Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049030 | AES99600.1 | 84.667 | 300 | 38 | 1 | 88 | 379 | 239 | 538 | 1.16e-159 | 480 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049030 | sp|Q8GT74|NIP2_ARATH | 64.667 | 150 | 53 | 0 | 379 | 528 | 89 | 238 | 3.29e-62 | 208 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049030 | G7K240 | 84.667 | 300 | 38 | 1 | 88 | 379 | 239 | 538 | 5.54e-160 | 480 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0049030 | Msa0049070 | 0.968196 | 2.465397e-128 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049030 | MtrunA17_Chr5g0437131 | 84.667 | 300 | 38 | 1 | 88 | 379 | 239 | 538 | 7.97e-163 | 481 |
Msa0049030 | MtrunA17_Chr8g0371291 | 78.667 | 150 | 25 | 1 | 379 | 528 | 80 | 222 | 3.68e-79 | 249 |
Msa0049030 | MtrunA17_Chr6g0480541 | 61.991 | 221 | 62 | 5 | 213 | 421 | 859 | 1069 | 1.55e-73 | 255 |
Msa0049030 | MtrunA17_Chr5g0406031 | 68.000 | 150 | 47 | 1 | 379 | 528 | 83 | 231 | 3.27e-65 | 213 |
Msa0049030 | MtrunA17_Chr6g0480481 | 52.174 | 161 | 33 | 2 | 227 | 379 | 9 | 133 | 1.71e-41 | 149 |
Msa0049030 | MtrunA17_Chr8g0369241 | 38.378 | 185 | 95 | 5 | 210 | 379 | 91 | 271 | 2.82e-24 | 108 |
Msa0049030 | MtrunA17_Chr4g0060981 | 35.443 | 158 | 86 | 4 | 379 | 528 | 67 | 216 | 1.32e-21 | 93.6 |
Msa0049030 | MtrunA17_Chr3g0126701 | 77.358 | 53 | 12 | 0 | 528 | 580 | 510 | 562 | 2.03e-20 | 95.9 |
Msa0049030 | MtrunA17_Chr5g0444161 | 33.333 | 132 | 66 | 6 | 408 | 528 | 107 | 227 | 9.63e-14 | 71.2 |
Msa0049030 | MtrunA17_Chr1g0147121 | 61.224 | 49 | 19 | 0 | 532 | 580 | 483 | 531 | 1.00e-13 | 74.7 |
Msa0049030 | MtrunA17_Chr5g0444141 | 33.333 | 123 | 78 | 3 | 408 | 528 | 142 | 262 | 1.96e-12 | 67.8 |
Msa0049030 | MtrunA17_Chr1g0210061 | 33.562 | 146 | 80 | 4 | 247 | 379 | 605 | 746 | 2.18e-12 | 70.1 |
Msa0049030 | MtrunA17_Chr8g0388231 | 43.421 | 76 | 42 | 1 | 457 | 532 | 309 | 383 | 3.65e-12 | 68.6 |
Msa0049030 | MtrunA17_Chr4g0067591 | 35.065 | 77 | 45 | 1 | 452 | 528 | 75 | 146 | 4.44e-12 | 67.0 |
Msa0049030 | MtrunA17_Chr6g0451031 | 48.889 | 45 | 23 | 0 | 484 | 528 | 67 | 111 | 4.44e-12 | 63.5 |
Msa0049030 | MtrunA17_Chr3g0128771 | 41.026 | 78 | 39 | 2 | 456 | 530 | 90 | 163 | 5.85e-12 | 64.7 |
Msa0049030 | MtrunA17_Chr7g0246761 | 32.558 | 129 | 64 | 5 | 406 | 528 | 21 | 132 | 6.34e-12 | 64.7 |
Msa0049030 | MtrunA17_Chr5g0411081 | 37.209 | 86 | 47 | 1 | 443 | 528 | 112 | 190 | 8.43e-12 | 67.0 |
Msa0049030 | MtrunA17_Chr8g0366561 | 43.243 | 74 | 41 | 1 | 457 | 530 | 114 | 186 | 1.14e-11 | 66.6 |
Msa0049030 | MtrunA17_Chr8g0369571 | 48.889 | 45 | 23 | 0 | 484 | 528 | 88 | 132 | 2.97e-11 | 62.8 |
Msa0049030 | MtrunA17_Chr5g0437361 | 37.209 | 86 | 53 | 1 | 450 | 535 | 68 | 152 | 4.55e-11 | 62.0 |
Msa0049030 | MtrunA17_Chr6g0451051 | 31.915 | 94 | 61 | 1 | 456 | 549 | 39 | 129 | 5.54e-11 | 61.2 |
Msa0049030 | MtrunA17_Chr6g0451041 | 42.188 | 64 | 37 | 0 | 486 | 549 | 18 | 81 | 7.91e-11 | 59.3 |
Msa0049030 | MtrunA17_Chr8g0383921 | 32.692 | 104 | 65 | 2 | 455 | 558 | 109 | 207 | 9.14e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049030 | AT2G40120.1 | 72.941 | 170 | 38 | 1 | 218 | 379 | 227 | 396 | 4.45e-77 | 255 |
Msa0049030 | AT1G73460.2 | 60.577 | 208 | 71 | 3 | 183 | 379 | 786 | 993 | 1.56e-70 | 247 |
Msa0049030 | AT1G73460.1 | 60.577 | 208 | 71 | 3 | 183 | 379 | 786 | 993 | 1.56e-70 | 247 |
Msa0049030 | AT1G73450.1 | 66.857 | 175 | 50 | 1 | 213 | 379 | 802 | 976 | 2.00e-70 | 246 |
Msa0049030 | AT3G17750.1 | 64.571 | 175 | 54 | 1 | 213 | 379 | 788 | 962 | 1.46e-66 | 235 |
Msa0049030 | AT2G17730.1 | 64.667 | 150 | 53 | 0 | 379 | 528 | 89 | 238 | 3.35e-63 | 208 |
Msa0049030 | AT4G35840.1 | 64.667 | 150 | 53 | 0 | 379 | 528 | 84 | 233 | 1.81e-62 | 206 |
Msa0049030 | AT5G66070.5 | 63.333 | 150 | 50 | 1 | 379 | 528 | 74 | 218 | 7.09e-59 | 196 |
Msa0049030 | AT5G66070.1 | 63.333 | 150 | 50 | 1 | 379 | 528 | 74 | 218 | 7.09e-59 | 196 |
Msa0049030 | AT2G17730.2 | 64.336 | 143 | 51 | 0 | 379 | 521 | 89 | 231 | 3.80e-58 | 195 |
Msa0049030 | AT4G35840.2 | 53.297 | 182 | 53 | 1 | 379 | 528 | 84 | 265 | 8.72e-56 | 189 |
Msa0049030 | AT5G66070.2 | 54.598 | 174 | 50 | 2 | 379 | 528 | 74 | 242 | 2.71e-53 | 182 |
Msa0049030 | AT5G66070.4 | 58.929 | 112 | 41 | 1 | 380 | 491 | 75 | 181 | 6.33e-36 | 133 |
Msa0049030 | AT5G66070.3 | 48.175 | 137 | 42 | 2 | 379 | 491 | 74 | 205 | 1.04e-28 | 114 |
Msa0049030 | AT1G74410.1 | 36.000 | 150 | 93 | 1 | 381 | 530 | 74 | 220 | 3.18e-24 | 101 |
Msa0049030 | AT5G35980.2 | 37.569 | 181 | 94 | 5 | 228 | 393 | 92 | 268 | 4.48e-23 | 104 |
Msa0049030 | AT5G35980.3 | 37.705 | 183 | 91 | 6 | 228 | 393 | 57 | 233 | 4.61e-23 | 104 |
Msa0049030 | AT5G35980.1 | 37.705 | 183 | 91 | 6 | 228 | 393 | 92 | 268 | 4.78e-23 | 104 |
Msa0049030 | AT3G20395.1 | 33.333 | 123 | 76 | 2 | 408 | 529 | 97 | 214 | 7.74e-16 | 77.4 |
Msa0049030 | AT3G18773.1 | 39.560 | 91 | 49 | 2 | 451 | 537 | 97 | 185 | 2.69e-13 | 70.1 |
Msa0049030 | AT5G53430.1 | 52.632 | 57 | 27 | 0 | 526 | 582 | 486 | 542 | 9.76e-13 | 72.0 |
Msa0049030 | AT1G49200.1 | 41.892 | 74 | 41 | 1 | 455 | 528 | 107 | 178 | 1.30e-12 | 68.2 |
Msa0049030 | AT2G17450.1 | 37.179 | 78 | 45 | 1 | 455 | 528 | 67 | 144 | 3.78e-12 | 65.9 |
Msa0049030 | AT5G05280.1 | 41.333 | 75 | 40 | 1 | 456 | 530 | 87 | 157 | 4.55e-12 | 65.5 |
Msa0049030 | AT4G27910.1 | 52.941 | 51 | 24 | 0 | 532 | 582 | 477 | 527 | 1.30e-11 | 68.2 |
Msa0049030 | AT5G17600.1 | 40.000 | 90 | 49 | 2 | 439 | 528 | 100 | 184 | 2.77e-11 | 65.9 |
Msa0049030 | AT1G49210.1 | 40.541 | 74 | 42 | 1 | 455 | 528 | 106 | 177 | 2.88e-11 | 63.9 |
Msa0049030 | AT5G01880.1 | 41.558 | 77 | 41 | 2 | 455 | 530 | 76 | 149 | 4.68e-11 | 62.0 |
Msa0049030 | AT3G16720.1 | 36.364 | 77 | 45 | 1 | 452 | 528 | 89 | 161 | 5.35e-11 | 64.3 |
Msa0049030 | AT2G27940.1 | 39.241 | 79 | 38 | 2 | 456 | 531 | 114 | 185 | 8.04e-11 | 63.2 |
