 None:intergenic
ATGCTGAATGGTTCGTGGGA+TGG 0.608288 1_1:+70007832 None:intergenic
CATAAGTTGCATACACGTTG+GGG 0.609049 1_1:-70010244 Msa0040040:CDS
GGACGGACATATATTACCAT+GGG 0.609304 1_1:+70013129 None:intergenic
CAGATGATAATTGTGATGTA+GGG 0.610503 1_1:-70012775 Msa0040040:five_prime_UTR
TGCAGGCCCATCCCAGATGG+TGG 0.611271 1_1:+70008759 None:intergenic
CGCGAAATATGGAACCGAGT+TGG 0.611423 1_1:-70010991 Msa0040040:CDS
TTTACAGTTGGCATCACCTG+AGG 0.612095 1_1:-70007233 Msa0040040:intron
ATTCTAGCTTTCATCAGTGG+TGG 0.612673 1_1:-70012916 Msa0040040:five_prime_UTR
GCATCCAAAAGGATTGGATG+AGG 0.614446 1_1:-70011636 Msa0040040:intron
CTTCCAAATTGAGAGTCGCA+TGG 0.614661 1_1:-70009548 Msa0040040:CDS
CATATGAAAGAGGAAGATGA+AGG 0.615957 1_1:-70011889 Msa0040040:CDS
TCAGTCAACATGATATTGGA+CGG 0.619115 1_1:+70013112 None:intergenic
ACACACGGAGTGGGGATACG+GGG 0.619116 1_1:+70005839 None:intergenic
AGAAGACCTGCAATTGCCCA+GGG 0.619966 1_1:-70008979 Msa0040040:CDS
CTTCTGTCAAGAAAGCTACA+AGG 0.624064 1_1:+70010389 None:intergenic
AATCAGACTTTAATGCATTG+GGG 0.624957 1_1:+70013218 None:intergenic
CTGCGCCTTGCTAGAACCAG+AGG 0.625270 1_1:+70007458 None:intergenic
CTCTGGGAGATCCAACCGCA+GGG 0.627286 1_1:-70011999 Msa0040040:CDS
AGCCCAGTAGTAATGCAAGA+AGG 0.627415 1_1:-70008832 Msa0040040:CDS
ATCCAGACTTGCTTCTCTGG+AGG 0.629702 1_1:-70011855 Msa0040040:CDS
GGAAGAGTGGCATCTTGTGA+CGG 0.632199 1_1:-70007927 Msa0040040:CDS
TGCCTCTGAAGATATTGCAA+GGG 0.635052 1_1:-70011809 Msa0040040:CDS
ACAGATGCTGAATGGTTCGT+GGG 0.635977 1_1:+70007828 None:intergenic
TGAGATTAACACACGGAGTG+GGG 0.637101 1_1:+70005831 None:intergenic
ATTCATCTGATACATGATGA+GGG 0.637705 1_1:+70012672 None:intergenic
AGGTTCATTGATGTTGCTCG+AGG 0.638433 1_1:-70007552 Msa0040040:CDS
ACAAGTATTCTAACATGAGG+AGG 0.638461 1_1:+70011667 None:intergenic
TGGAGCAAGAAACAAGTAGG+AGG 0.638616 1_1:+70011432 None:intergenic
TTCAATGGCAGATTTAGACA+GGG 0.645458 1_1:+70006679 None:intergenic
GCAATTTAATGAAATCCTCA+GGG 0.647213 1_1:+70012420 None:intergenic
TCAAAAGCTTCATATCTGGA+GGG 0.650188 1_1:-70007529 Msa0040040:CDS
TTTCCCAAAGCAGTGAACAA+GGG 0.654528 1_1:+70010702 None:intergenic
AATATCCTTCCTCAATGCAG+AGG 0.656083 1_1:-70012556 Msa0040040:five_prime_UTR
CGGCTATTATGGCCATGAGG+AGG 0.656404 1_1:-70008533 Msa0040040:intron
TCATGATGGATATGTAACAA+AGG 0.657689 1_1:-70007328 Msa0040040:intron
TGGTCAATTCCACAATCCCA+GGG 0.657919 1_1:-70008907 Msa0040040:CDS
TCTGCAGCTATAAAGCAAGA+AGG 0.658173 1_1:-70012631 Msa0040040:five_prime_UTR
AAATTGTTTGATGCAAAGAG+TGG 0.661071 1_1:-70007375 Msa0040040:CDS
TCGACAAGTATTCTAACATG+AGG 0.662646 1_1:+70011664 None:intergenic
TCTACGCCGTCATAACTGGA+AGG 0.664785 1_1:-70009187 Msa0040040:intron
TGAATCTACCGTTTATACTG+CGG 0.665142 1_1:-70008620 Msa0040040:CDS
ACCAAGTGAACCATGAACCA+TGG 0.670447 1_1:-70008801 Msa0040040:CDS
ATTAGCAGGAAGAAGGTGGG+GGG 0.680097 1_1:-70012849 Msa0040040:five_prime_UTR
CTTGAGATTAACACACGGAG+TGG 0.682257 1_1:+70005829 None:intergenic
AACGTTCTTAGCAACAATTG+CGG 0.682814 1_1:+70012310 None:intergenic
AAAGCTTCATATCTGGAGGG+GGG 0.688280 1_1:-70007526 Msa0040040:CDS
GACGTCGTCAGCTCTTTATG+CGG 0.688695 1_1:-70012247 Msa0040040:five_prime_UTR
ATATTTGGGATAGTCAAACA+GGG 0.697742 1_1:-70007896 Msa0040040:CDS
ATGATAATTGTGATGTAGGG+TGG 0.702931 1_1:-70012772 Msa0040040:five_prime_UTR
AGTTGCAATTAAAGATGGTG+AGG 0.705431 1_1:+70007419 None:intergenic
GCTACTAATTGGTTCCAGTG+AGG 0.709343 1_1:-70010878 Msa0040040:CDS
GTCCGGCTATTATGGCCATG+AGG 0.711734 1_1:-70008536 Msa0040040:CDS
AAGAAACATAGAGTTTCTGG+GGG 0.714573 1_1:+70006053 None:intergenic
GGACTAGGGAACCAAAACCA+TGG 0.722956 1_1:+70008784 None:intergenic
TTCTTGGGCAGAGAGCCCTG+AGG 0.744339 1_1:-70012435 Msa0040040:five_prime_UTR
GAAGACTTGAGATTAACACA+CGG 0.745525 1_1:+70005824 None:intergenic
GCGCACATCATGGAGCAGTG+AGG 0.759244 1_1:-70008663 Msa0040040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGTTTTTTTATTCTTTTT+TGG - chr1_1:70008675-70008694 Msa0040040:CDS 10.0%
!! AATTAATATACAATATTTAC+TGG + chr1_1:70008720-70008739 None:intergenic 10.0%
!!! ACAAGTTTTTTTTTTTTTTT+TGG + chr1_1:70012023-70012042 None:intergenic 10.0%
!!! TATCTCAAAATTTTAAAATA+AGG + chr1_1:70012706-70012725 None:intergenic 10.0%
!!! AATTTTTTTTTCTATATAGG+AGG - chr1_1:70007507-70007526 Msa0040040:CDS 15.0%
!! ATCAAAATTAAGACTTATTT+GGG - chr1_1:70009007-70009026 Msa0040040:CDS 15.0%
!!! AATGAAGATTTTAAACAAAA+GGG - chr1_1:70010834-70010853 Msa0040040:intron 15.0%
!!! TTTCAATTTGTATTTTTCTA+CGG - chr1_1:70010984-70011003 Msa0040040:CDS 15.0%
!!! TATTATTCATCTCAAATTTT+AGG - chr1_1:70011032-70011051 Msa0040040:CDS 15.0%
!! GTTCAAATTTCAAAATATTA+CGG - chr1_1:70011715-70011734 Msa0040040:CDS 15.0%
!!! TTTATTTTTTTACTGTTGTA+TGG - chr1_1:70013237-70013256 Msa0040040:five_prime_UTR 15.0%
!!! TTATTTTTTTACTGTTGTAT+GGG - chr1_1:70013238-70013257 Msa0040040:five_prime_UTR 15.0%
!! CTTTCATTGACAAAAATTAT+CGG - chr1_1:70007066-70007085 Msa0040040:intron 20.0%
!!! GATATATGGTTCATTTTATT+TGG + chr1_1:70007095-70007114 None:intergenic 20.0%
!! TATGTTGAAGAAAAGATATA+TGG + chr1_1:70007109-70007128 None:intergenic 20.0%
!!! TGTAAAATTTTTTGTATGGT+TGG + chr1_1:70007833-70007852 None:intergenic 20.0%
!!! AACCATACAAAAAATTTTAC+AGG - chr1_1:70007832-70007851 Msa0040040:CDS 20.0%
!! TACAAATGAATCTTGTAAAA+GGG + chr1_1:70008003-70008022 None:intergenic 20.0%
!! AACTAAAATTACCTGATTTA+TGG + chr1_1:70008180-70008199 None:intergenic 20.0%
!! TAAGGTTAATAAAACACTAA+TGG + chr1_1:70008267-70008286 None:intergenic 20.0%
!! AGTCTGATTCAATAATTATA+AGG + chr1_1:70008285-70008304 None:intergenic 20.0%
!! TGGTAAGTCAAAAAAAAAAA+GGG + chr1_1:70008447-70008466 None:intergenic 20.0%
!!! TTTTTTTTTTTGACTTACCA+GGG - chr1_1:70008447-70008466 Msa0040040:intron 20.0%
!! GATCAAAATTAAGACTTATT+TGG - chr1_1:70009006-70009025 Msa0040040:CDS 20.0%
!! CTTATTGAAAATAAATGGTT+CGG + chr1_1:70009203-70009222 None:intergenic 20.0%
!! AAGGTTACCAAATTAAAAAT+TGG - chr1_1:70009437-70009456 Msa0040040:intron 20.0%
!! TTACCAAATTAAAAATTGGA+GGG - chr1_1:70009441-70009460 Msa0040040:intron 20.0%
!! AAAAAGAAAAGATGTAAATG+AGG + chr1_1:70009937-70009956 None:intergenic 20.0%
!!! GAATGAAGATTTTAAACAAA+AGG - chr1_1:70010833-70010852 Msa0040040:intron 20.0%
!!! ATGAAGATTTTAAACAAAAG+GGG - chr1_1:70010835-70010854 Msa0040040:intron 20.0%
!!! ATTTGTATTTTATCATCTAG+TGG - chr1_1:70011066-70011085 Msa0040040:intron 20.0%
!! TAAATCTATTAAGAGATGAT+TGG + chr1_1:70012587-70012606 None:intergenic 20.0%
!! ATCATCTCTTAATAGATTTA+AGG - chr1_1:70012587-70012606 Msa0040040:five_prime_UTR 20.0%
!! TCATCTCTTAATAGATTTAA+GGG - chr1_1:70012588-70012607 Msa0040040:five_prime_UTR 20.0%
!!! TGGAATTAATCAAATTTTTG+TGG - chr1_1:70012730-70012749 Msa0040040:five_prime_UTR 20.0%
!!! AAATTTTGGTCATGATTATA+TGG - chr1_1:70012905-70012924 Msa0040040:five_prime_UTR 20.0%
! AAATCAAAACCTGCAAAAAT+AGG - chr1_1:70006004-70006023 Msa0040040:CDS 25.0%
! AAAATAGGTTGTAGTAATGA+TGG - chr1_1:70006019-70006038 Msa0040040:CDS 25.0%
!!! TCCTTTTCATTTGACTTAAT+GGG + chr1_1:70006983-70007002 None:intergenic 25.0%
!!! TTCCTTTTCATTTGACTTAA+TGG + chr1_1:70006984-70007003 None:intergenic 25.0%
!! TTTTCTTCAACATATGAAAG+AGG - chr1_1:70007115-70007134 Msa0040040:intron 25.0%
