AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044290 MtrunA17_Chr1g0210911 90.517 348 10 7 1 339 1 334 0.0 605
Msa0044290 MtrunA17_Chr1g0162931 47.478 337 118 15 3 336 2 282 1.19e-76 236
Msa0044290 MtrunA17_Chr2g0320231 60.870 92 33 2 8 99 81 169 1.44e-31 122
Msa0044290 MtrunA17_Chr2g0288601 69.118 68 21 0 8 75 55 122 6.68e-29 108
Msa0044290 MtrunA17_Chr7g0243081 64.557 79 28 0 2 80 49 127 2.36e-28 112
Msa0044290 MtrunA17_Chr8g0379121 69.697 66 20 0 15 80 102 167 4.19e-28 113
Msa0044290 MtrunA17_Chr2g0283951 60.227 88 29 3 4 85 68 155 1.04e-25 105
Msa0044290 MtrunA17_Chr3g0095611 57.971 69 29 0 14 82 9 77 6.16e-24 97.8
Msa0044290 MtrunA17_Chr5g0410741 47.170 106 49 3 23 127 218 317 4.51e-22 95.9
Msa0044290 MtrunA17_Chr6g0479431 63.793 58 21 0 23 80 201 258 2.77e-21 93.6
Msa0044290 MtrunA17_Chr8g0366281 65.517 58 20 0 23 80 172 229 3.08e-21 93.2
Msa0044290 MtrunA17_Chr1g0154261 59.091 66 25 1 15 80 119 182 9.15e-21 90.9
Msa0044290 MtrunA17_Chr3g0109981 63.793 58 21 0 23 80 273 330 3.46e-20 91.3
Msa0044290 MtrunA17_Chr1g0190301 67.857 56 18 0 25 80 176 231 7.50e-20 89.7
Msa0044290 MtrunA17_Chr7g0261911 66.071 56 19 0 25 80 263 318 1.97e-19 89.0
Msa0044290 MtrunA17_Chr7g0274471 66.071 56 19 0 25 80 219 274 4.41e-19 87.8
Msa0044290 MtrunA17_Chr5g0409731 48.421 95 43 2 1 94 1 90 3.83e-18 83.6
Msa0044290 MtrunA17_Chr6g0461641 55.882 68 30 0 25 92 43 110 4.16e-17 81.6
Msa0044290 MtrunA17_Chr5g0417521 47.778 90 37 3 25 109 16 100 4.45e-17 81.3
Msa0044290 MtrunA17_Chr1g0197171 36.170 141 72 3 25 162 45 170 2.03e-16 78.6
Msa0044290 MtrunA17_Chr2g0321461 62.264 53 20 0 25 77 46 98 6.64e-16 78.2
Msa0044290 MtrunA17_Chr8g0356501 56.452 62 22 1 25 86 38 94 2.28e-15 76.3
Msa0044290 MtrunA17_Chr7g0258551 54.098 61 28 0 20 80 208 268 2.47e-15 76.3
Msa0044290 MtrunA17_Chr2g0290991 56.452 62 22 1 25 86 40 96 4.77e-15 74.7
Msa0044290 MtrunA17_Chr2g0310011 56.452 62 22 1 25 86 36 92 5.19e-15 75.1
Msa0044290 MtrunA17_Chr4g0042451 55.932 59 26 0 25 83 18 76 7.93e-15 74.3
Msa0044290 MtrunA17_Chr2g0291021 65.385 52 18 0 26 77 51 102 8.22e-15 74.3
Msa0044290 MtrunA17_Chr7g0254981 65.385 52 18 0 26 77 52 103 8.30e-15 73.6
Msa0044290 MtrunA17_Chr1g0175091 63.462 52 19 0 26 77 260 311 9.11e-15 74.7
Msa0044290 MtrunA17_Chr1g0175071 35.484 124 66 2 2 123 155 266 1.18e-14 73.6
Msa0044290 MtrunA17_Chr1g0175081 55.769 52 23 0 26 77 24 75 9.41e-13 63.9
Msa0044290 MtrunA17_Chr4g0045361 61.224 49 19 0 29 77 279 327 1.51e-12 68.2
Msa0044290 MtrunA17_Chr4g0009901 43.662 71 39 1 7 77 151 220 4.57e-12 65.5
Msa0044290 MtrunA17_Chr4g0062921 59.184 49 20 0 29 77 240 288 5.76e-12 66.2
Msa0044290 MtrunA17_Chr5g0402631 59.184 49 20 0 29 77 219 267 2.68e-11 63.9
Msa0044290 MtrunA17_Chr4g0031961 50.794 63 30 1 15 77 122 183 3.95e-11 63.2
Msa0044290 MtrunA17_Chr5g0422621 55.102 49 22 0 29 77 203 251 9.08e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044290 AT1G14600.1 72.152 79 22 0 5 83 4 82 5.21e-34 126
Msa0044290 AT2G02060.2 69.512 82 20 1 1 77 1 82 1.84e-33 124
Msa0044290 AT2G02060.1 69.512 82 20 1 1 77 1 82 1.84e-33 124
Msa0044290 AT4G04605.1 67.606 71 23 0 16 86 6 76 8.64e-29 111
Msa0044290 AT2G40260.1 65.789 76 26 0 12 87 70 145 4.28e-28 113
Msa0044290 AT2G42660.1 55.319 94 39 1 16 106 42 135 3.68e-27 107
Msa0044290 AT2G38300.1 54.737 95 41 1 1 95 31 123 3.37e-26 107
Msa0044290 AT4G04555.1 54.054 74 34 0 13 86 3 76 4.01e-22 90.1
Msa0044290 AT5G42630.2 43.363 113 58 3 6 113 86 197 2.08e-21 91.7
Msa0044290 AT5G42630.1 43.363 113 58 3 6 113 86 197 2.62e-21 92.4
Msa0044290 AT4G17695.1 62.712 59 22 0 23 81 163 221 4.38e-21 92.4
Msa0044290 AT1G32240.2 34.756 164 84 5 23 176 212 362 5.54e-21 92.8
Msa0044290 AT1G32240.1 63.793 58 21 0 23 80 212 269 1.83e-20 91.7
Msa0044290 AT5G16560.1 63.793 58 21 0 23 80 218 275 4.45e-20 90.9
Msa0044290 AT4G04580.1 56.716 67 29 0 16 82 6 72 3.03e-19 84.0
Msa0044290 AT4G28610.1 63.636 55 20 0 26 80 227 281 4.95e-18 84.7
Msa0044290 AT5G45580.1 53.333 75 35 0 21 95 4 78 1.16e-17 82.0
Msa0044290 AT5G45580.2 53.333 75 35 0 21 95 20 94 1.53e-17 82.0
Msa0044290 AT3G24120.1 42.017 119 56 4 25 141 42 149 1.70e-17 82.0