Msa0049030 | AT5G53110.1 | 35.443 | 79 | 50 | 1 | 457 | 535 | 302 | 379 | 8.20e-11 | 64.7 |
Msa0049030 | AT5G10380.1 | 37.209 | 86 | 50 | 2 | 443 | 528 | 96 | 177 | 8.37e-11 | 63.9 |
Find 119 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTAGCTACCTTAATTTAA+AGG | 0.143063 | 1_2:+2183646 | Msa0049030:CDS |
CTTTGGCATTCGAATAATTC+TGG | 0.197162 | 1_2:+2184469 | Msa0049030:CDS |
CATAAATTCAACCAAGAATA+TGG | 0.227119 | 1_2:+2184292 | Msa0049030:CDS |
GCTTAATTTCCTTTAAATTA+AGG | 0.237843 | 1_2:-2183655 | None:intergenic |
ATGCTTCACCACCATATTCT+TGG | 0.272074 | 1_2:-2184303 | None:intergenic |
TTAAGGTAGCTAATGTTTAT+AGG | 0.288253 | 1_2:-2183638 | None:intergenic |
TGCTCACTGTCTCTGCATAA+TGG | 0.302576 | 1_2:-2184865 | None:intergenic |
ACAGAAAAGCAAGCACTTAA+TGG | 0.303631 | 1_2:+2184988 | Msa0049030:CDS |
TTCCTGTTCAATTTGCCTTC+AGG | 0.305106 | 1_2:+2184744 | Msa0049030:CDS |
TTGTATGTTCTATTGATCTT+TGG | 0.316674 | 1_2:+2184452 | Msa0049030:CDS |
CATTACTCGACAGTGTTTAG+AGG | 0.319594 | 1_2:+2184351 | Msa0049030:CDS |
GGTTAAACGTATGATGATAA+TGG | 0.326660 | 1_2:-2184801 | None:intergenic |
CATTCGAATAATTCTGGAAT+AGG | 0.333342 | 1_2:+2184475 | Msa0049030:CDS |
CACTTGTGATTGAGACTATT+GGG | 0.340792 | 1_2:-2184690 | None:intergenic |
GTTAAACGTATGATGATAAT+GGG | 0.346709 | 1_2:-2184800 | None:intergenic |
TAGCTTCGATCCGGAGGTTT+GGG | 0.350467 | 1_2:-2183380 | None:intergenic |
ATGCGCAATGGCTTCTTTCT+CGG | 0.367067 | 1_2:-2183555 | None:intergenic |
TCACTTGTGATTGAGACTAT+TGG | 0.368196 | 1_2:-2184691 | None:intergenic |
ATAGCTTCGATCCGGAGGTT+TGG | 0.378202 | 1_2:-2183381 | None:intergenic |
TTCTAACAGTCTCTCCCATT+TGG | 0.383802 | 1_2:-2184771 | None:intergenic |
GCTCACTGTCTCTGCATAAT+GGG | 0.397596 | 1_2:-2184864 | None:intergenic |
GCAATCTGAACTATGCTTCA+TGG | 0.399375 | 1_2:-2183738 | None:intergenic |
AGACAGAATTATGAGGCTTC+AGG | 0.401315 | 1_2:-2184414 | None:intergenic |
ATTGCAATATTTACATAACT+TGG | 0.409904 | 1_2:+2184375 | Msa0049030:CDS |
TAAGAAGCTTGATTTCATCT+AGG | 0.411237 | 1_2:-2184147 | None:intergenic |
TGCCTTCAGGATTTCCAAAT+GGG | 0.419108 | 1_2:+2184757 | Msa0049030:CDS |
GAGTGAAGAACTCCATGTTC+CGG | 0.421411 | 1_2:+2183853 | Msa0049030:CDS |
CGATCCGGAGGTTTGGGTAG+TGG | 0.425881 | 1_2:-2183374 | None:intergenic |
TTTCAACATATCTTTGACAT+TGG | 0.427382 | 1_2:+2184628 | Msa0049030:CDS |
GTTCAGCAGGTTCTTGTAGT+GGG | 0.431132 | 1_2:+2183612 | Msa0049030:CDS |
ATCCTGAAGGCAAATTGAAC+AGG | 0.433788 | 1_2:-2184746 | None:intergenic |
GTTGCTGCAGCAGCTCACGC+CGG | 0.436700 | 1_2:+2185701 | Msa0049030:intron |
GGATGTGACAGAGGCTTACT+AGG | 0.444182 | 1_2:+2184649 | Msa0049030:CDS |
GGCTTCTTTCTCGGCACTGA+GGG | 0.450284 | 1_2:-2183546 | None:intergenic |
TCTGGTGGTGCAGGAAGTGG+TGG | 0.450710 | 1_2:-2183452 | None:intergenic |
TATTTCAACAAACATGTAAT+GGG | 0.455848 | 1_2:-2183522 | None:intergenic |
TTATGACTATTTCTACCATC+AGG | 0.460782 | 1_2:+2184219 | Msa0049030:CDS |
TCTCCATCTGTGGCAGCCTC+CGG | 0.462617 | 1_2:-2183872 | None:intergenic |
TTGCTGCAGCAGCTCACGCC+GGG | 0.462792 | 1_2:+2185702 | Msa0049030:intron |
TTGCCTTCAGGATTTCCAAA+TGG | 0.467728 | 1_2:+2184756 | Msa0049030:CDS |
CTACAAGAACCTGCTGAACC+TGG | 0.473048 | 1_2:-2183608 | None:intergenic |
GTGTCTGGTGGTGCAGGAAG+TGG | 0.476291 | 1_2:-2183455 | None:intergenic |
TTGGGTAGTGGCGGCAGAGT+CGG | 0.481200 | 1_2:-2183362 | None:intergenic |
TAAGTTTGCACGCAGAAGTT+CGG | 0.485105 | 1_2:-2184260 | None:intergenic |
AAAAGCAGTCCAGGTTCAGC+AGG | 0.497375 | 1_2:+2183599 | Msa0049030:CDS |
CACTTAGTTGTGTGCAAGTG+TGG | 0.500438 | 1_2:+2184955 | Msa0049030:CDS |
CTGTGGCAGCCTCCGGAACA+TGG | 0.502526 | 1_2:-2183865 | None:intergenic |
GGTTCAGCAGGTTCTTGTAG+TGG | 0.505056 | 1_2:+2183611 | Msa0049030:CDS |
TTGCAATATTTACATAACTT+GGG | 0.506178 | 1_2:+2184376 | Msa0049030:CDS |
AGTATGTGGCGTTTATCTCC+CGG | 0.506715 | 1_2:-2184190 | None:intergenic |
GTTCCGGAGGCTGCCACAGA+TGG | 0.508408 | 1_2:+2183869 | Msa0049030:CDS |
ATCTTCTGATAGCTTCGATC+CGG | 0.508560 | 1_2:-2183389 | None:intergenic |
ATAGAGAAGACAGAATTATG+AGG | 0.508809 | 1_2:-2184421 | None:intergenic |
CACACAACTAAGTGTAGGCT+TGG | 0.511853 | 1_2:-2184946 | None:intergenic |
GTATTTCAACAAACATGTAA+TGG | 0.512226 | 1_2:-2183523 | None:intergenic |
CCATTGCTTTCAATCCCATT+CGG | 0.516665 | 1_2:-2183809 | None:intergenic |
ACCTACCTTGCATTGACAAG+TGG | 0.517649 | 1_2:+2184821 | Msa0049030:CDS |
ACCAGACACCGAAAATAGAT+TGG | 0.519369 | 1_2:+2183469 | Msa0049030:CDS |
GGAGTTCTTCACTCAAATAT+CGG | 0.520249 | 1_2:-2183844 | None:intergenic |
ATCTGTTTCAACAACTTCGA+TGG | 0.530198 | 1_2:-2183783 | None:intergenic |
GCCATTTGTTGATCATGCCC+CGG | 0.533576 | 1_2:-2185720 | None:intergenic |
TTGAAACAGATCTACCGAAT+GGG | 0.535513 | 1_2:+2183795 | Msa0049030:CDS |
TAAAGGAAATTAAGCTGAGT+CGG | 0.536864 | 1_2:+2183663 | Msa0049030:CDS |
GGTGGTGCAGGAAGTGGTGG+AGG | 0.539230 | 1_2:-2183449 | None:intergenic |
TCGGTTCAGCTACCTTCAGT+AGG | 0.540246 | 1_2:+2184065 | Msa0049030:CDS |
TTCTGATAGCTTCGATCCGG+AGG | 0.545370 | 1_2:-2183386 | None:intergenic |
GATTGTGCTGAACACGGTCA+TGG | 0.546919 | 1_2:+2184015 | Msa0049030:CDS |
GTGCATGGAAAGAATAGGAC+TGG | 0.553009 | 1_2:+2183968 | Msa0049030:CDS |
GCCGCCACTACCCAAACCTC+CGG | 0.562559 | 1_2:+2183370 | Msa0049030:CDS |
AACTTCAGAATTATGCGCAA+TGG | 0.563755 | 1_2:-2183567 | None:intergenic |
GTATGTGGCGTTTATCTCCC+GGG | 0.564712 | 1_2:-2184189 | None:intergenic |
TTCAGCAGGTTCTTGTAGTG+GGG | 0.568017 | 1_2:+2183613 | Msa0049030:CDS |
GTACAAGTCTCCCACTCACT+AGG | 0.571667 | 1_2:-2184531 | None:intergenic |
AGTCATAAAGACGCAGTATG+TGG | 0.573921 | 1_2:-2184204 | None:intergenic |
TGCAGGAAGTGGTGGAGGCA+AGG | 0.579538 | 1_2:-2183444 | None:intergenic |
GACAAGTGGCTCATCAAGCA+TGG | 0.579677 | 1_2:+2184835 | Msa0049030:CDS |
CTCCCATTTGGAAATCCTGA+AGG | 0.579740 | 1_2:-2184759 | None:intergenic |
GAATTGTGCATGGAAAGAAT+AGG | 0.580039 | 1_2:+2183963 | Msa0049030:CDS |
