AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0180670


Find 391 sgRNAs with CRISPR-Local

Find 648 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr1_4 gene 68657615 68666295 68657615 ID=Msa0180670;Name=Msa0180670
chr1_4 mRNA 68657615 68666295 68657615 ID=Msa0180670-mRNA-1;Parent=Msa0180670;Name=Msa0180670-mRNA-1;_AED=0.08;_eAED=0.08;_QI=62|0.86|0.87|1|1|1|16|245|1624
chr1_4 exon 68657615 68657805 68657615 ID=Msa0180670-mRNA-1:exon:22663;Parent=Msa0180670-mRNA-1
chr1_4 exon 68657926 68657975 68657926 ID=Msa0180670-mRNA-1:exon:22664;Parent=Msa0180670-mRNA-1
chr1_4 exon 68658267 68660357 68658267 ID=Msa0180670-mRNA-1:exon:22665;Parent=Msa0180670-mRNA-1
chr1_4 exon 68660484 68660769 68660484 ID=Msa0180670-mRNA-1:exon:22666;Parent=Msa0180670-mRNA-1
chr1_4 exon 68660930 68661145 68660930 ID=Msa0180670-mRNA-1:exon:22667;Parent=Msa0180670-mRNA-1
chr1_4 exon 68661260 68661332 68661260 ID=Msa0180670-mRNA-1:exon:22668;Parent=Msa0180670-mRNA-1
chr1_4 exon 68661424 68661629 68661424 ID=Msa0180670-mRNA-1:exon:22669;Parent=Msa0180670-mRNA-1
chr1_4 exon 68661724 68661786 68661724 ID=Msa0180670-mRNA-1:exon:22670;Parent=Msa0180670-mRNA-1
chr1_4 exon 68662246 68662454 68662246 ID=Msa0180670-mRNA-1:exon:22671;Parent=Msa0180670-mRNA-1
chr1_4 exon 68662696 68662807 68662696 ID=Msa0180670-mRNA-1:exon:22672;Parent=Msa0180670-mRNA-1
chr1_4 exon 68662943 68663461 68662943 ID=Msa0180670-mRNA-1:exon:22673;Parent=Msa0180670-mRNA-1
chr1_4 exon 68664013 68664323 68664013 ID=Msa0180670-mRNA-1:exon:22674;Parent=Msa0180670-mRNA-1
chr1_4 exon 68664423 68664666 68664423 ID=Msa0180670-mRNA-1:exon:22675;Parent=Msa0180670-mRNA-1
chr1_4 exon 68664747 68664820 68664747 ID=Msa0180670-mRNA-1:exon:22676;Parent=Msa0180670-mRNA-1
chr1_4 exon 68665181 68665319 68665181 ID=Msa0180670-mRNA-1:exon:22677;Parent=Msa0180670-mRNA-1
chr1_4 exon 68665898 68666295 68665898 ID=Msa0180670-mRNA-1:exon:22678;Parent=Msa0180670-mRNA-1
chr1_4 five_prime_UTR 68657615 68657676 68657615 ID=Msa0180670-mRNA-1:five_prime_utr;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68657677 68657805 68657677 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68657926 68657975 68657926 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68658267 68660357 68658267 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68660484 68660769 68660484 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68660930 68661145 68660930 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68661260 68661332 68661260 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68661424 68661629 68661424 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68661724 68661786 68661724 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68662246 68662454 68662246 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68662696 68662807 68662696 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68662943 68663461 68662943 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68664013 68664323 68664013 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68664423 68664666 68664423 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68664747 68664820 68664747 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68665181 68665319 68665181 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 CDS 68665898 68666050 68665898 ID=Msa0180670-mRNA-1:cds;Parent=Msa0180670-mRNA-1
chr1_4 three_prime_UTR 68666051 68666295 68666051 ID=Msa0180670-mRNA-1:three_prime_utr;Parent=Msa0180670-mRNA-1
Gene Sequence