Msa0044290 AT3G24120.2 42.017 119 56 4 25 141 42 149 1.80e-17 82.0
Msa0044290 AT3G04450.3 63.636 55 20 0 26 80 240 294 2.26e-17 82.0
Msa0044290 AT3G04450.4 63.636 55 20 0 26 80 200 254 2.73e-17 82.8
Msa0044290 AT3G04450.2 63.636 55 20 0 26 80 200 254 2.73e-17 82.8
Msa0044290 AT3G04450.1 63.636 55 20 0 26 80 240 294 3.14e-17 82.8
Msa0044290 AT5G29000.1 63.636 55 20 0 26 80 190 244 3.96e-17 82.0
Msa0044290 AT5G29000.3 63.636 55 20 0 26 80 190 244 3.96e-17 82.0
Msa0044290 AT5G29000.4 63.636 55 20 0 26 80 233 287 5.27e-17 80.9
Msa0044290 AT5G29000.2 63.636 55 20 0 26 80 233 287 5.32e-17 82.0
Msa0044290 AT2G20400.1 61.818 55 21 0 26 80 233 287 3.11e-16 79.3
Msa0044290 AT2G20400.2 61.818 55 21 0 26 80 233 287 3.18e-16 79.3
Msa0044290 AT2G06020.1 38.182 110 59 3 7 107 66 175 3.21e-16 78.6
Msa0044290 AT4G13640.2 48.276 87 35 2 25 111 38 114 3.40e-16 78.2
Msa0044290 AT4G13640.1 48.276 87 35 2 25 111 38 114 3.58e-16 78.2
Msa0044290 AT3G12730.1 49.351 77 33 2 25 100 24 95 3.64e-16 77.0
Msa0044290 AT5G18240.2 50.725 69 34 0 9 77 30 98 6.24e-16 78.6
Msa0044290 AT5G18240.3 50.725 69 34 0 9 77 30 98 6.24e-16 78.6
Msa0044290 AT5G18240.1 50.725 69 34 0 9 77 30 98 7.39e-16 78.6
Msa0044290 AT5G18240.4 50.725 69 34 0 9 77 30 98 7.39e-16 78.6
Msa0044290 AT5G18240.5 50.725 69 34 0 9 77 30 98 7.46e-16 78.2
Msa0044290 AT3G13040.3 65.385 52 18 0 26 77 243 294 8.52e-16 78.6
Msa0044290 AT3G13040.1 65.385 52 18 0 26 77 243 294 8.52e-16 78.6
Msa0044290 AT3G13040.2 65.385 52 18 0 26 77 243 294 8.52e-16 78.6
Msa0044290 AT3G04030.1 58.491 53 22 0 25 77 46 98 1.32e-15 77.4
Msa0044290 AT3G04030.3 58.491 53 22 0 25 77 46 98 1.62e-15 77.4
Msa0044290 AT1G79430.2 56.452 62 22 1 25 86 35 91 4.01e-15 75.9
Msa0044290 AT2G01060.1 65.385 52 18 0 26 77 17 68 4.58e-15 75.1
Msa0044290 AT1G69580.1 46.341 82 40 2 25 103 35 115 2.21e-14 73.6
Msa0044290 AT1G69580.2 46.341 82 40 2 25 103 35 115 2.29e-14 73.6
Msa0044290 AT1G25550.1 63.265 49 18 0 29 77 214 262 1.04e-13 71.6
Msa0044290 AT5G06800.3 61.538 52 20 0 26 77 194 245 1.45e-13 70.5
Msa0044290 AT5G06800.1 61.538 52 20 0 26 77 194 245 3.55e-13 70.1
Msa0044290 AT5G06800.2 61.538 52 20 0 26 77 194 245 3.84e-13 70.1
Msa0044290 AT3G04030.2 54.717 53 23 1 25 77 46 97 7.62e-13 69.3
Msa0044290 AT1G25550.2 47.826 69 36 0 9 77 194 262 1.22e-12 67.8
Msa0044290 AT2G03500.1 59.184 49 20 0 29 77 238 286 6.08e-12 66.6
Msa0044290 AT5G44190.1 48.571 70 34 2 23 91 146 214 6.57e-12 66.6
Msa0044290 AT5G44190.2 48.571 70 34 2 23 91 146 214 8.02e-12 65.9
Msa0044290 AT4G37180.1 54.237 59 27 0 19 77 205 263 8.80e-12 65.9
Msa0044290 AT5G59570.2 53.571 56 25 1 22 77 139 193 1.05e-11 65.1
Msa0044290 AT5G59570.1 53.571 56 25 1 22 77 139 193 1.05e-11 65.1
Msa0044290 AT4G37180.2 54.237 59 27 0 19 77 212 270 1.09e-11 65.9
Msa0044290 AT1G68670.1 59.184 49 20 0 29 77 220 268 1.97e-11 64.7
Msa0044290 AT1G13300.1 46.479 71 32 1 7 77 170 234 4.42e-11 63.5
Msa0044290 AT5G58080.1 50.000 72 30 2 6 77 181 246 4.50e-11 64.3
Msa0044290 AT3G46640.2 52.727 55 25 1 23 77 143 196 6.51e-11 63.2
Msa0044290 AT3G46640.1 52.727 55 25 1 23 77 143 196 6.51e-11 63.2
Msa0044290 AT3G46640.3 45.333 75 40 1 3 77 123 196 7.52e-11 62.8

Find 93 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACTTTGCTACCAGATTT+TGG 0.184199 1_1:-75787188 Msa0044290:CDS
CCTGAGAGAAATCAGATTCT+TGG 0.196675 1_1:+75787135 None:intergenic
TAAACTTGTTCTTCAGTTGA+TGG 0.274648 1_1:-75788350 Msa0044290:CDS
AGAAGCATGAGAGGTGAATT+AGG 0.294301 1_1:-75788193 Msa0044290:CDS
ATCTGGTAGCAAAGTTGAAT+TGG 0.294548 1_1:+75787193 None:intergenic
AGCCCTTCATGGTCAATTAA+TGG 0.300532 1_1:-75785729 Msa0044290:CDS
GACAAGTAATGCTTCTTATT+CGG 0.316581 1_1:-75785613 Msa0044290:CDS
GGAAGAGAAGGAGGAGGATC+AGG 0.336536 1_1:-75788582 Msa0044290:CDS
TCCCCTCTCTCTCTCCCAGC+TGG 0.351405 1_1:-75788816 Msa0044290:five_prime_UTR
GAATCTGATTCTTCTTTCAT+TGG 0.354755 1_1:-75787629 Msa0044290:CDS
CAAGACATTGGTTTCTATGT+TGG 0.368948 1_1:+75787720 None:intergenic
AGAGCTCTGAAAATTCCTTT+AGG 0.369266 1_1:+75788883 None:intergenic
ACAGTAACAACTTCTCAAAA+AGG 0.375282 1_1:-75787604 Msa0044290:intron