TTCAGTAGGGATGCTCTCGA+TGG | 0.583985 | 1_2:+2184079 | Msa0049030:CDS |
CGGTTCAGCTACCTTCAGTA+GGG | 0.590898 | 1_2:+2184066 | Msa0049030:CDS |
TGCTGCAGCAGCTCACGCCG+GGG | 0.593738 | 1_2:+2185703 | Msa0049030:intron |
GTTCAAAGTCAGATGGGTGC+AGG | 0.598923 | 1_2:+2184586 | Msa0049030:CDS |
AAAAGCAAGCACTTAATGGA+TGG | 0.599900 | 1_2:+2184992 | Msa0049030:CDS |
CAATGAATAAATGTTCCTGA+TGG | 0.601057 | 1_2:-2184234 | None:intergenic |
GAATGCTGTTCAAAGTCAGA+TGG | 0.601226 | 1_2:+2184579 | Msa0049030:CDS |
GGGATTGAAAGCAATGGAGT+AGG | 0.601533 | 1_2:+2183815 | Msa0049030:CDS |
TTATTACTAGCCTAGTGAGT+GGG | 0.602053 | 1_2:+2184521 | Msa0049030:CDS |
TGTGAATGTTTCGATAGTAG+TGG | 0.604151 | 1_2:-2183323 | None:intergenic |
GGTGAAATTCATCACAACAT+CGG | 0.604562 | 1_2:+2183490 | Msa0049030:CDS |
TCCGGAGGTTTGGGTAGTGG+CGG | 0.605445 | 1_2:-2183371 | None:intergenic |
ATGAGCCACTTGTCAATGCA+AGG | 0.605600 | 1_2:-2184826 | None:intergenic |
GTTGAAACAGATCTACCGAA+TGG | 0.607989 | 1_2:+2183794 | Msa0049030:CDS |
CCGAATGGGATTGAAAGCAA+TGG | 0.608264 | 1_2:+2183809 | Msa0049030:CDS |
TTTGACATTGGATGTGACAG+AGG | 0.609823 | 1_2:+2184640 | Msa0049030:CDS |
TTTGAGCTAAGAATTGTGCA+TGG | 0.611242 | 1_2:+2183953 | Msa0049030:CDS |
GACTGGATTTGAAGAAAACA+AGG | 0.612197 | 1_2:+2183985 | Msa0049030:CDS |
TGGCTTCTTTCTCGGCACTG+AGG | 0.612609 | 1_2:-2183547 | None:intergenic |
ATCGAGAGCATCCCTACTGA+AGG | 0.612994 | 1_2:-2184077 | None:intergenic |
GCATAGTTCAGATTGCTACA+AGG | 0.615746 | 1_2:+2183745 | Msa0049030:CDS |
TACTATGTGACAGATTATCT+CGG | 0.618368 | 1_2:+2184046 | Msa0049030:CDS |
ATTATTATCCTCTCCATCTG+TGG | 0.619270 | 1_2:-2183882 | None:intergenic |
TGAACACGGTCATGGCTGAA+AGG | 0.620232 | 1_2:+2184023 | Msa0049030:CDS |
CTTGTCGATAAGCACGACCC+GGG | 0.628203 | 1_2:+2184172 | Msa0049030:CDS |
ACTTGCACACAACTAAGTGT+AGG | 0.640898 | 1_2:-2184951 | None:intergenic |
ACTTTGAACAGCATTCAACA+TGG | 0.643300 | 1_2:-2184572 | None:intergenic |
GGAGGCTGCCACAGATGGAG+AGG | 0.645603 | 1_2:+2183874 | Msa0049030:CDS |
AAGCTATCAGAAGATTCTCG+TGG | 0.653064 | 1_2:+2183397 | Msa0049030:CDS |
ATTATTACTAGCCTAGTGAG+TGG | 0.653310 | 1_2:+2184520 | Msa0049030:CDS |
TGAAGAACTCCATGTTCCGG+AGG | 0.656619 | 1_2:+2183856 | Msa0049030:CDS |
AATGCTGTTCAAAGTCAGAT+GGG | 0.656650 | 1_2:+2184580 | Msa0049030:CDS |
ACTTGTCGATAAGCACGACC+CGG | 0.656700 | 1_2:+2184171 | Msa0049030:CDS |
GCTTCTTTCTCGGCACTGAG+GGG | 0.663612 | 1_2:-2183545 | None:intergenic |
AAATTCAACCAAGAATATGG+TGG | 0.668921 | 1_2:+2184295 | Msa0049030:CDS |
TTAAACGTATGATGATAATG+GGG | 0.679275 | 1_2:-2184799 | None:intergenic |
AGACTTGTACGTGAAAGAGT+TGG | 0.691935 | 1_2:+2184544 | Msa0049030:CDS |
GCCACTTGTCAATGCAAGGT+AGG | 0.694066 | 1_2:-2184822 | None:intergenic |
AATGGATGGCAACAACACAA+AGG | 0.695166 | 1_2:+2185006 | Msa0049030:CDS |
AGTGCTGATTGTGCTGAACA+CGG | 0.717577 | 1_2:+2184009 | Msa0049030:CDS |
AGAGTCGGAGTGAAAACACG+TGG | 0.744559 | 1_2:-2183347 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTCAACAAACATGTAAT+GGG | - | chr1_2:2183525-2183544 | None:intergenic | 20.0% |
!! | GCTTAATTTCCTTTAAATTA+AGG | - | chr1_2:2183658-2183677 | None:intergenic | 20.0% |
!! | GAAGATTATTAAAAATGACA+AGG | + | chr1_2:2184108-2184127 | Msa0049030:CDS | 20.0% |
!! | ATTGCAATATTTACATAACT+TGG | + | chr1_2:2184375-2184394 | Msa0049030:CDS | 20.0% |
!! | TTGCAATATTTACATAACTT+GGG | + | chr1_2:2184376-2184395 | Msa0049030:CDS | 20.0% |
!!! | AAGATTAATGTTTTTTGCAA+TGG | + | chr1_2:2184904-2184923 | Msa0049030:CDS | 20.0% |
!! | TCTAGAAAATTACTAAGATT+TGG | - | chr1_2:2185352-2185371 | None:intergenic | 20.0% |
!!! | TTTTATTTTATTTCAACCCA+TGG | + | chr1_2:2185391-2185410 | Msa0049030:intron | 20.0% |
!!! | TTTATTTTATTTCAACCCAT+GGG | + | chr1_2:2185392-2185411 | Msa0049030:intron | 20.0% |
!! | TATTTCAACAAACATGTAAT+GGG | - | chr1_2:2183525-2183544 | None:intergenic | 20.0% |
!! | GCTTAATTTCCTTTAAATTA+AGG | - | chr1_2:2183658-2183677 | None:intergenic | 20.0% |
!! | GAAGATTATTAAAAATGACA+AGG | + | chr1_2:2184108-2184127 | Msa0049030:CDS | 20.0% |
!! | ATTGCAATATTTACATAACT+TGG | + | chr1_2:2184375-2184394 | Msa0049030:CDS | 20.0% |
!! | TTGCAATATTTACATAACTT+GGG | + | chr1_2:2184376-2184395 | Msa0049030:CDS | 20.0% |
!!! | AAGATTAATGTTTTTTGCAA+TGG | + | chr1_2:2184904-2184923 | Msa0049030:CDS | 20.0% |
!! | TCTAGAAAATTACTAAGATT+TGG | - | chr1_2:2185352-2185371 | None:intergenic | 20.0% |
!!! | TTTTATTTTATTTCAACCCA+TGG | + | chr1_2:2185391-2185410 | Msa0049030:intron | 20.0% |
!!! | TTTATTTTATTTCAACCCAT+GGG | + | chr1_2:2185392-2185411 | Msa0049030:intron | 20.0% |
!! | GAATTTCACCAATCTATTTT+CGG | - | chr1_2:2183480-2183499 | None:intergenic | 25.0% |
! | GTATTTCAACAAACATGTAA+TGG | - | chr1_2:2183526-2183545 | None:intergenic | 25.0% |
! | TTAAGGTAGCTAATGTTTAT+AGG | - | chr1_2:2183641-2183660 | None:intergenic | 25.0% |
! | CATTAGCTACCTTAATTTAA+AGG | + | chr1_2:2183646-2183665 | Msa0049030:CDS | 25.0% |
! | CATAAATTCAACCAAGAATA+TGG | + | chr1_2:2184292-2184311 | Msa0049030:CDS | 25.0% |
! | TTGTATGTTCTATTGATCTT+TGG | + | chr1_2:2184452-2184471 | Msa0049030:CDS | 25.0% |
! | TTTCAACATATCTTTGACAT+TGG | + | chr1_2:2184628-2184647 | Msa0049030:CDS | 25.0% |
!! | TTAAACGTATGATGATAATG+GGG | - | chr1_2:2184802-2184821 | None:intergenic | 25.0% |
! | GTTAAACGTATGATGATAAT+GGG | - | chr1_2:2184803-2184822 | None:intergenic | 25.0% |
!! | TGTTTTCCAATCTCTTAATT+TGG | - | chr1_2:2185034-2185053 | None:intergenic | 25.0% |
! | ATGCTACTATATTTCTTCAA+TGG | + | chr1_2:2185118-2185137 | Msa0049030:intron | 25.0% |
! | TGCTACTATATTTCTTCAAT+GGG | + | chr1_2:2185119-2185138 | Msa0049030:intron | 25.0% |
!!! | AAACTTGTTCTTTTCTATCT+AGG | + | chr1_2:2185582-2185601 | Msa0049030:intron | 25.0% |
!! | GAATTTCACCAATCTATTTT+CGG | - | chr1_2:2183480-2183499 | None:intergenic | 25.0% |
