Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053130 | XP_003589023.3 | 93.894 | 606 | 28 | 4 | 28 | 625 | 25 | 629 | 0.0 | 1115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053130 | sp|B5X0N6|KEA6_ARATH | 79.362 | 533 | 94 | 5 | 101 | 623 | 69 | 595 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053130 | A0A396JLF0 | 93.894 | 606 | 28 | 4 | 28 | 625 | 25 | 629 | 0.0 | 1115 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005070 | Msa0053130 | 0.951617 | 1.399869e-109 | -8.615850e-47 |
| Msa0053130 | Msa0173010 | 0.841983 | 3.411400e-58 | -8.615850e-47 |
| Msa0053130 | Msa0184280 | 0.922246 | 1.261372e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053130 | MtrunA17_Chr1g0151641 | 93.894 | 606 | 28 | 4 | 28 | 625 | 25 | 629 | 0.0 | 1115 |
| Msa0053130 | MtrunA17_Chr8g0389231 | 74.112 | 591 | 129 | 7 | 54 | 624 | 5 | 591 | 0.0 | 833 |
| Msa0053130 | MtrunA17_Chr6g0475301 | 68.000 | 525 | 149 | 6 | 94 | 602 | 38 | 559 | 0.0 | 666 |
| Msa0053130 | MtrunA17_Chr8g0349591 | 31.215 | 362 | 232 | 6 | 223 | 574 | 594 | 948 | 6.56e-34 | 138 |
| Msa0053130 | MtrunA17_Chr7g0247081 | 30.168 | 358 | 241 | 6 | 223 | 574 | 609 | 963 | 1.71e-29 | 125 |
| Msa0053130 | MtrunA17_Chr4g0049391 | 28.780 | 410 | 242 | 8 | 228 | 609 | 134 | 521 | 4.18e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053130 | AT5G11800.1 | 79.362 | 533 | 94 | 5 | 101 | 623 | 69 | 595 | 0.0 | 822 |
| Msa0053130 | AT2G19600.1 | 77.574 | 544 | 113 | 4 | 87 | 624 | 51 | 591 | 0.0 | 809 |
| Msa0053130 | AT5G51710.1 | 67.761 | 518 | 149 | 5 | 94 | 596 | 34 | 548 | 0.0 | 673 |
| Msa0053130 | AT5G51710.2 | 67.761 | 518 | 149 | 5 | 94 | 596 | 34 | 548 | 0.0 | 673 |
| Msa0053130 | AT4G00630.2 | 29.973 | 367 | 241 | 5 | 223 | 574 | 591 | 956 | 2.44e-33 | 137 |
| Msa0053130 | AT4G00630.1 | 30.919 | 359 | 237 | 6 | 223 | 574 | 591 | 945 | 1.31e-32 | 135 |
| Msa0053130 | AT4G04850.2 | 30.052 | 386 | 234 | 7 | 219 | 577 | 121 | 497 | 1.01e-31 | 131 |
| Msa0053130 | AT1G01790.1 | 30.168 | 358 | 241 | 5 | 223 | 574 | 611 | 965 | 1.16e-31 | 132 |
| Msa0053130 | AT1G01790.2 | 30.168 | 358 | 241 | 5 | 223 | 574 | 611 | 965 | 1.16e-31 | 132 |
| Msa0053130 | AT4G04850.1 | 30.052 | 386 | 234 | 7 | 219 | 577 | 121 | 497 | 3.14e-31 | 129 |
Find 164 sgRNAs with CRISPR-Local
Find 524 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGAACCATGTTGATATTT+TGG | 0.131221 | 1_2:-7549377 | Msa0053130:CDS |
| CTTTGCATTGCTCCCAGTTT+TGG | 0.139277 | 1_2:-7553036 | Msa0053130:CDS |