! AATGAGATTGAATCAAATAG+TGG + chr1_1:70007278-70007297 None:intergenic 25.0%
! ACTATTTGATTCAATCTCAT+TGG - chr1_1:70007277-70007296 Msa0040040:intron 25.0%
! AATCTCATTGGAAATATACT+TGG - chr1_1:70007289-70007308 Msa0040040:intron 25.0%
!! TTGATTGTTTTCGGAAAATA+AGG + chr1_1:70007560-70007579 None:intergenic 25.0%
!!! AGCCTGTAAAATTTTTTGTA+TGG + chr1_1:70007837-70007856 None:intergenic 25.0%
! GTACAAATGAATCTTGTAAA+AGG + chr1_1:70008004-70008023 None:intergenic 25.0%
! ATCAAACTTGTATATTTCTC+CGG - chr1_1:70008085-70008104 Msa0040040:intron 25.0%
! ATTACCTGATTTATGGTAAT+TGG + chr1_1:70008173-70008192 None:intergenic 25.0%
! TAAGTCAAAAAAAAAAAGGG+GGG + chr1_1:70008444-70008463 None:intergenic 25.0%
! GTAAGTCAAAAAAAAAAAGG+GGG + chr1_1:70008445-70008464 None:intergenic 25.0%
! GGTAAGTCAAAAAAAAAAAG+GGG + chr1_1:70008446-70008465 None:intergenic 25.0%
! CTGGTAAGTCAAAAAAAAAA+AGG + chr1_1:70008448-70008467 None:intergenic 25.0%
!!! CTTTTTTTTTTTGACTTACC+AGG - chr1_1:70008446-70008465 Msa0040040:intron 25.0%
!!! TTTTTTTTTTGACTTACCAG+GGG - chr1_1:70008448-70008467 Msa0040040:intron 25.0%
! TAGCATCTGTTTAACAATAA+AGG + chr1_1:70008489-70008508 None:intergenic 25.0%
!!! AATTCTTCATTGGTTTGTTT+TGG - chr1_1:70008839-70008858 Msa0040040:CDS 25.0%
! TGATCATTCTAATCAAAACA+AGG + chr1_1:70008991-70009010 None:intergenic 25.0%
! TACATTTCAATCAGTATACT+TGG - chr1_1:70009151-70009170 Msa0040040:intron 25.0%
! GATGGCTTATTGAAAATAAA+TGG + chr1_1:70009208-70009227 None:intergenic 25.0%
!!! TCAAACAGTTCTTTAAGTTT+TGG + chr1_1:70009359-70009378 None:intergenic 25.0%
! GTTACCAAATTAAAAATTGG+AGG - chr1_1:70009440-70009459 Msa0040040:intron 25.0%
! TACCAAATTAAAAATTGGAG+GGG - chr1_1:70009442-70009461 Msa0040040:intron 25.0%
! TGCAAAAGTAAAATAACTCT+AGG - chr1_1:70009564-70009583 Msa0040040:CDS 25.0%
! AGTAAAATAACTCTAGGTAA+AGG - chr1_1:70009570-70009589 Msa0040040:CDS 25.0%
!!! TAAATGAGATTTTTTTCGTG+AGG - chr1_1:70009652-70009671 Msa0040040:CDS 25.0%
!! TCTTCTCTGAATCAAATTTT+TGG + chr1_1:70010144-70010163 None:intergenic 25.0%
! GGAAATATGTAAATACTACA+GGG + chr1_1:70010573-70010592 None:intergenic 25.0%
! TAGTATTTACATATTTCCCA+TGG - chr1_1:70010575-70010594 Msa0040040:intron 25.0%
!! GATGGTGATTTTAAACATAA+GGG - chr1_1:70010654-70010673 Msa0040040:intron 25.0%
!! ATGGTGATTTTAAACATAAG+GGG - chr1_1:70010655-70010674 Msa0040040:intron 25.0%
!! GTTTAAAATCTTCATTCATC+AGG + chr1_1:70010830-70010849 None:intergenic 25.0%
! ATAATAAGTGTTACATTCCT+AGG + chr1_1:70011018-70011037 None:intergenic 25.0%
!! TTGACAGAGTATTCAAATTA+AGG + chr1_1:70011242-70011261 None:intergenic 25.0%
! AATTTGAATACTCTGTCAAA+TGG - chr1_1:70011243-70011262 Msa0040040:CDS 25.0%
! ATTTGAATACTCTGTCAAAT+GGG - chr1_1:70011244-70011263 Msa0040040:CDS 25.0%
! TTGTAAAAACATTCTTACTG+TGG + chr1_1:70011941-70011960 None:intergenic 25.0%
!!! TTGGTATCATTTTGATTACT+AGG + chr1_1:70012004-70012023 None:intergenic 25.0%
!!! AAGATGTTATTTCAATTTCC+CGG - chr1_1:70012293-70012312 Msa0040040:five_prime_UTR 25.0%
!!! TGTGAATTTCTTTTTTCCTT+TGG - chr1_1:70012399-70012418 Msa0040040:five_prime_UTR 25.0%
! GTATATCCATCATTTATTAC+TGG + chr1_1:70012447-70012466 None:intergenic 25.0%
! ATATACCCATCATTTATTAC+TGG + chr1_1:70012532-70012551 None:intergenic 25.0%
!!! TTAAAATTTTGAGATAGCAG+TGG - chr1_1:70012710-70012729 Msa0040040:five_prime_UTR 25.0%
!!! TAAATTTTTCAGTATTCCCT+TGG + chr1_1:70012767-70012786 None:intergenic 25.0%
!!! TGTTCTCCTTAATGTTATTT+TGG - chr1_1:70013105-70013124 Msa0040040:five_prime_UTR 25.0%
! CATCTTCCAAAATAACATTA+AGG + chr1_1:70013114-70013133 None:intergenic 25.0%
!!! CTTAATGTTATTTTGGAAGA+TGG - chr1_1:70013112-70013131 Msa0040040:five_prime_UTR 25.0%
! GTTTTCAAAATTGCAAGTAC+AGG + chr1_1:70005710-70005729 None:intergenic 30.0%
AATCAGACTTTAATGCATTG+GGG + chr1_1:70005799-70005818 None:intergenic 30.0%
CAATCAGACTTTAATGCATT+GGG + chr1_1:70005800-70005819 None:intergenic 30.0%
TAAACCATGCAAGTACAATA+AGG + chr1_1:70005858-70005877 None:intergenic 30.0%
TTATTGTACTTGCATGGTTT+AGG - chr1_1:70005857-70005876 Msa0040040:three_prime_UTR 30.0%
TATTGTACTTGCATGGTTTA+GGG - chr1_1:70005858-70005877 Msa0040040:three_prime_UTR 30.0%
!! TATGGTCATGGATTAGATTA+TGG - chr1_1:70005930-70005949 Msa0040040:exon 30.0%
!!! TTACTACAACCTATTTTTGC+AGG + chr1_1:70006016-70006035 None:intergenic 30.0%
AGCTTTCTCCATTAATTGAT+TGG - chr1_1:70006074-70006093 Msa0040040:CDS 30.0%
CTAGAATGCCAATCAATTAA+TGG + chr1_1:70006085-70006104 None:intergenic 30.0%
CAGATGATAATTGTGATGTA+GGG - chr1_1:70006239-70006258 Msa0040040:intron 30.0%
ATTCATCTGATACATGATGA+GGG + chr1_1:70006345-70006364 None:intergenic 30.0%
ATTGAGGAAGGATATTCATT+AGG + chr1_1:70006454-70006473 None:intergenic 30.0%
GCAATTTAATGAAATCCTCA+GGG + chr1_1:70006597-70006616 None:intergenic 30.0%
TGCAATTTAATGAAATCCTC+AGG + chr1_1:70006598-70006617 None:intergenic 30.0%
TGATGCATTGGAAAGTAATA+GGG - chr1_1:70006621-70006640 Msa0040040:intron 30.0%
CACTGGATAGATATAATCTT+TGG - chr1_1:70006661-70006680 Msa0040040:intron 30.0%
! TCATTTGACTTAATGGGTAA+TGG + chr1_1:70006977-70006996 None:intergenic 30.0%
ACCCATTAAGTCAAATGAAA+AGG - chr1_1:70006979-70006998 Msa0040040:intron 30.0%
!! CTATTAGGTATGCTTTTTGT+GGG - chr1_1:70007454-70007473 Msa0040040:CDS 30.0%
CACAGGTTATTTACATTTGA+AGG - chr1_1:70007974-70007993 Msa0040040:intron 30.0%
ATTCATTTGTACGCGAAATA+TGG - chr1_1:70008012-70008031 Msa0040040:intron 30.0%
ACAAGTTTGATAAGACCAAT+GGG + chr1_1:70008076-70008095 None:intergenic 30.0%
TACAAGTTTGATAAGACCAA+TGG + chr1_1:70008077-70008096 None:intergenic 30.0%
TGTACCAATTACCATAAATC+AGG - chr1_1:70008166-70008185 Msa0040040:intron 30.0%
AGATCTCAGTAACGAAAATA+TGG + chr1_1:70008409-70008428 None:intergenic 30.0%
AAGTCAAAAAAAAAAAGGGG+GGG + chr1_1:70008443-70008462 None:intergenic 30.0%
!!! TTTTTTTTTGACTTACCAGG+GGG - chr1_1:70008449-70008468 Msa0040040:intron 30.0%
ATGACACATCAATGAATGAT+CGG + chr1_1:70008532-70008551 None:intergenic 30.0%
GATTGTATGATGACTTTAGA+TGG - chr1_1:70008602-70008621 Msa0040040:CDS 30.0%
GACAGAAGAAGTTATTGTAA+AGG - chr1_1:70008640-70008659 Msa0040040:CDS 30.0%
!!! TATTCTTTTTTGGCCACAAA+AGG - chr1_1:70008685-70008704 Msa0040040:CDS 30.0%
TGAATGCTTTATGAATACAC+AGG - chr1_1:70008746-70008765 Msa0040040:CDS 30.0%
AGGTTCTTCAAATTCTTCAT+TGG - chr1_1:70008829-70008848 Msa0040040:CDS 30.0%
! TTTTCAATCACAAGTCACTA+AGG - chr1_1:70008937-70008956 Msa0040040:CDS 30.0%
! GTACTGTGCTAATTTGTATT+AGG + chr1_1:70009088-70009107 None:intergenic 30.0%
! ACTTTTGCATTAAATAGCCA+AGG + chr1_1:70009553-70009572 None:intergenic 30.0%
TGTAATGAAAGTAGATGAGA+AGG - chr1_1:70009609-70009628 Msa0040040:CDS 30.0%
AAGCAACCTGCATATAAAAA+GGG + chr1_1:70009724-70009743 None:intergenic 30.0%
TAAACCTATTGTGATTCAGT+GGG - chr1_1:70009965-70009984 Msa0040040:intron 30.0%
TAACAGTTCCTTTATATCCT+TGG + chr1_1:70010427-70010446 None:intergenic 30.0%
ATAAAGGAACTGTTATGAAG+TGG - chr1_1:70010432-70010451 Msa0040040:CDS 30.0%
TAAAGGAACTGTTATGAAGT+GGG - chr1_1:70010433-70010452 Msa0040040:CDS 30.0%
AACCATACGAAACTATTGTT+TGG - chr1_1:70010540-70010559 Msa0040040:CDS 30.0%
GGGAAATATGTAAATACTAC+AGG + chr1_1:70010574-70010593 None:intergenic 30.0%
TTGAAACTTAACAGTACCAT+GGG + chr1_1:70010594-70010613 None:intergenic 30.0%
