AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0048070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0048070 MtrunA17_Chr7g0222951 99.511 1023 5 0 1 1023 1 1023 0.0 2132
Msa0048070 MtrunA17_Chr1g0212551 87.220 1025 127 3 1 1023 1 1023 0.0 1900
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0048070 AT5G65750.1 82.796 1023 171 3 1 1020 1 1021 0.0 1825
Msa0048070 AT3G55410.2 82.779 1022 169 5 1 1020 1 1017 0.0 1819
Msa0048070 AT3G55410.1 82.779 1022 169 5 1 1020 1 1017 0.0 1819

Find 292 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCCAATTCATTGATAATT+TGG 0.050718 1_1:-81415554 Msa0048070:CDS
CTTTCAGAGTTTGCTGTTCT+TGG 0.081358 1_1:-81415603 Msa0048070:CDS
GATTTGGATCCGGCGCTTTA+TGG 0.133372 1_1:-81418338 Msa0048070:CDS
TTGCTACGAAGCAGGTTCTT+AGG 0.222500 1_1:+81414464 None:intergenic
TGTGATATTTGACAATTTCT+TGG 0.231682 1_1:-81415496 Msa0048070:CDS
GTTCCACCCGTAGTGTAATT+TGG 0.249800 1_1:+81417534 None:intergenic
GAAGATATTGACTGGGGATT+TGG 0.252622 1_1:-81416696 Msa0048070:CDS
TGGGACAAGTAGTGTGTATT+TGG 0.255505 1_1:-81418585 Msa0048070:CDS
TTCCCAAATTATCAATGAAT+TGG 0.266490 1_1:+81415551 None:intergenic
TTTGACAATTTCTTGGCTTC+TGG 0.268054 1_1:-81415489 Msa0048070:CDS
CAATCTCAGCTTGCTCCTTC+TGG 0.268204 1_1:+81413646 None:intergenic
GTTAGGGCTTATCAGGTTAA+TGG 0.270805 1_1:-81418416 Msa0048070:CDS
AGATTTATGATTGTCGAAAA+TGG 0.270900 1_1:+81419146 None:intergenic
CAGGGGAAGATTGAATGTTT+TGG 0.275861 1_1:-81417901 Msa0048070:CDS
GTTGATGGTTAGGGCTTATC+AGG 0.277839 1_1:-81418423 Msa0048070:CDS
AATCTATCAGAAGAAGCTTT+TGG 0.278042 1_1:-81417108 Msa0048070:CDS
CGAACCTGAGAGGAAGAAAA+TGG 0.285686 1_1:+81419046 None:intergenic
ATAATTTGGGAAGCACAATT+TGG 0.286847 1_1:-81415540 Msa0048070:CDS
AGGCTTATTGTGGGAGTATT+GGG 0.290272 1_1:-81418199 Msa0048070:CDS
GAGTACGTCGCCTGGGATAT+CGG 0.291478 1_1:-81418477 Msa0048070:CDS
CGCTTCGCTTCCACGCGATT+AGG 0.294013 1_1:-81419087 Msa0048070:five_prime_UTR
CGGATCGTGAGAAGTGTAAT+TGG 0.298443 1_1:-81418157 Msa0048070:CDS
TCCCAAATTATCAATGAATT+GGG 0.299078 1_1:+81415552 None:intergenic
TGCTGTTCTTGGATTTGAAT+TGG 0.299100 1_1:-81415592 Msa0048070:CDS
GAAGTTGGATCCGTTGAATT+TGG 0.300729 1_1:-81418381 Msa0048070:CDS
ATTTGGATCCGGCGCTTTAT+GGG 0.301709 1_1:-81418337 Msa0048070:CDS
CCCCAATTCATTGATAATTT+GGG 0.306831 1_1:-81415553 Msa0048070:CDS
CTACACCGGTGCAGTTTAAC+AGG 0.310100 1_1:-81418112 Msa0048070:CDS
CAAGAGGATACATTTGTCTT+TGG 0.313091 1_1:-81417733 Msa0048070:CDS
CGGATACGGGAAAGCTGTTC+AGG 0.316490 1_1:+81416942 None:intergenic
CACGACTCGTCGACACTATT+CGG 0.319198 1_1:+81418533 None:intergenic
GCCAAGTGGCTCCGTCAGAC+TGG 0.327346 1_1:-81415462 Msa0048070:CDS
AGTTGACTGGCTCGCGTTGA+AGG 0.327800 1_1:+81413613 None:intergenic
GGCTATCAGCATACTGGCTT+GGG 0.338769 1_1:-81416974 Msa0048070:CDS
AGATCTGACGCAGCGGCTTC+CGG 0.339817 1_1:+81417868 None:intergenic
TGAGGTTGTTGTTGATGGTT+AGG 0.340797 1_1:-81418433 Msa0048070:CDS
GTCCCAAGGAAATAAAATTA+AGG 0.342396 1_1:-81413268 Msa0048070:three_prime_UTR
GTTTGAGTATATGCATATTT+CGG 0.342714 1_1:-81418177 Msa0048070:CDS
GGACTTCCGCGAAGAGGTTT+GGG 0.343500 1_1:-81418019 Msa0048070:CDS
ACCCCTACCTACAGCTTTCA+TGG 0.344640 1_1:+81413740 None:intergenic
AGTCGTGGGATAATTTCTTT+AGG 0.344940 1_1:-81418517 Msa0048070:CDS
TGGACTTCCGCGAAGAGGTT+TGG 0.345909 1_1:-81418020 Msa0048070:CDS
CAGGCTTATTGTGGGAGTAT+TGG 0.346380 1_1:-81418200 Msa0048070:CDS
TTGATCGAGCATCTGATCTT+GGG 0.347316 1_1:-81417953 Msa0048070:CDS
GCTTCGCTTCCACGCGATTA+GGG 0.355623 1_1:-81419086 Msa0048070:five_prime_UTR
TTATAGATGCAGAGGTTGTT+TGG 0.358243 1_1:-81413824 Msa0048070:intron
TCCATCTCAGGGATAATATA+CGG 0.364075 1_1:+81414703 None:intergenic
AACTTTCTACCATTTGTAGA+TGG 0.365184 1_1:+81418689 None:intergenic
GGACATCATCGAACTCTGAT+AGG 0.367481 1_1:+81414426 None:intergenic
TATACTTTGTAATCTTGAAA+TGG 0.369965 1_1:-81413366 Msa0048070:three_prime_UTR
CACTTGAATGCTCAGGGCCC+TGG 0.370641 1_1:+81415406 None:intergenic
TGCTACGAAGCAGGTTCTTA+GGG 0.370885 1_1:+81414465 None:intergenic
AACGGAACCGCACGCGGAAC+CGG 0.371327 1_1:+81418635 None:intergenic
TCCTCATGGTTATGATGGCC+AGG 0.374110 1_1:-81415424 Msa0048070:CDS
GCTCCCATCTTTCATGTTAA+CGG 0.374671 1_1:-81417414 Msa0048070:CDS
CGAAGAGTTGGATCCATCTC+AGG 0.375711 1_1:+81414691 None:intergenic
GGGGTTGAGAGCATAGTTAT+TGG 0.375790 1_1:-81417933 Msa0048070:CDS
TTCAGACGTGGTTGTGGACT+TGG 0.376411 1_1:-81417328 Msa0048070:CDS
TTTGCTACCTTGCTTGTTGA+AGG 0.381373 1_1:-81416660 Msa0048070:CDS
TTTGATCGAGCATCTGATCT+TGG 0.381536 1_1:-81417954 Msa0048070:CDS
GCTGTTCTTGGATTTGAATT+GGG 0.382397 1_1:-81415591 Msa0048070:CDS
ATTTACCATACCCAGTGTTT+CGG 0.384328 1_1:+81416922 None:intergenic
GAGGCAGATACCGGATGATT+TGG 0.391915 1_1:-81418354 Msa0048070:CDS
TGATAGATTTCAAGAGTTGA+AGG 0.392420 1_1:+81417122 None:intergenic
GTTCCCTGTTTGTCAAAACC+TGG 0.393470 1_1:+81414395 None:intergenic
ACTTGATGATCATCGATCTA+AGG 0.395435 1_1:-81414163 Msa0048070:CDS
TCTCGTTGGACAAGGTCATA+TGG 0.395888 1_1:+81414090 None:intergenic
TTAGTGAGGCAGATCTTGAT+AGG 0.396150 1_1:-81418313 Msa0048070:CDS
GTGAGAAGTGTAATTGGCTT+AGG 0.396829 1_1:-81418151 Msa0048070:CDS
AGTACGTCGCCTGGGATATC+GGG 0.396915 1_1:-81418476 Msa0048070:CDS
TTGGTGTGTTATCGTCGATT+TGG 0.403974 1_1:-81417309 Msa0048070:CDS
AATCTTGCACTTGAATGCTC+AGG 0.404835 1_1:+81415399 None:intergenic
ATCCTCTTCACTGCTTTATG+AGG 0.408125 1_1:+81416753 None:intergenic
AAGTATGAGGTTGTTGTTGA+TGG 0.410070 1_1:-81418438 Msa0048070:CDS
ATTTGAATTGGGTTACTCAA+TGG 0.410105 1_1:-81415580 Msa0048070:CDS
TGAGCATTCAAGTGCAAGAT+TGG 0.412552 1_1:-81415397 Msa0048070:CDS
GAGGATACATTTGTCTTTGG+TGG 0.414441 1_1:-81417730 Msa0048070:CDS
ATAGTTCATGATCAGACAAC+TGG 0.416036 1_1:-81416576 Msa0048070:CDS
AGTGAACTATAATCCTCAAA+AGG 0.417421 1_1:+81413560 None:intergenic
CCACGTCTGAATGGAACGTT+TGG 0.420226 1_1:+81417340 None:intergenic
CTTCATCATATCTTGTATCT+AGG 0.422168 1_1:-81418724 Msa0048070:CDS
TTGGGTGTTTGGAGGATGGC+GGG 0.423485 1_1:-81418281 Msa0048070:CDS
CCATCTGCTGCCACAGCCAC+CGG 0.426057 1_1:-81413684 Msa0048070:CDS
CTGTCGACCCCGTTGTTGTT+GGG 0.430529 1_1:-81417686 Msa0048070:CDS
GCTGTCGACCCCGTTGTTGT+TGG 0.430717 1_1:-81417687 Msa0048070:CDS
GATTTGTTTAAATTTACATA+AGG 0.433686 1_1:-81413536 Msa0048070:three_prime_UTR
CTCTCGCCTGAGGATGAAGT+TGG 0.435611 1_1:-81417825 Msa0048070:CDS
CAACAGTGGAGTGGTCATTT+CGG 0.438305 1_1:+81414348 None:intergenic
AACTCTTCGGAAACAGATTC+AGG 0.441296 1_1:-81414677 Msa0048070:CDS
TGGACATATGAAGGCGAAGT+TGG 0.442145 1_1:-81418396 Msa0048070:CDS
CTAGTTGTGTTGCTTCCTCA+TGG 0.446907 1_1:-81415438 Msa0048070:CDS
CTGTTAAACTGCACCGGTGT+AGG 0.447423 1_1:+81418113 None:intergenic
CTATATTTGATAGGCTTGCT+TGG 0.449306 1_1:-81418076 Msa0048070:CDS
GGGCAAGCGAGTACGTCGCC+TGG 0.451006 1_1:-81418485 Msa0048070:CDS
CATACCCAGTGTTTCGGATA+CGG 0.451366 1_1:+81416928 None:intergenic
AAATTCTTCATTTAGAATTG+AGG 0.451925 1_1:+81417034 None:intergenic
GGAGGGGAGACTCTTATTCC+TGG 0.452739 1_1:-81417990 Msa0048070:CDS
GTTGGGCTTTACACGGGAAC+TGG 0.454211 1_1:-81417807 Msa0048070:CDS
AGATGTTTACTGTTAGCAAC+AGG 0.454949 1_1:-81416506 Msa0048070:intron
GCGAAGAGGTTTGGGCTTGA+AGG 0.455500 1_1:-81418011 Msa0048070:CDS
TTGGAAGAGCACTTAAATGC+AGG 0.460608 1_1:+81417553 None:intergenic
CAATTTCTTGGCTTCTGGTG+AGG 0.460701 1_1:-81415484 Msa0048070:CDS
TGGCTATCAGCATACTGGCT+TGG 0.460856 1_1:-81416975 Msa0048070:CDS
GGCTTGAGCAGGCTTATTGT+GGG 0.461375 1_1:-81418208 Msa0048070:CDS
TTGCTTCCTCATGGTTATGA+TGG 0.464834 1_1:-81415429 Msa0048070:CDS
CCGGTGGCTGTGGCAGCAGA+TGG 0.469601 1_1:+81413684 None:intergenic
AAGATTGGAACGCTTTCTTC+AGG 0.471894 1_1:-81415382 Msa0048070:intron
TGGAGGAGTTGCAGAGGGCA+TGG 0.472558 1_1:-81418565 Msa0048070:CDS
TTTCAGAATGGGAAGTTGAC+TGG 0.472643 1_1:+81413600 None:intergenic
TTCCATGAAAGCTGTAGGTA+GGG 0.473317 1_1:-81413742 Msa0048070:CDS