AACAAATATTCCAACCCTCT+TGG 0.376468 1_1:+75788638 None:intergenic
AAGACATTGGTTTCTATGTT+GGG 0.380947 1_1:+75787721 None:intergenic
GCAGAACAAGAAAGGAATAA+AGG 0.382336 1_1:-75787258 Msa0044290:CDS
ACCCATCAGGACCAGGGTTA+GGG 0.390120 1_1:+75785553 None:intergenic
GACCTATCTTTAGCCATTTG+TGG 0.393044 1_1:-75785471 Msa0044290:CDS
AACCCATCAGGACCAGGGTT+AGG 0.394026 1_1:+75785552 None:intergenic
ATCAACTGAAGAACAAGTTT+AGG 0.398456 1_1:+75788352 None:intergenic
ATCAAATCAATTGCCACAAA+TGG 0.410193 1_1:+75785458 None:intergenic
CTTTAGGACATTGGTGTCAC+TGG 0.428624 1_1:+75788899 None:intergenic
ACAAAGCAACGATGAAGTTC+AGG 0.428827 1_1:+75788507 None:intergenic
CTGCAGATCACCCATGGTAT+TGG 0.429020 1_1:+75787286 None:intergenic
ACACGTCAAGAGCCATCTTC+AGG 0.432180 1_1:-75788305 Msa0044290:intron
GAGAGAGGGGAATAAGTGTA+AGG 0.433665 1_1:+75788828 None:intergenic
GTGAGGTTTATGCCAAAATC+TGG 0.438737 1_1:+75787176 None:intergenic
ATGACAGAAAGAGCCCTTCA+TGG 0.449662 1_1:-75785740 Msa0044290:CDS
CTTGTTCCTACTCACTCACT+CGG 0.453311 1_1:-75785345 Msa0044290:three_prime_UTR
TGAAAATTCCTTTAGGACAT+TGG 0.453439 1_1:+75788890 None:intergenic
CCCCTAACCCTGGTCCTGAT+GGG 0.456881 1_1:-75785554 Msa0044290:CDS
AGTAGTAGTTGTGGAAGAGA+AGG 0.462888 1_1:-75788594 Msa0044290:CDS
GTTCATGCTATTCAAACCCT+TGG 0.466593 1_1:-75788486 Msa0044290:CDS
TAGAAAATGAGTAGTAGTTG+TGG 0.467194 1_1:-75788603 Msa0044290:exon
TCTGGTAGCAAAGTTGAATT+GGG 0.475643 1_1:+75787194 None:intergenic
CTGCTAAACCCATCAGGACC+AGG 0.477057 1_1:+75785546 None:intergenic
CATCATGCTCTTCAAGACAT+TGG 0.479410 1_1:+75787708 None:intergenic
TGCCACAAATGGCTAAAGAT+AGG 0.479487 1_1:+75785469 None:intergenic
AGTTGTGGAAGAGAAGGAGG+AGG 0.483366 1_1:-75788588 Msa0044290:CDS
AAGAAAGAGAATAAAGAAAG+AGG 0.485354 1_1:+75785387 None:intergenic
AGTAGTTGTGGAAGAGAAGG+AGG 0.488905 1_1:-75788591 Msa0044290:CDS
CCAAGAATCTGATTTCTCTC+AGG 0.491648 1_1:-75787135 Msa0044290:intron
GCATTACTTGTCTGAGGTGA+AGG 0.495350 1_1:+75785624 None:intergenic
TTCAGTTGATGGATATCAAA+GGG 0.496688 1_1:-75788339 Msa0044290:CDS
CATGCTATTCAAACCCTTGG+AGG 0.504028 1_1:-75788483 Msa0044290:CDS
TTGTAGCTGCTAAACCCATC+AGG 0.505555 1_1:+75785540 None:intergenic
AGAGCACATGTAGAAGTTGA+AGG 0.510912 1_1:-75785690 Msa0044290:CDS
CAGCAGCTGCAGAACAAGAA+AGG 0.510940 1_1:-75787266 Msa0044290:CDS
CAGTGACACCAATGTCCTAA+AGG 0.511162 1_1:-75788898 Msa0044290:five_prime_UTR
AATTGCCTCACTGATTTCAC+TGG 0.511384 1_1:+75785590 None:intergenic
TATGGAAAACAGAATCCAGC+TGG 0.521590 1_1:+75788801 None:intergenic
CATGTAGAAGTTGAAGGAGT+AGG 0.522933 1_1:-75785684 Msa0044290:CDS
AATGAAAATGAACCTGAAGA+TGG 0.525028 1_1:+75788293 None:intergenic
AATCCAGCTGGGAGAGAGAG+AGG 0.530513 1_1:+75788813 None:intergenic
CAAAAGTCCCTCGTTTGAGA+TGG 0.534114 1_1:-75788533 Msa0044290:CDS
ATCACCCATGGTATTGGCAT+TGG 0.534408 1_1:+75787292 None:intergenic
TTAGAGATTTGAAAGAAGTG+AGG 0.544979 1_1:+75787159 None:intergenic
TCCAGCTGGGAGAGAGAGAG+GGG 0.545938 1_1:+75788815 None:intergenic
TATCATCTACTGTGAATGAA+AGG 0.549767 1_1:-75785503 Msa0044290:CDS
CTTCAGTTGATGGATATCAA+AGG 0.552892 1_1:-75788340 Msa0044290:CDS
TGTCTTGAAGAGCATGATGA+TGG 0.559094 1_1:-75787704 Msa0044290:CDS
GTAATATCTGATCCTTCTGA+TGG 0.563151 1_1:+75788921 None:intergenic
ATCCAGCTGGGAGAGAGAGA+GGG 0.567224 1_1:+75788814 None:intergenic
TGATGGGTTTAGCAGCTACA+AGG 0.568771 1_1:-75785538 Msa0044290:CDS
CCCATCAGGACCAGGGTTAG+GGG 0.569771 1_1:+75785554 None:intergenic
GAGAGAAAATGAAAAGACGA+AGG 0.571611 1_1:+75788850 None:intergenic
GTCCATTAATTGACCATGAA+GGG 0.573791 1_1:+75785727 None:intergenic
AGTCCATTAATTGACCATGA+AGG 0.574633 1_1:+75785726 None:intergenic
CAGCTGCTGCAGATCACCCA+TGG 0.582133 1_1:+75787280 None:intergenic
ATGTTGAGTATTCTTTGATG+AGG 0.587210 1_1:-75787655 Msa0044290:CDS
GTAGAAGTTGAAGGAGTAGG+AGG 0.587674 1_1:-75785681 Msa0044290:CDS
TTGTTCCTACTCACTCACTC+GGG 0.592261 1_1:-75785344 Msa0044290:three_prime_UTR
CAATGCCAATGCCAATACCA+TGG 0.597295 1_1:-75787297 Msa0044290:CDS
TATTTATCTATACAAAGAAG+AGG 0.600174 1_1:+75788747 None:intergenic
ATTTATCTATACAAAGAAGA+GGG 0.603807 1_1:+75788748 None:intergenic
CAGATGTATAGAAGCATGAG+AGG 0.614112 1_1:-75788202 Msa0044290:CDS