! | GTATTTCAACAAACATGTAA+TGG | - | chr1_2:2183526-2183545 | None:intergenic | 25.0% |
! | TTAAGGTAGCTAATGTTTAT+AGG | - | chr1_2:2183641-2183660 | None:intergenic | 25.0% |
! | CATTAGCTACCTTAATTTAA+AGG | + | chr1_2:2183646-2183665 | Msa0049030:CDS | 25.0% |
! | CATAAATTCAACCAAGAATA+TGG | + | chr1_2:2184292-2184311 | Msa0049030:CDS | 25.0% |
! | TTGTATGTTCTATTGATCTT+TGG | + | chr1_2:2184452-2184471 | Msa0049030:CDS | 25.0% |
! | TTTCAACATATCTTTGACAT+TGG | + | chr1_2:2184628-2184647 | Msa0049030:CDS | 25.0% |
!! | TTAAACGTATGATGATAATG+GGG | - | chr1_2:2184802-2184821 | None:intergenic | 25.0% |
! | GTTAAACGTATGATGATAAT+GGG | - | chr1_2:2184803-2184822 | None:intergenic | 25.0% |
!! | TGTTTTCCAATCTCTTAATT+TGG | - | chr1_2:2185034-2185053 | None:intergenic | 25.0% |
! | ATGCTACTATATTTCTTCAA+TGG | + | chr1_2:2185118-2185137 | Msa0049030:intron | 25.0% |
! | TGCTACTATATTTCTTCAAT+GGG | + | chr1_2:2185119-2185138 | Msa0049030:intron | 25.0% |
!!! | AAACTTGTTCTTTTCTATCT+AGG | + | chr1_2:2185582-2185601 | Msa0049030:intron | 25.0% |
TAAAGGAAATTAAGCTGAGT+CGG | + | chr1_2:2183663-2183682 | Msa0049030:CDS | 30.0% | |
! | TCGGAATGATTTTCATATGA+AGG | + | chr1_2:2183682-2183701 | Msa0049030:CDS | 30.0% |
! | CGGAATGATTTTCATATGAA+GGG | + | chr1_2:2183683-2183702 | Msa0049030:CDS | 30.0% |
!! | CATCTTGACTGTATTTTAAG+AGG | - | chr1_2:2183919-2183938 | None:intergenic | 30.0% |
TACTATGTGACAGATTATCT+CGG | + | chr1_2:2184046-2184065 | Msa0049030:CDS | 30.0% | |
TAAGAAGCTTGATTTCATCT+AGG | - | chr1_2:2184150-2184169 | None:intergenic | 30.0% | |
!! | TTATGACTATTTCTACCATC+AGG | + | chr1_2:2184219-2184238 | Msa0049030:CDS | 30.0% |
CAATGAATAAATGTTCCTGA+TGG | - | chr1_2:2184237-2184256 | None:intergenic | 30.0% | |
AAATTCAACCAAGAATATGG+TGG | + | chr1_2:2184295-2184314 | Msa0049030:CDS | 30.0% | |
ATAGAGAAGACAGAATTATG+AGG | - | chr1_2:2184424-2184443 | None:intergenic | 30.0% | |
!! | CATTCGAATAATTCTGGAAT+AGG | + | chr1_2:2184475-2184494 | Msa0049030:CDS | 30.0% |
GGTTAAACGTATGATGATAA+TGG | - | chr1_2:2184804-2184823 | None:intergenic | 30.0% | |
AAGGTTCCAAATTAAGAGAT+TGG | + | chr1_2:2185025-2185044 | Msa0049030:intron | 30.0% | |
GTATTATTGTGAAAGACTCT+AGG | + | chr1_2:2185055-2185074 | Msa0049030:intron | 30.0% | |
TTTATCAAAATGAGAACTCG+AGG | + | chr1_2:2185253-2185272 | Msa0049030:intron | 30.0% | |
GAAAGAAATAACAAACCCAT+GGG | - | chr1_2:2185410-2185429 | None:intergenic | 30.0% | |
TGAAAGAAATAACAAACCCA+TGG | - | chr1_2:2185411-2185430 | None:intergenic | 30.0% | |
! | AATCAAAAAGTGTACCTCTT+AGG | - | chr1_2:2185457-2185476 | None:intergenic | 30.0% |
CGACAAACCTATCAAAATAA+GGG | - | chr1_2:2185528-2185547 | None:intergenic | 30.0% | |
TAAAGGAAATTAAGCTGAGT+CGG | + | chr1_2:2183663-2183682 | Msa0049030:CDS | 30.0% | |
! | TCGGAATGATTTTCATATGA+AGG | + | chr1_2:2183682-2183701 | Msa0049030:CDS | 30.0% |
! | CGGAATGATTTTCATATGAA+GGG | + | chr1_2:2183683-2183702 | Msa0049030:CDS | 30.0% |
!! | CATCTTGACTGTATTTTAAG+AGG | - | chr1_2:2183919-2183938 | None:intergenic | 30.0% |
TACTATGTGACAGATTATCT+CGG | + | chr1_2:2184046-2184065 | Msa0049030:CDS | 30.0% | |
TAAGAAGCTTGATTTCATCT+AGG | - | chr1_2:2184150-2184169 | None:intergenic | 30.0% | |
!! | TTATGACTATTTCTACCATC+AGG | + | chr1_2:2184219-2184238 | Msa0049030:CDS | 30.0% |
CAATGAATAAATGTTCCTGA+TGG | - | chr1_2:2184237-2184256 | None:intergenic | 30.0% | |
AAATTCAACCAAGAATATGG+TGG | + | chr1_2:2184295-2184314 | Msa0049030:CDS | 30.0% | |
ATAGAGAAGACAGAATTATG+AGG | - | chr1_2:2184424-2184443 | None:intergenic | 30.0% | |
!! | CATTCGAATAATTCTGGAAT+AGG | + | chr1_2:2184475-2184494 | Msa0049030:CDS | 30.0% |
GGTTAAACGTATGATGATAA+TGG | - | chr1_2:2184804-2184823 | None:intergenic | 30.0% | |
AAGGTTCCAAATTAAGAGAT+TGG | + | chr1_2:2185025-2185044 | Msa0049030:intron | 30.0% | |
GTATTATTGTGAAAGACTCT+AGG | + | chr1_2:2185055-2185074 | Msa0049030:intron | 30.0% | |
TTTATCAAAATGAGAACTCG+AGG | + | chr1_2:2185253-2185272 | Msa0049030:intron | 30.0% | |
GAAAGAAATAACAAACCCAT+GGG | - | chr1_2:2185410-2185429 | None:intergenic | 30.0% | |
TGAAAGAAATAACAAACCCA+TGG | - | chr1_2:2185411-2185430 | None:intergenic | 30.0% | |
! | AATCAAAAAGTGTACCTCTT+AGG | - | chr1_2:2185457-2185476 | None:intergenic | 30.0% |
CGACAAACCTATCAAAATAA+GGG | - | chr1_2:2185528-2185547 | None:intergenic | 30.0% | |
TGTGAATGTTTCGATAGTAG+TGG | - | chr1_2:2183326-2183345 | None:intergenic | 35.0% | |
GGTGAAATTCATCACAACAT+CGG | + | chr1_2:2183490-2183509 | Msa0049030:CDS | 35.0% | |
AACTTCAGAATTATGCGCAA+TGG | - | chr1_2:2183570-2183589 | None:intergenic | 35.0% | |
ATCTGTTTCAACAACTTCGA+TGG | - | chr1_2:2183786-2183805 | None:intergenic | 35.0% | |
TTGAAACAGATCTACCGAAT+GGG | + | chr1_2:2183795-2183814 | Msa0049030:CDS | 35.0% | |
GGAGTTCTTCACTCAAATAT+CGG | - | chr1_2:2183847-2183866 | None:intergenic | 35.0% | |
ATTATTATCCTCTCCATCTG+TGG | - | chr1_2:2183885-2183904 | None:intergenic | 35.0% | |
TTTGAGCTAAGAATTGTGCA+TGG | + | chr1_2:2183953-2183972 | Msa0049030:CDS | 35.0% | |
GAATTGTGCATGGAAAGAAT+AGG | + | chr1_2:2183963-2183982 | Msa0049030:CDS | 35.0% | |
GACTGGATTTGAAGAAAACA+AGG | + | chr1_2:2183985-2184004 | Msa0049030:CDS | 35.0% | |
CTTTGGCATTCGAATAATTC+TGG | + | chr1_2:2184469-2184488 | Msa0049030:CDS | 35.0% | |
! | ATTATTACTAGCCTAGTGAG+TGG | + | chr1_2:2184520-2184539 | Msa0049030:CDS | 35.0% |
! | TTATTACTAGCCTAGTGAGT+GGG | + | chr1_2:2184521-2184540 | Msa0049030:CDS | 35.0% |
ACTTTGAACAGCATTCAACA+TGG | - | chr1_2:2184575-2184594 | None:intergenic | 35.0% | |
AATGCTGTTCAAAGTCAGAT+GGG | + | chr1_2:2184580-2184599 | Msa0049030:CDS | 35.0% | |
CACTTGTGATTGAGACTATT+GGG | - | chr1_2:2184693-2184712 | None:intergenic | 35.0% | |
TCACTTGTGATTGAGACTAT+TGG | - | chr1_2:2184694-2184713 | None:intergenic | 35.0% | |
!! | GACAACAATTTTGATGCTTG+TGG | + | chr1_2:2184712-2184731 | Msa0049030:CDS | 35.0% |