TTTACAACTGATCCAATGTC+TGG 0.473719 1_1:-81417480 Msa0048070:CDS
TTTGGGTGTTTGGAGGATGG+CGG 0.477127 1_1:-81418282 Msa0048070:CDS
CCCAGTCTGACGGAGCCACT+TGG 0.477610 1_1:+81415461 None:intergenic
ATCGACCTAAGCGTCTGAAC+AGG 0.478872 1_1:+81418239 None:intergenic
CGTGCGCAAATGATCGAGAC+TGG 0.480493 1_1:-81416720 Msa0048070:CDS
CACACAGCCTAAAATGTACA+AGG 0.481882 1_1:-81417259 Msa0048070:intron
GGAAGAAAATGGGAGAAAGA+TGG 0.484757 1_1:+81419057 None:intergenic
ATCACCGTTAACATGAAAGA+TGG 0.486539 1_1:+81417410 None:intergenic
GAGGTTGTTGTTGATGGTTA+GGG 0.487959 1_1:-81418432 Msa0048070:CDS
GCGGAATAATTCAATCTTGA+GGG 0.489548 1_1:+81413315 None:intergenic
CTTGAGGAAACCGGTGGCTG+TGG 0.489663 1_1:+81413674 None:intergenic
TTTCCATGTTCTAAGGAGGC+AGG 0.490637 1_1:-81414611 Msa0048070:intron
TGAATCTGTTTCCGAAGAGT+TGG 0.491307 1_1:+81414679 None:intergenic
GGAGGAGTTGCAGAGGGCAT+GGG 0.493279 1_1:-81418564 Msa0048070:CDS
GTGTATCCACCCATGTTCAT+TGG 0.493780 1_1:+81413789 None:intergenic
AGGCTTGAGCAGGCTTATTG+TGG 0.494311 1_1:-81418209 Msa0048070:CDS
TGCAAGCCTTGCTACGAAGC+AGG 0.494318 1_1:+81414456 None:intergenic
GAGATTGGCTATCAGCATAC+TGG 0.494615 1_1:-81416980 Msa0048070:CDS
TGAGAAGTGTAATTGGCTTA+GGG 0.495194 1_1:-81418150 Msa0048070:CDS
TTCAAGCCCAAACCTCTTCG+CGG 0.499350 1_1:+81418013 None:intergenic
CTGAGATGGATCCAACTCTT+CGG 0.499715 1_1:-81414690 Msa0048070:CDS
ATAGGCCTGTTCAGACGCTT+AGG 0.501689 1_1:-81418244 Msa0048070:CDS
AGACGTTTAGTACTCTGCTC+TGG 0.504078 1_1:-81414314 Msa0048070:CDS
AGACTGGGGAAGATATTGAC+TGG 0.504639 1_1:-81416704 Msa0048070:CDS
TTTGTAATCTTGAAATGGAT+TGG 0.504749 1_1:-81413361 Msa0048070:three_prime_UTR
AGCTGCACCGGTTCCGCGTG+CGG 0.504781 1_1:-81418642 Msa0048070:CDS
GTTGACTGGCTCGCGTTGAA+GGG 0.504971 1_1:+81413614 None:intergenic
CCTCTTCGCGGAAGTCCACT+TGG 0.505423 1_1:+81418025 None:intergenic
AGTCCACAACCACGTCTGAA+TGG 0.505810 1_1:+81417331 None:intergenic
ATTGTTTAACACAATGTGAA+TGG 0.506188 1_1:+81417512 None:intergenic
TAAAGCCCAACTTCATCCTC+AGG 0.507759 1_1:+81417819 None:intergenic
ATACCCAGTGTTTCGGATAC+GGG 0.509147 1_1:+81416929 None:intergenic
TTTGGAAGCGAGGCAGATAC+CGG 0.511623 1_1:-81418363 Msa0048070:CDS
CCACTCAGCAGCAAGTTCAC+AGG 0.513384 1_1:+81417365 None:intergenic
GTTCCATTCAGACGTGGTTG+TGG 0.514491 1_1:-81417334 Msa0048070:CDS
TTTCATGGAAGATACAAGTC+GGG 0.514659 1_1:+81413755 None:intergenic
CCATGTTCGATTGAGTGGTC+AGG 0.514938 1_1:-81416634 Msa0048070:CDS
TTCAATATAACATTGTCAAG+GGG 0.515102 1_1:+81416540 None:intergenic
TCCTCTTGCCACCTCTAGTA+GGG 0.516437 1_1:+81417748 None:intergenic
ATCCTCTTGCCACCTCTAGT+AGG 0.517018 1_1:+81417747 None:intergenic
CAACTGATCCAATGTCTGGC+AGG 0.519919 1_1:-81417476 Msa0048070:CDS
GTGAACTATAATCCTCAAAA+GGG 0.521076 1_1:+81413561 None:intergenic
TCAAGAAGAGCCAATGAACA+TGG 0.521309 1_1:-81413799 Msa0048070:CDS
AAACGATTCAAGAAAGTATG+AGG 0.521767 1_1:-81418451 Msa0048070:CDS
TCTCGCCTGAGGATGAAGTT+GGG 0.522592 1_1:-81417824 Msa0048070:CDS
CTGGTGAACCTTGAGGAAAC+CGG 0.523333 1_1:+81413665 None:intergenic
TGTCAAAACCTGGGTGCCCT+TGG 0.523499 1_1:+81414405 None:intergenic
TGCTAAGAGGTAACACGTAA+AGG 0.525661 1_1:-81413432 Msa0048070:three_prime_UTR
CGCTCCCTGTTAAACTGCAC+CGG 0.525962 1_1:+81418107 None:intergenic
ATTCAATATAACATTGTCAA+GGG 0.526458 1_1:+81416539 None:intergenic
TAGTTATTGGAATGGCACAC+AGG 0.527186 1_1:-81417920 Msa0048070:CDS
AAGAGGTTTGGGCTTGAAGG+AGG 0.528991 1_1:-81418008 Msa0048070:CDS
TTTGTTTCTTATAGATGCAG+AGG 0.529321 1_1:-81413832 Msa0048070:intron
CCAAGTGGCTCCGTCAGACT+GGG 0.529941 1_1:-81415461 Msa0048070:CDS
GAGGTTTGGGCTTGAAGGAG+GGG 0.530105 1_1:-81418006 Msa0048070:CDS
TGCTCTTCCAAATTACACTA+CGG 0.531954 1_1:-81417541 Msa0048070:CDS
ACATCAGATTTGCATGAGAA+AGG 0.532115 1_1:+81413490 None:intergenic
CTCGACAACGGAACCGCACG+CGG 0.532228 1_1:+81418629 None:intergenic
TCAGGTTAATGGACATATGA+AGG 0.533272 1_1:-81418405 Msa0048070:CDS
CGAATAGTGTCGACGAGTCG+TGG 0.533477 1_1:-81418532 Msa0048070:CDS
CATCAGATGTTGCAATATGT+AGG 0.534486 1_1:-81414134 Msa0048070:CDS
TGGAAGAGCACTTAAATGCA+GGG 0.534895 1_1:+81417554 None:intergenic
GTGATGGCATGGTTTAGAGC+TGG 0.535681 1_1:-81418797 Msa0048070:CDS
ACGACTCGTCGACACTATTC+GGG 0.535768 1_1:+81418534 None:intergenic
TCCGTATATTATCCCTGAGA+TGG 0.536154 1_1:-81414704 Msa0048070:CDS
GACTGGGGAAGATATTGACT+GGG 0.537734 1_1:-81416703 Msa0048070:CDS
AGAGGTTTGGGCTTGAAGGA+GGG 0.538184 1_1:-81418007 Msa0048070:CDS
CTCGTTGGACAAGGTCATAT+GGG 0.539269 1_1:+81414091 None:intergenic
ATCGTTTGCCCCGATATCCC+AGG 0.539811 1_1:+81418467 None:intergenic
GAATTGAGGTGACCTTCTTG+TGG 0.539998 1_1:+81417048 None:intergenic
TGTGAAGACCTGCCAGACAT+TGG 0.541098 1_1:+81417468 None:intergenic
CACAGCCACCGGTTTCCTCA+AGG 0.541534 1_1:-81413673 Msa0048070:CDS
CTTTCCCGTATCCGAAACAC+TGG 0.542628 1_1:-81416933 Msa0048070:CDS
GGCAAGCGAGTACGTCGCCT+GGG 0.544093 1_1:-81418484 Msa0048070:CDS
GATTCAATATAACATTGTCA+AGG 0.544293 1_1:+81416538 None:intergenic
AGCGGAATAATTCAATCTTG+AGG 0.544965 1_1:+81413314 None:intergenic
GGAGTTGCAGAGGGCATGGG+AGG 0.547682 1_1:-81418561 Msa0048070:CDS
GAACCTGAGAGGAAGAAAAT+GGG 0.548148 1_1:+81419047 None:intergenic
TTCCCTGTTTGTCAAAACCT+GGG 0.548343 1_1:+81414396 None:intergenic
TAAGAACCTGCTTCGTAGCA+AGG 0.550469 1_1:-81414462 Msa0048070:CDS
GGATGAAGTTGGGCTTTACA+CGG 0.551441 1_1:-81417814 Msa0048070:CDS
CCACCTGCCTCCTTAGAACA+TGG 0.553759 1_1:+81414608 None:intergenic
GATATCGTTTAAGTTCTCGT+TGG 0.554131 1_1:+81414076 None:intergenic
TGGCTTCTGGTGAGGCCAAG+TGG 0.554411 1_1:-81415476 Msa0048070:CDS
GACAAGTAGTGTGTATTTGG+AGG 0.556088 1_1:-81418582 Msa0048070:CDS
CCCAAATTATCAATGAATTG+GGG 0.556416 1_1:+81415553 None:intergenic
ATCTTGCACTTGAATGCTCA+GGG 0.557444 1_1:+81415400 None:intergenic
TCAAACATTTCTTTCATACC+AGG 0.558338 1_1:+81417972 None:intergenic
CTTCCATGAAAGCTGTAGGT+AGG 0.559172 1_1:-81413743 Msa0048070:CDS
GTGCGCAAATGATCGAGACT+GGG 0.559355 1_1:-81416719 Msa0048070:CDS
AGATTTCAAGAGTTGAAGGA+TGG 0.560764 1_1:+81417126 None:intergenic
CGCGTGCGGTTCCGTTGTCG+AGG 0.560888 1_1:-81418628 Msa0048070:CDS
TTTCCTCAAGGTTCACCAGA+AGG 0.565126 1_1:-81413661 Msa0048070:CDS
AGTTATTGGAATGGCACACA+GGG 0.567045 1_1:-81417919 Msa0048070:CDS
ATTACTCGAATGACGTGGAC+AGG 0.567582 1_1:-81417644 Msa0048070:CDS
CCTCATGGTTATGATGGCCA+GGG 0.569032 1_1:-81415423 Msa0048070:CDS
GTCGTGAGGCTATATTTGAT+AGG 0.571464 1_1:-81418085 Msa0048070:CDS
AGCGCCGGATCCAAATCATC+CGG 0.571987 1_1:+81418344 None:intergenic
GGTAACCATGTTCGATTGAG+TGG 0.574620 1_1:-81416639 Msa0048070:CDS
GCTCTTCCAAATTACACTAC+GGG 0.575397 1_1:-81417540 Msa0048070:CDS
GCTCCTTCTGGTGAACCTTG+AGG 0.576637 1_1:+81413658 None:intergenic
GGTGGCAAATCCTAGTCACT+TGG 0.578223 1_1:-81417712 Msa0048070:CDS
TGAGAGCATAGTTATTGGAA+TGG 0.578672 1_1:-81417928 Msa0048070:CDS
TTAGGGGACATTACAATGAG+AGG 0.578673 1_1:+81414482 None:intergenic
TGGTGATGTTAAGTATCACT+TGG 0.579584 1_1:-81417787 Msa0048070:CDS
TTTGATGATGTCAAATATGT+CGG 0.580984 1_1:-81413714 Msa0048070:CDS
GTTTAAGTTCTCGTTGGACA+AGG 0.583232 1_1:+81414082 None:intergenic
ATGAAAGCTGTAGGTAGGGG+TGG 0.584716 1_1:-81413738 Msa0048070:CDS
GAATAGTGTCGACGAGTCGT+GGG 0.584961 1_1:-81418531 Msa0048070:CDS
TTTAGTACTCTGCTCTGGAA+AGG 0.586116 1_1:-81414309 Msa0048070:intron
CCTGACCACTCAATCGAACA+TGG 0.586704 1_1:+81416634 None:intergenic
ATACAGAATTGAAGTGGTAG+CGG 0.589550 1_1:+81413296 None:intergenic
TCCATGAAAGCTGTAGGTAG+GGG 0.590615 1_1:-81413741 Msa0048070:CDS
TCAGAGTTCGATGATGTCCA+AGG 0.593375 1_1:-81414422 Msa0048070:CDS
GTATCTTCCATGAAAGCTGT+AGG 0.594308 1_1:-81413747 Msa0048070:CDS
CTTTCATGGAAGATACAAGT+CGG 0.594828 1_1:+81413754 None:intergenic
AAATGACCACTCCACTGTTG+AGG 0.595043 1_1:-81414345 Msa0048070:CDS
TAGTGAGGCAGATCTTGATA+GGG 0.596867 1_1:-81418312 Msa0048070:CDS
ATCCGTTGAATTTGGAAGCG+AGG 0.597931 1_1:-81418373 Msa0048070:CDS
TGACCACTCCACTGTTGAGG+AGG 0.598407 1_1:-81414342 Msa0048070:CDS