CTTACTATGATGACCTCCAA+GGG 0.614845 1_1:+75788470 None:intergenic
AGAGAAGGAGGAGGATCAGG+AGG 0.615008 1_1:-75788579 Msa0044290:CDS
CAGGAGTCCATCTCAAACGA+GGG 0.615814 1_1:+75788526 None:intergenic
TGCTAAACCCATCAGGACCA+GGG 0.616115 1_1:+75785547 None:intergenic
ACTTACTATGATGACCTCCA+AGG 0.620124 1_1:+75788469 None:intergenic
TAAGAAGCATTACTTGTCTG+AGG 0.629009 1_1:+75785618 None:intergenic
AATGCCAATGCCAATACCAT+GGG 0.632797 1_1:-75787296 Msa0044290:CDS
CCATCAGGACCAGGGTTAGG+GGG 0.646226 1_1:+75785555 None:intergenic
ACATAGTCATAAAAGCAGTA+CGG 0.651015 1_1:+75787326 None:intergenic
GTACAGCAACTACCATCAGA+AGG 0.658105 1_1:-75788933 None:intergenic
AGAGGTGAATTAGGAAGACA+AGG 0.660553 1_1:-75788184 Msa0044290:intron
ATGGAAAACAGAATCCAGCT+GGG 0.660915 1_1:+75788802 None:intergenic
TCAGGAGTCCATCTCAAACG+AGG 0.669853 1_1:+75788525 None:intergenic
GGTAGCAAAGTTGAATTGGG+TGG 0.692739 1_1:+75787197 None:intergenic
ATGCACCCGAGTGAGTGAGT+AGG 0.710279 1_1:+75785339 None:intergenic
GAGGATCAGGAGGAGCAGTG+AGG 0.714959 1_1:-75788569 Msa0044290:CDS
TTCGGCCAGTGAAATCAGTG+AGG 0.751752 1_1:-75785595 Msa0044290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGAAAATATTGTATAAA+AGG + chr1_1:75786483-75786502 None:intergenic 10.0%
!! AACATTAAAAAAAAAGTTAT+TGG - chr1_1:75786724-75786743 Msa0044290:intron 10.0%
!!! ATATTGTATAAAAGGTATAA+TGG + chr1_1:75786475-75786494 None:intergenic 15.0%
!! AAAAAAAAGTTATTGGTATT+TGG - chr1_1:75786731-75786750 Msa0044290:intron 15.0%
!! CAAAAAATAAGTTAAAGTAA+TGG + chr1_1:75786781-75786800 None:intergenic 15.0%
!!! AATATTTAAACCTTTCATTT+TGG - chr1_1:75787509-75787528 Msa0044290:intron 15.0%
!!! ATATTTAAACCTTTCATTTT+GGG - chr1_1:75787510-75787529 Msa0044290:intron 15.0%
!!! ATAATGGATAATATTTTTAC+TGG - chr1_1:75788376-75788395 Msa0044290:intron 15.0%
!! ATTTATCTATACAAAGAAGA+GGG + chr1_1:75785507-75785526 None:intergenic 20.0%
!! TATTTATCTATACAAAGAAG+AGG + chr1_1:75785508-75785527 None:intergenic 20.0%
!!! TCTATTATTTTTTCTTCTCT+TGG - chr1_1:75786201-75786220 Msa0044290:intron 20.0%
!!! TTTTTTGAAATAAGTCCTTA+TGG - chr1_1:75786794-75786813 Msa0044290:intron 20.0%
!!! TTATCTCTTACTTTTATTGA+AGG - chr1_1:75787194-75787213 Msa0044290:CDS 20.0%
!!! TTTTATTGAAGGAATCTATT+TGG - chr1_1:75787205-75787224 Msa0044290:CDS 20.0%
!! AAGAAGTTAGTATTAGTAAA+AGG - chr1_1:75787266-75787285 Msa0044290:CDS 20.0%
!!! TTTTTTAGTTAACCATCTTT+TGG - chr1_1:75787641-75787660 Msa0044290:CDS 20.0%
!! TTCTAATGCAAACATTTAAT+CGG - chr1_1:75787886-75787905 Msa0044290:intron 20.0%
!!! AAACAAACCATGATAAATTT+TGG + chr1_1:75788011-75788030 None:intergenic 20.0%
!! TGTTACTACTAAAAATTGAA+TGG + chr1_1:75788275-75788294 None:intergenic 20.0%
!! TACAAAAAAGATTGTTTACT+TGG + chr1_1:75788332-75788351 None:intergenic 20.0%
!!! TCTTAATTTGTTTTTCCAAG+AGG - chr1_1:75785599-75785618 Msa0044290:CDS 25.0%
!!! CTTAATTTGTTTTTCCAAGA+GGG - chr1_1:75785600-75785619 Msa0044290:CDS 25.0%
!!! TTACTTTGTATTTTTGACAG+AGG - chr1_1:75785872-75785891 Msa0044290:intron 25.0%
!! GATTTTCTTTATGCATAACA+AGG - chr1_1:75786258-75786277 Msa0044290:intron 25.0%
! ATAATCCAAATCAAACCATA+AGG + chr1_1:75786812-75786831 None:intergenic 25.0%
! AAGTAAGAGATAAAGAAAGT+TGG + chr1_1:75787187-75787206 None:intergenic 25.0%
! AAAAATTAAAACAGCTACCA+TGG + chr1_1:75787326-75787345 None:intergenic 25.0%
!!! TGGTAGCTGTTTTAATTTTT+AGG - chr1_1:75787326-75787345 Msa0044290:CDS 25.0%
!!! TAGCTGTTTTAATTTTTAGG+TGG - chr1_1:75787329-75787348 Msa0044290:CDS 25.0%
! GAAAGGTTTAAATATTGAAC+AGG + chr1_1:75787505-75787524 None:intergenic 25.0%
!! AGTATAGTCTTGAAATGAAA+AGG + chr1_1:75787594-75787613 None:intergenic 25.0%
! TCTAATGCAAACATTTAATC+GGG - chr1_1:75787887-75787906 Msa0044290:intron 25.0%
! AAAAAATCTAACCACTTCTT+AGG + chr1_1:75787914-75787933 None:intergenic 25.0%
!!! AAGAAGTGGTTAGATTTTTT+TGG - chr1_1:75787914-75787933 Msa0044290:intron 25.0%
! CTAACCATTATACTCTATAT+AGG + chr1_1:75787952-75787971 None:intergenic 25.0%
! CTATATAGAGTATAATGGTT+AGG - chr1_1:75787950-75787969 Msa0044290:intron 25.0%
! TCATTGTCCAAAATTTATCA+TGG - chr1_1:75788001-75788020 Msa0044290:intron 25.0%
! AAAGTCGTATTCCAATAATT+AGG + chr1_1:75788133-75788152 None:intergenic 25.0%