ACAGAAAAGCAAGCACTTAA+TGG | + | chr1_2:2184988-2185007 | Msa0049030:CDS | 35.0% | |
AAAAGCAAGCACTTAATGGA+TGG | + | chr1_2:2184992-2185011 | Msa0049030:CDS | 35.0% | |
TAGAACTTATGTAGCCTAAG+AGG | + | chr1_2:2185440-2185459 | Msa0049030:intron | 35.0% | |
TCGAGAATTTCTCTCAATTC+TGG | + | chr1_2:2185489-2185508 | Msa0049030:intron | 35.0% | |
AGAATTTCTCTCAATTCTGG+TGG | + | chr1_2:2185492-2185511 | Msa0049030:intron | 35.0% | |
CCTATCAAAATAAGGGTTTC+CGG | - | chr1_2:2185521-2185540 | None:intergenic | 35.0% | |
GCGACAAACCTATCAAAATA+AGG | - | chr1_2:2185529-2185548 | None:intergenic | 35.0% | |
GCGACAAACTTGTGAAAATA+GGG | - | chr1_2:2185558-2185577 | None:intergenic | 35.0% | |
AGCGACAAACTTGTGAAAAT+AGG | - | chr1_2:2185559-2185578 | None:intergenic | 35.0% | |
GGGATGCAATACATAAAGTA+TGG | + | chr1_2:2185647-2185666 | Msa0049030:intron | 35.0% | |
TGTGAATGTTTCGATAGTAG+TGG | - | chr1_2:2183326-2183345 | None:intergenic | 35.0% | |
GGTGAAATTCATCACAACAT+CGG | + | chr1_2:2183490-2183509 | Msa0049030:CDS | 35.0% | |
AACTTCAGAATTATGCGCAA+TGG | - | chr1_2:2183570-2183589 | None:intergenic | 35.0% | |
ATCTGTTTCAACAACTTCGA+TGG | - | chr1_2:2183786-2183805 | None:intergenic | 35.0% | |
TTGAAACAGATCTACCGAAT+GGG | + | chr1_2:2183795-2183814 | Msa0049030:CDS | 35.0% | |
GGAGTTCTTCACTCAAATAT+CGG | - | chr1_2:2183847-2183866 | None:intergenic | 35.0% | |
ATTATTATCCTCTCCATCTG+TGG | - | chr1_2:2183885-2183904 | None:intergenic | 35.0% | |
TTTGAGCTAAGAATTGTGCA+TGG | + | chr1_2:2183953-2183972 | Msa0049030:CDS | 35.0% | |
GAATTGTGCATGGAAAGAAT+AGG | + | chr1_2:2183963-2183982 | Msa0049030:CDS | 35.0% | |
GACTGGATTTGAAGAAAACA+AGG | + | chr1_2:2183985-2184004 | Msa0049030:CDS | 35.0% | |
CTTTGGCATTCGAATAATTC+TGG | + | chr1_2:2184469-2184488 | Msa0049030:CDS | 35.0% | |
! | ATTATTACTAGCCTAGTGAG+TGG | + | chr1_2:2184520-2184539 | Msa0049030:CDS | 35.0% |
! | TTATTACTAGCCTAGTGAGT+GGG | + | chr1_2:2184521-2184540 | Msa0049030:CDS | 35.0% |
ACTTTGAACAGCATTCAACA+TGG | - | chr1_2:2184575-2184594 | None:intergenic | 35.0% | |
AATGCTGTTCAAAGTCAGAT+GGG | + | chr1_2:2184580-2184599 | Msa0049030:CDS | 35.0% | |
CACTTGTGATTGAGACTATT+GGG | - | chr1_2:2184693-2184712 | None:intergenic | 35.0% | |
TCACTTGTGATTGAGACTAT+TGG | - | chr1_2:2184694-2184713 | None:intergenic | 35.0% | |
!! | GACAACAATTTTGATGCTTG+TGG | + | chr1_2:2184712-2184731 | Msa0049030:CDS | 35.0% |
ACAGAAAAGCAAGCACTTAA+TGG | + | chr1_2:2184988-2185007 | Msa0049030:CDS | 35.0% | |
AAAAGCAAGCACTTAATGGA+TGG | + | chr1_2:2184992-2185011 | Msa0049030:CDS | 35.0% | |
TAGAACTTATGTAGCCTAAG+AGG | + | chr1_2:2185440-2185459 | Msa0049030:intron | 35.0% | |
TCGAGAATTTCTCTCAATTC+TGG | + | chr1_2:2185489-2185508 | Msa0049030:intron | 35.0% | |
AGAATTTCTCTCAATTCTGG+TGG | + | chr1_2:2185492-2185511 | Msa0049030:intron | 35.0% | |
CCTATCAAAATAAGGGTTTC+CGG | - | chr1_2:2185521-2185540 | None:intergenic | 35.0% | |
GCGACAAACCTATCAAAATA+AGG | - | chr1_2:2185529-2185548 | None:intergenic | 35.0% | |
GCGACAAACTTGTGAAAATA+GGG | - | chr1_2:2185558-2185577 | None:intergenic | 35.0% | |
AGCGACAAACTTGTGAAAAT+AGG | - | chr1_2:2185559-2185578 | None:intergenic | 35.0% | |
GGGATGCAATACATAAAGTA+TGG | + | chr1_2:2185647-2185666 | Msa0049030:intron | 35.0% | |
ATCTTCTGATAGCTTCGATC+CGG | - | chr1_2:2183392-2183411 | None:intergenic | 40.0% | |
AAGCTATCAGAAGATTCTCG+TGG | + | chr1_2:2183397-2183416 | Msa0049030:CDS | 40.0% | |
!!! | AATCTATTTTCGGTGTCTGG+TGG | - | chr1_2:2183470-2183489 | None:intergenic | 40.0% |
ACCAGACACCGAAAATAGAT+TGG | + | chr1_2:2183469-2183488 | Msa0049030:CDS | 40.0% | |
!!! | ACCAATCTATTTTCGGTGTC+TGG | - | chr1_2:2183473-2183492 | None:intergenic | 40.0% |
GCAATCTGAACTATGCTTCA+TGG | - | chr1_2:2183741-2183760 | None:intergenic | 40.0% | |
GCATAGTTCAGATTGCTACA+AGG | + | chr1_2:2183745-2183764 | Msa0049030:CDS | 40.0% | |
GTTGAAACAGATCTACCGAA+TGG | + | chr1_2:2183794-2183813 | Msa0049030:CDS | 40.0% | |
CCATTGCTTTCAATCCCATT+CGG | - | chr1_2:2183812-2183831 | None:intergenic | 40.0% | |
AGTCATAAAGACGCAGTATG+TGG | - | chr1_2:2184207-2184226 | None:intergenic | 40.0% | |
TAAGTTTGCACGCAGAAGTT+CGG | - | chr1_2:2184263-2184282 | None:intergenic | 40.0% | |
ATGCTTCACCACCATATTCT+TGG | - | chr1_2:2184306-2184325 | None:intergenic | 40.0% | |
CATTACTCGACAGTGTTTAG+AGG | + | chr1_2:2184351-2184370 | Msa0049030:CDS | 40.0% | |
AGACAGAATTATGAGGCTTC+AGG | - | chr1_2:2184417-2184436 | None:intergenic | 40.0% | |
AGACTTGTACGTGAAAGAGT+TGG | + | chr1_2:2184544-2184563 | Msa0049030:CDS | 40.0% | |
GAATGCTGTTCAAAGTCAGA+TGG | + | chr1_2:2184579-2184598 | Msa0049030:CDS | 40.0% | |
TTTGACATTGGATGTGACAG+AGG | + | chr1_2:2184640-2184659 | Msa0049030:CDS | 40.0% | |
TTCCTGTTCAATTTGCCTTC+AGG | + | chr1_2:2184744-2184763 | Msa0049030:CDS | 40.0% | |
ATCCTGAAGGCAAATTGAAC+AGG | - | chr1_2:2184749-2184768 | None:intergenic | 40.0% | |
TTGCCTTCAGGATTTCCAAA+TGG | + | chr1_2:2184756-2184775 | Msa0049030:CDS | 40.0% | |
TGCCTTCAGGATTTCCAAAT+GGG | + | chr1_2:2184757-2184776 | Msa0049030:CDS | 40.0% | |
TTCTAACAGTCTCTCCCATT+TGG | - | chr1_2:2184774-2184793 | None:intergenic | 40.0% | |
ACTTGCACACAACTAAGTGT+AGG | - | chr1_2:2184954-2184973 | None:intergenic | 40.0% | |
! | TGTGCAAGTGTGGTTTTTGT+GGG | + | chr1_2:2184965-2184984 | Msa0049030:CDS | 40.0% |
AATGGATGGCAACAACACAA+AGG | + | chr1_2:2185006-2185025 | Msa0049030:CDS | 40.0% | |
TTCACCATCCATTGTTCTAG+AGG | - | chr1_2:2185084-2185103 | None:intergenic | 40.0% | |
! | TCTAGAACAATGGATGGTGA+AGG | + | chr1_2:2185083-2185102 | Msa0049030:intron | 40.0% |
ATCCTCGCATTTCACTCAAT+GGG | + | chr1_2:2185176-2185195 | Msa0049030:intron | 40.0% | |
ATTGGAGGAGTAAACATGCA+TGG | + | chr1_2:2185223-2185242 | Msa0049030:intron | 40.0% | |
TTGGAGGAGTAAACATGCAT+GGG | + | chr1_2:2185224-2185243 | Msa0049030:intron | 40.0% | |