AGTGGTCAGGATGTTGAAAG+AGG 0.599644 1_1:-81416621 Msa0048070:CDS
TCACCGTTAACATGAAAGAT+GGG 0.601123 1_1:+81417411 None:intergenic
CTTCCAAATTACACTACGGG+TGG 0.601598 1_1:-81417537 Msa0048070:CDS
GATACCGGATGATTTGGATC+CGG 0.602867 1_1:-81418348 Msa0048070:CDS
GATGAAGTTGGGCTTTACAC+GGG 0.605217 1_1:-81417813 Msa0048070:CDS
CCTGTGAACTTGCTGCTGAG+TGG 0.605537 1_1:-81417365 Msa0048070:CDS
TCACTAAACCCATAAAGCGC+CGG 0.606162 1_1:+81418329 None:intergenic
CACCTCATAAAGCAGTGAAG+AGG 0.606288 1_1:-81416755 Msa0048070:CDS
TCTTATGATCGCCCTACTAG+AGG 0.609821 1_1:-81417759 Msa0048070:CDS
TAGTTCATGATCAGACAACT+GGG 0.611191 1_1:-81416575 Msa0048070:CDS
TCGACAGCTTCCAAGTGACT+AGG 0.611819 1_1:+81417702 None:intergenic
ATGGTTACCTTCAACAAGCA+AGG 0.619170 1_1:+81416653 None:intergenic
TGGACAAGGTCATATGGGAA+AGG 0.619691 1_1:+81414096 None:intergenic
TGATCGAGCATCTGATCTTG+GGG 0.623223 1_1:-81417952 Msa0048070:CDS
CAGTGGTGGTCTCTCGCCTG+AGG 0.623475 1_1:-81417835 Msa0048070:CDS
TCATGTTAACGGTGATGATG+TGG 0.625055 1_1:-81417403 Msa0048070:CDS
GACCACTCCACTGTTGAGGA+GGG 0.627014 1_1:-81414341 Msa0048070:CDS
GGCGCTTTATGGGTTTAGTG+AGG 0.627119 1_1:-81418327 Msa0048070:CDS
GCTACGAAGCAGGTTCTTAG+GGG 0.627165 1_1:+81414466 None:intergenic
CCAAGTGGACTTCCGCGAAG+AGG 0.627224 1_1:-81418025 Msa0048070:CDS
CATTGACAAGATCCACAAGA+AGG 0.629884 1_1:-81417060 Msa0048070:CDS
TGCCTCGCTTCCAAATTCAA+CGG 0.630076 1_1:+81418371 None:intergenic
GAAGAGTTGGATCCATCTCA+GGG 0.632583 1_1:+81414692 None:intergenic
CAGAGTTCGATGATGTCCAA+GGG 0.633322 1_1:-81414421 Msa0048070:CDS
TATTGACTGGGGATTTGGAG+AGG 0.633889 1_1:-81416691 Msa0048070:CDS
AGATGTTGCAATATGTAGGG+TGG 0.634338 1_1:-81414130 Msa0048070:CDS
GAAGAGCCAATGAACATGGG+TGG 0.634696 1_1:-81413795 Msa0048070:CDS
ATCAGATGTTGCAATATGTA+GGG 0.635704 1_1:-81414133 Msa0048070:CDS
GTTTAACAGGGAGCGTCGTG+AGG 0.635821 1_1:-81418099 Msa0048070:CDS
TACCCTCCTCAACAGTGGAG+TGG 0.637674 1_1:+81414339 None:intergenic
CCAAACGTTCCATTCAGACG+TGG 0.644387 1_1:-81417340 Msa0048070:CDS
TCTAATACCCTCCTCAACAG+TGG 0.645218 1_1:+81414334 None:intergenic
GTATTTGGAGGAGTTGCAGA+GGG 0.646321 1_1:-81418570 Msa0048070:CDS
ACACAACTAGCCCAGTCTGA+CGG 0.646703 1_1:+81415451 None:intergenic
TGGAACGAACCCTAATCGCG+TGG 0.647252 1_1:+81419077 None:intergenic
GGTGATGTTAAGTATCACTT+GGG 0.647417 1_1:-81417786 Msa0048070:CDS
CAATCTATACAGAATTGAAG+TGG 0.648307 1_1:+81413290 None:intergenic
TACACCGGTGCAGTTTAACA+GGG 0.648874 1_1:-81418111 Msa0048070:CDS
TATGATCGCCCTACTAGAGG+TGG 0.649161 1_1:-81417756 Msa0048070:CDS
GATGATGTCCAAGGGCACCC+AGG 0.652311 1_1:-81414413 Msa0048070:CDS
GTACGTCGCCTGGGATATCG+GGG 0.657497 1_1:-81418475 Msa0048070:CDS
CAAGAAGAGCCAATGAACAT+GGG 0.658371 1_1:-81413798 Msa0048070:CDS
GCCCTACTAGAGGTGGCAAG+AGG 0.660787 1_1:-81417749 Msa0048070:CDS
ATTCTGTATAGATTGTCCCA+AGG 0.662484 1_1:-81413282 Msa0048070:three_prime_UTR
TCAATATAACATTGTCAAGG+GGG 0.667578 1_1:+81416541 None:intergenic
CTGTCTGTTAACCTCGACAA+CGG 0.669174 1_1:+81418617 None:intergenic
TGCGCAAATGATCGAGACTG+GGG 0.673199 1_1:-81416718 Msa0048070:CDS
TAAAATTGAGACACCTACAC+CGG 0.674366 1_1:-81418126 Msa0048070:CDS
TGTATTTGGAGGAGTTGCAG+AGG 0.677458 1_1:-81418571 Msa0048070:CDS
ATTTGAAGAACGAACCTGAG+AGG 0.683533 1_1:+81419036 None:intergenic
TCACAAAAGATCTGACGCAG+CGG 0.697014 1_1:+81417861 None:intergenic
GCAGTATTACTCGAATGACG+TGG 0.697771 1_1:-81417649 Msa0048070:CDS
GTGAACCTTGAGGAAACCGG+TGG 0.698324 1_1:+81413668 None:intergenic
TTCATGGAAGATACAAGTCG+GGG 0.698980 1_1:+81413756 None:intergenic
GATCATGAACTATTGAGTGA+CGG 0.702406 1_1:+81416586 None:intergenic
CCCTGGCCATCATAACCATG+AGG 0.709376 1_1:+81415423 None:intergenic
TTTCCCGTATCCGAAACACT+GGG 0.709868 1_1:-81416932 Msa0048070:intron
CTAATCGCGTGGAAGCGAAG+CGG 0.723368 1_1:+81419088 None:intergenic
ACTGGGGAAGATATTGACTG+GGG 0.730295 1_1:-81416702 Msa0048070:CDS
ATGGTTCGTCAATCTCATTG+TGG 0.731978 1_1:+81417286 None:intergenic
AGTTCATGATCAGACAACTG+GGG 0.754271 1_1:-81416574 Msa0048070:CDS
GTTATTGGAATGGCACACAG+GGG 0.766418 1_1:-81417918 Msa0048070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTAATAATTGAATTTTTA+CGG - chr1_1:81413527-81413546 Msa0048070:three_prime_UTR 10.0%
!! TGAAAAATAGTAATTAATAA+AGG + chr1_1:81416134-81416153 None:intergenic 10.0%
!! TTTCACTAGAAAAATTTAAT+TGG + chr1_1:81416196-81416215 None:intergenic 15.0%
!! TTAATAGTGTAGAAAAATAT+TGG - chr1_1:81416218-81416237 Msa0048070:intron 15.0%
!! TAATAGTGTAGAAAAATATT+GGG - chr1_1:81416219-81416238 Msa0048070:intron 15.0%
!!! ATTATTTTACAATTAGTTTG+TGG - chr1_1:81417659-81417678 Msa0048070:CDS 15.0%
!! ACAATTTATTGAAAAACTAT+TGG + chr1_1:81418491-81418510 None:intergenic 15.0%
!!! ATAAATTGTTTTAACTTGTA+AGG - chr1_1:81418502-81418521 Msa0048070:CDS 15.0%
!!! GATTTGTTTAAATTTACATA+AGG - chr1_1:81418897-81418916 Msa0048070:intron 15.0%
!! AAATTAAGAGATTTAATCGA+TGG + chr1_1:81413423-81413442 None:intergenic 20.0%
!!! TTTTGTTAAGATTTTAGTGA+TGG - chr1_1:81413620-81413639 Msa0048070:CDS 20.0%
!!! AATTTCTTTAGGAATTTTGT+TGG - chr1_1:81413927-81413946 Msa0048070:intron 20.0%
!!! ATTTCTTTAGGAATTTTGTT+GGG - chr1_1:81413928-81413947 Msa0048070:intron 20.0%
!!! GAAAAGCATAATAAACAAAA+CGG + chr1_1:81415204-81415223 None:intergenic 20.0%
!!! AAATTCTTCATTTAGAATTG+AGG + chr1_1:81415402-81415421 None:intergenic 20.0%
!! ATTCAATATAACATTGTCAA+GGG + chr1_1:81415897-81415916 None:intergenic 20.0%
!! TACATTTCATAATATTAGCT+AGG - chr1_1:81416243-81416262 Msa0048070:intron 20.0%
!!! ATTTCTTTAGAAAAATGACA+TGG + chr1_1:81416455-81416474 None:intergenic 20.0%
!!! TTTTCTAAAGAAATCAGTAT+TGG - chr1_1:81416461-81416480 Msa0048070:intron 20.0%
!!! GTCTTTGAAATTTATTTGTA+TGG - chr1_1:81417607-81417626 Msa0048070:CDS 20.0%
!! AGAGGATAAGATAAAAAATA+AGG + chr1_1:81417893-81417912 None:intergenic 20.0%
!!! TATTAACTAGTTTTTATACC+AGG - chr1_1:81418178-81418197 Msa0048070:CDS 20.0%
!!! ATTAACTAGTTTTTATACCA+GGG - chr1_1:81418179-81418198 Msa0048070:CDS 20.0%
!! AAAACTAAAAGATACATACT+TGG + chr1_1:81418382-81418401 None:intergenic 20.0%
!! AAAAGGAAAAATATGTAAGA+CGG + chr1_1:81418576-81418595 None:intergenic 20.0%
!! TATACTTTGTAATCTTGAAA+TGG - chr1_1:81419067-81419086 Msa0048070:five_prime_UTR 20.0%
! AGATTTATGATTGTCGAAAA+TGG + chr1_1:81413290-81413309 None:intergenic 25.0%
!! AGAATTTTACCATCTACAAA+TGG - chr1_1:81413735-81413754 Msa0048070:CDS 25.0%
!!! TTAACAGACAGTTTTTTAGA+TGG - chr1_1:81413828-81413847 Msa0048070:intron 25.0%
!!! TAACAGACAGTTTTTTAGAT+GGG - chr1_1:81413829-81413848 Msa0048070:intron 25.0%
! GTTTGAGTATATGCATATTT+CGG - chr1_1:81414256-81414275 Msa0048070:intron 25.0%
!!! TTCGTTGTTTGAGAATTTTT+TGG - chr1_1:81414382-81414401 Msa0048070:CDS 25.0%
! ATTGTTTAACACAATGTGAA+TGG + chr1_1:81414924-81414943 None:intergenic 25.0%
! AATTAGATTTGCAACTTTGT+TGG - chr1_1:81415263-81415282 Msa0048070:intron 25.0%
! CAACTTTGTTGGATTAATAT+AGG - chr1_1:81415274-81415293 Msa0048070:intron 25.0%
! TTCAATATAACATTGTCAAG+GGG + chr1_1:81415896-81415915 None:intergenic 25.0%
! GATTCAATATAACATTGTCA+AGG + chr1_1:81415898-81415917 None:intergenic 25.0%
! GTTTCTAACTATTCTATGAT+CGG - chr1_1:81415981-81416000 Msa0048070:intron 25.0%
! GAAACAATATAGCTGTAAAT+AGG + chr1_1:81416090-81416109 None:intergenic 25.0%
! CATAATATTAGCTAGGAAAT+TGG - chr1_1:81416250-81416269 Msa0048070:intron 25.0%
! AATAATATCGTAACAGATCT+TGG - chr1_1:81416273-81416292 Msa0048070:intron 25.0%
!!! ATAGTTGATGGTATACAAAA+AGG + chr1_1:81416547-81416566 None:intergenic 25.0%
! TACTTGTATTGAACAAATGA+TGG - chr1_1:81416753-81416772 Msa0048070:CDS 25.0%
! TCCCAAATTATCAATGAATT+GGG + chr1_1:81416884-81416903 None:intergenic 25.0%
! TTCCCAAATTATCAATGAAT+TGG + chr1_1:81416885-81416904 None:intergenic 25.0%
!! AATTTGGAGATTTTGCTAAT+GGG - chr1_1:81416909-81416928 Msa0048070:intron 25.0%