! GGATGGTGATTTTAAACATA+AGG - chr1_1:70010653-70010672 Msa0040040:intron 30.0%
!!! CTTATAGGTTTTTTCAGCTA+TGG - chr1_1:70010776-70010795 Msa0040040:intron 30.0%
! ATTTTAAACAAAAGGGGTTG+TGG - chr1_1:70010841-70010860 Msa0040040:intron 30.0%
TGACGGAACAATTCATATTT+GGG - chr1_1:70011104-70011123 Msa0040040:intron 30.0%
! ATATTTGGGATAGTCAAACA+GGG - chr1_1:70011118-70011137 Msa0040040:intron 30.0%
ACAGATGCATACAAGTATAA+AGG + chr1_1:70011296-70011315 None:intergenic 30.0%
! GTTGATGCTTTTCAACTTAA+TGG - chr1_1:70011423-70011442 Msa0040040:CDS 30.0%
ATGGTTTATTTGTATTGCAC+AGG - chr1_1:70011442-70011461 Msa0040040:CDS 30.0%
AAATTGTTTGATGCAAAGAG+TGG - chr1_1:70011639-70011658 Msa0040040:CDS 30.0%
!! TCATGATGGATATGTAACAA+AGG - chr1_1:70011686-70011705 Msa0040040:CDS 30.0%
! TCAATGTCTTTGTTTACAGT+TGG - chr1_1:70011769-70011788 Msa0040040:CDS 30.0%
GTAGGTTTCTATGACATAAA+GGG + chr1_1:70011904-70011923 None:intergenic 30.0%
ATGCATATAATTGCACTCTA+GGG - chr1_1:70011968-70011987 Msa0040040:CDS 30.0%
! ATGATAACATACAAGAGTGT+AGG + chr1_1:70012050-70012069 None:intergenic 30.0%
! CGTCAATTAGTTTCTTCTTT+AGG + chr1_1:70012134-70012153 None:intergenic 30.0%
! AAGTTTTCTTTCGGATTTCT+GGG - chr1_1:70012159-70012178 Msa0040040:exon 30.0%
! GAATGACCTCTGAAAATAAT+GGG + chr1_1:70012241-70012260 None:intergenic 30.0%
! TGAATGACCTCTGAAAATAA+TGG + chr1_1:70012242-70012261 None:intergenic 30.0%
AATATCCAGTTTCTCCATTT+GGG - chr1_1:70012267-70012286 Msa0040040:five_prime_UTR 30.0%
GGGAAATTGAAATAACATCT+TGG + chr1_1:70012294-70012313 None:intergenic 30.0%
TTATTTCAATTTCCCGGAAT+AGG - chr1_1:70012299-70012318 Msa0040040:five_prime_UTR 30.0%
AAGAAATTCACATTCTACGT+GGG + chr1_1:70012391-70012410 None:intergenic 30.0%
AAAGAAATTCACATTCTACG+TGG + chr1_1:70012392-70012411 None:intergenic 30.0%
GAATCTATTTGAACAACCAA+AGG + chr1_1:70012418-70012437 None:intergenic 30.0%
ACTCTCCAGTAATAAATGAT+GGG - chr1_1:70012439-70012458 Msa0040040:five_prime_UTR 30.0%
! TGGAAACTGAAAGCTTTTTA+CGG + chr1_1:70012804-70012823 None:intergenic 30.0%
AGTTTCCATATTCAATTGCA+TGG - chr1_1:70012816-70012835 Msa0040040:five_prime_UTR 30.0%
GTTTCCATATTCAATTGCAT+GGG - chr1_1:70012817-70012836 Msa0040040:five_prime_UTR 30.0%
ATTATATGGTTTCATGACAC+AGG - chr1_1:70012919-70012938 Msa0040040:five_prime_UTR 30.0%
AGAAGAAACATAGAGTTTCT+GGG + chr1_1:70012966-70012985 None:intergenic 30.0%
CTCTATGTTTCTTCTGATAA+TGG - chr1_1:70012971-70012990 Msa0040040:five_prime_UTR 30.0%
ATAAGAAACAATCGAGAGAA+AGG + chr1_1:70013037-70013056 None:intergenic 30.0%
! TTCTCTCGATTGTTTCTTAT+TGG - chr1_1:70013037-70013056 Msa0040040:five_prime_UTR 30.0%
TTTCTTATTGGAACAGAAGA+TGG - chr1_1:70013049-70013068 Msa0040040:five_prime_UTR 30.0%
AACATCTGATTACACTAACC+TGG - chr1_1:70005727-70005746 Msa0040040:three_prime_UTR 35.0%
TCCAAGTTGTATTGAGTCTT+CGG + chr1_1:70005758-70005777 None:intergenic 35.0%
CCAATCAGACTTTAATGCAT+TGG + chr1_1:70005801-70005820 None:intergenic 35.0%
CCAATGCATTAAAGTCTGAT+TGG - chr1_1:70005798-70005817 Msa0040040:three_prime_UTR 35.0%
ATTGTACTTGCATGGTTTAG+GGG - chr1_1:70005859-70005878 Msa0040040:three_prime_UTR 35.0%
TCAGTCAACATGATATTGGA+CGG + chr1_1:70005905-70005924 None:intergenic 35.0%
ATTATGGAATGAACCTGTAC+TGG - chr1_1:70005946-70005965 Msa0040040:CDS 35.0%
GCTAAATTAGATTCCAGTAC+AGG + chr1_1:70005962-70005981 None:intergenic 35.0%
!! AATTTAGCTTTGCAAGAGAG+TGG - chr1_1:70005974-70005993 Msa0040040:CDS 35.0%
CTCATCTTAAACAGATTAGC+AGG - chr1_1:70006151-70006170 Msa0040040:intron 35.0%
TAAACAGATTAGCAGGAAGA+AGG - chr1_1:70006158-70006177 Msa0040040:intron 35.0%
GCATTACTGGATGAAATGTA+TGG + chr1_1:70006192-70006211 None:intergenic 35.0%
ATTTCATCCAGTAATGCCTT+GGG - chr1_1:70006195-70006214 Msa0040040:intron 35.0%
CCTACATCACAATTATCATC+TGG + chr1_1:70006241-70006260 None:intergenic 35.0%
CCAGATGATAATTGTGATGT+AGG - chr1_1:70006238-70006257 Msa0040040:intron 35.0%
ATGATAATTGTGATGTAGGG+TGG - chr1_1:70006242-70006261 Msa0040040:intron 35.0%
CATTCATCTGATACATGATG+AGG + chr1_1:70006346-70006365 None:intergenic 35.0%
AGATGAATGTCTGTCTGAAT+TGG - chr1_1:70006357-70006376 Msa0040040:intron 35.0%
! ATTGTGACCCCCAAATTTTT+CGG - chr1_1:70006521-70006540 Msa0040040:intron 35.0%
ATGTACGGACCGAAAAATTT+GGG + chr1_1:70006533-70006552 None:intergenic 35.0%
! TGATTTGGCTATACCTTCTT+GGG - chr1_1:70006564-70006583 Msa0040040:intron 35.0%
TAAATTGCATCGTGATGCAT+TGG - chr1_1:70006609-70006628 Msa0040040:intron 35.0%
GTGATGCATTGGAAAGTAAT+AGG - chr1_1:70006620-70006639 Msa0040040:intron 35.0%
! TGTCATTTCAACTACATCAC+TGG - chr1_1:70006644-70006663 Msa0040040:intron 35.0%
ATCTTTGGCTACAAAATGTC+TGG - chr1_1:70006676-70006695 Msa0040040:CDS 35.0%
AACGTTCTTAGCAACAATTG+CGG + chr1_1:70006707-70006726 None:intergenic 35.0%
GAACGTTATGCTTACTCAAT+CGG - chr1_1:70006720-70006739 Msa0040040:CDS 35.0%
ATTACATGTTATTCTGGCAG+TGG + chr1_1:70006812-70006831 None:intergenic 35.0%
ACTGCCAGAATAACATGTAA+TGG - chr1_1:70006811-70006830 Msa0040040:intron 35.0%
CTGCCAGAATAACATGTAAT+GGG - chr1_1:70006812-70006831 Msa0040040:intron 35.0%
TGACCCATTACATGTTATTC+TGG + chr1_1:70006818-70006837 None:intergenic 35.0%
CATTGTTTGGGTCAAAACTT+TGG + chr1_1:70006851-70006870 None:intergenic 35.0%
AACTGCGTATCTACAAGAAT+TGG - chr1_1:70006902-70006921 Msa0040040:intron 35.0%
!!! ATTTTTAGTGAATGTCCCTG+CGG + chr1_1:70007033-70007052 None:intergenic 35.0%
CATATGAAAGAGGAAGATGA+AGG - chr1_1:70007125-70007144 Msa0040040:intron 35.0%
CTCATTGGAAATATACTTGG+AGG - chr1_1:70007292-70007311 Msa0040040:intron 35.0%
TTGGAAATATACTTGGAGGA+TGG - chr1_1:70007296-70007315 Msa0040040:intron 35.0%
ACAAGTATTCTAACATGAGG+AGG + chr1_1:70007350-70007369 None:intergenic 35.0%
TCGACAAGTATTCTAACATG+AGG + chr1_1:70007353-70007372 None:intergenic 35.0%
ATGCATGTGTTTGACCTATT+AGG - chr1_1:70007439-70007458 Msa0040040:CDS 35.0%
! CCACAAAAAGCATACCTAAT+AGG + chr1_1:70007456-70007475 None:intergenic 35.0%
!! CCTATTAGGTATGCTTTTTG+TGG - chr1_1:70007453-70007472 Msa0040040:CDS 35.0%
! TTTTCTATATAGGAGGCCAT+CGG - chr1_1:70007514-70007533 Msa0040040:CDS 35.0%
! AGGTGAATCCAGAAGAATTT+TGG + chr1_1:70007540-70007559 None:intergenic 35.0%
! TAGGAGGACTTGATTGTTTT+CGG + chr1_1:70007569-70007588 None:intergenic 35.0%
ATGGGCATACATACTACTAA+AGG - chr1_1:70007760-70007779 Msa0040040:CDS 35.0%
! AACATCTTTTTGCAGAACAC+AGG - chr1_1:70007957-70007976 Msa0040040:CDS 35.0%
! GATGCAGCTGAATTTTTATC+CGG + chr1_1:70008107-70008126 None:intergenic 35.0%
AAAGCAAAACACATCACTGA+AGG + chr1_1:70008212-70008231 None:intergenic 35.0%
ACTAATGGTATCACCTAAGT+GGG + chr1_1:70008252-70008271 None:intergenic 35.0%
AGTCAAAAAAAAAAAGGGGG+GGG + chr1_1:70008442-70008461 None:intergenic 35.0%
!! CTGGTATTTAAAGCCTTTTG+TGG + chr1_1:70008701-70008720 None:intergenic 35.0%
ACATAAGTTGCATACACGTT+GGG - chr1_1:70008769-70008788 Msa0040040:CDS 35.0%
GGTTCTTATGCAGAAACATA+TGG - chr1_1:70008791-70008810 Msa0040040:CDS 35.0%
TATGGAAATTACTGTGCTTC+AGG - chr1_1:70008809-70008828 Msa0040040:CDS 35.0%
!!! TTTTAGAGCGATTGAATCCA+AGG + chr1_1:70008880-70008899 None:intergenic 35.0%
! TTGGATTCAATCGCTCTAAA+AGG - chr1_1:70008879-70008898 Msa0040040:CDS 35.0%
CTTAGATTTACCCTTTACGA+AGG - chr1_1:70008905-70008924 Msa0040040:CDS 35.0%
AGCAAAATGTCCTTCGTAAA+GGG + chr1_1:70008918-70008937 None:intergenic 35.0%