!! TTTTAGTAGTAACATGTACA+TGG - chr1_1:75788281-75788300 Msa0044290:intron 25.0%
! AAAAAGATTGTTTACTTGGA+TGG + chr1_1:75788328-75788347 None:intergenic 25.0%
! GACAAATTTATTTACATGTG+TGG - chr1_1:75788444-75788463 Msa0044290:intron 25.0%
!! TGTGTAACATCTTTTACTTT+AGG - chr1_1:75788827-75788846 Msa0044290:five_prime_UTR 25.0%
! AAGAAAGAGAATAAAGAAAG+AGG + chr1_1:75788868-75788887 None:intergenic 25.0%
!! TGAAAATTCCTTTAGGACAT+TGG + chr1_1:75785365-75785384 None:intergenic 30.0%
TAGAAAATGAGTAGTAGTTG+TGG - chr1_1:75785649-75785668 Msa0044290:CDS 30.0%
ATCAACTGAAGAACAAGTTT+AGG + chr1_1:75785903-75785922 None:intergenic 30.0%
! TAAACTTGTTCTTCAGTTGA+TGG - chr1_1:75785902-75785921 Msa0044290:intron 30.0%
!! TTCAGTTGATGGATATCAAA+GGG - chr1_1:75785913-75785932 Msa0044290:intron 30.0%
AATGAAAATGAACCTGAAGA+TGG + chr1_1:75785962-75785981 None:intergenic 30.0%
ACATCTGGTTATCATAAAGA+AGG + chr1_1:75786037-75786056 None:intergenic 30.0%
! AATCCACAAGGGAATTATTT+TGG + chr1_1:75786242-75786261 None:intergenic 30.0%
TGCATAAAGAAAATCCACAA+GGG + chr1_1:75786253-75786272 None:intergenic 30.0%
ATGCATAAAGAAAATCCACA+AGG + chr1_1:75786254-75786273 None:intergenic 30.0%
TCCTTGTAGATTTCTTCTAA+TGG - chr1_1:75786366-75786385 Msa0044290:intron 30.0%
ACCATTAGAAGAAATCTACA+AGG + chr1_1:75786370-75786389 None:intergenic 30.0%
TGTAGCAAACATAATAGTAG+TGG + chr1_1:75786417-75786436 None:intergenic 30.0%
! TCTAATGAATGTGTTTTCTC+AGG - chr1_1:75786497-75786516 Msa0044290:intron 30.0%
!! AAGACATTGGTTTCTATGTT+GGG + chr1_1:75786534-75786553 None:intergenic 30.0%
ATGTTGAGTATTCTTTGATG+AGG - chr1_1:75786597-75786616 Msa0044290:intron 30.0%
GAATCTGATTCTTCTTTCAT+TGG - chr1_1:75786623-75786642 Msa0044290:intron 30.0%
ACAGTAACAACTTCTCAAAA+AGG - chr1_1:75786648-75786667 Msa0044290:intron 30.0%
TAAGTCCTTATGGTTTGATT+TGG - chr1_1:75786804-75786823 Msa0044290:intron 30.0%
ACATAGTCATAAAAGCAGTA+CGG + chr1_1:75786929-75786948 None:intergenic 30.0%
TTAGAGATTTGAAAGAAGTG+AGG + chr1_1:75787096-75787115 None:intergenic 30.0%
!!! CTGTTTTAATTTTTAGGTGG+TGG - chr1_1:75787332-75787351 Msa0044290:CDS 30.0%
AATTTCTCTGTCAATGCTAT+AGG - chr1_1:75787378-75787397 Msa0044290:CDS 30.0%
!! TGAACAAAAGTGAAAGTGTT+AGG + chr1_1:75787464-75787483 None:intergenic 30.0%
CTAATGCAAACATTTAATCG+GGG - chr1_1:75787888-75787907 Msa0044290:intron 30.0%
ACGACCTATATAGAGTATAA+TGG - chr1_1:75787945-75787964 Msa0044290:intron 30.0%
!!! TGGAATACGACTTTTTCATT+TGG - chr1_1:75788139-75788158 Msa0044290:intron 30.0%
! GTCCTTTTGTGCAATTTATA+TGG - chr1_1:75788174-75788193 Msa0044290:intron 30.0%
GACCATATAAATTGCACAAA+AGG + chr1_1:75788179-75788198 None:intergenic 30.0%
ACCACTATAGGAACTTATAA+TGG - chr1_1:75788360-75788379 Msa0044290:CDS 30.0%
TCCATTATAAGTTCCTATAG+TGG + chr1_1:75788364-75788383 None:intergenic 30.0%
ACTGGCAACAACAATTATTA+TGG - chr1_1:75788394-75788413 Msa0044290:intron 30.0%
GACAAGTAATGCTTCTTATT+CGG - chr1_1:75788639-75788658 Msa0044290:five_prime_UTR 30.0%
TATCATCTACTGTGAATGAA+AGG - chr1_1:75788749-75788768 Msa0044290:five_prime_UTR 30.0%
ATCAAATCAATTGCCACAAA+TGG + chr1_1:75788797-75788816 None:intergenic 30.0%
GTAATATCTGATCCTTCTGA+TGG + chr1_1:75785334-75785353 None:intergenic 35.0%
!! AGAGCTCTGAAAATTCCTTT+AGG + chr1_1:75785372-75785391 None:intergenic 35.0%
GAGAGAAAATGAAAAGACGA+AGG + chr1_1:75785405-75785424 None:intergenic 35.0%
!! ATAGTACTTTTTGCACCCTA+TGG + chr1_1:75785472-75785491 None:intergenic 35.0%
!! ATTTGTTTTTCCAAGAGGGT+TGG - chr1_1:75785604-75785623 Msa0044290:CDS 35.0%
AACAAATATTCCAACCCTCT+TGG + chr1_1:75785617-75785636 None:intergenic 35.0%
!! CTTCAGTTGATGGATATCAA+AGG - chr1_1:75785912-75785931 Msa0044290:intron 35.0%
GTTCCAAAATAATTCCCTTG+TGG - chr1_1:75786236-75786255 Msa0044290:intron 35.0%
GGCATCAACTAAATGCAAAA+GGG + chr1_1:75786314-75786333 None:intergenic 35.0%
TGGCATCAACTAAATGCAAA+AGG + chr1_1:75786315-75786334 None:intergenic 35.0%
!! TTAGTCTTCCTACACTGTTT+TGG + chr1_1:75786335-75786354 None:intergenic 35.0%
! ATGAATGTGTTTTCTCAGGT+AGG - chr1_1:75786501-75786520 Msa0044290:intron 35.0%
!! CAAGACATTGGTTTCTATGT+TGG + chr1_1:75786535-75786554 None:intergenic 35.0%