! TGTGATATTTGACAATTTCT+TGG - chr1_1:81416937-81416956 Msa0048070:CDS 25.0%
! ATTCAACATGGATAAAAATG+AGG + chr1_1:81417177-81417196 None:intergenic 25.0%
! ATCAATCAACAAATTCAACA+TGG + chr1_1:81417189-81417208 None:intergenic 25.0%
!! TTTGTTGATTGATGATATTG+AGG - chr1_1:81417196-81417215 Msa0048070:intron 25.0%
! CTCTGAATTCTATTTATATC+TGG - chr1_1:81417236-81417255 Msa0048070:intron 25.0%
! ATGTACCAATTTGAACTAAA+TGG - chr1_1:81417273-81417292 Msa0048070:CDS 25.0%
! GACAAAATATTTGATCACTA+AGG + chr1_1:81417318-81417337 None:intergenic 25.0%
! ATGAAACATATATACATCTC+AGG + chr1_1:81417356-81417375 None:intergenic 25.0%
! ACTATGAGTAATAATGTCAA+TGG - chr1_1:81417432-81417451 Msa0048070:CDS 25.0%
!! ACTCATTCTCTCTAATTTTA+TGG - chr1_1:81417689-81417708 Msa0048070:CDS 25.0%
!! TAACTTGTAAGGATTAAAGA+TGG - chr1_1:81418513-81418532 Msa0048070:CDS 25.0%
!! TTTTAATCCTTTCAACTTCA+TGG - chr1_1:81418546-81418565 Msa0048070:CDS 25.0%
! ATAAGAAACAAAACAGGAAA+AGG + chr1_1:81418593-81418612 None:intergenic 25.0%
!!! TTTGATGATGTCAAATATGT+CGG - chr1_1:81418719-81418738 Msa0048070:CDS 25.0%
!! TTTGTAAAGCTTTTCAGAAT+GGG + chr1_1:81418847-81418866 None:intergenic 25.0%
!! ATTTGTAAAGCTTTTCAGAA+TGG + chr1_1:81418848-81418867 None:intergenic 25.0%
! CAAAAAAGTGAAAACATCAA+AGG + chr1_1:81419041-81419060 None:intergenic 25.0%
! TTTGTAATCTTGAAATGGAT+TGG - chr1_1:81419072-81419091 Msa0048070:five_prime_UTR 25.0%
! TTGAGGGAAAAATGATTTAT+TGG + chr1_1:81419105-81419124 None:intergenic 25.0%
!! TTAAGATTTTAGTGATGGCA+TGG - chr1_1:81413625-81413644 Msa0048070:CDS 30.0%
! TGAAGATCTGTTTTGTGAAA+TGG + chr1_1:81413694-81413713 None:intergenic 30.0%
CTTCATCATATCTTGTATCT+AGG - chr1_1:81413709-81413728 Msa0048070:CDS 30.0%
AACTTTCTACCATTTGTAGA+TGG + chr1_1:81413747-81413766 None:intergenic 30.0%
! AAACGATTCAAGAAAGTATG+AGG - chr1_1:81413982-81414001 Msa0048070:intron 30.0%
!!! TCTTGATAGGGAGTTTTTTT+TGG - chr1_1:81414133-81414152 Msa0048070:CDS 30.0%
!!! CTTGATAGGGAGTTTTTTTT+GGG - chr1_1:81414134-81414153 Msa0048070:CDS 30.0%
TCAAACATTTCTTTCATACC+AGG + chr1_1:81414464-81414483 None:intergenic 30.0%
TGATAGATTTCAAGAGTTGA+AGG + chr1_1:81415314-81415333 None:intergenic 30.0%
! AATCTATCAGAAGAAGCTTT+TGG - chr1_1:81415325-81415344 Msa0048070:intron 30.0%
ACATTCCAAAAAGAAGAGAT+TGG - chr1_1:81415438-81415457 Msa0048070:CDS 30.0%
! TATCGTATGTCTGAAATACT+TGG - chr1_1:81415579-81415598 Msa0048070:CDS 30.0%
!! CAGAGATTTTGAAAACTGTT+GGG - chr1_1:81415624-81415643 Msa0048070:intron 30.0%
! TATGAGGTGTGAAATTTTCA+GGG + chr1_1:81415667-81415686 None:intergenic 30.0%
! TTATGAGGTGTGAAATTTTC+AGG + chr1_1:81415668-81415687 None:intergenic 30.0%
TCAATATAACATTGTCAAGG+GGG + chr1_1:81415895-81415914 None:intergenic 30.0%
ATATCTATCTTGTCTATGTC+AGG - chr1_1:81415959-81415978 Msa0048070:intron 30.0%
AGCTTATATCTAAGGAAATC+AGG + chr1_1:81416010-81416029 None:intergenic 30.0%
GAATGCATGATAACTGTTTA+GGG + chr1_1:81416112-81416131 None:intergenic 30.0%
!! TGCAATTCATTAAGTTTTGG+AGG + chr1_1:81416372-81416391 None:intergenic 30.0%
! CGATGCAATTCATTAAGTTT+TGG + chr1_1:81416375-81416394 None:intergenic 30.0%
TCGTTAATATGATCTGCATT+TGG - chr1_1:81416392-81416411 Msa0048070:intron 30.0%
AATATGATCTGCATTTGGAA+CGG - chr1_1:81416397-81416416 Msa0048070:intron 30.0%
!!! TAATCGCAACTTGCTTTTTT+TGG - chr1_1:81416491-81416510 Msa0048070:intron 30.0%
ATACCATCAACTATTGTTGT+TGG - chr1_1:81416553-81416572 Msa0048070:CDS 30.0%
! TACCATCAACTATTGTTGTT+GGG - chr1_1:81416554-81416573 Msa0048070:CDS 30.0%
ACTGTTCTTTAAGTGTTACA+AGG - chr1_1:81416651-81416670 Msa0048070:CDS 30.0%
ATTTGAATTGGGTTACTCAA+TGG - chr1_1:81416853-81416872 Msa0048070:intron 30.0%
! ACCCCAATTCATTGATAATT+TGG - chr1_1:81416879-81416898 Msa0048070:intron 30.0%
CCCAAATTATCAATGAATTG+GGG + chr1_1:81416883-81416902 None:intergenic 30.0%
! CCCCAATTCATTGATAATTT+GGG - chr1_1:81416880-81416899 Msa0048070:intron 30.0%
! ATAATTTGGGAAGCACAATT+TGG - chr1_1:81416893-81416912 Msa0048070:intron 30.0%
! CAATTTGGAGATTTTGCTAA+TGG - chr1_1:81416908-81416927 Msa0048070:intron 30.0%
! ATTTGGAGATTTTGCTAATG+GGG - chr1_1:81416910-81416929 Msa0048070:intron 30.0%
GATATTGAGGACAAACAAAT+TGG - chr1_1:81417209-81417228 Msa0048070:intron 30.0%
! TTGAGCCATTTAGTTCAAAT+TGG + chr1_1:81417281-81417300 None:intergenic 30.0%
ATCTAAATTTCAGAGAAGTC+TGG + chr1_1:81417477-81417496 None:intergenic 30.0%
!! GACTTCTCTGAAATTTAGAT+TGG - chr1_1:81417477-81417496 Msa0048070:CDS 30.0%
! ACATTACAATGAGAGGTTTT+CGG + chr1_1:81417947-81417966 None:intergenic 30.0%
CTTAGAAAATATTGAAACCC+TGG + chr1_1:81418199-81418218 None:intergenic 30.0%
ATCAGATGTTGCAATATGTA+GGG - chr1_1:81418300-81418319 Msa0048070:CDS 30.0%
AATCTTACTACCTAACGAAA+AGG + chr1_1:81418436-81418455 None:intergenic 30.0%
GCATCTATAAGAAACAAAAC+AGG + chr1_1:81418599-81418618 None:intergenic 30.0%
! TTTGTTTCTTATAGATGCAG+AGG - chr1_1:81418601-81418620 Msa0048070:CDS 30.0%
! TTACAAATTCATCCCTTTTG+AGG - chr1_1:81418860-81418879 Msa0048070:intron 30.0%
GTGAACTATAATCCTCAAAA+GGG + chr1_1:81418875-81418894 None:intergenic 30.0%
AGTGAACTATAATCCTCAAA+AGG + chr1_1:81418876-81418895 None:intergenic 30.0%
CAATCTATACAGAATTGAAG+TGG + chr1_1:81419146-81419165 None:intergenic 30.0%
AGTCGTGGGATAATTTCTTT+AGG - chr1_1:81413916-81413935 Msa0048070:intron 35.0%
! AAGTATGAGGTTGTTGTTGA+TGG - chr1_1:81413995-81414014 Msa0048070:intron 35.0%
! TCAGGTTAATGGACATATGA+AGG - chr1_1:81414028-81414047 Msa0048070:intron 35.0%
!!! AGTTTTTTTTGGGTGTTTGG+AGG - chr1_1:81414144-81414163 Msa0048070:CDS 35.0%
! TGAGAAGTGTAATTGGCTTA+GGG - chr1_1:81414283-81414302 Msa0048070:intron 35.0%
TAAAATTGAGACACCTACAC+CGG - chr1_1:81414307-81414326 Msa0048070:intron 35.0%
! CTATATTTGATAGGCTTGCT+TGG - chr1_1:81414357-81414376 Msa0048070:CDS 35.0%
!!! AGAATTTTTTGGCTACCAAG+TGG - chr1_1:81414393-81414412 Msa0048070:CDS 35.0%
! TGAGAGCATAGTTATTGGAA+TGG - chr1_1:81414505-81414524 Msa0048070:CDS 35.0%
! AGGGGAAGATTGAATGTTTT+GGG - chr1_1:81414533-81414552 Msa0048070:intron 35.0%
!! ATGTTTTGGGTAATGTAGTC+CGG - chr1_1:81414546-81414565 Msa0048070:intron 35.0%
! TGGTGATGTTAAGTATCACT+TGG - chr1_1:81414646-81414665 Msa0048070:CDS 35.0%
GGTGATGTTAAGTATCACTT+GGG - chr1_1:81414647-81414666 Msa0048070:CDS 35.0%
CAAGAGGATACATTTGTCTT+TGG - chr1_1:81414700-81414719 Msa0048070:CDS 35.0%
! AACATGGGTATTTTGCTTCA+TGG - chr1_1:81414818-81414837 Msa0048070:intron 35.0%
TGCTCTTCCAAATTACACTA+CGG - chr1_1:81414892-81414911 Msa0048070:intron 35.0%
TTTACAACTGATCCAATGTC+TGG - chr1_1:81414953-81414972 Msa0048070:intron 35.0%
TCACCGTTAACATGAAAGAT+GGG + chr1_1:81415025-81415044 None:intergenic 35.0%
ATCACCGTTAACATGAAAGA+TGG + chr1_1:81415026-81415045 None:intergenic 35.0%
! ATTTTAGGCTGTGTGAAAGA+TGG + chr1_1:81415169-81415188 None:intergenic 35.0%
AGATTTCAAGAGTTGAAGGA+TGG + chr1_1:81415310-81415329 None:intergenic 35.0%
!! AGAAGAAGCTTTTGGAAACA+GGG - chr1_1:81415333-81415352 Msa0048070:intron 35.0%
! GATAGCCAATCTCTTCTTTT+TGG + chr1_1:81415446-81415465 None:intergenic 35.0%
ATTTACCATACCCAGTGTTT+CGG + chr1_1:81415514-81415533 None:intergenic 35.0%
! CCAACAGTTTTCAAAATCTC+TGG + chr1_1:81415626-81415645 None:intergenic 35.0%
!! CCAGAGATTTTGAAAACTGT+TGG - chr1_1:81415623-81415642 Msa0048070:intron 35.0%
GATCATGAACTATTGAGTGA+CGG + chr1_1:81415850-81415869 None:intergenic 35.0%
ATAGTTCATGATCAGACAAC+TGG - chr1_1:81415857-81415876 Msa0048070:intron 35.0%
TAGTTCATGATCAGACAACT+GGG - chr1_1:81415858-81415877 Msa0048070:intron 35.0%
AGATGTTTACTGTTAGCAAC+AGG - chr1_1:81415927-81415946 Msa0048070:intron 35.0%
GGATACAGAGCTTATATCTA+AGG + chr1_1:81416018-81416037 None:intergenic 35.0%
GGAATGCATGATAACTGTTT+AGG + chr1_1:81416113-81416132 None:intergenic 35.0%
ATCTAATTCCTAACCTTTCG+CGG + chr1_1:81416309-81416328 None:intergenic 35.0%