!!! | CCGGAAACCCTTATTTTGAT+AGG | + | chr1_2:2185518-2185537 | Msa0049030:intron | 40.0% |
ATCTTCTGATAGCTTCGATC+CGG | - | chr1_2:2183392-2183411 | None:intergenic | 40.0% | |
AAGCTATCAGAAGATTCTCG+TGG | + | chr1_2:2183397-2183416 | Msa0049030:CDS | 40.0% | |
!!! | AATCTATTTTCGGTGTCTGG+TGG | - | chr1_2:2183470-2183489 | None:intergenic | 40.0% |
ACCAGACACCGAAAATAGAT+TGG | + | chr1_2:2183469-2183488 | Msa0049030:CDS | 40.0% | |
!!! | ACCAATCTATTTTCGGTGTC+TGG | - | chr1_2:2183473-2183492 | None:intergenic | 40.0% |
GCAATCTGAACTATGCTTCA+TGG | - | chr1_2:2183741-2183760 | None:intergenic | 40.0% | |
GCATAGTTCAGATTGCTACA+AGG | + | chr1_2:2183745-2183764 | Msa0049030:CDS | 40.0% | |
GTTGAAACAGATCTACCGAA+TGG | + | chr1_2:2183794-2183813 | Msa0049030:CDS | 40.0% | |
CCATTGCTTTCAATCCCATT+CGG | - | chr1_2:2183812-2183831 | None:intergenic | 40.0% | |
AGTCATAAAGACGCAGTATG+TGG | - | chr1_2:2184207-2184226 | None:intergenic | 40.0% | |
TAAGTTTGCACGCAGAAGTT+CGG | - | chr1_2:2184263-2184282 | None:intergenic | 40.0% | |
ATGCTTCACCACCATATTCT+TGG | - | chr1_2:2184306-2184325 | None:intergenic | 40.0% | |
CATTACTCGACAGTGTTTAG+AGG | + | chr1_2:2184351-2184370 | Msa0049030:CDS | 40.0% | |
AGACAGAATTATGAGGCTTC+AGG | - | chr1_2:2184417-2184436 | None:intergenic | 40.0% | |
AGACTTGTACGTGAAAGAGT+TGG | + | chr1_2:2184544-2184563 | Msa0049030:CDS | 40.0% | |
GAATGCTGTTCAAAGTCAGA+TGG | + | chr1_2:2184579-2184598 | Msa0049030:CDS | 40.0% | |
TTTGACATTGGATGTGACAG+AGG | + | chr1_2:2184640-2184659 | Msa0049030:CDS | 40.0% | |
TTCCTGTTCAATTTGCCTTC+AGG | + | chr1_2:2184744-2184763 | Msa0049030:CDS | 40.0% | |
ATCCTGAAGGCAAATTGAAC+AGG | - | chr1_2:2184749-2184768 | None:intergenic | 40.0% | |
TTGCCTTCAGGATTTCCAAA+TGG | + | chr1_2:2184756-2184775 | Msa0049030:CDS | 40.0% | |
TGCCTTCAGGATTTCCAAAT+GGG | + | chr1_2:2184757-2184776 | Msa0049030:CDS | 40.0% | |
TTCTAACAGTCTCTCCCATT+TGG | - | chr1_2:2184774-2184793 | None:intergenic | 40.0% | |
ACTTGCACACAACTAAGTGT+AGG | - | chr1_2:2184954-2184973 | None:intergenic | 40.0% | |
! | TGTGCAAGTGTGGTTTTTGT+GGG | + | chr1_2:2184965-2184984 | Msa0049030:CDS | 40.0% |
AATGGATGGCAACAACACAA+AGG | + | chr1_2:2185006-2185025 | Msa0049030:CDS | 40.0% | |
TTCACCATCCATTGTTCTAG+AGG | - | chr1_2:2185084-2185103 | None:intergenic | 40.0% | |
! | TCTAGAACAATGGATGGTGA+AGG | + | chr1_2:2185083-2185102 | Msa0049030:intron | 40.0% |
ATCCTCGCATTTCACTCAAT+GGG | + | chr1_2:2185176-2185195 | Msa0049030:intron | 40.0% | |
ATTGGAGGAGTAAACATGCA+TGG | + | chr1_2:2185223-2185242 | Msa0049030:intron | 40.0% | |
TTGGAGGAGTAAACATGCAT+GGG | + | chr1_2:2185224-2185243 | Msa0049030:intron | 40.0% | |
!!! | CCGGAAACCCTTATTTTGAT+AGG | + | chr1_2:2185518-2185537 | Msa0049030:intron | 40.0% |
ATGCGCAATGGCTTCTTTCT+CGG | - | chr1_2:2183558-2183577 | None:intergenic | 45.0% | |
!! | CCTGGACTGCTTTTGCAAAA+TGG | - | chr1_2:2183593-2183612 | None:intergenic | 45.0% |
! | CCATTTTGCAAAAGCAGTCC+AGG | + | chr1_2:2183590-2183609 | Msa0049030:CDS | 45.0% |
GTTCAGCAGGTTCTTGTAGT+GGG | + | chr1_2:2183612-2183631 | Msa0049030:CDS | 45.0% | |
TTCAGCAGGTTCTTGTAGTG+GGG | + | chr1_2:2183613-2183632 | Msa0049030:CDS | 45.0% | |
CCGAATGGGATTGAAAGCAA+TGG | + | chr1_2:2183809-2183828 | Msa0049030:CDS | 45.0% | |
GGGATTGAAAGCAATGGAGT+AGG | + | chr1_2:2183815-2183834 | Msa0049030:CDS | 45.0% | |
GAGTGAAGAACTCCATGTTC+CGG | + | chr1_2:2183853-2183872 | Msa0049030:CDS | 45.0% | |
GTGCATGGAAAGAATAGGAC+TGG | + | chr1_2:2183968-2183987 | Msa0049030:CDS | 45.0% | |
!! | AGTGCTGATTGTGCTGAACA+CGG | + | chr1_2:2184009-2184028 | Msa0049030:CDS | 45.0% |
AGTATGTGGCGTTTATCTCC+CGG | - | chr1_2:2184193-2184212 | None:intergenic | 45.0% | |
CTCCCATTTGGAAATCCTGA+AGG | - | chr1_2:2184762-2184781 | None:intergenic | 45.0% | |
! | ACCTACCTTGCATTGACAAG+TGG | + | chr1_2:2184821-2184840 | Msa0049030:CDS | 45.0% |
ATGAGCCACTTGTCAATGCA+AGG | - | chr1_2:2184829-2184848 | None:intergenic | 45.0% | |
GCTCACTGTCTCTGCATAAT+GGG | - | chr1_2:2184867-2184886 | None:intergenic | 45.0% | |
TGCTCACTGTCTCTGCATAA+TGG | - | chr1_2:2184868-2184887 | None:intergenic | 45.0% | |
CACACAACTAAGTGTAGGCT+TGG | - | chr1_2:2184949-2184968 | None:intergenic | 45.0% | |
CACTTAGTTGTGTGCAAGTG+TGG | + | chr1_2:2184955-2184974 | Msa0049030:CDS | 45.0% | |
! | GTGTGCAAGTGTGGTTTTTG+TGG | + | chr1_2:2184964-2184983 | Msa0049030:CDS | 45.0% |
!! | CTAGGCTACCTCTAGAACAA+TGG | + | chr1_2:2185073-2185092 | Msa0049030:intron | 45.0% |
!! | GCTACCTCTAGAACAATGGA+TGG | + | chr1_2:2185077-2185096 | Msa0049030:intron | 45.0% |
CATCCTCGCATTTCACTCAA+TGG | + | chr1_2:2185175-2185194 | Msa0049030:intron | 45.0% | |
ATCCCATTGAGTGAAATGCG+AGG | - | chr1_2:2185181-2185200 | None:intergenic | 45.0% | |
CATTTCACTCAATGGGATCC+AGG | + | chr1_2:2185183-2185202 | Msa0049030:intron | 45.0% | |
!! | CTCTCAATTCTGGTGGATTC+CGG | + | chr1_2:2185499-2185518 | Msa0049030:intron | 45.0% |
CTTCCGTACTGCGTCAATAT+GGG | + | chr1_2:2185627-2185646 | Msa0049030:intron | 45.0% | |
CATCCCATATTGACGCAGTA+CGG | - | chr1_2:2185633-2185652 | None:intergenic | 45.0% | |
ATGCGCAATGGCTTCTTTCT+CGG | - | chr1_2:2183558-2183577 | None:intergenic | 45.0% | |
!! | CCTGGACTGCTTTTGCAAAA+TGG | - | chr1_2:2183593-2183612 | None:intergenic | 45.0% |
! | CCATTTTGCAAAAGCAGTCC+AGG | + | chr1_2:2183590-2183609 | Msa0049030:CDS | 45.0% |
GTTCAGCAGGTTCTTGTAGT+GGG | + | chr1_2:2183612-2183631 | Msa0049030:CDS | 45.0% | |
TTCAGCAGGTTCTTGTAGTG+GGG | + | chr1_2:2183613-2183632 | Msa0049030:CDS | 45.0% | |
CCGAATGGGATTGAAAGCAA+TGG | + | chr1_2:2183809-2183828 | Msa0049030:CDS | 45.0% | |
GGGATTGAAAGCAATGGAGT+AGG | + | chr1_2:2183815-2183834 | Msa0049030:CDS | 45.0% | |
GAGTGAAGAACTCCATGTTC+CGG | + | chr1_2:2183853-2183872 | Msa0049030:CDS | 45.0% | |
GTGCATGGAAAGAATAGGAC+TGG | + | chr1_2:2183968-2183987 | Msa0049030:CDS | 45.0% | |