GCAGAACAAGAAAGGAATAA+AGG - chr1_1:75786994-75787013 Msa0044290:intron 35.0%
!! ATGAACAACAGTTTTGTGCA+TGG - chr1_1:75787017-75787036 Msa0044290:intron 35.0%
TCTGGTAGCAAAGTTGAATT+GGG + chr1_1:75787061-75787080 None:intergenic 35.0%
ATCTGGTAGCAAAGTTGAAT+TGG + chr1_1:75787062-75787081 None:intergenic 35.0%
! TCAACTTTGCTACCAGATTT+TGG - chr1_1:75787064-75787083 Msa0044290:intron 35.0%
ATATAGCTGCTTAAGAACCT+AGG - chr1_1:75787401-75787420 Msa0044290:CDS 35.0%
AGTCTTGACTTACCAAAAGA+TGG + chr1_1:75787656-75787675 None:intergenic 35.0%
! TTTTGGTAAGTCAAGACTGT+GGG - chr1_1:75787658-75787677 Msa0044290:CDS 35.0%
! TTTTCACAACAGTAGAAGCA+AGG + chr1_1:75787687-75787706 None:intergenic 35.0%
GTTTGTTCCATTATTCTCCA+CGG - chr1_1:75787775-75787794 Msa0044290:intron 35.0%
! TTTTCAAAAAACCAACTCCG+TGG + chr1_1:75787795-75787814 None:intergenic 35.0%
ACTCTATATAGGTCGTACAA+GGG + chr1_1:75787941-75787960 None:intergenic 35.0%
TACTCTATATAGGTCGTACA+AGG + chr1_1:75787942-75787961 None:intergenic 35.0%
AAGTCACAATATGAGCCTTT+CGG + chr1_1:75788043-75788062 None:intergenic 35.0%
CAGTGAATGTCAAATAAAGG+AGG + chr1_1:75788091-75788110 None:intergenic 35.0%
GAGCAGTGAATGTCAAATAA+AGG + chr1_1:75788094-75788113 None:intergenic 35.0%
CGTATTCCAATAATTAGGCA+AGG + chr1_1:75788128-75788147 None:intergenic 35.0%
! ACTTCTTTTGAATGTGCATG+TGG - chr1_1:75788202-75788221 Msa0044290:CDS 35.0%
TGTATTTGACTCACCACTAT+AGG - chr1_1:75788348-75788367 Msa0044290:CDS 35.0%
GGACAAACACACTTAACAAA+TGG + chr1_1:75788470-75788489 None:intergenic 35.0%
! TACATTACTAGCCTGTACAA+GGG + chr1_1:75788491-75788510 None:intergenic 35.0%
! TTACATTACTAGCCTGTACA+AGG + chr1_1:75788492-75788511 None:intergenic 35.0%
GTCCATTAATTGACCATGAA+GGG + chr1_1:75788528-75788547 None:intergenic 35.0%
AGTCCATTAATTGACCATGA+AGG + chr1_1:75788529-75788548 None:intergenic 35.0%
!! TAAGAAGCATTACTTGTCTG+AGG + chr1_1:75788637-75788656 None:intergenic 35.0%
ATGGAAAACAGAATCCAGCT+GGG + chr1_1:75785453-75785472 None:intergenic 40.0%
TATGGAAAACAGAATCCAGC+TGG + chr1_1:75785454-75785473 None:intergenic 40.0%
! AGCTGGATTCTGTTTTCCAT+AGG - chr1_1:75785453-75785472 Msa0044290:exon 40.0%
! GCTGGATTCTGTTTTCCATA+GGG - chr1_1:75785454-75785473 Msa0044290:exon 40.0%
AGTAGTAGTTGTGGAAGAGA+AGG - chr1_1:75785658-75785677 Msa0044290:CDS 40.0%
ACAAAGCAACGATGAAGTTC+AGG + chr1_1:75785748-75785767 None:intergenic 40.0%
GTTCATGCTATTCAAACCCT+TGG - chr1_1:75785766-75785785 Msa0044290:intron 40.0%
CTTACTATGATGACCTCCAA+GGG + chr1_1:75785785-75785804 None:intergenic 40.0%
ACTTACTATGATGACCTCCA+AGG + chr1_1:75785786-75785805 None:intergenic 40.0%
CTCTCATGCTTCTATACATC+TGG + chr1_1:75786052-75786071 None:intergenic 40.0%
! CAGATGTATAGAAGCATGAG+AGG - chr1_1:75786050-75786069 Msa0044290:intron 40.0%
! AGAAGCATGAGAGGTGAATT+AGG - chr1_1:75786059-75786078 Msa0044290:intron 40.0%
AGAGGTGAATTAGGAAGACA+AGG - chr1_1:75786068-75786087 Msa0044290:intron 40.0%
! AGTTGATGCCAAAACAGTGT+AGG - chr1_1:75786324-75786343 Msa0044290:intron 40.0%
CATCATGCTCTTCAAGACAT+TGG + chr1_1:75786547-75786566 None:intergenic 40.0%
! TGTCTTGAAGAGCATGATGA+TGG - chr1_1:75786548-75786567 Msa0044290:intron 40.0%
AATGCCAATGCCAATACCAT+GGG - chr1_1:75786956-75786975 Msa0044290:intron 40.0%
GTGAGGTTTATGCCAAAATC+TGG + chr1_1:75787079-75787098 None:intergenic 40.0%
CCTGAGAGAAATCAGATTCT+TGG + chr1_1:75787120-75787139 None:intergenic 40.0%
CCAAGAATCTGATTTCTCTC+AGG - chr1_1:75787117-75787136 Msa0044290:intron 40.0%
GCATTTCAACTTCTACACCA+TGG - chr1_1:75787306-75787325 Msa0044290:CDS 40.0%
!!! AATTTTTAGGTGGTGGAGTG+TGG - chr1_1:75787339-75787358 Msa0044290:CDS 40.0%
!!! TGGAGTGTGGTATTGGTTTT+GGG - chr1_1:75787352-75787371 Msa0044290:CDS 40.0%
ATGGCTGTAGGTATAGTAGT+AGG - chr1_1:75787426-75787445 Msa0044290:intron 40.0%
AACGTGGATCCCAAAATGAA+AGG + chr1_1:75787522-75787541 None:intergenic 40.0%
GAAAAGAGAATGCATTGCAC+GGG + chr1_1:75787572-75787591 None:intergenic 40.0%
GGAAAAGAGAATGCATTGCA+CGG + chr1_1:75787573-75787592 None:intergenic 40.0%
! CTTTTGGTAAGTCAAGACTG+TGG - chr1_1:75787657-75787676 Msa0044290:CDS 40.0%
TTTGGTAAGTCAAGACTGTG+GGG - chr1_1:75787659-75787678 Msa0044290:CDS 40.0%