! ATATGATCTGCATTTGGAAC+GGG - chr1_1:81416398-81416417 Msa0048070:intron 35.0%
TACCCAACAACAATAGTTGA+TGG + chr1_1:81416559-81416578 None:intergenic 35.0%
CTTTAAGTGTTACAAGGTCT+TGG - chr1_1:81416657-81416676 Msa0048070:CDS 35.0%
TAATCTTGTCATGCAGAAGA+AGG + chr1_1:81416694-81416713 None:intergenic 35.0%
TGCTGTTCTTGGATTTGAAT+TGG - chr1_1:81416841-81416860 Msa0048070:intron 35.0%
GCTGTTCTTGGATTTGAATT+GGG - chr1_1:81416842-81416861 Msa0048070:intron 35.0%
TTTGACAATTTCTTGGCTTC+TGG - chr1_1:81416944-81416963 Msa0048070:CDS 35.0%
CGACTAACAATAGCCAAATT+CGG + chr1_1:81417153-81417172 None:intergenic 35.0%
ATATATACATCTCAGGAGTC+AGG + chr1_1:81417349-81417368 None:intergenic 35.0%
TATGCGTAATTGCAATAGCT+TGG - chr1_1:81417406-81417425 Msa0048070:CDS 35.0%
ATGCGTAATTGCAATAGCTT+GGG - chr1_1:81417407-81417426 Msa0048070:CDS 35.0%
! CTCTCTAATTTTATGGCAGA+TGG - chr1_1:81417696-81417715 Msa0048070:CDS 35.0%
TCCATCTCAGGGATAATATA+CGG + chr1_1:81417733-81417752 None:intergenic 35.0%
CCTTAGAACATGGAAAAAGT+TGG + chr1_1:81417818-81417837 None:intergenic 35.0%
!! CCAACTTTTTCCATGTTCTA+AGG - chr1_1:81417815-81417834 Msa0048070:CDS 35.0%
!!! ACTTTTTCCATGTTCTAAGG+AGG - chr1_1:81417818-81417837 Msa0048070:CDS 35.0%
!! ACAATTAATGGGTTTGGTGT+TGG - chr1_1:81417850-81417869 Msa0048070:CDS 35.0%
TCTGCAAGAACAAAAACAAG+AGG + chr1_1:81417911-81417930 None:intergenic 35.0%
!! TTTTATGAGGCGCTTAAATC+TGG + chr1_1:81418063-81418082 None:intergenic 35.0%
CTAGTTAATATGAAGACAGC+TGG + chr1_1:81418168-81418187 None:intergenic 35.0%
! ACTTGATGATCATCGATCTA+AGG - chr1_1:81418270-81418289 Msa0048070:CDS 35.0%
CATCAGATGTTGCAATATGT+AGG - chr1_1:81418299-81418318 Msa0048070:CDS 35.0%
! GATATCGTTTAAGTTCTCGT+TGG + chr1_1:81418360-81418379 None:intergenic 35.0%
!! GACAGAGCTCTAAAAATACA+TGG + chr1_1:81418414-81418433 None:intergenic 35.0%
TTATAGATGCAGAGGTTGTT+TGG - chr1_1:81418609-81418628 Msa0048070:CDS 35.0%
TTTCATGGAAGATACAAGTC+GGG + chr1_1:81418681-81418700 None:intergenic 35.0%
CTTTCATGGAAGATACAAGT+CGG + chr1_1:81418682-81418701 None:intergenic 35.0%
ACATCAGATTTGCATGAGAA+AGG + chr1_1:81418946-81418965 None:intergenic 35.0%
!!! AGTTTTGTTTCGTTGCTAAG+AGG - chr1_1:81418988-81419007 Msa0048070:intron 35.0%
GCGGAATAATTCAATCTTGA+GGG + chr1_1:81419121-81419140 None:intergenic 35.0%
AGCGGAATAATTCAATCTTG+AGG + chr1_1:81419122-81419141 None:intergenic 35.0%
ATACAGAATTGAAGTGGTAG+CGG + chr1_1:81419140-81419159 None:intergenic 35.0%
ATTCTGTATAGATTGTCCCA+AGG - chr1_1:81419151-81419170 Msa0048070:five_prime_UTR 35.0%
GGAAGAAAATGGGAGAAAGA+TGG + chr1_1:81413379-81413398 None:intergenic 40.0%
GAACCTGAGAGGAAGAAAAT+GGG + chr1_1:81413389-81413408 None:intergenic 40.0%
ATTTGAAGAACGAACCTGAG+AGG + chr1_1:81413400-81413419 None:intergenic 40.0%
TGGGACAAGTAGTGTGTATT+TGG - chr1_1:81413848-81413867 Msa0048070:intron 40.0%
GACAAGTAGTGTGTATTTGG+AGG - chr1_1:81413851-81413870 Msa0048070:intron 40.0%
!! TGAGGTTGTTGTTGATGGTT+AGG - chr1_1:81414000-81414019 Msa0048070:intron 40.0%
!! GAGGTTGTTGTTGATGGTTA+GGG - chr1_1:81414001-81414020 Msa0048070:intron 40.0%
GTTAGGGCTTATCAGGTTAA+TGG - chr1_1:81414017-81414036 Msa0048070:intron 40.0%
GAAGTTGGATCCGTTGAATT+TGG - chr1_1:81414052-81414071 Msa0048070:intron 40.0%
TTAGTGAGGCAGATCTTGAT+AGG - chr1_1:81414120-81414139 Msa0048070:CDS 40.0%
TAGTGAGGCAGATCTTGATA+GGG - chr1_1:81414121-81414140 Msa0048070:CDS 40.0%
!!! GGGAGTTTTTTTTGGGTGTT+TGG - chr1_1:81414141-81414160 Msa0048070:CDS 40.0%
!!! TTTTTTGGGTGTTTGGAGGA+TGG - chr1_1:81414148-81414167 Msa0048070:CDS 40.0%
!!! CGGGTTTTTTGTCTGAGAAT+AGG - chr1_1:81414171-81414190 Msa0048070:CDS 40.0%
!! AGGCTTATTGTGGGAGTATT+GGG - chr1_1:81414234-81414253 Msa0048070:intron 40.0%
! GTGAGAAGTGTAATTGGCTT+AGG - chr1_1:81414282-81414301 Msa0048070:intron 40.0%
GTCGTGAGGCTATATTTGAT+AGG - chr1_1:81414348-81414367 Msa0048070:CDS 40.0%
TTTGATCGAGCATCTGATCT+TGG - chr1_1:81414479-81414498 Msa0048070:CDS 40.0%
TTGATCGAGCATCTGATCTT+GGG - chr1_1:81414480-81414499 Msa0048070:CDS 40.0%
TAGTTATTGGAATGGCACAC+AGG - chr1_1:81414513-81414532 Msa0048070:intron 40.0%
AGTTATTGGAATGGCACACA+GGG - chr1_1:81414514-81414533 Msa0048070:intron 40.0%
! CAGGGGAAGATTGAATGTTT+TGG - chr1_1:81414532-81414551 Msa0048070:intron 40.0%
! CAGATCTTTTGTGAGTTCAG+TGG - chr1_1:81414581-81414600 Msa0048070:intron 40.0%
! ATCTTTTGTGAGTTCAGTGG+TGG - chr1_1:81414584-81414603 Msa0048070:intron 40.0%
GAGGATACATTTGTCTTTGG+TGG - chr1_1:81414703-81414722 Msa0048070:CDS 40.0%
! TCGAGTTTTCCCAACAACAA+CGG + chr1_1:81414759-81414778 None:intergenic 40.0%
GTGGACAGGACAAAAAACAT+GGG - chr1_1:81414803-81414822 Msa0048070:intron 40.0%
! GGTATTTTGCTTCATGGAGA+TGG - chr1_1:81414824-81414843 Msa0048070:intron 40.0%
!! TGGAAGAGCACTTAAATGCA+GGG + chr1_1:81414882-81414901 None:intergenic 40.0%
!! TTGGAAGAGCACTTAAATGC+AGG + chr1_1:81414883-81414902 None:intergenic 40.0%
GCTCTTCCAAATTACACTAC+GGG - chr1_1:81414893-81414912 Msa0048070:intron 40.0%
GCTCCCATCTTTCATGTTAA+CGG - chr1_1:81415019-81415038 Msa0048070:intron 40.0%
! TCATGTTAACGGTGATGATG+TGG - chr1_1:81415030-81415049 Msa0048070:intron 40.0%
! TTGGTGTGTTATCGTCGATT+TGG - chr1_1:81415124-81415143 Msa0048070:intron 40.0%
ATGGTTCGTCAATCTCATTG+TGG + chr1_1:81415150-81415169 None:intergenic 40.0%
CACACAGCCTAAAATGTACA+AGG - chr1_1:81415174-81415193 Msa0048070:intron 40.0%
! CGGCTAACCTTGTACATTTT+AGG + chr1_1:81415184-81415203 None:intergenic 40.0%
!! CAGAAGAAGCTTTTGGAAAC+AGG - chr1_1:81415332-81415351 Msa0048070:intron 40.0%
!! GAAGAAGCTTTTGGAAACAG+GGG - chr1_1:81415334-81415353 Msa0048070:intron 40.0%
CATTGACAAGATCCACAAGA+AGG - chr1_1:81415373-81415392 Msa0048070:intron 40.0%
ATCCTCTTCACTGCTTTATG+AGG + chr1_1:81415683-81415702 None:intergenic 40.0%
! GAAGATATTGACTGGGGATT+TGG - chr1_1:81415737-81415756 Msa0048070:intron 40.0%
! TTTGCTACCTTGCTTGTTGA+AGG - chr1_1:81415773-81415792 Msa0048070:intron 40.0%
ATGGTTACCTTCAACAAGCA+AGG + chr1_1:81415783-81415802 None:intergenic 40.0%
AGTTCATGATCAGACAACTG+GGG - chr1_1:81415859-81415878 Msa0048070:intron 40.0%
!! CTTTCAGAGTTTGCTGTTCT+TGG - chr1_1:81416830-81416849 Msa0048070:intron 40.0%
TTGCTTCCTCATGGTTATGA+TGG - chr1_1:81417004-81417023 Msa0048070:CDS 40.0%
ATCTTGCACTTGAATGCTCA+GGG + chr1_1:81417036-81417055 None:intergenic 40.0%
AATCTTGCACTTGAATGCTC+AGG + chr1_1:81417037-81417056 None:intergenic 40.0%
TGAGCATTCAAGTGCAAGAT+TGG - chr1_1:81417036-81417055 Msa0048070:CDS 40.0%
AAGATTGGAACGCTTTCTTC+AGG - chr1_1:81417051-81417070 Msa0048070:CDS 40.0%
CTGAATCAGTTTGCCGAATT+TGG - chr1_1:81417137-81417156 Msa0048070:CDS 40.0%
! TTTCAGAGAAGTCTGGTTTC+AGG + chr1_1:81417470-81417489 None:intergenic 40.0%
TTCCAGAGTAAGTATCAGGA+TGG + chr1_1:81417555-81417574 None:intergenic 40.0%
TTCAAAGACAGACAAAGCAG+TGG + chr1_1:81417596-81417615 None:intergenic 40.0%
TCCGTATATTATCCCTGAGA+TGG - chr1_1:81417729-81417748 Msa0048070:CDS 40.0%
TGAATCTGTTTCCGAAGAGT+TGG + chr1_1:81417757-81417776 None:intergenic 40.0%
AACTCTTCGGAAACAGATTC+AGG - chr1_1:81417756-81417775 Msa0048070:CDS 40.0%
AGAACATGGAAAAAGTTGGC+AGG + chr1_1:81417814-81417833 None:intergenic 40.0%
!! GTGGGTACAATTAATGGGTT+TGG - chr1_1:81417844-81417863 Msa0048070:CDS 40.0%
TTAGGGGACATTACAATGAG+AGG + chr1_1:81417954-81417973 None:intergenic 40.0%
TTCCCTGTTTGTCAAAACCT+GGG + chr1_1:81418040-81418059 None:intergenic 40.0%
! GGTCATTTCGGTCTTTTATG+AGG + chr1_1:81418076-81418095 None:intergenic 40.0%
!! TTTAGTACTCTGCTCTGGAA+AGG - chr1_1:81418124-81418143 Msa0048070:CDS 40.0%
!! TATGAAGACAGCTGGTTCTA+TGG + chr1_1:81418160-81418179 None:intergenic 40.0%
TAAAACCAACTATCTCCTGC+AGG - chr1_1:81418237-81418256 Msa0048070:CDS 40.0%
AGATGTTGCAATATGTAGGG+TGG - chr1_1:81418303-81418322 Msa0048070:CDS 40.0%
! GTTTAAGTTCTCGTTGGACA+AGG + chr1_1:81418354-81418373 None:intergenic 40.0%