!! | AGTGCTGATTGTGCTGAACA+CGG | + | chr1_2:2184009-2184028 | Msa0049030:CDS | 45.0% |
AGTATGTGGCGTTTATCTCC+CGG | - | chr1_2:2184193-2184212 | None:intergenic | 45.0% | |
CTCCCATTTGGAAATCCTGA+AGG | - | chr1_2:2184762-2184781 | None:intergenic | 45.0% | |
! | ACCTACCTTGCATTGACAAG+TGG | + | chr1_2:2184821-2184840 | Msa0049030:CDS | 45.0% |
ATGAGCCACTTGTCAATGCA+AGG | - | chr1_2:2184829-2184848 | None:intergenic | 45.0% | |
GCTCACTGTCTCTGCATAAT+GGG | - | chr1_2:2184867-2184886 | None:intergenic | 45.0% | |
TGCTCACTGTCTCTGCATAA+TGG | - | chr1_2:2184868-2184887 | None:intergenic | 45.0% | |
CACACAACTAAGTGTAGGCT+TGG | - | chr1_2:2184949-2184968 | None:intergenic | 45.0% | |
CACTTAGTTGTGTGCAAGTG+TGG | + | chr1_2:2184955-2184974 | Msa0049030:CDS | 45.0% | |
! | GTGTGCAAGTGTGGTTTTTG+TGG | + | chr1_2:2184964-2184983 | Msa0049030:CDS | 45.0% |
!! | CTAGGCTACCTCTAGAACAA+TGG | + | chr1_2:2185073-2185092 | Msa0049030:intron | 45.0% |
!! | GCTACCTCTAGAACAATGGA+TGG | + | chr1_2:2185077-2185096 | Msa0049030:intron | 45.0% |
CATCCTCGCATTTCACTCAA+TGG | + | chr1_2:2185175-2185194 | Msa0049030:intron | 45.0% | |
ATCCCATTGAGTGAAATGCG+AGG | - | chr1_2:2185181-2185200 | None:intergenic | 45.0% | |
CATTTCACTCAATGGGATCC+AGG | + | chr1_2:2185183-2185202 | Msa0049030:intron | 45.0% | |
!! | CTCTCAATTCTGGTGGATTC+CGG | + | chr1_2:2185499-2185518 | Msa0049030:intron | 45.0% |
CTTCCGTACTGCGTCAATAT+GGG | + | chr1_2:2185627-2185646 | Msa0049030:intron | 45.0% | |
CATCCCATATTGACGCAGTA+CGG | - | chr1_2:2185633-2185652 | None:intergenic | 45.0% | |
AGAGTCGGAGTGAAAACACG+TGG | - | chr1_2:2183350-2183369 | None:intergenic | 50.0% | |
TAGCTTCGATCCGGAGGTTT+GGG | - | chr1_2:2183383-2183402 | None:intergenic | 50.0% | |
ATAGCTTCGATCCGGAGGTT+TGG | - | chr1_2:2183384-2183403 | None:intergenic | 50.0% | |
TTCTGATAGCTTCGATCCGG+AGG | - | chr1_2:2183389-2183408 | None:intergenic | 50.0% | |
AAAAGCAGTCCAGGTTCAGC+AGG | + | chr1_2:2183599-2183618 | Msa0049030:CDS | 50.0% | |
CTACAAGAACCTGCTGAACC+TGG | - | chr1_2:2183611-2183630 | None:intergenic | 50.0% | |
GGTTCAGCAGGTTCTTGTAG+TGG | + | chr1_2:2183611-2183630 | Msa0049030:CDS | 50.0% | |
TGAAGAACTCCATGTTCCGG+AGG | + | chr1_2:2183856-2183875 | Msa0049030:CDS | 50.0% | |
GATTGTGCTGAACACGGTCA+TGG | + | chr1_2:2184015-2184034 | Msa0049030:CDS | 50.0% | |
TGAACACGGTCATGGCTGAA+AGG | + | chr1_2:2184023-2184042 | Msa0049030:CDS | 50.0% | |
TCGGTTCAGCTACCTTCAGT+AGG | + | chr1_2:2184065-2184084 | Msa0049030:CDS | 50.0% | |
CGGTTCAGCTACCTTCAGTA+GGG | + | chr1_2:2184066-2184085 | Msa0049030:CDS | 50.0% | |
!! | ATCGAGAGCATCCCTACTGA+AGG | - | chr1_2:2184080-2184099 | None:intergenic | 50.0% |
TTCAGTAGGGATGCTCTCGA+TGG | + | chr1_2:2184079-2184098 | Msa0049030:CDS | 50.0% | |
ACTTGTCGATAAGCACGACC+CGG | + | chr1_2:2184171-2184190 | Msa0049030:CDS | 50.0% | |
GTATGTGGCGTTTATCTCCC+GGG | - | chr1_2:2184192-2184211 | None:intergenic | 50.0% | |
GTACAAGTCTCCCACTCACT+AGG | - | chr1_2:2184534-2184553 | None:intergenic | 50.0% | |
GTTCAAAGTCAGATGGGTGC+AGG | + | chr1_2:2184586-2184605 | Msa0049030:CDS | 50.0% | |
GGATGTGACAGAGGCTTACT+AGG | + | chr1_2:2184649-2184668 | Msa0049030:CDS | 50.0% | |
GCCACTTGTCAATGCAAGGT+AGG | - | chr1_2:2184825-2184844 | None:intergenic | 50.0% | |
GACAAGTGGCTCATCAAGCA+TGG | + | chr1_2:2184835-2184854 | Msa0049030:CDS | 50.0% | |
TTCACTCAATGGGATCCAGG+AGG | + | chr1_2:2185186-2185205 | Msa0049030:intron | 50.0% | |
TCACTCAATGGGATCCAGGA+GGG | + | chr1_2:2185187-2185206 | Msa0049030:intron | 50.0% | |
GAGGGTGGTCTCTTGTTCAT+TGG | + | chr1_2:2185205-2185224 | Msa0049030:intron | 50.0% | |
GGTGGTCTCTTGTTCATTGG+AGG | + | chr1_2:2185208-2185227 | Msa0049030:intron | 50.0% | |
TGGAAGAGACTGATGCAGGA+GGG | + | chr1_2:2185292-2185311 | Msa0049030:intron | 50.0% | |
TGACGCAGTACGGAAGCTTA+GGG | - | chr1_2:2185623-2185642 | None:intergenic | 50.0% | |
TTGACGCAGTACGGAAGCTT+AGG | - | chr1_2:2185624-2185643 | None:intergenic | 50.0% | |
GCTTCCGTACTGCGTCAATA+TGG | + | chr1_2:2185626-2185645 | Msa0049030:intron | 50.0% | |
AGAGTCGGAGTGAAAACACG+TGG | - | chr1_2:2183350-2183369 | None:intergenic | 50.0% | |
TAGCTTCGATCCGGAGGTTT+GGG | - | chr1_2:2183383-2183402 | None:intergenic | 50.0% | |
ATAGCTTCGATCCGGAGGTT+TGG | - | chr1_2:2183384-2183403 | None:intergenic | 50.0% | |
TTCTGATAGCTTCGATCCGG+AGG | - | chr1_2:2183389-2183408 | None:intergenic | 50.0% | |
AAAAGCAGTCCAGGTTCAGC+AGG | + | chr1_2:2183599-2183618 | Msa0049030:CDS | 50.0% | |
CTACAAGAACCTGCTGAACC+TGG | - | chr1_2:2183611-2183630 | None:intergenic | 50.0% | |
GGTTCAGCAGGTTCTTGTAG+TGG | + | chr1_2:2183611-2183630 | Msa0049030:CDS | 50.0% | |
TGAAGAACTCCATGTTCCGG+AGG | + | chr1_2:2183856-2183875 | Msa0049030:CDS | 50.0% | |
GATTGTGCTGAACACGGTCA+TGG | + | chr1_2:2184015-2184034 | Msa0049030:CDS | 50.0% | |
TGAACACGGTCATGGCTGAA+AGG | + | chr1_2:2184023-2184042 | Msa0049030:CDS | 50.0% | |
TCGGTTCAGCTACCTTCAGT+AGG | + | chr1_2:2184065-2184084 | Msa0049030:CDS | 50.0% | |
CGGTTCAGCTACCTTCAGTA+GGG | + | chr1_2:2184066-2184085 | Msa0049030:CDS | 50.0% | |
!! | ATCGAGAGCATCCCTACTGA+AGG | - | chr1_2:2184080-2184099 | None:intergenic | 50.0% |
TTCAGTAGGGATGCTCTCGA+TGG | + | chr1_2:2184079-2184098 | Msa0049030:CDS | 50.0% | |
ACTTGTCGATAAGCACGACC+CGG | + | chr1_2:2184171-2184190 | Msa0049030:CDS | 50.0% | |
GTATGTGGCGTTTATCTCCC+GGG | - | chr1_2:2184192-2184211 | None:intergenic | 50.0% | |
GTACAAGTCTCCCACTCACT+AGG | - | chr1_2:2184534-2184553 | None:intergenic | 50.0% | |
GTTCAAAGTCAGATGGGTGC+AGG | + | chr1_2:2184586-2184605 | Msa0049030:CDS | 50.0% | |
GGATGTGACAGAGGCTTACT+AGG | + | chr1_2:2184649-2184668 | Msa0049030:CDS | 50.0% | |
GCCACTTGTCAATGCAAGGT+AGG | - | chr1_2:2184825-2184844 | None:intergenic | 50.0% | |
GACAAGTGGCTCATCAAGCA+TGG | + | chr1_2:2184835-2184854 | Msa0049030:CDS | 50.0% | |
TTCACTCAATGGGATCCAGG+AGG | + | chr1_2:2185186-2185205 | Msa0049030:intron | 50.0% | |