AAGCAAAATGTCCTTCGTAA+AGG + chr1_1:70008919-70008938 None:intergenic 35.0%
AATGATTGAGATATGTGCCT+TGG - chr1_1:70009034-70009053 Msa0040040:intron 35.0%
GCACAGCGCTAAAAAAAATT+TGG + chr1_1:70009118-70009137 None:intergenic 35.0%
CAATTTAAGCAACTAGTCAG+TGG + chr1_1:70009235-70009254 None:intergenic 35.0%
TTCTCCCAGGAAATTTCTAA+AGG - chr1_1:70009389-70009408 Msa0040040:intron 35.0%
! CGAACCTTTAGAAATTTCCT+GGG + chr1_1:70009396-70009415 None:intergenic 35.0%
! TCGAACCTTTAGAAATTTCC+TGG + chr1_1:70009397-70009416 None:intergenic 35.0%
!! GTCCCCTCCAATTTTTAATT+TGG + chr1_1:70009447-70009466 None:intergenic 35.0%
AATAACTCTAGGTAAAGGAG+AGG - chr1_1:70009575-70009594 Msa0040040:CDS 35.0%
! TTTTTCGTGAGGCATATTAG+TGG - chr1_1:70009663-70009682 Msa0040040:CDS 35.0%
AGCAACCTGCATATAAAAAG+GGG + chr1_1:70009723-70009742 None:intergenic 35.0%
GAAGCAACCTGCATATAAAA+AGG + chr1_1:70009725-70009744 None:intergenic 35.0%
ATGATACCTTCCAGTTATGA+CGG + chr1_1:70009836-70009855 None:intergenic 35.0%
CTAAACCTATTGTGATTCAG+TGG - chr1_1:70009964-70009983 Msa0040040:intron 35.0%
TATTCCCACTGAATCACAAT+AGG + chr1_1:70009972-70009991 None:intergenic 35.0%
! CAGCAAAGTTGTTGCTTAAT+GGG - chr1_1:70010078-70010097 Msa0040040:intron 35.0%
! AGCAAAGTTGTTGCTTAATG+GGG - chr1_1:70010079-70010098 Msa0040040:intron 35.0%
TTCCTTCTTGCATTACTACT+GGG + chr1_1:70010187-70010206 None:intergenic 35.0%
ATTCCTTCTTGCATTACTAC+TGG + chr1_1:70010188-70010207 None:intergenic 35.0%
TCCAAAAAGATGATCTTCCA+TGG - chr1_1:70010297-70010316 Msa0040040:intron 35.0%
! TCCATGGAAGATCATCTTTT+TGG + chr1_1:70010301-70010320 None:intergenic 35.0%
TGAATCTACCGTTTATACTG+CGG - chr1_1:70010394-70010413 Msa0040040:CDS 35.0%
CACCAAACAATAGTTTCGTA+TGG + chr1_1:70010545-70010564 None:intergenic 35.0%
GTTGAAACTTAACAGTACCA+TGG + chr1_1:70010595-70010614 None:intergenic 35.0%
AACTACAAAGTGAAGTGTGA+TGG - chr1_1:70010632-70010651 Msa0040040:intron 35.0%
! ATTTTAAACATAAGGGGCAG+TGG - chr1_1:70010661-70010680 Msa0040040:intron 35.0%
CAAGGAGTAATTGTTATGAC+TGG + chr1_1:70010919-70010938 None:intergenic 35.0%
AAATTGAAAAGCCACTTGAG+CGG + chr1_1:70010973-70010992 None:intergenic 35.0%
TTTCTACGGTAACTTATCCT+AGG - chr1_1:70010998-70011017 Msa0040040:CDS 35.0%
TTTATCATCTAGTGGAAGAG+TGG - chr1_1:70011074-70011093 Msa0040040:intron 35.0%
! GTGACGGAACAATTCATATT+TGG - chr1_1:70011103-70011122 Msa0040040:intron 35.0%
! CATATTTGGGATAGTCAAAC+AGG - chr1_1:70011117-70011136 Msa0040040:intron 35.0%
TCAAATTAAGGACATTTGCC+TGG + chr1_1:70011230-70011249 None:intergenic 35.0%
TCAAAAGCTTCATATCTGGA+GGG - chr1_1:70011485-70011504 Msa0040040:CDS 35.0%
AGTTGCAATTAAAGATGGTG+AGG + chr1_1:70011598-70011617 None:intergenic 35.0%
TGTGCAGTTGCAATTAAAGA+TGG + chr1_1:70011603-70011622 None:intergenic 35.0%
! GGATATGTAACAAAGGTATG+TGG - chr1_1:70011693-70011712 Msa0040040:CDS 35.0%
GACATAAAGGGTGATAAGAT+AGG + chr1_1:70011892-70011911 None:intergenic 35.0%
CGTAGGTTTCTATGACATAA+AGG + chr1_1:70011905-70011924 None:intergenic 35.0%
TTATGTCATAGAAACCTACG+TGG - chr1_1:70011905-70011924 Msa0040040:CDS 35.0%
GATGCATATAATTGCACTCT+AGG - chr1_1:70011967-70011986 Msa0040040:CDS 35.0%
! GACGATGACAAGTTTTCTTT+CGG - chr1_1:70012150-70012169 Msa0040040:exon 35.0%
! CAAGTTTTCTTTCGGATTTC+TGG - chr1_1:70012158-70012177 Msa0040040:exon 35.0%
GTAATAAAGAGATGAGCTAC+AGG + chr1_1:70012194-70012213 None:intergenic 35.0%
CATCTCTTTATTACTCATGC+AGG - chr1_1:70012200-70012219 Msa0040040:five_prime_UTR 35.0%
! ATTTTCAGAGGTCATTCAGA+TGG - chr1_1:70012244-70012263 Msa0040040:five_prime_UTR 35.0%
GAATATCCAGTTTCTCCATT+TGG - chr1_1:70012266-70012285 Msa0040040:five_prime_UTR 35.0%
ATATCCAGTTTCTCCATTTG+GGG - chr1_1:70012268-70012287 Msa0040040:five_prime_UTR 35.0%
TTCAATGGCAGATTTAGACA+GGG + chr1_1:70012338-70012357 None:intergenic 35.0%
TTTCAATGGCAGATTTAGAC+AGG + chr1_1:70012339-70012358 None:intergenic 35.0%
GTCTAAATCTGCCATTGAAA+CGG - chr1_1:70012339-70012358 Msa0040040:five_prime_UTR 35.0%
CATCATTTATTACTGGAGAG+TGG + chr1_1:70012440-70012459 None:intergenic 35.0%
CACTCTCCAGTAATAAATGA+TGG - chr1_1:70012438-70012457 Msa0040040:five_prime_UTR 35.0%
GGAATCTATTTGAACAGCAT+TGG + chr1_1:70012504-70012523 None:intergenic 35.0%
CATCATTTATTACTGGAGAG+TGG + chr1_1:70012440-70012459 None:intergenic 35.0%
CACTCTCCAGTAATAAATGA+TGG - chr1_1:70012438-70012457 Msa0040040:five_prime_UTR 35.0%
TCTATTAAGAGATGATTGGC+AGG + chr1_1:70012583-70012602 None:intergenic 35.0%
TTGTGGAAGATTATGTACCA+AGG - chr1_1:70012747-70012766 Msa0040040:five_prime_UTR 35.0%
TGTGGAAGATTATGTACCAA+GGG - chr1_1:70012748-70012767 Msa0040040:five_prime_UTR 35.0%
! AAGAAACATAGAGTTTCTGG+GGG + chr1_1:70012964-70012983 None:intergenic 35.0%
GAAGAAACATAGAGTTTCTG+GGG + chr1_1:70012965-70012984 None:intergenic 35.0%
CAGAAGAAACATAGAGTTTC+TGG + chr1_1:70012967-70012986 None:intergenic 35.0%
GAAGACTTGAGATTAACACA+CGG + chr1_1:70013193-70013212 None:intergenic 35.0%
TCCGAAGACTCAATACAACT+TGG - chr1_1:70005754-70005773 Msa0040040:three_prime_UTR 40.0%
! TCTGCCTTATTGTACTTGCA+TGG - chr1_1:70005851-70005870 Msa0040040:three_prime_UTR 40.0%
GGACGGACATATATTACCAT+GGG + chr1_1:70005888-70005907 None:intergenic 40.0%
TGGACGGACATATATTACCA+TGG + chr1_1:70005889-70005908 None:intergenic 40.0%
CGAGTCAGTCAACATGATAT+TGG + chr1_1:70005909-70005928 None:intergenic 40.0%
!! TCATGTTGACTGACTCGTTA+TGG - chr1_1:70005912-70005931 Msa0040040:three_prime_UTR 40.0%
!! ATTCTAGCTTTCATCAGTGG+TGG - chr1_1:70006098-70006117 Msa0040040:intron 40.0%
CATTTCATCCAGTAATGCCT+TGG - chr1_1:70006194-70006213 Msa0040040:intron 40.0%
GAGCTAAAATCAACAACCCA+AGG + chr1_1:70006214-70006233 None:intergenic 40.0%
GAGACTTAAGCAAGAGCAAA+TGG - chr1_1:70006266-70006285 Msa0040040:intron 40.0%
AGGGATTTCAGACGTTGAAT+AGG + chr1_1:70006326-70006345 None:intergenic 40.0%
TCTGCAGCTATAAAGCAAGA+AGG - chr1_1:70006383-70006402 Msa0040040:intron 40.0%
AATATCCTTCCTCAATGCAG+AGG - chr1_1:70006458-70006477 Msa0040040:intron 40.0%
!! AACTCTGGAATGCATTCATC+AGG + chr1_1:70006499-70006518 None:intergenic 40.0%
TGTACGGACCGAAAAATTTG+GGG + chr1_1:70006532-70006551 None:intergenic 40.0%
CATGTACGGACCGAAAAATT+TGG + chr1_1:70006534-70006553 None:intergenic 40.0%
!! ATTTTTCGGTCCGTACATGA+TGG - chr1_1:70006535-70006554 Msa0040040:intron 40.0%
ATCAGCCATACCATCATGTA+CGG + chr1_1:70006548-70006567 None:intergenic 40.0%
ACATGATGGTATGGCTGATT+TGG - chr1_1:70006549-70006568 Msa0040040:intron 40.0%
!! CTGATTTGGCTATACCTTCT+TGG - chr1_1:70006563-70006582 Msa0040040:intron 40.0%
CTCGCTGCATTTCATTGTTT+GGG + chr1_1:70006863-70006882 None:intergenic 40.0%
TCTCGCTGCATTTCATTGTT+TGG + chr1_1:70006864-70006883 None:intergenic 40.0%
! GGAACAAGCATCTGCATTTT+CGG - chr1_1:70006923-70006942 Msa0040040:intron 40.0%
AAGGAAGAACATCTCATCTC+TGG - chr1_1:70006998-70007017 Msa0040040:intron 40.0%
AGGAAGAACATCTCATCTCT+GGG - chr1_1:70006999-70007018 Msa0040040:intron 40.0%
! TTGCCTCTGAAGATATTGCA+AGG - chr1_1:70007204-70007223 Msa0040040:CDS 40.0%
! TGCCTCTGAAGATATTGCAA+GGG - chr1_1:70007205-70007224 Msa0040040:CDS 40.0%
! GCAAGGGACATATTTTCTGT+CGG - chr1_1:70007221-70007240 Msa0040040:CDS 40.0%
!! ATTTTCTGTCGGTTGTCTCT+TGG - chr1_1:70007232-70007251 Msa0040040:intron 40.0%
AACATTACCAGGATTTCTGC+AGG - chr1_1:70007319-70007338 Msa0040040:intron 40.0%
AAGCATGCATCCAAAAGGAT+TGG - chr1_1:70007372-70007391 Msa0040040:CDS 40.0%
! GATACCTCATCCAATCCTTT+TGG + chr1_1:70007385-70007404 None:intergenic 40.0%
AAGTGGAGCAAGAAACAAGT+AGG + chr1_1:70007588-70007607 None:intergenic 40.0%
TCTTTAGCAACAAGCTGAAG+TGG + chr1_1:70007605-70007624 None:intergenic 40.0%
CTCGCAACATTCACTATAAG+TGG + chr1_1:70007725-70007744 None:intergenic 40.0%
GAGTGATACTGAAGCTGAAT+GGG - chr1_1:70007742-70007761 Msa0040040:CDS 40.0%
AAATTCAGCTGCATCTGCTT+CGG - chr1_1:70008112-70008131 Msa0040040:intron 40.0%
! TAAGTGGGAGTACATTCATG+TGG + chr1_1:70008237-70008256 None:intergenic 40.0%
ACATGAATGTACTCCCACTT+AGG - chr1_1:70008236-70008255 Msa0040040:intron 40.0%
CACTAATGGTATCACCTAAG+TGG + chr1_1:70008253-70008272 None:intergenic 40.0%
TTTCCCAAAGCAGTGAACAA+GGG + chr1_1:70008315-70008334 None:intergenic 40.0%
! ATTGATGTGCTGGTCAGAAT+TGG - chr1_1:70008353-70008372 Msa0040040:intron 40.0%
!!! ACTTACCAGGGGGTATTTTT+GGG - chr1_1:70008459-70008478 Msa0040040:intron 40.0%
!! CGGACGACATTTTTCAGTAA+TGG + chr1_1:70008512-70008531 None:intergenic 40.0%
CTTCTGTCAAGAAAGCTACA+AGG + chr1_1:70008628-70008647 None:intergenic 40.0%
GACATAAGTTGCATACACGT+TGG - chr1_1:70008768-70008787 Msa0040040:CDS 40.0%
CATAAGTTGCATACACGTTG+GGG - chr1_1:70008770-70008789 Msa0040040:CDS 40.0%
AGCGATTGAATCCAAGGAAA+GGG + chr1_1:70008874-70008893 None:intergenic 40.0%
! CTTAGTTGCCTTCTGTTTTC+AGG - chr1_1:70009265-70009284 Msa0040040:CDS 40.0%
GTTGCTGCTAATACTCTCTT+TGG - chr1_1:70009287-70009306 Msa0040040:intron 40.0%
!! CTCTCTTTGGAATTTGTCAG+CGG - chr1_1:70009300-70009319 Msa0040040:intron 40.0%
! TTTGGAATTTGTCAGCGGAT+TGG - chr1_1:70009305-70009324 Msa0040040:intron 40.0%
TCCAAACTGAATTCCAGAGT+AGG - chr1_1:70009503-70009522 Msa0040040:intron 40.0%
!! ACCTACTCTGGAATTCAGTT+TGG + chr1_1:70009507-70009526 None:intergenic 40.0%
!! TTCCAGAGTAGGTTTTATGC+TGG - chr1_1:70009514-70009533 Msa0040040:intron 40.0%
!! TCCAGAGTAGGTTTTATGCT+GGG - chr1_1:70009515-70009534 Msa0040040:intron 40.0%
CATTAAATAGCCAAGGAGAG+CGG + chr1_1:70009546-70009565 None:intergenic 40.0%
! CTGAACCCCTTTTTATATGC+AGG - chr1_1:70009715-70009734 Msa0040040:CDS 40.0%
! ACCTTGTTTGCATCTCTTCT+TGG - chr1_1:70009750-70009769 Msa0040040:intron 40.0%
! CCTTGTTTGCATCTCTTCTT+GGG - chr1_1:70009751-70009770 Msa0040040:intron 40.0%
TTCGTCAATGTTGTGCTACA+TGG - chr1_1:70009784-70009803 Msa0040040:intron 40.0%
GTATTCAGATGTGAATCCCT+GGG + chr1_1:70010054-70010073 None:intergenic 40.0%
TGTATTCAGATGTGAATCCC+TGG + chr1_1:70010055-70010074 None:intergenic 40.0%
CCATTAAGCAACAACTTTGC+TGG + chr1_1:70010080-70010099 None:intergenic 40.0%
! CCAGCAAAGTTGTTGCTTAA+TGG - chr1_1:70010077-70010096 Msa0040040:intron 40.0%
! AAGTTGTTGCTTAATGGGGT+TGG - chr1_1:70010083-70010102 Msa0040040:intron 40.0%
! TGAACCATGAACCATGGTTT+TGG - chr1_1:70010219-70010238 Msa0040040:CDS 40.0%
! ACAGATGCTCTGATTTTCCA+TGG + chr1_1:70010317-70010336 None:intergenic 40.0%
GAATCTACCGTTTATACTGC+GGG - chr1_1:70010395-70010414 Msa0040040:CDS 40.0%
GGAATTGGCCAAGGATATAA+AGG - chr1_1:70010416-70010435 Msa0040040:CDS 40.0%
TGAAGAAACTAACCTCCTCA+TGG + chr1_1:70010496-70010515 None:intergenic 40.0%
! ACAAAGTGAAGTGTGATGGA+TGG - chr1_1:70010636-70010655 Msa0040040:intron 40.0%
TTAGTGTAGCCAATCATGAC+AGG - chr1_1:70010727-70010746 Msa0040040:intron 40.0%
TATAAGCACAGCTCAACTCA+AGG + chr1_1:70010762-70010781 None:intergenic 40.0%
!! TTGAGTTGAGCTGTGCTTAT+AGG - chr1_1:70010761-70010780 Msa0040040:intron 40.0%
!!! TGTAGTTTTTTCCGCTCAAG+TGG - chr1_1:70010959-70010978 Msa0040040:CDS 40.0%
! AGTATTTGCTGAGTCCGAAA+CGG - chr1_1:70011152-70011171 Msa0040040:intron 40.0%
!! TTTTTGGCACAGATGCTGAA+TGG + chr1_1:70011197-70011216 None:intergenic 40.0%
TCTGCTGAAACTCTTGTAGT+TGG - chr1_1:70011321-70011340 Msa0040040:CDS 40.0%
GAGGTCAAAAGCTTCATATC+TGG - chr1_1:70011481-70011500 Msa0040040:CDS 40.0%
GTCAAAAGCTTCATATCTGG+AGG - chr1_1:70011484-70011503 Msa0040040:CDS 40.0%
CAAAAGCTTCATATCTGGAG+GGG - chr1_1:70011486-70011505 Msa0040040:CDS 40.0%
AAAAGCTTCATATCTGGAGG+GGG - chr1_1:70011487-70011506 Msa0040040:CDS 40.0%
ATTTCTGCTGTATGTTCCTC+TGG - chr1_1:70011540-70011559 Msa0040040:intron 40.0%
TGCAATTAAAGATGGTGAGG+TGG + chr1_1:70011595-70011614 None:intergenic 40.0%
ATTGCAACTGCACAAAGTTC+TGG - chr1_1:70011609-70011628 Msa0040040:intron 40.0%
GAAATAAGCAGATGTTCCTC+AGG + chr1_1:70011800-70011819 None:intergenic 40.0%
GTGGAGTTTATAAACCACGT+AGG + chr1_1:70011922-70011941 None:intergenic 40.0%
!! CTGAAAATAATGGGCTGTGA+TGG + chr1_1:70012232-70012251 None:intergenic 40.0%
! TCACAGCCCATTATTTTCAG+AGG - chr1_1:70012232-70012251 Msa0040040:five_prime_UTR 40.0%
AATAACATCTTGGCCCCAAA+TGG + chr1_1:70012284-70012303 None:intergenic 40.0%
TCAATTTCCCGGAATAGGAT+TGG - chr1_1:70012304-70012323 Msa0040040:five_prime_UTR 40.0%
CAATTTCCCGGAATAGGATT+GGG - chr1_1:70012305-70012324 Msa0040040:five_prime_UTR 40.0%
AAAGAAGCCCAATCCTATTC+CGG + chr1_1:70012315-70012334 None:intergenic 40.0%
! TGAGAAGCATACCGTTTCAA+TGG + chr1_1:70012353-70012372 None:intergenic 40.0%
CGGTATGCTTCTCATTTGTT+AGG - chr1_1:70012359-70012378 Msa0040040:five_prime_UTR 40.0%
!! TCTATTTGAACAGCATTGGC+AGG + chr1_1:70012500-70012519 None:intergenic 40.0%
TAAGAGATGATTGGCAGGAA+GGG + chr1_1:70012578-70012597 None:intergenic 40.0%
TTAAGAGATGATTGGCAGGA+AGG + chr1_1:70012579-70012598 None:intergenic 40.0%
! CAGCGGAGAGAGTATATTAA+GGG + chr1_1:70012656-70012675 None:intergenic 40.0%
! TCAGCGGAGAGAGTATATTA+AGG + chr1_1:70012657-70012676 None:intergenic 40.0%
GATACGTGTCATGATTTCAG+CGG + chr1_1:70012673-70012692 None:intergenic 40.0%
GGTACCCATGCAATTGAATA+TGG + chr1_1:70012824-70012843 None:intergenic 40.0%
CATCAAGCACAAAGGAATTC+AGG + chr1_1:70012854-70012873 None:intergenic 40.0%
ACAACTGACATCAAGCACAA+AGG + chr1_1:70012862-70012881 None:intergenic 40.0%
TATGGTTTCATGACACAGGA+TGG - chr1_1:70012923-70012942 Msa0040040:five_prime_UTR 40.0%
ATGGTTTCATGACACAGGAT+GGG - chr1_1:70012924-70012943 Msa0040040:five_prime_UTR 40.0%
TTGAGATTAACACACGGAGT+GGG + chr1_1:70013187-70013206 None:intergenic 40.0%
!! TGACTGACTCGTTATGGTCA+TGG - chr1_1:70005918-70005937 Msa0040040:three_prime_UTR 45.0%
!! GGCATTCTAGCTTTCATCAG+TGG - chr1_1:70006095-70006114 Msa0040040:intron 45.0%
! AGCTTTCATCAGTGGTGGAA+AGG - chr1_1:70006103-70006122 Msa0040040:intron 45.0%
ACAGATTAGCAGGAAGAAGG+TGG - chr1_1:70006161-70006180 Msa0040040:intron 45.0%
CAGATTAGCAGGAAGAAGGT+GGG - chr1_1:70006162-70006181 Msa0040040:intron 45.0%
AGATTAGCAGGAAGAAGGTG+GGG - chr1_1:70006163-70006182 Msa0040040:intron 45.0%
! TCAACAACCCAAGGCATTAC+TGG + chr1_1:70006205-70006224 None:intergenic 45.0%
GGCAAAAGGTGATGAACAGT+TGG - chr1_1:70006294-70006313 Msa0040040:intron 45.0%
GCCTCTTAGTGTTCTTCGAA+TGG - chr1_1:70006408-70006427 Msa0040040:intron 45.0%
GCCATTCGAAGAACACTAAG+AGG + chr1_1:70006412-70006431 None:intergenic 45.0%
TTGATAGAGCCTCTGCATTG+AGG + chr1_1:70006470-70006489 None:intergenic 45.0%
CAATGCAGAGGCTCTATCAA+TGG - chr1_1:70006470-70006489 Msa0040040:intron 45.0%
TGGGGGTCACAATAAAACTC+TGG + chr1_1:70006514-70006533 None:intergenic 45.0%