TCAAGAAGAGCCAATGAACA+TGG - chr1_1:81418634-81418653 Msa0048070:CDS 40.0%
CAAGAAGAGCCAATGAACAT+GGG - chr1_1:81418635-81418654 Msa0048070:CDS 40.0%
TTCATGGAAGATACAAGTCG+GGG + chr1_1:81418680-81418699 None:intergenic 40.0%
GTATCTTCCATGAAAGCTGT+AGG - chr1_1:81418686-81418705 Msa0048070:CDS 40.0%
TTCCATGAAAGCTGTAGGTA+GGG - chr1_1:81418691-81418710 Msa0048070:CDS 40.0%
TTTCAGAATGGGAAGTTGAC+TGG + chr1_1:81418836-81418855 None:intergenic 40.0%
TGCTAAGAGGTAACACGTAA+AGG - chr1_1:81419001-81419020 Msa0048070:intron 40.0%
! TCTCCCATTTTCTTCCTCTC+AGG - chr1_1:81413383-81413402 Msa0048070:three_prime_UTR 45.0%
CGAACCTGAGAGGAAGAAAA+TGG + chr1_1:81413390-81413409 None:intergenic 45.0%
! TTTTAAGCAGCAAGCTGCAC+CGG - chr1_1:81413779-81413798 Msa0048070:CDS 45.0%
CTGTCTGTTAACCTCGACAA+CGG + chr1_1:81413819-81413838 None:intergenic 45.0%
TGTATTTGGAGGAGTTGCAG+AGG - chr1_1:81413862-81413881 Msa0048070:intron 45.0%
GTATTTGGAGGAGTTGCAGA+GGG - chr1_1:81413863-81413882 Msa0048070:intron 45.0%
!! GTTGATGGTTAGGGCTTATC+AGG - chr1_1:81414010-81414029 Msa0048070:intron 45.0%
TGGACATATGAAGGCGAAGT+TGG - chr1_1:81414037-81414056 Msa0048070:intron 45.0%
ATCCGTTGAATTTGGAAGCG+AGG - chr1_1:81414060-81414079 Msa0048070:intron 45.0%
TGCCTCGCTTCCAAATTCAA+CGG + chr1_1:81414065-81414084 None:intergenic 45.0%
! GATACCGGATGATTTGGATC+CGG - chr1_1:81414085-81414104 Msa0048070:CDS 45.0%
ATTTGGATCCGGCGCTTTAT+GGG - chr1_1:81414096-81414115 Msa0048070:CDS 45.0%
TCACTAAACCCATAAAGCGC+CGG + chr1_1:81414107-81414126 None:intergenic 45.0%
! CAGGCTTATTGTGGGAGTAT+TGG - chr1_1:81414233-81414252 Msa0048070:intron 45.0%
! CGGATCGTGAGAAGTGTAAT+TGG - chr1_1:81414276-81414295 Msa0048070:intron 45.0%
TACACCGGTGCAGTTTAACA+GGG - chr1_1:81414322-81414341 Msa0048070:CDS 45.0%
TGATCGAGCATCTGATCTTG+GGG - chr1_1:81414481-81414500 Msa0048070:CDS 45.0%
! GGGGTTGAGAGCATAGTTAT+TGG - chr1_1:81414500-81414519 Msa0048070:CDS 45.0%
GTTATTGGAATGGCACACAG+GGG - chr1_1:81414515-81414534 Msa0048070:intron 45.0%
TCACAAAAGATCTGACGCAG+CGG + chr1_1:81414575-81414594 None:intergenic 45.0%
TAAAGCCCAACTTCATCCTC+AGG + chr1_1:81414617-81414636 None:intergenic 45.0%
GGATGAAGTTGGGCTTTACA+CGG - chr1_1:81414619-81414638 Msa0048070:CDS 45.0%
GATGAAGTTGGGCTTTACAC+GGG - chr1_1:81414620-81414639 Msa0048070:CDS 45.0%
TCTTATGATCGCCCTACTAG+AGG - chr1_1:81414674-81414693 Msa0048070:CDS 45.0%
! GAGTTTTCCCAACAACAACG+GGG + chr1_1:81414757-81414776 None:intergenic 45.0%
! CGAGTTTTCCCAACAACAAC+GGG + chr1_1:81414758-81414777 None:intergenic 45.0%
GCAGTATTACTCGAATGACG+TGG - chr1_1:81414784-81414803 Msa0048070:intron 45.0%
ATTACTCGAATGACGTGGAC+AGG - chr1_1:81414789-81414808 Msa0048070:intron 45.0%
CGTGGACAGGACAAAAAACA+TGG - chr1_1:81414802-81414821 Msa0048070:intron 45.0%
!! CATGGAGATGGTAGTTTTGC+TGG - chr1_1:81414836-81414855 Msa0048070:intron 45.0%
!! AGATGGTAGTTTTGCTGGAC+AGG - chr1_1:81414841-81414860 Msa0048070:intron 45.0%
!! GATGGTAGTTTTGCTGGACA+GGG - chr1_1:81414842-81414861 Msa0048070:intron 45.0%
CTTCCAAATTACACTACGGG+TGG - chr1_1:81414896-81414915 Msa0048070:intron 45.0%
GTTCCACCCGTAGTGTAATT+TGG + chr1_1:81414902-81414921 None:intergenic 45.0%
GAATTGAGGTGACCTTCTTG+TGG + chr1_1:81415388-81415407 None:intergenic 45.0%
! GAGATTGGCTATCAGCATAC+TGG - chr1_1:81415453-81415472 Msa0048070:CDS 45.0%
TTTCCCGTATCCGAAACACT+GGG - chr1_1:81415501-81415520 Msa0048070:CDS 45.0%
ATACCCAGTGTTTCGGATAC+GGG + chr1_1:81415507-81415526 None:intergenic 45.0%
CATACCCAGTGTTTCGGATA+CGG + chr1_1:81415508-81415527 None:intergenic 45.0%
! TCTCTGGTTTCACGCTGAAT+GGG + chr1_1:81415610-81415629 None:intergenic 45.0%
! ATCTCTGGTTTCACGCTGAA+TGG + chr1_1:81415611-81415630 None:intergenic 45.0%
CACCTCATAAAGCAGTGAAG+AGG - chr1_1:81415678-81415697 Msa0048070:intron 45.0%
AGACTGGGGAAGATATTGAC+TGG - chr1_1:81415729-81415748 Msa0048070:intron 45.0%
! GACTGGGGAAGATATTGACT+GGG - chr1_1:81415730-81415749 Msa0048070:intron 45.0%
! ACTGGGGAAGATATTGACTG+GGG - chr1_1:81415731-81415750 Msa0048070:intron 45.0%
! TATTGACTGGGGATTTGGAG+AGG - chr1_1:81415742-81415761 Msa0048070:intron 45.0%
GGTAACCATGTTCGATTGAG+TGG - chr1_1:81415794-81415813 Msa0048070:intron 45.0%
AGTGGTCAGGATGTTGAAAG+AGG - chr1_1:81415812-81415831 Msa0048070:intron 45.0%
ATCCTGTCCTTGCTTGTCTT+TGG - chr1_1:81416034-81416053 Msa0048070:intron 45.0%
TCCTGTCCTTGCTTGTCTTT+GGG - chr1_1:81416035-81416054 Msa0048070:intron 45.0%
GTCAAACCCAAAGACAAGCA+AGG + chr1_1:81416044-81416063 None:intergenic 45.0%
! TGGCATTTTCGTGCTTTCTC+TGG - chr1_1:81416511-81416530 Msa0048070:CDS 45.0%
ATGTATGACAAAGTGCACGC+TGG + chr1_1:81416624-81416643 None:intergenic 45.0%
CAATTTCTTGGCTTCTGGTG+AGG - chr1_1:81416949-81416968 Msa0048070:CDS 45.0%
!! CTAGTTGTGTTGCTTCCTCA+TGG - chr1_1:81416995-81417014 Msa0048070:CDS 45.0%
! AAACTGATTCAGCCAGAAGG+GGG + chr1_1:81417129-81417148 None:intergenic 45.0%
! CAAACTGATTCAGCCAGAAG+GGG + chr1_1:81417130-81417149 None:intergenic 45.0%
! GCAAACTGATTCAGCCAGAA+GGG + chr1_1:81417131-81417150 None:intergenic 45.0%
TGCCATCCTGATACTTACTC+TGG - chr1_1:81417550-81417569 Msa0048070:CDS 45.0%
GCAGTTCCAGAGTAAGTATC+AGG + chr1_1:81417559-81417578 None:intergenic 45.0%
GAAGAGTTGGATCCATCTCA+GGG + chr1_1:81417744-81417763 None:intergenic 45.0%
CTGAGATGGATCCAACTCTT+CGG - chr1_1:81417743-81417762 Msa0048070:CDS 45.0%
!! TTTCCATGTTCTAAGGAGGC+AGG - chr1_1:81417822-81417841 Msa0048070:CDS 45.0%
AGGCAGGTGGGTACAATTAA+TGG - chr1_1:81417838-81417857 Msa0048070:CDS 45.0%
GGCAGGTGGGTACAATTAAT+GGG - chr1_1:81417839-81417858 Msa0048070:CDS 45.0%
TGCTACGAAGCAGGTTCTTA+GGG + chr1_1:81417971-81417990 None:intergenic 45.0%
TTGCTACGAAGCAGGTTCTT+AGG + chr1_1:81417972-81417991 None:intergenic 45.0%
TAAGAACCTGCTTCGTAGCA+AGG - chr1_1:81417971-81417990 Msa0048070:CDS 45.0%
GGACATCATCGAACTCTGAT+AGG + chr1_1:81418010-81418029 None:intergenic 45.0%
TCAGAGTTCGATGATGTCCA+AGG - chr1_1:81418011-81418030 Msa0048070:CDS 45.0%
CAGAGTTCGATGATGTCCAA+GGG - chr1_1:81418012-81418031 Msa0048070:CDS 45.0%
!! CACCCAGGTTTTGACAAACA+GGG - chr1_1:81418035-81418054 Msa0048070:CDS 45.0%
GTTCCCTGTTTGTCAAAACC+TGG + chr1_1:81418041-81418060 None:intergenic 45.0%
CAACAGTGGAGTGGTCATTT+CGG + chr1_1:81418088-81418107 None:intergenic 45.0%
AAATGACCACTCCACTGTTG+AGG - chr1_1:81418088-81418107 Msa0048070:CDS 45.0%
TCTAATACCCTCCTCAACAG+TGG + chr1_1:81418102-81418121 None:intergenic 45.0%
AGACGTTTAGTACTCTGCTC+TGG - chr1_1:81418119-81418138 Msa0048070:CDS 45.0%
GTAAACCTGCAGGAGATAGT+TGG + chr1_1:81418245-81418264 None:intergenic 45.0%
TGGACAAGGTCATATGGGAA+AGG + chr1_1:81418340-81418359 None:intergenic 45.0%
CTCGTTGGACAAGGTCATAT+GGG + chr1_1:81418345-81418364 None:intergenic 45.0%
TCTCGTTGGACAAGGTCATA+TGG + chr1_1:81418346-81418365 None:intergenic 45.0%
! AGAGCTCTGTCCTTTTCGTT+AGG - chr1_1:81418423-81418442 Msa0048070:CDS 45.0%
CGGATAGCCATGAAGTTGAA+AGG + chr1_1:81418556-81418575 None:intergenic 45.0%
GTGTATCCACCCATGTTCAT+TGG + chr1_1:81418647-81418666 None:intergenic 45.0%
CTTCCATGAAAGCTGTAGGT+AGG - chr1_1:81418690-81418709 Msa0048070:CDS 45.0%
TCCATGAAAGCTGTAGGTAG+GGG - chr1_1:81418692-81418711 Msa0048070:CDS 45.0%
TTTCCTCAAGGTTCACCAGA+AGG - chr1_1:81418772-81418791 Msa0048070:CDS 45.0%
! GTGATGGCATGGTTTAGAGC+TGG - chr1_1:81413636-81413655 Msa0048070:CDS 50.0%
ACGACTCGTCGACACTATTC+GGG + chr1_1:81413902-81413921 None:intergenic 50.0%
CACGACTCGTCGACACTATT+CGG + chr1_1:81413903-81413922 None:intergenic 50.0%
!! GAATAGTGTCGACGAGTCGT+GGG - chr1_1:81413902-81413921 Msa0048070:intron 50.0%
TTTGGAAGCGAGGCAGATAC+CGG - chr1_1:81414070-81414089 Msa0048070:intron 50.0%
GAGGCAGATACCGGATGATT+TGG - chr1_1:81414079-81414098 Msa0048070:CDS 50.0%
GATTTGGATCCGGCGCTTTA+TGG - chr1_1:81414095-81414114 Msa0048070:CDS 50.0%
GGCGCTTTATGGGTTTAGTG+AGG - chr1_1:81414106-81414125 Msa0048070:CDS 50.0%