TCACTCAATGGGATCCAGGA+GGG | + | chr1_2:2185187-2185206 | Msa0049030:intron | 50.0% | |
GAGGGTGGTCTCTTGTTCAT+TGG | + | chr1_2:2185205-2185224 | Msa0049030:intron | 50.0% | |
GGTGGTCTCTTGTTCATTGG+AGG | + | chr1_2:2185208-2185227 | Msa0049030:intron | 50.0% | |
TGGAAGAGACTGATGCAGGA+GGG | + | chr1_2:2185292-2185311 | Msa0049030:intron | 50.0% | |
TGACGCAGTACGGAAGCTTA+GGG | - | chr1_2:2185623-2185642 | None:intergenic | 50.0% | |
TTGACGCAGTACGGAAGCTT+AGG | - | chr1_2:2185624-2185643 | None:intergenic | 50.0% | |
GCTTCCGTACTGCGTCAATA+TGG | + | chr1_2:2185626-2185645 | Msa0049030:intron | 50.0% | |
!!! | TTTTCGGTGTCTGGTGGTGC+AGG | - | chr1_2:2183464-2183483 | None:intergenic | 55.0% |
! | GCTTCTTTCTCGGCACTGAG+GGG | - | chr1_2:2183548-2183567 | None:intergenic | 55.0% |
! | GGCTTCTTTCTCGGCACTGA+GGG | - | chr1_2:2183549-2183568 | None:intergenic | 55.0% |
TGGCTTCTTTCTCGGCACTG+AGG | - | chr1_2:2183550-2183569 | None:intergenic | 55.0% | |
CTTGTCGATAAGCACGACCC+GGG | + | chr1_2:2184172-2184191 | Msa0049030:CDS | 55.0% | |
TGAACAAGAGACCACCCTCC+TGG | - | chr1_2:2185204-2185223 | None:intergenic | 55.0% | |
CTCGAGGTCGAGTTCTTCAG+AGG | + | chr1_2:2185269-2185288 | Msa0049030:intron | 55.0% | |
GAGGTCGAGTTCTTCAGAGG+TGG | + | chr1_2:2185272-2185291 | Msa0049030:intron | 55.0% | |
GAGGTGGAAGAGACTGATGC+AGG | + | chr1_2:2185288-2185307 | Msa0049030:intron | 55.0% | |
GTGGAAGAGACTGATGCAGG+AGG | + | chr1_2:2185291-2185310 | Msa0049030:intron | 55.0% | |
!!! | TTTTCGGTGTCTGGTGGTGC+AGG | - | chr1_2:2183464-2183483 | None:intergenic | 55.0% |
! | GCTTCTTTCTCGGCACTGAG+GGG | - | chr1_2:2183548-2183567 | None:intergenic | 55.0% |
! | GGCTTCTTTCTCGGCACTGA+GGG | - | chr1_2:2183549-2183568 | None:intergenic | 55.0% |
TGGCTTCTTTCTCGGCACTG+AGG | - | chr1_2:2183550-2183569 | None:intergenic | 55.0% | |
CTTGTCGATAAGCACGACCC+GGG | + | chr1_2:2184172-2184191 | Msa0049030:CDS | 55.0% | |
TGAACAAGAGACCACCCTCC+TGG | - | chr1_2:2185204-2185223 | None:intergenic | 55.0% | |
CTCGAGGTCGAGTTCTTCAG+AGG | + | chr1_2:2185269-2185288 | Msa0049030:intron | 55.0% | |
GAGGTCGAGTTCTTCAGAGG+TGG | + | chr1_2:2185272-2185291 | Msa0049030:intron | 55.0% | |
GAGGTGGAAGAGACTGATGC+AGG | + | chr1_2:2185288-2185307 | Msa0049030:intron | 55.0% | |
GTGGAAGAGACTGATGCAGG+AGG | + | chr1_2:2185291-2185310 | Msa0049030:intron | 55.0% | |
! | TTGGGTAGTGGCGGCAGAGT+CGG | - | chr1_2:2183365-2183384 | None:intergenic | 60.0% |
! | TCCGGAGGTTTGGGTAGTGG+CGG | - | chr1_2:2183374-2183393 | None:intergenic | 60.0% |
CGATCCGGAGGTTTGGGTAG+TGG | - | chr1_2:2183377-2183396 | None:intergenic | 60.0% | |
! | TGCAGGAAGTGGTGGAGGCA+AGG | - | chr1_2:2183447-2183466 | None:intergenic | 60.0% |
! | TCTGGTGGTGCAGGAAGTGG+TGG | - | chr1_2:2183455-2183474 | None:intergenic | 60.0% |
! | GTGTCTGGTGGTGCAGGAAG+TGG | - | chr1_2:2183458-2183477 | None:intergenic | 60.0% |
TCTCCATCTGTGGCAGCCTC+CGG | - | chr1_2:2183875-2183894 | None:intergenic | 60.0% | |
CTCAATGGGATCCAGGAGGG+TGG | + | chr1_2:2185190-2185209 | Msa0049030:intron | 60.0% | |
! | TTGGGTAGTGGCGGCAGAGT+CGG | - | chr1_2:2183365-2183384 | None:intergenic | 60.0% |
! | TCCGGAGGTTTGGGTAGTGG+CGG | - | chr1_2:2183374-2183393 | None:intergenic | 60.0% |
CGATCCGGAGGTTTGGGTAG+TGG | - | chr1_2:2183377-2183396 | None:intergenic | 60.0% | |
! | TGCAGGAAGTGGTGGAGGCA+AGG | - | chr1_2:2183447-2183466 | None:intergenic | 60.0% |
! | TCTGGTGGTGCAGGAAGTGG+TGG | - | chr1_2:2183455-2183474 | None:intergenic | 60.0% |
! | GTGTCTGGTGGTGCAGGAAG+TGG | - | chr1_2:2183458-2183477 | None:intergenic | 60.0% |
TCTCCATCTGTGGCAGCCTC+CGG | - | chr1_2:2183875-2183894 | None:intergenic | 60.0% | |
CTCAATGGGATCCAGGAGGG+TGG | + | chr1_2:2185190-2185209 | Msa0049030:intron | 60.0% | |
GCCGCCACTACCCAAACCTC+CGG | + | chr1_2:2183370-2183389 | Msa0049030:CDS | 65.0% | |
GGTGGTGCAGGAAGTGGTGG+AGG | - | chr1_2:2183452-2183471 | None:intergenic | 65.0% | |
CTGTGGCAGCCTCCGGAACA+TGG | - | chr1_2:2183868-2183887 | None:intergenic | 65.0% | |
GTTCCGGAGGCTGCCACAGA+TGG | + | chr1_2:2183869-2183888 | Msa0049030:CDS | 65.0% | |
GGAGGCTGCCACAGATGGAG+AGG | + | chr1_2:2183874-2183893 | Msa0049030:CDS | 65.0% | |
GTTGCTGCAGCAGCTCACGC+CGG | + | chr1_2:2185701-2185720 | Msa0049030:intron | 65.0% | |
TTGCTGCAGCAGCTCACGCC+GGG | + | chr1_2:2185702-2185721 | Msa0049030:intron | 65.0% | |
GCCGCCACTACCCAAACCTC+CGG | + | chr1_2:2183370-2183389 | Msa0049030:CDS | 65.0% | |
GGTGGTGCAGGAAGTGGTGG+AGG | - | chr1_2:2183452-2183471 | None:intergenic | 65.0% | |
CTGTGGCAGCCTCCGGAACA+TGG | - | chr1_2:2183868-2183887 | None:intergenic | 65.0% | |
GTTCCGGAGGCTGCCACAGA+TGG | + | chr1_2:2183869-2183888 | Msa0049030:CDS | 65.0% | |
GGAGGCTGCCACAGATGGAG+AGG | + | chr1_2:2183874-2183893 | Msa0049030:CDS | 65.0% | |
GTTGCTGCAGCAGCTCACGC+CGG | + | chr1_2:2185701-2185720 | Msa0049030:intron | 65.0% | |
TTGCTGCAGCAGCTCACGCC+GGG | + | chr1_2:2185702-2185721 | Msa0049030:intron | 65.0% | |
TGCTGCAGCAGCTCACGCCG+GGG | + | chr1_2:2185703-2185722 | Msa0049030:intron | 70.0% | |
TGCTGCAGCAGCTCACGCCG+GGG | + | chr1_2:2185703-2185722 | Msa0049030:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 2183293 | 2185730 | 2183293 | ID=Msa0049030;Name=Msa0049030 |
chr1_2 | mRNA | 2183293 | 2185730 | 2183293 | ID=Msa0049030-mRNA-1;Parent=Msa0049030;Name=Msa0049030-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|0.5|1|1|2|0|584 |
chr1_2 | exon | 2183293 | 2185027 | 2183293 | ID=Msa0049030-mRNA-1:exon:423;Parent=Msa0049030-mRNA-1 |
chr1_2 | exon | 2185711 | 2185730 | 2185711 | ID=Msa0049030-mRNA-1:exon:424;Parent=Msa0049030-mRNA-1 |
chr1_2 | CDS | 2183293 | 2185027 | 2183293 | ID=Msa0049030-mRNA-1:cds;Parent=Msa0049030-mRNA-1 |
chr1_2 | CDS | 2185711 | 2185730 | 2185711 | ID=Msa0049030-mRNA-1:cds;Parent=Msa0049030-mRNA-1 |
Gene Sequence |
Protein sequence |