GTACGGACCGAAAAATTTGG+GGG + chr1_1:70006531-70006550 None:intergenic 45.0%
TCCACAATGCCAAGATCAAC+AGG - chr1_1:70006745-70006764 Msa0040040:CDS 45.0%
TCCTGTTGATCTTGGCATTG+TGG + chr1_1:70006749-70006768 None:intergenic 45.0%
! CTGCATTTTCGGAACATGCT+AGG - chr1_1:70006934-70006953 Msa0040040:intron 45.0%
! GAGGAAGATGAAGGCTTTTC+AGG - chr1_1:70007134-70007153 Msa0040040:intron 45.0%
! GATATCCAGACTTGCTTCTC+TGG - chr1_1:70007156-70007175 Msa0040040:intron 45.0%
GTCCCTTGCAATATCTTCAG+AGG + chr1_1:70007210-70007229 None:intergenic 45.0%
TTGGAGGATGGAACATTACC+AGG - chr1_1:70007308-70007327 Msa0040040:intron 45.0%
TGTCGAAGCATGCATCCAAA+AGG - chr1_1:70007367-70007386 Msa0040040:CDS 45.0%
GCATCCAAAAGGATTGGATG+AGG - chr1_1:70007378-70007397 Msa0040040:CDS 45.0%
!! TCCAGAAGAATTTTGGCCGA+TGG + chr1_1:70007533-70007552 None:intergenic 45.0%
TGGAGCAAGAAACAAGTAGG+AGG + chr1_1:70007585-70007604 None:intergenic 45.0%
TGCTGCAAATCTTGCAAAGC+AGG - chr1_1:70007643-70007662 Msa0040040:intron 45.0%
GCTGCAAATCTTGCAAAGCA+GGG - chr1_1:70007644-70007663 Msa0040040:intron 45.0%
CGAGTGATACTGAAGCTGAA+TGG - chr1_1:70007741-70007760 Msa0040040:CDS 45.0%
!! ATGGAACCGAGTTGGTAAAC+AGG - chr1_1:70008031-70008050 Msa0040040:intron 45.0%
GGTATGCCTGTTTACCAACT+CGG + chr1_1:70008040-70008059 None:intergenic 45.0%
!! AGTTGGTAAACAGGCATACC+TGG - chr1_1:70008040-70008059 Msa0040040:intron 45.0%
CCAATGGGTGAATAGTTTCC+AGG + chr1_1:70008061-70008080 None:intergenic 45.0%
CCTGGAAACTATTCACCCAT+TGG - chr1_1:70008058-70008077 Msa0040040:intron 45.0%
!! TCTGCTTCGGTGCTACTAAT+TGG - chr1_1:70008125-70008144 Msa0040040:intron 45.0%
! GCTACTAATTGGTTCCAGTG+AGG - chr1_1:70008136-70008155 Msa0040040:intron 45.0%
! ATTGGTTCCAGTGAGGAGAT+TGG - chr1_1:70008143-70008162 Msa0040040:intron 45.0%
TTCCCAAAGCAGTGAACAAG+GGG + chr1_1:70008314-70008333 None:intergenic 45.0%
CTTTCCCAAAGCAGTGAACA+AGG + chr1_1:70008316-70008335 None:intergenic 45.0%
!! CTTGTTCACTGCTTTGGGAA+AGG - chr1_1:70008314-70008333 Msa0040040:intron 45.0%
GGGAAAGGACTATGTGTAGA+TGG - chr1_1:70008329-70008348 Msa0040040:intron 45.0%
!! TGTAGATGGCATTGATGTGC+TGG - chr1_1:70008343-70008362 Msa0040040:intron 45.0%
!!! GACTTACCAGGGGGTATTTT+TGG - chr1_1:70008458-70008477 Msa0040040:intron 45.0%
!!! CTTACCAGGGGGTATTTTTG+GGG - chr1_1:70008460-70008479 Msa0040040:intron 45.0%
AAAGAACTCCAACTCTGGAC+AGG + chr1_1:70008572-70008591 None:intergenic 45.0%
GTGCTAAAGAACTCCAACTC+TGG + chr1_1:70008577-70008596 None:intergenic 45.0%
GCGATTGAATCCAAGGAAAG+GGG + chr1_1:70008873-70008892 None:intergenic 45.0%
GAGCGATTGAATCCAAGGAA+AGG + chr1_1:70008875-70008894 None:intergenic 45.0%
GTGCGATGCTTAGTTTCGAA+AGG + chr1_1:70009066-70009085 None:intergenic 45.0%
! TGGCTTGTATCTTCGTACTG+TGG - chr1_1:70009171-70009190 Msa0040040:intron 45.0%
CAACTAGTCAGTGGACAAGA+TGG + chr1_1:70009226-70009245 None:intergenic 45.0%
AGCAGCAACCTGAAAACAGA+AGG + chr1_1:70009276-70009295 None:intergenic 45.0%
TCTAAAGGTTCGACTGCTGT+CGG - chr1_1:70009404-70009423 Msa0040040:intron 45.0%
CTTCCAAATTGAGAGTCGCA+TGG - chr1_1:70009466-70009485 Msa0040040:intron 45.0%
GATCCATGCGACTCTCAATT+TGG + chr1_1:70009472-70009491 None:intergenic 45.0%
TCCCAGCATAAAACCTACTC+TGG + chr1_1:70009519-70009538 None:intergenic 45.0%
CCCAAGAAGAGATGCAAACA+AGG + chr1_1:70009754-70009773 None:intergenic 45.0%
AACTTCTACGCCGTCATAAC+TGG - chr1_1:70009823-70009842 Msa0040040:intron 45.0%
GTGATTCAGTGGGAATATGC+AGG - chr1_1:70009975-70009994 Msa0040040:intron 45.0%
! TGTTGCTTAATGGGGTTGGA+TGG - chr1_1:70010087-70010106 Msa0040040:intron 45.0%
ATGGTCAATTCCACAATCCC+AGG - chr1_1:70010106-70010125 Msa0040040:intron 45.0%
TGGTCAATTCCACAATCCCA+GGG - chr1_1:70010107-70010126 Msa0040040:intron 45.0%
!! GGGCTTTGGTGAGCTTTAAA+TGG + chr1_1:70010167-70010186 None:intergenic 45.0%
CTTGCATTACTACTGGGCTT+TGG + chr1_1:70010181-70010200 None:intergenic 45.0%
AGCCCAGTAGTAATGCAAGA+AGG - chr1_1:70010182-70010201 Msa0040040:intron 45.0%
ACCAAGTGAACCATGAACCA+TGG - chr1_1:70010213-70010232 Msa0040040:CDS 45.0%
ACCATGGTTCATGGTTCACT+TGG + chr1_1:70010217-70010236 None:intergenic 45.0%
GGAACCAAAACCATGGTTCA+TGG + chr1_1:70010226-70010245 None:intergenic 45.0%
! CATCTTTTTGGATTCCCACC+CGG + chr1_1:70010289-70010308 None:intergenic 45.0%
ACCGTTTATACTGCGGGAAT+TGG - chr1_1:70010401-70010420 Msa0040040:CDS 45.0%
GCCAATTCCCGCAGTATAAA+CGG + chr1_1:70010405-70010424 None:intergenic 45.0%
AACTGTCTGTCCGGCTATTA+TGG - chr1_1:70010470-70010489 Msa0040040:CDS 45.0%
!! ACAAGGGTACCTGTCATGAT+TGG + chr1_1:70010739-70010758 None:intergenic 45.0%
ACAGCTCAACTCAAGGACAA+GGG + chr1_1:70010755-70010774 None:intergenic 45.0%
TACAAGCATAGCTCAGCTCA+AGG + chr1_1:70010943-70010962 None:intergenic 45.0%
ACAGATGCTGAATGGTTCGT+GGG + chr1_1:70011189-70011208 None:intergenic 45.0%
GCCAAAAATTACCAGTGACC+AGG - chr1_1:70011209-70011228 Msa0040040:intron 45.0%
! GCCTGGTCACTGGTAATTTT+TGG + chr1_1:70011213-70011232 None:intergenic 45.0%
GAAACTCTTGTAGTTGGCAC+TGG - chr1_1:70011327-70011346 Msa0040040:CDS 45.0%
! CTTGTAGTTGGCACTGGAAA+TGG - chr1_1:70011333-70011352 Msa0040040:CDS 45.0%
AGGTTCATTGATGTTGCTCG+AGG - chr1_1:70011462-70011481 Msa0040040:CDS 45.0%
AAAGCTTCATATCTGGAGGG+GGG - chr1_1:70011488-70011507 Msa0040040:CDS 45.0%
!! ATGTTCCTCTGGTTCTAGCA+AGG - chr1_1:70011551-70011570 Msa0040040:intron 45.0%
GTGGAAATGTCGTTGCTTCT+TGG - chr1_1:70011658-70011677 Msa0040040:CDS 45.0%
TTTACAGTTGGCATCACCTG+AGG - chr1_1:70011781-70011800 Msa0040040:CDS 45.0%
TCTGCTTATTTCCAGCTCTC+TGG - chr1_1:70011808-70011827 Msa0040040:CDS 45.0%
TAAAGTTCTGTCCAGAGAGC+TGG + chr1_1:70011822-70011841 None:intergenic 45.0%
TGGACAGAACTTTACGAGTC+TGG - chr1_1:70011828-70011847 Msa0040040:CDS 45.0%
GGACAGAACTTTACGAGTCT+GGG - chr1_1:70011829-70011848 Msa0040040:CDS 45.0%
AAGAAGCCCAATCCTATTCC+GGG + chr1_1:70012314-70012333 None:intergenic 45.0%
!! GAACAGCATTGGCAGGAAAA+GGG + chr1_1:70012493-70012512 None:intergenic 45.0%
!! TGAACAGCATTGGCAGGAAA+AGG + chr1_1:70012494-70012513 None:intergenic 45.0%
! CGGAGAGAGTATATTAAGGG+AGG + chr1_1:70012653-70012672 None:intergenic 45.0%
TCAATTGCATGGGTACCTTG+TGG - chr1_1:70012827-70012846 Msa0040040:five_prime_UTR 45.0%
CAATTGCATGGGTACCTTGT+GGG - chr1_1:70012828-70012847 Msa0040040:five_prime_UTR 45.0%
TGAGATTAACACACGGAGTG+GGG + chr1_1:70013186-70013205 None:intergenic 45.0%
CTTGAGATTAACACACGGAG+TGG + chr1_1:70013188-70013207 None:intergenic 45.0%
!!! TATAATTTTTTTTTCTATAT+AGG - chr1_1:70007504-70007523 Msa0040040:CDS 5.0%
!!! AAACTAATAAAATTTTATAT+GGG + chr1_1:70009887-70009906 None:intergenic 5.0%
!!! AAAACTAATAAAATTTTATA+TGG + chr1_1:70009888-70009907 None:intergenic 5.0%
!!! ATATTTATTTTTCAAAATTT+TGG - chr1_1:70012891-70012910 Msa0040040:five_prime_UTR 5.0%
!! ATTGAGTCTTCGGAAGCACC+AGG + chr1_1:70005748-70005767 None:intergenic 50.0%
CATGGTTTAGGGGTTTCCCA+TGG - chr1_1:70005869-70005888 Msa0040040:three_prime_UTR 50.0%
GATTAGCAGGAAGAAGGTGG+GGG - chr1_1:70006164-70006183 Msa0040040:intron 50.0%
ATTAGCAGGAAGAAGGTGGG+GGG - chr1_1:70006165-70006184 Msa0040040:intron 50.0%
AAGCAAGAGCAAATGGCGCT+TGG - chr1_1:70006273-70006292 Msa0040040:intron 50.0%
AGCAAATGGCGCTTGGCAAA+AGG - chr1_1:70006280-70006299 Msa0040040:intron 50.0%