TTTGGGTGTTTGGAGGATGG+CGG - chr1_1:81414151-81414170 Msa0048070:CDS 50.0%
ATAGGCCTGTTCAGACGCTT+AGG - chr1_1:81414189-81414208 Msa0048070:intron 50.0%
ATCGACCTAAGCGTCTGAAC+AGG + chr1_1:81414197-81414216 None:intergenic 50.0%
!! CGCTTAGGTCGATTTTGACG+AGG - chr1_1:81414204-81414223 Msa0048070:intron 50.0%
!! GATTTTGACGAGGCTTGAGC+AGG - chr1_1:81414214-81414233 Msa0048070:intron 50.0%
AGGCTTGAGCAGGCTTATTG+TGG - chr1_1:81414224-81414243 Msa0048070:intron 50.0%
GGCTTGAGCAGGCTTATTGT+GGG - chr1_1:81414225-81414244 Msa0048070:intron 50.0%
! CTGTTAAACTGCACCGGTGT+AGG + chr1_1:81414323-81414342 None:intergenic 50.0%
CTACACCGGTGCAGTTTAAC+AGG - chr1_1:81414321-81414340 Msa0048070:CDS 50.0%
TTCAAGCCCAAACCTCTTCG+CGG + chr1_1:81414423-81414442 None:intergenic 50.0%
AAGAGGTTTGGGCTTGAAGG+AGG - chr1_1:81414425-81414444 Msa0048070:CDS 50.0%
AGAGGTTTGGGCTTGAAGGA+GGG - chr1_1:81414426-81414445 Msa0048070:CDS 50.0%
TCTCGCCTGAGGATGAAGTT+GGG - chr1_1:81414609-81414628 Msa0048070:intron 50.0%
TATGATCGCCCTACTAGAGG+TGG - chr1_1:81414677-81414696 Msa0048070:CDS 50.0%
TCCTCTTGCCACCTCTAGTA+GGG + chr1_1:81414688-81414707 None:intergenic 50.0%
ATCCTCTTGCCACCTCTAGT+AGG + chr1_1:81414689-81414708 None:intergenic 50.0%
GGTGGCAAATCCTAGTCACT+TGG - chr1_1:81414721-81414740 Msa0048070:CDS 50.0%
TCGACAGCTTCCAAGTGACT+AGG + chr1_1:81414734-81414753 None:intergenic 50.0%
!! TAGTTTTGCTGGACAGGGTG+TGG - chr1_1:81414847-81414866 Msa0048070:intron 50.0%
CAACTGATCCAATGTCTGGC+AGG - chr1_1:81414957-81414976 Msa0048070:intron 50.0%
TGTGAAGACCTGCCAGACAT+TGG + chr1_1:81414968-81414987 None:intergenic 50.0%
CCACGTCTGAATGGAACGTT+TGG + chr1_1:81415096-81415115 None:intergenic 50.0%
CCAAACGTTCCATTCAGACG+TGG - chr1_1:81415093-81415112 Msa0048070:intron 50.0%
GTTCCATTCAGACGTGGTTG+TGG - chr1_1:81415099-81415118 Msa0048070:intron 50.0%
AGTCCACAACCACGTCTGAA+TGG + chr1_1:81415105-81415124 None:intergenic 50.0%
TTCAGACGTGGTTGTGGACT+TGG - chr1_1:81415105-81415124 Msa0048070:intron 50.0%
! TGGCTATCAGCATACTGGCT+TGG - chr1_1:81415458-81415477 Msa0048070:CDS 50.0%
!! GGCTATCAGCATACTGGCTT+GGG - chr1_1:81415459-81415478 Msa0048070:CDS 50.0%
CTTTCCCGTATCCGAAACAC+TGG - chr1_1:81415500-81415519 Msa0048070:CDS 50.0%
CGTATCCGAAACACTGGGTA+TGG - chr1_1:81415506-81415525 Msa0048070:CDS 50.0%
! CTCTGGTTTCACGCTGAATG+GGG + chr1_1:81415609-81415628 None:intergenic 50.0%
GTGCGCAAATGATCGAGACT+GGG - chr1_1:81415714-81415733 Msa0048070:intron 50.0%
TGCGCAAATGATCGAGACTG+GGG - chr1_1:81415715-81415734 Msa0048070:intron 50.0%
CCTGACCACTCAATCGAACA+TGG + chr1_1:81415802-81415821 None:intergenic 50.0%
CCATGTTCGATTGAGTGGTC+AGG - chr1_1:81415799-81415818 Msa0048070:intron 50.0%
ACCCAAAGACAAGCAAGGAC+AGG + chr1_1:81416039-81416058 None:intergenic 50.0%
TGTGTTTGCCGCGAAAGGTT+AGG - chr1_1:81416298-81416317 Msa0048070:intron 50.0%
ACACAACTAGCCCAGTCTGA+CGG + chr1_1:81416985-81417004 None:intergenic 50.0%
TCCTCATGGTTATGATGGCC+AGG - chr1_1:81417009-81417028 Msa0048070:CDS 50.0%
CCTCATGGTTATGATGGCCA+GGG - chr1_1:81417010-81417029 Msa0048070:CDS 50.0%
! AAAAGCTTTTCCCCCCCTTC+TGG - chr1_1:81417114-81417133 Msa0048070:CDS 50.0%
! AACTGATTCAGCCAGAAGGG+GGG + chr1_1:81417128-81417147 None:intergenic 50.0%
! GGCAAACTGATTCAGCCAGA+AGG + chr1_1:81417132-81417151 None:intergenic 50.0%
CGAAGAGTTGGATCCATCTC+AGG + chr1_1:81417745-81417764 None:intergenic 50.0%
!! CATGTTCTAAGGAGGCAGGT+GGG - chr1_1:81417826-81417845 Msa0048070:CDS 50.0%
GCTACGAAGCAGGTTCTTAG+GGG + chr1_1:81417970-81417989 None:intergenic 50.0%
!! GCACCCAGGTTTTGACAAAC+AGG - chr1_1:81418034-81418053 Msa0048070:CDS 50.0%
!! TGCTCTGGAAAGGTGTGTGA+TGG - chr1_1:81418134-81418153 Msa0048070:CDS 50.0%
GAAGAGCCAATGAACATGGG+TGG - chr1_1:81418638-81418657 Msa0048070:CDS 50.0%
ACCCCTACCTACAGCTTTCA+TGG + chr1_1:81418696-81418715 None:intergenic 50.0%
ATGAAAGCTGTAGGTAGGGG+TGG - chr1_1:81418695-81418714 Msa0048070:CDS 50.0%
CTGGTGAACCTTGAGGAAAC+CGG + chr1_1:81418771-81418790 None:intergenic 50.0%
! CAATCTCAGCTTGCTCCTTC+TGG + chr1_1:81418790-81418809 None:intergenic 50.0%
CTAATCGCGTGGAAGCGAAG+CGG + chr1_1:81413348-81413367 None:intergenic 55.0%
GCTTCGCTTCCACGCGATTA+GGG - chr1_1:81413347-81413366 Msa0048070:three_prime_UTR 55.0%
TGGAACGAACCCTAATCGCG+TGG + chr1_1:81413359-81413378 None:intergenic 55.0%
!! CGAATAGTGTCGACGAGTCG+TGG - chr1_1:81413901-81413920 Msa0048070:intron 55.0%
GAGTACGTCGCCTGGGATAT+CGG - chr1_1:81413956-81413975 Msa0048070:intron 55.0%
AGTACGTCGCCTGGGATATC+GGG - chr1_1:81413957-81413976 Msa0048070:intron 55.0%
ATCGTTTGCCCCGATATCCC+AGG + chr1_1:81413969-81413988 None:intergenic 55.0%
! AGCGCCGGATCCAAATCATC+CGG + chr1_1:81414092-81414111 None:intergenic 55.0%
TTGGGTGTTTGGAGGATGGC+GGG - chr1_1:81414152-81414171 Msa0048070:CDS 55.0%
CGCTCCCTGTTAAACTGCAC+CGG + chr1_1:81414329-81414348 None:intergenic 55.0%
!! GTTTAACAGGGAGCGTCGTG+AGG - chr1_1:81414334-81414353 Msa0048070:CDS 55.0%
TGGACTTCCGCGAAGAGGTT+TGG - chr1_1:81414413-81414432 Msa0048070:CDS 55.0%
GGACTTCCGCGAAGAGGTTT+GGG - chr1_1:81414414-81414433 Msa0048070:CDS 55.0%
GCGAAGAGGTTTGGGCTTGA+AGG - chr1_1:81414422-81414441 Msa0048070:CDS 55.0%
GAGGTTTGGGCTTGAAGGAG+GGG - chr1_1:81414427-81414446 Msa0048070:CDS 55.0%
GGAGGGGAGACTCTTATTCC+TGG - chr1_1:81414443-81414462 Msa0048070:CDS 55.0%
CTCTCGCCTGAGGATGAAGT+TGG - chr1_1:81414608-81414627 Msa0048070:intron 55.0%
GTTGGGCTTTACACGGGAAC+TGG - chr1_1:81414626-81414645 Msa0048070:CDS 55.0%
! CTGTCGACCCCGTTGTTGTT+GGG - chr1_1:81414747-81414766 Msa0048070:intron 55.0%
CCACTCAGCAGCAAGTTCAC+AGG + chr1_1:81415071-81415090 None:intergenic 55.0%
!! CCTGTGAACTTGCTGCTGAG+TGG - chr1_1:81415068-81415087 Msa0048070:intron 55.0%
CGGATACGGGAAAGCTGTTC+AGG + chr1_1:81415494-81415513 None:intergenic 55.0%
CGTGCGCAAATGATCGAGAC+TGG - chr1_1:81415713-81415732 Msa0048070:intron 55.0%
TGGACTGTGTTTGCCGCGAA+AGG - chr1_1:81416293-81416312 Msa0048070:intron 55.0%
! GCACGCTGGAAGCATAGAAC+AGG + chr1_1:81416610-81416629 None:intergenic 55.0%
CCCTGGCCATCATAACCATG+AGG + chr1_1:81417013-81417032 None:intergenic 55.0%
! ACTGATTCAGCCAGAAGGGG+GGG + chr1_1:81417127-81417146 None:intergenic 55.0%
CCACCTGCCTCCTTAGAACA+TGG + chr1_1:81417828-81417847 None:intergenic 55.0%
!! CCATGTTCTAAGGAGGCAGG+TGG - chr1_1:81417825-81417844 Msa0048070:CDS 55.0%
TGCAAGCCTTGCTACGAAGC+AGG + chr1_1:81417980-81417999 None:intergenic 55.0%
TGTCAAAACCTGGGTGCCCT+TGG + chr1_1:81418031-81418050 None:intergenic 55.0%
TGACCACTCCACTGTTGAGG+AGG - chr1_1:81418091-81418110 Msa0048070:CDS 55.0%
GACCACTCCACTGTTGAGGA+GGG - chr1_1:81418092-81418111 Msa0048070:CDS 55.0%
TACCCTCCTCAACAGTGGAG+TGG + chr1_1:81418097-81418116 None:intergenic 55.0%
GTGAACCTTGAGGAAACCGG+TGG + chr1_1:81418768-81418787 None:intergenic 55.0%
GCTCCTTCTGGTGAACCTTG+AGG + chr1_1:81418778-81418797 None:intergenic 55.0%
!! GTTGACTGGCTCGCGTTGAA+GGG + chr1_1:81418822-81418841 None:intergenic 55.0%
!! AGTTGACTGGCTCGCGTTGA+AGG + chr1_1:81418823-81418842 None:intergenic 55.0%
CGCTTCGCTTCCACGCGATT+AGG - chr1_1:81413346-81413365 Msa0048070:three_prime_UTR 60.0%
TGGAGGAGTTGCAGAGGGCA+TGG - chr1_1:81413868-81413887 Msa0048070:intron 60.0%
! GGAGGAGTTGCAGAGGGCAT+GGG - chr1_1:81413869-81413888 Msa0048070:intron 60.0%
GTACGTCGCCTGGGATATCG+GGG - chr1_1:81413958-81413977 Msa0048070:intron 60.0%
CCTCTTCGCGGAAGTCCACT+TGG + chr1_1:81414411-81414430 None:intergenic 60.0%
! CCAAGTGGACTTCCGCGAAG+AGG - chr1_1:81414408-81414427 Msa0048070:CDS 60.0%
AGATCTGACGCAGCGGCTTC+CGG + chr1_1:81414568-81414587 None:intergenic 60.0%
GCCCTACTAGAGGTGGCAAG+AGG - chr1_1:81414684-81414703 Msa0048070:CDS 60.0%
GCTGTCGACCCCGTTGTTGT+TGG - chr1_1:81414746-81414765 Msa0048070:intron 60.0%
TGGCTTCTGGTGAGGCCAAG+TGG - chr1_1:81416957-81416976 Msa0048070:CDS 60.0%