>Msa0180670

ATGAAGGAAAAGAGCGAATGCTTCGAGTGCCTTCAACTCAGAATCAACTCAGACTTCTCCGATCAAATTGTCTTCAATTATGCAATCTCCGATTCTCCTTTTCCTTTCGGATCCTCTGCTATTCTCCATATTACTAGTTCAGCAGATGGGGAAGCTTCAAATGGTCAATTCATATTGCAAAATGAATATATTTTGGATAGTAATGAAAACACCAAGAGTGATGATCTTGATGTCAGTGATGGTGGAAATGGATTTACCTTATCTGATGAGTCTGAAACTGGAAAACCTTCGTTTAGGAATACAACTTGTAATCATTCTGGAAGGTTTTCTTGCTCGAGGACAATTTCTGCAATTGCACCTATTGCTTGCGTCGGAAAGTCTTCATATTCTATACTTCAACAGGTTGCTAATGATTTCCTGTCCGGGTTAACTGAAGATCATGTGTTAAAATCACTTGATCTCTTCGTTGAAGGGAAAGCATCTGGACGAGACAGTACGAATTTCCTTAGTTTAATTGGGTTTCCGTCATTTGAAGAAAATAATTTTCCCGGCTCTTTGAGGCATCCAAACATAGCTCCTGTACTTGCAATTTTGAAAACATCTGATTACACTAACCTGGTGCTTCCGAAGACTCAATACAACTTAGAAAGTATTCTTCATTTTAACCCCAATGCATTAAAGTCTGATTGGAATAGAAGATTTCTTATATATCAGCTACTGTCTGCCTTATTGTACTTGCATGGTTTAGGGGTTTCCCATGGTAATATATGTCCGTCCAATATCATGTTGACTGACTCGTTATGGTCATGGATTAGATTATGGAATGAACCTGTACTGGAATCTAATTTAGCTTTGCAAGAGAGTGGAAGTGTAAAATCAAAACCTGCAAAAATAGGTTGTAGTAATGATGGTTGTCATTCGAATAATCTTTATGCTGATCTAAAGCTTTCTCCATTAATTGATTGGCATTCTAGCTTTCATCAGTGGTGGAAAGGAGAACTAAGTAATTTTGAGTATTTGCTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTTGTTGATTTTAGCTCAAAACCAGATGATAATTGTGATGTAGGGTGGCGAGACTTAAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAGTTGGATTTCACCTATTCAACGTCTGAAATCCCTCATCATGTATCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGCTATAAAGCAAGAAGGTTGCCTCTTAGTGTTCTTCGAATGGCAGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCTCAATGCAGAGGCTCTATCAATGGACGCCTGATGAATGCATTCCAGAGTTTTATTGTGACCCCCAAATTTTTCGGTCCGTACATGATGGTATGGCTGATTTGGCTATACCTTCTTGGGCAGAGAGCCCTGAGGATTTCATTAAATTGCATCGTGATGCATTGGAAAGTAATAGGGTGTCATTTCAACTACATCACTGGATAGATATAATCTTTGGCTACAAAATGTCTGGCCAGGCCGCAATTGTTGCTAAGAACGTTATGCTTACTCAATCGGAATCCACAATGCCAAGATCAACAGGACGTCGTCAGCTCTTTATGCGGCCACACCCTATTCGCCACGCCACTGCCAGAATAACACGTAATGGGTCAAACAAATATGCCAAAGTTTTGACCCAAACAAATGAAATGCAGCGAGAGACATCTCTTCTATCTGAAACTGCGTATCTACAAGAATTGGAACAAGCATCTGCATTTTCGGAACATGCTAGGCATTTGAATGCTTGTTACCATTACCCATTAAGTCAAATGAAAAGGAAGAACATCTCATCTCTGGGAGATCCAACCGCAGGGACATTCACTAAAAATATAAGTGATGTATCTTTCATTGACAAAAATTATCGGTTGCCAAATAAAATGAACCATATATCTTTTCTTCAACATATGAAAGAGGAAGATGAAGGCTTTTCAGGATATCCAGACTTGCTTCTCTGGAGGCAGAAATTGTGTTCTTCAAGACTTGCCTCTGAAGATATTGCAAGGGACATATTTTCTGTCGGTTGTCTCTTGGCAGAACTTCATCTTTGCAGACCACTATTTGATTCAATCTCATTGGAAATATACTTGGAGGATGGAACATTACCAGGATTTCTGCAGGAACTACCTCCTCATGTTAGAATACTTGTCGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCGGCCAAAATTCTTCTGGATTCACCTTATTTTCCGAAAACAATCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTTGCTAAAGATGAATCTCGTCTTCATTTTGCTGCAAATCTTGCAAAGCAGGGAGCTCTCAGGCAAATGGGTACATTTGCAACTGAAATGTGTGCTGCTTACTGCTTACCACTTATAGTGAATGTTGCGAGTGATACTGAAGCTGAATGGGCATACATACTACTAAAGGAATTGATGAAATGCTTAACAGCACAAACAAACACAGGTTATTTACATTTGAAGGTTTCCCTTTTACAAGATTCATTTGTACGCGAAATATGGAACCGAGTTGGTAAACAGGCATACCTGGAAACTATTCACCCATTGGTCTTATCAAACTTGTATATTTCTCCGGATAAAAATTCAGCTGCATCTGCTTCGGTGCTACTAATTGGTTCCAGTGAGGAGATTGGTGTACCAATTACCATAAATCAGACTATTTTGCCCCTTGTTCACTGCTTTGGGAAAGGACTATGTGTAGATGGCATTGATGTGCTGGTCAGAATTGGGGGTATTTTTGGGGAATCCTTTATTGTTAAACAGATGCTACCATTACTGAAAAATGTTGTCCGATCATTCATTGATGTGTCATTCGTGAATAAGCCTGATCCTGTCCAGAGTTGGAGTTCTTTAGCACTTATTGATTGTATGATGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAAGTTATTGTAGAGGAGCTGCTTGAAGACATAAGTTGCATACACGTTGGGGTTCTTATGCAGAAACATATGGAAATTACTGTGCTTCAGGTTGCTGCTAATACTCTCTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACTGCATTGCATATTCTTCCAAAACTTAAAGAACTGTTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCGACTGCTGTCGGCAGAAACTCGAAGGTTACCAAATTAAAAATTGGAGGGGACTTCCAAATTGAGAGTCGCATGGATCTAGTGTTGCTTCTCTATACCTTGTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAACAACTTCTACGCCGTCATAACTGGAAGTGGGAATATGCAGGAGAATCATCAAGAAATAGCTCAGAAAGTAACATTGCTAGAAGACCTGCAATTGCCCAGGGATTCACATCTGAATACAATCCAGCAAAGTTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAGGGAAGTAGAGGTGCCAAAAATTTGATTCAGAGAAGACCATTTAAAGCTCACCAAAGCCCAGTAGTAATGCAAGAAGGAATGTCAAACCAAGTGAACCATGAACCATGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGCATTTCTTGGCCGGGTGGGAATCCAAAAAGATGATCTTCCATGGAAAATCAGAGCATCTGTAATCTACTCCATACGCGCACATCATGGAGCAGTGAGGTCTCTGGCTGTTCATCAGGATGAATCTACCGTTTATACTGCGGGAATTGGCCAAGGATATAAAGGAACTGTTATGAAGTGGGAATTGAGCCGAACTAACTGTCTGTCCGGCTATTATGGCCATGAGGAGGTTGTAAACGATATTTGTATTTTATCATCTAGTGGAAGAGTGGCATCTTGTGACGGAACAATTCATATTTGGGATAGTCAAACAGGGAAGCAAATATCAATATTTGCTGAGTCCGAAACGGAATCTGGCCATCCCACGAACCATTCAGCATCTGTGCCAAAAATTACCAGTGACCAGGCAAATGTCCTTAATTTGAATACTCTGTCAAATGGGATGCTGTCTAGTGCTTTTGATTCAAGCCTTTATACTTGTATGCATCTGTTAGACTCTGCTGAAACTCTTGTAGTTGGCACTGGAAATGGTTCTCTCAGGTTCATTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGGGGGGAATCTAATGAATCTAGTTTTCATTCACTTATTTCTGCTGTATGTTCCTCTGGTTCTAGCAAGGCGCAGGCAGGTGGAATTTCCACCTCACCATCTTTAATTGCAACTGCACAAAGTTCTGGTCACTGTAAATTGTTTGATGCAAAGAGTGGAAATGTCGTTGCTTCTTGGCGTGCTCATGATGGATATGTAACAAAGTTGGCATCACCTGAGGAACATCTGCTTATTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTGAGAATGAATTCACCATCACAGCCCATTATTTTCAGAGGTCATTCAGATGGAATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGGCTTCTTTCCCTGTCTAAATCTGCCATTGAAACGGATGGGCAGCATCACATTATCCCCCAGAAACTCTATGTTTCTTCTGATAATGGAATGAGAAGCTTGTCAGCATTATCAAGTATCAGTATACTTCCTTTCTCTCGATTGTTTCTTATTGGAACAGAAGATGGTTATTTGAGAATTTGTTGTTAA