TAGAGCCTCTGCATTGAGGA+AGG + chr1_1:70006466-70006485 None:intergenic 50.0%
TCGGTCCGTACATGATGGTA+TGG - chr1_1:70006540-70006559 Msa0040040:intron 50.0%
TGGCTACAAAATGTCTGGCC+AGG - chr1_1:70006681-70006700 Msa0040040:CDS 50.0%
TCTTAGCAACAATTGCGGCC+TGG + chr1_1:70006702-70006721 None:intergenic 50.0%
TGACGACGTCCTGTTGATCT+TGG + chr1_1:70006757-70006776 None:intergenic 50.0%
GACGTCGTCAGCTCTTTATG+CGG - chr1_1:70006767-70006786 Msa0040040:CDS 50.0%
ATGTTATTCTGGCAGTGGCG+TGG + chr1_1:70006807-70006826 None:intergenic 50.0%
TTAGTGAATGTCCCTGCGGT+TGG + chr1_1:70007029-70007048 None:intergenic 50.0%
! ATCCAGACTTGCTTCTCTGG+AGG - chr1_1:70007159-70007178 Msa0040040:intron 50.0%
GGTAGTTCCTGCAGAAATCC+TGG + chr1_1:70007329-70007348 None:intergenic 50.0%
GCCATCGGCCAAAATTCTTC+TGG - chr1_1:70007529-70007548 Msa0040040:CDS 50.0%
CGCGAAATATGGAACCGAGT+TGG - chr1_1:70008023-70008042 Msa0040040:intron 50.0%
TGGTACACCAATCTCCTCAC+TGG + chr1_1:70008153-70008172 None:intergenic 50.0%
TTGCCCCTTGTTCACTGCTT+TGG - chr1_1:70008308-70008327 Msa0040040:intron 50.0%
TGCCCCTTGTTCACTGCTTT+GGG - chr1_1:70008309-70008328 Msa0040040:intron 50.0%
GATTCCCCAAAAATACCCCC+TGG + chr1_1:70008467-70008486 None:intergenic 50.0%
! GTTTCGAAAGGCATGAGCCA+AGG + chr1_1:70009054-70009073 None:intergenic 50.0%
! TGATGAGCTTGCTTTCTCCC+AGG - chr1_1:70009376-70009395 Msa0040040:intron 50.0%
TCTACGCCGTCATAACTGGA+AGG - chr1_1:70009827-70009846 Msa0040040:intron 50.0%
TAGAAGACCTGCAATTGCCC+AGG - chr1_1:70010034-70010053 Msa0040040:intron 50.0%
AGAAGACCTGCAATTGCCCA+GGG - chr1_1:70010035-70010054 Msa0040040:intron 50.0%
TTTGGCACCTCTACTTCCCT+GGG + chr1_1:70010126-70010145 None:intergenic 50.0%
! TTTTGGCACCTCTACTTCCC+TGG + chr1_1:70010127-70010146 None:intergenic 50.0%
GGACTAGGGAACCAAAACCA+TGG + chr1_1:70010233-70010252 None:intergenic 50.0%
TACTCCATACGCGCACATCA+TGG - chr1_1:70010341-70010360 Msa0040040:intron 50.0%
TATACTGCGGGAATTGGCCA+AGG - chr1_1:70010407-70010426 Msa0040040:CDS 50.0%
AGCCGAACTAACTGTCTGTC+CGG - chr1_1:70010461-70010480 Msa0040040:CDS 50.0%
AGCCGGACAGACAGTTAGTT+CGG + chr1_1:70010466-70010485 None:intergenic 50.0%
CTCCTCATGGCCATAATAGC+CGG + chr1_1:70010483-70010502 None:intergenic 50.0%
CACAGCTCAACTCAAGGACA+AGG + chr1_1:70010756-70010775 None:intergenic 50.0%
CATAGCTCAGCTCAAGGTCA+AGG + chr1_1:70010937-70010956 None:intergenic 50.0%
GGAAGAGTGGCATCTTGTGA+CGG - chr1_1:70011087-70011106 Msa0040040:intron 50.0%
ATGCTGAATGGTTCGTGGGA+TGG + chr1_1:70011185-70011204 None:intergenic 50.0%
CACAGATGCTGAATGGTTCG+TGG + chr1_1:70011190-70011209 None:intergenic 50.0%
AAGGACATTTGCCTGGTCAC+TGG + chr1_1:70011223-70011242 None:intergenic 50.0%
GCACTGGAAATGGTTCTCTC+AGG - chr1_1:70011343-70011362 Msa0040040:CDS 50.0%
TTGGCCCCAAATGGAGAAAC+TGG + chr1_1:70012275-70012294 None:intergenic 50.0%
! TGCAGTGCATGTGCTTGCTA+AGG - chr1_1:70012613-70012632 Msa0040040:five_prime_UTR 50.0%
CAAAGGAATTCAGGCCCACA+AGG + chr1_1:70012845-70012864 None:intergenic 50.0%
TAACACACGGAGTGGGGATA+CGG + chr1_1:70013180-70013199 None:intergenic 50.0%
TGCCTCCAGAGAAGCAAGTC+TGG + chr1_1:70007164-70007183 None:intergenic 55.0%
TTGCAAAGCAGGGAGCTCTC+AGG - chr1_1:70007654-70007673 Msa0040040:intron 55.0%
CAGGGAGCTCTCAGGCAAAT+GGG - chr1_1:70007662-70007681 Msa0040040:intron 55.0%
AGCCTGATCCTGTCCAGAGT+TGG - chr1_1:70008561-70008580 Msa0040040:CDS 55.0%
CTCCAACTCTGGACAGGATC+AGG + chr1_1:70008566-70008585 None:intergenic 55.0%
GGATCTGTCACCCCTTTCCT+TGG - chr1_1:70008860-70008879 Msa0040040:CDS 55.0%
TGCTGTCGGCAGAAACTCGA+AGG - chr1_1:70009418-70009437 Msa0040040:intron 55.0%
GTGAATCCCTGGGCAATTGC+AGG + chr1_1:70010044-70010063 None:intergenic 55.0%
CCTCTACTTCCCTGGGATTG+TGG + chr1_1:70010119-70010138 None:intergenic 55.0%
CCACAATCCCAGGGAAGTAG+AGG - chr1_1:70010116-70010135 Msa0040040:intron 55.0%
AAATGCAGGCCCATCCCAGA+TGG + chr1_1:70010261-70010280 None:intergenic 55.0%
TGGGATGGGCCTGCATTTCT+TGG - chr1_1:70010263-70010282 Msa0040040:intron 55.0%
ATGGGCCTGCATTTCTTGGC+CGG - chr1_1:70010267-70010286 Msa0040040:intron 55.0%
TGCTCCATGATGTGCGCGTA+TGG + chr1_1:70010348-70010367 None:intergenic 55.0%
TCATGGAGCAGTGAGGTCTC+TGG - chr1_1:70010358-70010377 Msa0040040:intron 55.0%
GAGGTCTCTGGCTGTTCATC+AGG - chr1_1:70010370-70010389 Msa0040040:CDS 55.0%
GTCCGGCTATTATGGCCATG+AGG - chr1_1:70010478-70010497 Msa0040040:CDS 55.0%
CGGCTATTATGGCCATGAGG+AGG - chr1_1:70010481-70010500 Msa0040040:CDS 55.0%
GCTGAGTCCGAAACGGAATC+TGG - chr1_1:70011159-70011178 Msa0040040:intron 55.0%
GGGATGGCCAGATTCCGTTT+CGG + chr1_1:70011169-70011188 None:intergenic 55.0%
GCTTCTTGGCGTGCTCATGA+TGG - chr1_1:70011672-70011691 Msa0040040:CDS 55.0%
GTGCATCAAGCAGACTGCAG+AGG + chr1_1:70012083-70012102 None:intergenic 55.0%
AACACACGGAGTGGGGATAC+GGG + chr1_1:70013179-70013198 None:intergenic 55.0%
TCAGGGCTCTCTGCCCAAGA+AGG + chr1_1:70006580-70006599 None:intergenic 60.0%
TTCTTGGGCAGAGAGCCCTG+AGG - chr1_1:70006579-70006598 Msa0040040:intron 60.0%
TGGCAGTGGCGTGGCGAATA+GGG + chr1_1:70006798-70006817 None:intergenic 60.0%
! TCTCTGGGAGATCCAACCGC+AGG - chr1_1:70007014-70007033 Msa0040040:intron 60.0%
! CTCTGGGAGATCCAACCGCA+GGG - chr1_1:70007015-70007034 Msa0040040:intron 60.0%
GCAGGGAGCTCTCAGGCAAA+TGG - chr1_1:70007661-70007680 Msa0040040:intron 60.0%
CTGGGAGAAACCGCTCTCCT+TGG - chr1_1:70009533-70009552 Msa0040040:intron 60.0%
TCCCTAGTCCAGCCACCATC+TGG - chr1_1:70010243-70010262 Msa0040040:CDS 60.0%
! CCCAGATGGTGGCTGGACTA+GGG + chr1_1:70010247-70010266 None:intergenic 60.0%
CCCTAGTCCAGCCACCATCT+GGG - chr1_1:70010244-70010263 Msa0040040:CDS 60.0%
! TCCCAGATGGTGGCTGGACT+AGG + chr1_1:70010248-70010267 None:intergenic 60.0%
AGTCCAGCCACCATCTGGGA+TGG - chr1_1:70010248-70010267 Msa0040040:CDS 60.0%
! GTCCAGCCACCATCTGGGAT+GGG - chr1_1:70010249-70010268 Msa0040040:CDS 60.0%
TGGGCCTGCATTTCTTGGCC+GGG - chr1_1:70010268-70010287 Msa0040040:intron 60.0%
CCTGCATTTCTTGGCCGGGT+GGG - chr1_1:70010272-70010291 Msa0040040:intron 60.0%
GCGCACATCATGGAGCAGTG+AGG - chr1_1:70010351-70010370 Msa0040040:intron 60.0%
CTGCGCCTTGCTAGAACCAG+AGG + chr1_1:70011559-70011578 None:intergenic 60.0%
!! CTCTGGTTCTAGCAAGGCGC+AGG - chr1_1:70011557-70011576 Msa0040040:intron 60.0%
ACACACGGAGTGGGGATACG+GGG + chr1_1:70013178-70013197 None:intergenic 60.0%
GTGGCGTGGCGAATAGGGTG+TGG + chr1_1:70006793-70006812 None:intergenic 65.0%
CTGGCAGTGGCGTGGCGAAT+AGG + chr1_1:70006799-70006818 None:intergenic 65.0%
TGCAGGCCCATCCCAGATGG+TGG + chr1_1:70010258-70010277 None:intergenic 65.0%
GCCTGCATTTCTTGGCCGGG+TGG - chr1_1:70010271-70010290 Msa0040040:intron 65.0%
CCCACCCGGCCAAGAAATGC+AGG + chr1_1:70010275-70010294 None:intergenic 65.0%
! GGTTCTAGCAAGGCGCAGGC+AGG - chr1_1:70011561-70011580 Msa0040040:intron 65.0%
TCTAGCAAGGCGCAGGCAGG+TGG - chr1_1:70011564-70011583 Msa0040040:intron 65.0%
! GGCCCATCCCAGATGGTGGC+TGG + chr1_1:70010254-70010273 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 70005698 70013338 70005698 ID=Msa0040040;Name=Msa0040040
chr1_1 mRNA 70005698 70013338 70005698 ID=Msa0040040-mRNA-1;Parent=Msa0040040;Name=Msa0040040-mRNA-1;_AED=0.08;_eAED=0.08;_QI=1175|0.92|0.92|1|1|1|14|245|1043
chr1_1 exon 70005698 70006095 70005698 ID=Msa0040040-mRNA-1:exon:23046;Parent=Msa0040040-mRNA-1