TTCATTCTGCGTTTCAAACG+TGG + chr1_1:75787818-75787837 None:intergenic 40.0%
TTGTTTGCATTGTGACCGAA+AGG - chr1_1:75788025-75788044 Msa0044290:intron 40.0%
AGCCCTTCATGGTCAATTAA+TGG - chr1_1:75788523-75788542 Msa0044290:CDS 40.0%
AGAGCACATGTAGAAGTTGA+AGG - chr1_1:75788562-75788581 Msa0044290:CDS 40.0%
CATGTAGAAGTTGAAGGAGT+AGG - chr1_1:75788568-75788587 Msa0044290:CDS 40.0%
!! AATTGCCTCACTGATTTCAC+TGG + chr1_1:75788665-75788684 None:intergenic 40.0%
GACCTATCTTTAGCCATTTG+TGG - chr1_1:75788781-75788800 Msa0044290:five_prime_UTR 40.0%
TGCCACAAATGGCTAAAGAT+AGG + chr1_1:75788786-75788805 None:intergenic 40.0%
!! CTTTAGGACATTGGTGTCAC+TGG + chr1_1:75785356-75785375 None:intergenic 45.0%
CAGTGACACCAATGTCCTAA+AGG - chr1_1:75785354-75785373 Msa0044290:three_prime_UTR 45.0%
GAGAGAGGGGAATAAGTGTA+AGG + chr1_1:75785427-75785446 None:intergenic 45.0%
AGTAGTTGTGGAAGAGAAGG+AGG - chr1_1:75785661-75785680 Msa0044290:CDS 45.0%
CAAAAGTCCCTCGTTTGAGA+TGG - chr1_1:75785719-75785738 Msa0044290:CDS 45.0%
CATGCTATTCAAACCCTTGG+AGG - chr1_1:75785769-75785788 Msa0044290:intron 45.0%
CAATGCCAATGCCAATACCA+TGG - chr1_1:75786955-75786974 Msa0044290:intron 45.0%
!! ATCACCCATGGTATTGGCAT+TGG + chr1_1:75786963-75786982 None:intergenic 45.0%
!! AACAGTTTTGTGCATGGCAG+AGG - chr1_1:75787023-75787042 Msa0044290:intron 45.0%
GGTAGCAAAGTTGAATTGGG+TGG + chr1_1:75787058-75787077 None:intergenic 45.0%
!!! GTGGAGTGTGGTATTGGTTT+TGG - chr1_1:75787351-75787370 Msa0044290:CDS 45.0%
CTGCTTAAGAACCTAGGCTA+TGG - chr1_1:75787407-75787426 Msa0044290:CDS 45.0%
TATACCTACAGCCATAGCCT+AGG + chr1_1:75787421-75787440 None:intergenic 45.0%
!! CCAACGGTTTGGTATTAACG+TGG + chr1_1:75787538-75787557 None:intergenic 45.0%
CCACGTTAATACCAAACCGT+TGG - chr1_1:75787535-75787554 Msa0044290:intron 45.0%
CATCTGAGAAACCAACGGTT+TGG + chr1_1:75787549-75787568 None:intergenic 45.0%
TCCATTATTCTCCACGGAGT+TGG - chr1_1:75787781-75787800 Msa0044290:intron 45.0%
ACCAACTCCGTGGAGAATAA+TGG + chr1_1:75787785-75787804 None:intergenic 45.0%
TTTAATCGGGGCCTAAGAAG+TGG - chr1_1:75787900-75787919 Msa0044290:intron 45.0%
CCAATAATTAGGCAAGGAGC+AGG + chr1_1:75788122-75788141 None:intergenic 45.0%
CCTGCTCCTTGCCTAATTAT+TGG - chr1_1:75788119-75788138 Msa0044290:intron 45.0%
AGTGTGTTTGTCCCTTGTAC+AGG - chr1_1:75788477-75788496 Msa0044290:CDS 45.0%
ATGACAGAAAGAGCCCTTCA+TGG - chr1_1:75788512-75788531 Msa0044290:CDS 45.0%
GTAGAAGTTGAAGGAGTAGG+AGG - chr1_1:75788571-75788590 Msa0044290:CDS 45.0%
! GCATTACTTGTCTGAGGTGA+AGG + chr1_1:75788631-75788650 None:intergenic 45.0%
TTGTAGCTGCTAAACCCATC+AGG + chr1_1:75788715-75788734 None:intergenic 45.0%
!! TGATGGGTTTAGCAGCTACA+AGG - chr1_1:75788714-75788733 Msa0044290:five_prime_UTR 45.0%
CTTGTTCCTACTCACTCACT+CGG - chr1_1:75788907-75788926 Msa0044290:five_prime_UTR 45.0%
TTGTTCCTACTCACTCACTC+GGG - chr1_1:75788908-75788927 Msa0044290:five_prime_UTR 45.0%
AGTTGTGGAAGAGAAGGAGG+AGG - chr1_1:75785664-75785683 Msa0044290:CDS 50.0%
CAGGAGTCCATCTCAAACGA+GGG + chr1_1:75785729-75785748 None:intergenic 50.0%
TCAGGAGTCCATCTCAAACG+AGG + chr1_1:75785730-75785749 None:intergenic 50.0%
ACACGTCAAGAGCCATCTTC+AGG - chr1_1:75785947-75785966 Msa0044290:intron 50.0%
CTGCAGATCACCCATGGTAT+TGG + chr1_1:75786969-75786988 None:intergenic 50.0%
CAGCAGCTGCAGAACAAGAA+AGG - chr1_1:75786986-75787005 Msa0044290:intron 50.0%
!! TAGGTGGTGGAGTGTGGTAT+TGG - chr1_1:75787345-75787364 Msa0044290:CDS 50.0%
AGAACCTAGGCTATGGCTGT+AGG - chr1_1:75787414-75787433 Msa0044290:CDS 50.0%
ACGGGCATCTGAGAAACCAA+CGG + chr1_1:75787554-75787573 None:intergenic 50.0%
TTCGGCCAGTGAAATCAGTG+AGG - chr1_1:75788657-75788676 Msa0044290:five_prime_UTR 50.0%
TGCTAAACCCATCAGGACCA+GGG + chr1_1:75788708-75788727 None:intergenic 50.0%
ATCCAGCTGGGAGAGAGAGA+GGG + chr1_1:75785441-75785460 None:intergenic 55.0%
AATCCAGCTGGGAGAGAGAG+AGG + chr1_1:75785442-75785461 None:intergenic 55.0%
GGAAGAGAAGGAGGAGGATC+AGG - chr1_1:75785670-75785689 Msa0044290:CDS 55.0%
AGAGAAGGAGGAGGATCAGG+AGG - chr1_1:75785673-75785692 Msa0044290:CDS 55.0%
ATTAGGCAAGGAGCAGGAGC+AGG + chr1_1:75788116-75788135 None:intergenic 55.0%