Protein sequence

>Msa0180670

MKEKSECFECLQLRINSDFSDQIVFNYAISDSPFPFGSSAILHITSSADGEASNGQFILQNEYILDSNENTKSDDLDVSDGGNGFTLSDESETGKPSFRNTTCNHSGRFSCSRTISAIAPIACVGKSSYSILQQVANDFLSGLTEDHVLKSLDLFVEGKASGRDSTNFLSLIGFPSFEENNFPGSLRHPNIAPVLAILKTSDYTNLVLPKTQYNLESILHFNPNALKSDWNRRFLIYQLLSALLYLHGLGVSHGNICPSNIMLTDSLWSWIRLWNEPVLESNLALQESGSVKSKPAKIGCSNDGCHSNNLYADLKLSPLIDWHSSFHQWWKGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVVDFSSKPDDNCDVGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSSMQRLYQWTPDECIPEFYCDPQIFRSVHDGMADLAIPSWAESPEDFIKLHRDALESNRVSFQLHHWIDIIFGYKMSGQAAIVAKNVMLTQSESTMPRSTGRRQLFMRPHPIRHATARITRNGSNKYAKVLTQTNEMQRETSLLSETAYLQELEQASAFSEHARHLNACYHYPLSQMKRKNISSLGDPTAGTFTKNISDVSFIDKNYRLPNKMNHISFLQHMKEEDEGFSGYPDLLLWRQKLCSSRLASEDIARDIFSVGCLLAELHLCRPLFDSISLEIYLEDGTLPGFLQELPPHVRILVEACIQKDWMRRPSAKILLDSPYFPKTIKSSYLFLAPLQLVAKDESRLHFAANLAKQGALRQMGTFATEMCAAYCLPLIVNVASDTEAEWAYILLKELMKCLTAQTNTGYLHLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKNSAASASVLLIGSSEEIGVPITINQTILPLVHCFGKGLCVDGIDVLVRIGGIFGESFIVKQMLPLLKNVVRSFIDVSFVNKPDPVQSWSSLALIDCMMTLDGLVAFLTEEVIVEELLEDISCIHVGVLMQKHMEITVLQVAANTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTAVGRNSKVTKLKIGGDFQIESRMDLVLLLYTLFASLLGIEKLRQCCATWLLLEQQLLRRHNWKWEYAGESSRNSSESNIARRPAIAQGFTSEYNPAKLLLNGVGWSIPQSQGSRGAKNLIQRRPFKAHQSPVVMQEGMSNQVNHEPWFWFPSPATIWDGPAFLGRVGIQKDDLPWKIRASVIYSIRAHHGAVRSLAVHQDESTVYTAGIGQGYKGTVMKWELSRTNCLSGYYGHEEVVNDICILSSSGRVASCDGTIHIWDSQTGKQISIFAESETESGHPTNHSASVPKITSDQANVLNLNTLSNGMLSSAFDSSLYTCMHLLDSAETLVVGTGNGSLRFIDVARGQKLHIWRGESNESSFHSLISAVCSSGSSKAQAGGISTSPSLIATAQSSGHCKLFDAKSGNVVASWRAHDGYVTKLASPEEHLLISSSLDRTLRVWDLRMNSPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSAIETDGQHHIIPQKLYVSSDNGMRSLSALSSISILPFSRLFLIGTEDGYLRICC*