chr1_1 exon 70006676 70006814 70006676 ID=Msa0040040-mRNA-1:exon:23045;Parent=Msa0040040-mRNA-1
chr1_1 exon 70007175 70007248 70007175 ID=Msa0040040-mRNA-1:exon:23044;Parent=Msa0040040-mRNA-1
chr1_1 exon 70007329 70007572 70007329 ID=Msa0040040-mRNA-1:exon:23043;Parent=Msa0040040-mRNA-1
chr1_1 exon 70007672 70007982 70007672 ID=Msa0040040-mRNA-1:exon:23042;Parent=Msa0040040-mRNA-1
chr1_1 exon 70008534 70009052 70008534 ID=Msa0040040-mRNA-1:exon:23041;Parent=Msa0040040-mRNA-1
chr1_1 exon 70009188 70009299 70009188 ID=Msa0040040-mRNA-1:exon:23040;Parent=Msa0040040-mRNA-1
chr1_1 exon 70009541 70009749 70009541 ID=Msa0040040-mRNA-1:exon:23039;Parent=Msa0040040-mRNA-1
chr1_1 exon 70010206 70010268 70010206 ID=Msa0040040-mRNA-1:exon:23038;Parent=Msa0040040-mRNA-1
chr1_1 exon 70010363 70010568 70010363 ID=Msa0040040-mRNA-1:exon:23037;Parent=Msa0040040-mRNA-1
chr1_1 exon 70010662 70010734 70010662 ID=Msa0040040-mRNA-1:exon:23036;Parent=Msa0040040-mRNA-1
chr1_1 exon 70010849 70011064 70010849 ID=Msa0040040-mRNA-1:exon:23035;Parent=Msa0040040-mRNA-1
chr1_1 exon 70011225 70011510 70011225 ID=Msa0040040-mRNA-1:exon:23034;Parent=Msa0040040-mRNA-1
chr1_1 exon 70011637 70013338 70011637 ID=Msa0040040-mRNA-1:exon:23033;Parent=Msa0040040-mRNA-1
chr1_1 five_prime_UTR 70012164 70013338 70012164 ID=Msa0040040-mRNA-1:five_prime_utr;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70011637 70012163 70011637 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70011225 70011510 70011225 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70010849 70011064 70010849 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70010662 70010734 70010662 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70010363 70010568 70010363 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70010206 70010268 70010206 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70009541 70009749 70009541 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70009188 70009299 70009188 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70008534 70009052 70008534 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70007672 70007982 70007672 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70007329 70007572 70007329 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70007175 70007248 70007175 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70006676 70006814 70006676 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 CDS 70005943 70006095 70005943 ID=Msa0040040-mRNA-1:cds;Parent=Msa0040040-mRNA-1
chr1_1 three_prime_UTR 70005698 70005942 70005698 ID=Msa0040040-mRNA-1:three_prime_utr;Parent=Msa0040040-mRNA-1
Gene Sequence

>Msa0040040

ATGCAGCGAGAGACATCTCTTCTATCTGAAACTGCGTATCTACAAGAATTGGAACAAGCATCTGCATTTTCGGAACATGCTAGGCATTTGAATGCTTGTTACCATTACCCATTAAGTCAAATGAAAAGGAAGAACATCTCATCTCTGGGAGATCCAACCGCAGGGACATTCACTAAAAATATAAGTGATGTATCTTTCATTGACAAAAATTATCGGTTGCCAAATAAAATGAACCATATATCTTTTCTTCAACATATGAAAGAGGAAGATGAAGGCTTTTCAGGATATCCAGACTTGCTTCTCTGGAGGCAGAAATTGTGTTCTTCAAGACTTGCCTCTGAAGATATTGCAAGGGACATATTTTCTGTCGGTTGTCTCTTGGCAGAACTTCATCTTTGCAGACCACTATTTGATTCAATCTCATTGGAAATATACTTGGAGGATGGAACATTACCAGGATTTCTGCAGGAACTACCTCCTCATGTTAGAATACTTGTCGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCGGCCAAAATTCTTCTGGATTCACCTTATTTTCCGAAAACAATCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTTGCTAAAGATGAATCTCGTCTTCATTTTGCTGCAAATCTTGCAAAGCAGGGAGCTCTCAGGCAAATGGGTACATTTGCAACTGAAATGTGTGCTGCTTACTGCTTACCACTTATAGTGAATGTTGCGAGTGATACTGAAGCTGAATGGGCATACATACTACTAAAGGAATTGATGAAATGCTTAACAGCACAAACAAACACAGGTTATTTACATTTGAAGGTTTCCCTTTTACAAGATTCATTTGTACGCGAAATATGGAACCGAGTTGGTAAACAGGCATACCTGGAAACTATTCACCCATTGGTCTTATCAAACTTGTATATTTCTCCGGATAAAAATTCAGCTGCATCTGCTTCGGTGCTACTAATTGGTTCCAGTGAGGAGATTGGTGTACCAATTACCATAAATCAGACTATTTTGCCCCTTGTTCACTGCTTTGGGAAAGGACTATGTGTAGATGGCATTGATGTGCTGGTCAGAATTGGGGGTATTTTTGGGGAATCCTTTATTGTTAAACAGATGCTACCATTACTGAAAAATGTCGTCCGATCATTCATTGATGTGTCATTCGTGAATAAGCCTGATCCTGTCCAGAGTTGGAGTTCTTTAGCACTTATTGATTGTATGATGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAAGTTATTGTAAAGGAGCTGCTTGAAGACATAAGTTGCATACACGTTGGGGTTCTTATGCAGAAACATATGGAAATTACTGTGCTTCAGGTTGCTGCTAATACTCTCTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACTGCATTGCATATTCTTCCAAAACTTAAAGAACTGTTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCGACTGCTGTCGGCAGAAACTCGAAGGTTACCAAATTAAAAATTGGAGGGGACTTCCAAATTGAGAGTCGCATGGATCTAGTGTTGCTTCTCTATACCTTGTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAACAACTTCTACGCCGTCATAACTGGAAGTGGGAATATGCAGGAGAATCATCAAGAAATAGCTCAGAAAGTAACATTGCTAGAAGACCTGCAATTGCCCAGGGATTCACATCTGAATACAATCCAGCAAAGTTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAGGGAAGTAGAGGTGCCAAAAATTTGATTCAGAGAAGACCATTTAAAGCTCACCAAAGCCCAGTAGTAATGCAAGAAGGAATGTCAAACCAAGTGAACCATGAACCATGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGCATTTCTTGGCCGGGTGGGAATCCAAAAAGATGATCTTCCATGGAAAATCAGAGCATCTGTAATCTACTCCATACGCGCACATCATGGAGCAGTGAGGTCTCTGGCTGTTCATCAGGATGAATCTACCGTTTATACTGCGGGAATTGGCCAAGGATATAAAGGAACTGTTATGAAGTGGGAATTGAGCCGAACTAACTGTCTGTCCGGCTATTATGGCCATGAGGAGGTTGTAAACGATATTTGTATTTTATCATCTAGTGGAAGAGTGGCATCTTGTGACGGAACAATTCATATTTGGGATAGTCAAACAGGGAAGCAAATATCAGTATTTGCTGAGTCCGAAACGGAATCTGGCCATCCCACGAACCATTCAGCATCTGTGCCAAAAATTACCAGTGACCAGGCAAATGTCCTTAATTTGAATACTCTGTCAAATGGGATGCTGTCTAGTGCTTTTGATTCAAGCCTTTATACTTGTATGCATCTGTTAGACTCTGCTGAAACTCTTGTAGTTGGCACTGGAAATGGTTCTCTCAGGTTCATTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGGGGGGAATCTAATGAATCTAGTTTTCATTCACTTATTTCTGCTGTATGTTCCTCTGGTTCTAGCAAGGCGCAGGCAGGTGGAATTTCCACCTCACCATCTTTAATTGCAACTGCACAAAGTTCTGGTCACTGTAAATTGTTTGATGCAAAGAGTGGAAATGTCGTTGCTTCTTGGCGTGCTCATGATGGATATGTAACAAAGTTGGCATCACCTGAGGAACATCTGCTTATTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTGAGAATGAATTCACCATCACAGCCCATTATTTTCAGAGGTCATTCAGATGGAATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGGCTTCTTTCCCTGTCTAAATCTGCCATTGAAACGGATGGGCAGCATCACATTATCCCCCAGAAACTCTATGTTTCTTCTGATAATGGAATGAGAAGCTTGTCAGCATTATCAAGTATCAGTATACTTCCTTTCTCTCGATTGTTTCTTATTGGAACAGAAGATGGTTATTTGAGAATTTGTTGTTAA
Protein sequence

>Msa0040040

MQRETSLLSETAYLQELEQASAFSEHARHLNACYHYPLSQMKRKNISSLGDPTAGTFTKNISDVSFIDKNYRLPNKMNHISFLQHMKEEDEGFSGYPDLLLWRQKLCSSRLASEDIARDIFSVGCLLAELHLCRPLFDSISLEIYLEDGTLPGFLQELPPHVRILVEACIQKDWMRRPSAKILLDSPYFPKTIKSSYLFLAPLQLVAKDESRLHFAANLAKQGALRQMGTFATEMCAAYCLPLIVNVASDTEAEWAYILLKELMKCLTAQTNTGYLHLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKNSAASASVLLIGSSEEIGVPITINQTILPLVHCFGKGLCVDGIDVLVRIGGIFGESFIVKQMLPLLKNVVRSFIDVSFVNKPDPVQSWSSLALIDCMMTLDGLVAFLTEEVIVKELLEDISCIHVGVLMQKHMEITVLQVAANTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTAVGRNSKVTKLKIGGDFQIESRMDLVLLLYTLFASLLGIEKLRQCCATWLLLEQQLLRRHNWKWEYAGESSRNSSESNIARRPAIAQGFTSEYNPAKLLLNGVGWSIPQSQGSRGAKNLIQRRPFKAHQSPVVMQEGMSNQVNHEPWFWFPSPATIWDGPAFLGRVGIQKDDLPWKIRASVIYSIRAHHGAVRSLAVHQDESTVYTAGIGQGYKGTVMKWELSRTNCLSGYYGHEEVVNDICILSSSGRVASCDGTIHIWDSQTGKQISVFAESETESGHPTNHSASVPKITSDQANVLNLNTLSNGMLSSAFDSSLYTCMHLLDSAETLVVGTGNGSLRFIDVARGQKLHIWRGESNESSFHSLISAVCSSGSSKAQAGGISTSPSLIATAQSSGHCKLFDAKSGNVVASWRAHDGYVTKLASPEEHLLISSSLDRTLRVWDLRMNSPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSAIETDGQHHIIPQKLYVSSDNGMRSLSALSSISILPFSRLFLIGTEDGYLRICC*