ACCCATCAGGACCAGGGTTA+GGG + chr1_1:75788702-75788721 None:intergenic 55.0%
AACCCATCAGGACCAGGGTT+AGG + chr1_1:75788703-75788722 None:intergenic 55.0%
CTGCTAAACCCATCAGGACC+AGG + chr1_1:75788709-75788728 None:intergenic 55.0%
ATGCACCCGAGTGAGTGAGT+AGG + chr1_1:75788916-75788935 None:intergenic 55.0%
TCCAGCTGGGAGAGAGAGAG+GGG + chr1_1:75785440-75785459 None:intergenic 60.0%
GAGGATCAGGAGGAGCAGTG+AGG - chr1_1:75785683-75785702 Msa0044290:CDS 60.0%
CAGCTGCTGCAGATCACCCA+TGG + chr1_1:75786975-75786994 None:intergenic 60.0%
CCATCAGGACCAGGGTTAGG+GGG + chr1_1:75788700-75788719 None:intergenic 60.0%
CCCATCAGGACCAGGGTTAG+GGG + chr1_1:75788701-75788720 None:intergenic 60.0%
CCCCTAACCCTGGTCCTGAT+GGG - chr1_1:75788698-75788717 Msa0044290:five_prime_UTR 60.0%
TCCCCTCTCTCTCTCCCAGC+TGG - chr1_1:75785436-75785455 Msa0044290:three_prime_UTR 65.0%
TGCTGTCCTCCCCCTAACCC+TGG - chr1_1:75788688-75788707 Msa0044290:five_prime_UTR 65.0%
TCAGGACCAGGGTTAGGGGG+AGG + chr1_1:75788697-75788716 None:intergenic 65.0%
CCCCCTAACCCTGGTCCTGA+TGG - chr1_1:75788697-75788716 Msa0044290:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 75785328 75788946 75785328 ID=Msa0044290;Name=Msa0044290
chr1_1 mRNA 75785328 75788946 75785328 ID=Msa0044290-mRNA-1;Parent=Msa0044290;Name=Msa0044290-mRNA-1;_AED=0.05;_eAED=0.05;_QI=327|1|1|1|1|1|6|136|339
chr1_1 exon 75785328 75785775 75785328 ID=Msa0044290-mRNA-1:exon:25631;Parent=Msa0044290-mRNA-1
chr1_1 exon 75787136 75787433 75787136 ID=Msa0044290-mRNA-1:exon:25630;Parent=Msa0044290-mRNA-1
chr1_1 exon 75787605 75787755 75787605 ID=Msa0044290-mRNA-1:exon:25629;Parent=Msa0044290-mRNA-1
chr1_1 exon 75788185 75788221 75788185 ID=Msa0044290-mRNA-1:exon:25628;Parent=Msa0044290-mRNA-1
chr1_1 exon 75788306 75788382 75788306 ID=Msa0044290-mRNA-1:exon:25627;Parent=Msa0044290-mRNA-1
chr1_1 exon 75788475 75788946 75788475 ID=Msa0044290-mRNA-1:exon:25626;Parent=Msa0044290-mRNA-1
chr1_1 five_prime_UTR 75788620 75788946 75788620 ID=Msa0044290-mRNA-1:five_prime_utr;Parent=Msa0044290-mRNA-1
chr1_1 CDS 75788475 75788619 75788475 ID=Msa0044290-mRNA-1:cds;Parent=Msa0044290-mRNA-1
chr1_1 CDS 75788306 75788382 75788306 ID=Msa0044290-mRNA-1:cds;Parent=Msa0044290-mRNA-1
chr1_1 CDS 75788185 75788221 75788185 ID=Msa0044290-mRNA-1:cds;Parent=Msa0044290-mRNA-1
chr1_1 CDS 75787605 75787755 75787605 ID=Msa0044290-mRNA-1:cds;Parent=Msa0044290-mRNA-1
chr1_1 CDS 75787136 75787433 75787136 ID=Msa0044290-mRNA-1:cds;Parent=Msa0044290-mRNA-1
chr1_1 CDS 75785464 75785775 75785464 ID=Msa0044290-mRNA-1:cds;Parent=Msa0044290-mRNA-1
chr1_1 three_prime_UTR 75785328 75785463 75785328 ID=Msa0044290-mRNA-1:three_prime_utr;Parent=Msa0044290-mRNA-1
Gene Sequence

>Msa0044290

ATGAGTAGTAGTTGTGGAAGAGAAGGAGGAGGATCAGGAGGAGCAGTGAGGCAGTATATAAGATCAAAAGTCCCTCGTTTGAGATGGACTCCTGAACTTCATCGTTGCTTTGTTCATGCTATTCAAACCCTTGGAGGTCATCATAAGGCTACTCCTAAACTTGTTCTTCAGTTGATGGATATCAAAGGGCTCACTATTTCACACGTCAAGAGCCATCTTCAGATGTATAGAAGCATGAGAGGTGAATTAGGAAGACAAGGTAGGACAAGCTCCCAACATAGAAACCAATGTCTTGAAGAGCATGATGATGGATGTGTTGATGAAGTGAATGATGTTAATGTTGAGTATTCTTTGATGAGGAGAGAATCTGATTCTTCTTTCATTGGTCACAGTAACAACTTCTCAAAAAGAGCTAGAATCGAGAGAAGAAGTTCTACAACTAGTCTGCAATGCAGCAGTGAAAGAAGAAGAATATGTGATGATGCAGTAACAAAACCGTACTGCTTTTATGACTATGTACAGCTCAATGCCAATGCCAATACCATGGGTGATCTGCAGCAGCTGCAGAACAAGAAAGGAATAAAGGATGAACAACAGTTTTGTGCATGGCAGAGGCAAATTCAACCACCCAATTCAACTTTGCTACCAGATTTTGGCATAAACCTCACTTCTTTCAAATCTCTAAACCAAGAATCTGATTTCTCTCAGGCTAGTAATGTAAATGACAGAAAGAGCCCTTCATGGTCAATTAATGGACTTGTGAAAACTGACAGAGCACATGTAGAAGTTGAAGGAGTAGGAGGACATGAGTTGTCATTGTCGTTAACATTGCAAAATCCTTCACCTCAGACAAGTAATGCTTCTTATTCGGCCAGTGAAATCAGTGAGGCAATTTCATGCTGTCCTCCCCCTAACCCTGGTCCTGATGGGTTTAGCAGCTACAAGGACTGCTCTAGAATATCATCTACTGTGAATGAAAGGATTAATTTAGACCTATCTTTAGCCATTTGTGGCAATTGA
Protein sequence

>Msa0044290

MSSSCGREGGGSGGAVRQYIRSKVPRLRWTPELHRCFVHAIQTLGGHHKATPKLVLQLMDIKGLTISHVKSHLQMYRSMRGELGRQGRTSSQHRNQCLEEHDDGCVDEVNDVNVEYSLMRRESDSSFIGHSNNFSKRARIERRSSTTSLQCSSERRRICDDAVTKPYCFYDYVQLNANANTMGDLQQLQNKKGIKDEQQFCAWQRQIQPPNSTLLPDFGINLTSFKSLNQESDFSQASNVNDRKSPSWSINGLVKTDRAHVEVEGVGGHELSLSLTLQNPSPQTSNASYSASEISEAISCCPPPNPGPDGFSSYKDCSRISSTVNERINLDLSLAICGN*