CCAAGTGGCTCCGTCAGACT+GGG - chr1_1:81416972-81416991 Msa0048070:CDS 60.0%
CACTTGAATGCTCAGGGCCC+TGG + chr1_1:81417030-81417049 None:intergenic 60.0%
!! GATGATGTCCAAGGGCACCC+AGG - chr1_1:81418020-81418039 Msa0048070:CDS 60.0%
CTTGAGGAAACCGGTGGCTG+TGG + chr1_1:81418762-81418781 None:intergenic 60.0%
!! CACAGCCACCGGTTTCCTCA+AGG - chr1_1:81418760-81418779 Msa0048070:CDS 60.0%
AACGGAACCGCACGCGGAAC+CGG + chr1_1:81413801-81413820 None:intergenic 65.0%
CTCGACAACGGAACCGCACG+CGG + chr1_1:81413807-81413826 None:intergenic 65.0%
! GGAGTTGCAGAGGGCATGGG+AGG - chr1_1:81413872-81413891 Msa0048070:intron 65.0%
GGCAAGCGAGTACGTCGCCT+GGG - chr1_1:81413949-81413968 Msa0048070:intron 65.0%
CAGTGGTGGTCTCTCGCCTG+AGG - chr1_1:81414598-81414617 Msa0048070:intron 65.0%
GCCAAGTGGCTCCGTCAGAC+TGG - chr1_1:81416971-81416990 Msa0048070:CDS 65.0%
CCCAGTCTGACGGAGCCACT+TGG + chr1_1:81416975-81416994 None:intergenic 65.0%
CCATCTGCTGCCACAGCCAC+CGG - chr1_1:81418749-81418768 Msa0048070:CDS 65.0%
!! AGCTGCACCGGTTCCGCGTG+CGG - chr1_1:81413791-81413810 Msa0048070:CDS 70.0%
CGCGTGCGGTTCCGTTGTCG+AGG - chr1_1:81413805-81413824 Msa0048070:CDS 70.0%
GGGCAAGCGAGTACGTCGCC+TGG - chr1_1:81413948-81413967 Msa0048070:intron 70.0%
CCGGTGGCTGTGGCAGCAGA+TGG + chr1_1:81418752-81418771 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 81413268 81419187 81413268 ID=Msa0048070;Name=Msa0048070
chr1_1 mRNA 81413268 81419187 81413268 ID=Msa0048070-mRNA-1;Parent=Msa0048070;Name=Msa0048070-mRNA-1;_AED=0.03;_eAED=0.03;_QI=193|1|1|1|0.87|0.77|9|334|1023
chr1_1 exon 81413268 81413840 81413268 ID=Msa0048070-mRNA-1:exon:28068;Parent=Msa0048070-mRNA-1
chr1_1 exon 81414073 81414196 81414073 ID=Msa0048070-mRNA-1:exon:28067;Parent=Msa0048070-mRNA-1
chr1_1 exon 81414310 81414525 81414310 ID=Msa0048070-mRNA-1:exon:28066;Parent=Msa0048070-mRNA-1
chr1_1 exon 81414612 81414740 81414612 ID=Msa0048070-mRNA-1:exon:28065;Parent=Msa0048070-mRNA-1
chr1_1 exon 81415383 81415629 81415383 ID=Msa0048070-mRNA-1:exon:28064;Parent=Msa0048070-mRNA-1
chr1_1 exon 81416507 81416839 81416507 ID=Msa0048070-mRNA-1:exon:28063;Parent=Msa0048070-mRNA-1
chr1_1 exon 81416933 81417159 81416933 ID=Msa0048070-mRNA-1:exon:28062;Parent=Msa0048070-mRNA-1
chr1_1 exon 81417260 81418872 81417260 ID=Msa0048070-mRNA-1:exon:28061;Parent=Msa0048070-mRNA-1
chr1_1 exon 81419051 81419187 81419051 ID=Msa0048070-mRNA-1:exon:28060;Parent=Msa0048070-mRNA-1
chr1_1 five_prime_UTR 81419051 81419187 81419051 ID=Msa0048070-mRNA-1:five_prime_utr;Parent=Msa0048070-mRNA-1
chr1_1 five_prime_UTR 81418817 81418872 81418817 ID=Msa0048070-mRNA-1:five_prime_utr;Parent=Msa0048070-mRNA-1
chr1_1 CDS 81417260 81418816 81417260 ID=Msa0048070-mRNA-1:cds;Parent=Msa0048070-mRNA-1
chr1_1 CDS 81416933 81417159 81416933 ID=Msa0048070-mRNA-1:cds;Parent=Msa0048070-mRNA-1
chr1_1 CDS 81416507 81416839 81416507 ID=Msa0048070-mRNA-1:cds;Parent=Msa0048070-mRNA-1
chr1_1 CDS 81415383 81415629 81415383 ID=Msa0048070-mRNA-1:cds;Parent=Msa0048070-mRNA-1
chr1_1 CDS 81414612 81414740 81414612 ID=Msa0048070-mRNA-1:cds;Parent=Msa0048070-mRNA-1
chr1_1 CDS 81414310 81414525 81414310 ID=Msa0048070-mRNA-1:cds;Parent=Msa0048070-mRNA-1
chr1_1 CDS 81414073 81414196 81414073 ID=Msa0048070-mRNA-1:cds;Parent=Msa0048070-mRNA-1
chr1_1 CDS 81413602 81413840 81413602 ID=Msa0048070-mRNA-1:cds;Parent=Msa0048070-mRNA-1
chr1_1 three_prime_UTR 81413268 81413601 81413268 ID=Msa0048070-mRNA-1:three_prime_utr;Parent=Msa0048070-mRNA-1
Gene Sequence

>Msa0048070

ATGGCATGGTTTAGAGCTGGTGCTAGTATAGCAAAAAATGCTATAAAACGAACCATTTCACAAAACAGATCTTCATCATATCTTGTATCTAGGTCAAGAATTTTACCATCTACAAATGGTAGAAAGTTTCATACAACTGTTTTTAAGCAGCAAGCTGCACCGGTTCCGCGTGCGGTTCCGTTGTCGAGGTTAACAGACAGTTTTTTAGATGGGACAAGTAGTGTGTATTTGGAGGAGTTGCAGAGGGCATGGGAGGCTGACCCGAATAGTGTCGACGAGTCGTGGGATAATTTCTTTAGGAATTTTGTTGGGCAAGCGAGTACGTCGCCTGGGATATCGGGGCAAACGATTCAAGAAAGTATGAGGTTGTTGTTGATGGTTAGGGCTTATCAGGTTAATGGACATATGAAGGCGAAGTTGGATCCGTTGAATTTGGAAGCGAGGCAGATACCGGATGATTTGGATCCGGCGCTTTATGGGTTTAGTGAGGCAGATCTTGATAGGGAGTTTTTTTTGGGTGTTTGGAGGATGGCGGGTTTTTTGTCTGAGAATAGGCCTGTTCAGACGCTTAGGTCGATTTTGACGAGGCTTGAGCAGGCTTATTGTGGGAGTATTGGGTTTGAGTATATGCATATTTCGGATCGTGAGAAGTGTAATTGGCTTAGGGATAAAATTGAGACACCTACACCGGTGCAGTTTAACAGGGAGCGTCGTGAGGCTATATTTGATAGGCTTGCTTGGAGTTCGTTGTTTGAGAATTTTTTGGCTACCAAGTGGACTTCCGCGAAGAGGTTTGGGCTTGAAGGAGGGGAGACTCTTATTCCTGGTATGAAAGAAATGTTTGATCGAGCATCTGATCTTGGGGTTGAGAGCATAGTTATTGGAATGGCACACAGGGGAAGATTGAATGTTTTGGGTAATGTAGTCCGGAAGCCGCTGCGTCAGATCTTTTGTGAGTTCAGTGGTGGTCTCTCGCCTGAGGATGAAGTTGGGCTTTACACGGGAACTGGTGATGTTAAGTATCACTTGGGAACGTCTTATGATCGCCCTACTAGAGGTGGCAAGAGGATACATTTGTCTTTGGTGGCAAATCCTAGTCACTTGGAAGCTGTCGACCCCGTTGTTGTTGGGAAAACTCGAGCTAAGCAGTATTACTCGAATGACGTGGACAGGACAAAAAACATGGGTATTTTGCTTCATGGAGATGGTAGTTTTGCTGGACAGGGTGTGGTCTATGAAACCCTGCATTTAAGTGCTCTTCCAAATTACACTACGGGTGGAACCATTCACATTGTGTTAAACAATCAAGTTGCTTTTACAACTGATCCAATGTCTGGCAGGTCTTCACAGTATTGCACAGATGTTGCTAAAGCTTTAGATGCTCCCATCTTTCATGTTAACGGTGATGATGTGGAAGCAGTTGTACATGCCTGTGAACTTGCTGCTGAGTGGCGCCAAACGTTCCATTCAGACGTGGTTGTGGACTTGGTGTGTTATCGTCGATTTGGCCACAATGAGATTGACGAACCATCTTTCACACAGCCTAAAATGTACAAGGTCATCAGAAGCCATCCTTCAACTCTTGAAATCTATCAGAAGAAGCTTTTGGAAACAGGGGAGCTGACACAAGATGACATTGACAAGATCCACAAGAAGGTCACCTCAATTCTAAATGAAGAATTTCAAGCTAGCAAAGATTACATTCCAAAAAGAAGAGATTGGCTATCAGCATACTGGCTTGGGTTCAAGTCACCTGAACAGCTTTCCCGTATCCGAAACACTGGCGTGAAACCAGAGATTTTGAAAACTGTTGGGAAAGCAATCACAACTATCCCTGAAAATTTCACACCTCATAAAGCAGTGAAGAGGATTTATGAACAGCGTGCGCAAATGATCGAGACTGGGGAAGATATTGACTGGGGATTTGGAGAGGCACTTGCTTTTGCTACCTTGCTTGTTGAAGGTAACCATGTTCGATTGAGTGGTCAGGATGTTGAAAGAGGAACTTTTAGTCACCGTCACTCAATAGTTCATGATCAGACAACTGGGGAGAAATATTGCCCCCTTGACAATGTTATATTGAATCAAGATGAAGAGATGTTTACTGTTAGCAACAGCTCACTTTCAGAGTTTGCTGTTCTTGGATTTGAATTGGGTTACTCAATGGAAAACCCCAATTCATTGATAATTTGGGAAGCACAATTTGGAGATTTTGCTAATGGGGCTCATGTGATATTTGACAATTTCTTGGCTTCTGGTGAGGCCAAGTGGCTCCGTCAGACTGGGCTAGTTGTGTTGCTTCCTCATGGTTATGATGGCCAGGGCCCTGAGCATTCAAGTGCAAGATTGGAACGCTTTCTTCAGATGGCTGATGACAATCCGTATATTATCCCTGAGATGGATCCAACTCTTCGGAAACAGATTCAGGAGTGTAATTTGCAGATTGTGAATGTCACAACTCCTGCCAACTTTTTCCATGTTCTAAGGAGGCAGATACATAGAGAATTCCGAAAACCTCTCATTGTAATGTCCCCTAAGAACCTGCTTCGTAGCAAGGCTTGCAGATCAAACCTATCAGAGTTCGATGATGTCCAAGGGCACCCAGGTTTTGACAAACAGGGAACCAGATTTAAGCGCCTCATAAAAGACCGAAATGACCACTCCACTGTTGAGGAGGGTATTAGACGTTTAGTACTCTGCTCTGGAAAGGTTTACTATGAACTTGATGATCATCGATCTAAGGTTGATGCATCAGATGTTGCAATATGTAGGGTGGAACAGCTTTGTCCTTTCCCATATGACCTTGTCCAACGAGAACTTAAACGATATCCAAATGCAGAGGTTGTTTGGTGTCAAGAAGAGCCAATGAACATGGGTGGATACACTTACATTTTGCCCCGACTTGTATCTTCCATGAAAGCTGTAGGTAGGGGTGGTTTTGATGATGTCAAATATGTCGGTCGTGCTCCATCTGCTGCCACAGCCACCGGTTTCCTCAAGGTTCACCAGAAGGAGCAAGCTGAGATTGCTGAGAAAGCCCTTCAACGCGAGCCAGTCAACTTCCCATTCTGA
Protein sequence

>Msa0048070

MAWFRAGASIAKNAIKRTISQNRSSSYLVSRSRILPSTNGRKFHTTVFKQQAAPVPRAVPLSRLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQASTSPGISGQTIQESMRLLLMVRAYQVNGHMKAKLDPLNLEARQIPDDLDPALYGFSEADLDREFFLGVWRMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPVQFNRERREAIFDRLAWSSLFENFLATKWTSAKRFGLEGGETLIPGMKEMFDRASDLGVESIVIGMAHRGRLNVLGNVVRKPLRQIFCEFSGGLSPEDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSNDVDRTKNMGILLHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVLNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKVIRSHPSTLEIYQKKLLETGELTQDDIDKIHKKVTSILNEEFQASKDYIPKRRDWLSAYWLGFKSPEQLSRIRNTGVKPEILKTVGKAITTIPENFTPHKAVKRIYEQRAQMIETGEDIDWGFGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSIVHDQTTGEKYCPLDNVILNQDEEMFTVSNSSLSEFAVLGFELGYSMENPNSLIIWEAQFGDFANGAHVIFDNFLASGEAKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMADDNPYIIPEMDPTLRKQIQECNLQIVNVTTPANFFHVLRRQIHREFRKPLIVMSPKNLLRSKACRSNLSEFDDVQGHPGFDKQGTRFKRLIKDRNDHSTVEEGIRRLVLCSGKVYYELDDHRSKVDASDVAICRVEQLCPFPYDLVQRELKRYPNAEVVWCQEEPMNMGGYTYILPRLVSSMKAVGRGGFDDVKYVGRAPSAATATGFLKVHQKEQAEIAEKALQREPVNFPF*