| CTTCTAGCTGGCTCCATTAT+TGG | 0.163413 | 1_2:-7555120 | Msa0053130:CDS |
| ATAATTGTAGAATGAATTTA+TGG | 0.167284 | 1_2:+7547622 | None:intergenic |
| TAACAATTACCAAATGATTT+TGG | 0.216905 | 1_2:+7557139 | None:intergenic |
| TTTGGTAGCATCGGTTATTT+TGG | 0.221588 | 1_2:-7549359 | Msa0053130:CDS |
| GACAAAGTACCTGTAAAATA+AGG | 0.229903 | 1_2:+7553167 | None:intergenic |
| GTTCGATCTGTTGCTGTTCT+TGG | 0.238691 | 1_2:-7554666 | Msa0053130:CDS |
| AGTGGTGGAGAGGGAGATAT+TGG | 0.246776 | 1_2:+7556997 | None:intergenic |
| ATAATTGCTTCAGTTGTAAA+AGG | 0.249269 | 1_2:-7549316 | Msa0053130:CDS |
| TGGTTGTCTTGGTTAGTATT+TGG | 0.255090 | 1_2:+7547742 | None:intergenic |
| ATTAACAATCATGAGCTTCT+TGG | 0.267217 | 1_2:+7547884 | None:intergenic |
| CAATCTGCTTGCTTGTAGCC+TGG | 0.272823 | 1_2:-7550473 | Msa0053130:CDS |
| AAGCTATATCTGCTGCTTCT+TGG | 0.282785 | 1_2:-7548439 | Msa0053130:CDS |
| CCCCTGTTCTTGACTTCACT+GGG | 0.288238 | 1_2:+7547711 | None:intergenic |
| TCCCCTGTTCTTGACTTCAC+TGG | 0.294860 | 1_2:+7547710 | None:intergenic |
| CCTGAGGTGCCACCCAAAAC+TGG | 0.300678 | 1_2:+7553023 | None:intergenic |
| TCTTATTATGATTACCTTGT+TGG | 0.306362 | 1_2:+7556897 | None:intergenic |
| GCTTCAGTTGTAAAAGGATT+TGG | 0.310695 | 1_2:-7549310 | Msa0053130:CDS |
| AGCTATATCTGCTGCTTCTT+GGG | 0.315855 | 1_2:-7548438 | Msa0053130:CDS |
| AACACTACTAATGCCCTTCA+TGG | 0.322915 | 1_2:-7553208 | Msa0053130:CDS |
| ATTATATGGCAGGTCATTAC+TGG | 0.325742 | 1_2:-7555147 | Msa0053130:intron |
| TTGTTGAAACCTCCCGATTC+AGG | 0.329351 | 1_2:+7556745 | None:intergenic |
| TTCTTGACTTCACTGGGGTT+CGG | 0.353694 | 1_2:+7547717 | None:intergenic |
| CTTGGTAGTTGCTATTGTTT+CGG | 0.364278 | 1_2:-7555318 | Msa0053130:CDS |
| CCTTTCGATCAATTAACATT+GGG | 0.366471 | 1_2:+7555593 | None:intergenic |
| CGGTGCTGCAGCTAGATTTA+CGG | 0.367469 | 1_2:-7555442 | Msa0053130:intron |
| TTGGGGTGTCTTCACCTCTA+TGG | 0.368082 | 1_2:+7555611 | None:intergenic |
| AAAGCCTCCGGGTCCAATAA+TGG | 0.374923 | 1_2:+7555107 | None:intergenic |
| TTCCTTGAATCAGGCTGTAC+TGG | 0.377063 | 1_2:-7555793 | Msa0053130:intron |
| CTTCATGGACAAGTCACAAT+TGG | 0.388980 | 1_2:-7553193 | Msa0053130:CDS |
| TAGCTGCAGCACCGGATACT+TGG | 0.392289 | 1_2:+7555451 | None:intergenic |
| CTTTAACTTCATCAATGAAA+TGG | 0.394888 | 1_2:-7555088 | Msa0053130:CDS |
| TGGTTAGTATTTGGTCAGTT+TGG | 0.397520 | 1_2:+7547751 | None:intergenic |
| GACTTCACTGGGGTTCGGAT+TGG | 0.403485 | 1_2:+7547722 | None:intergenic |
| TCCTTGAAGGATTGTGCTGT+TGG | 0.406340 | 1_2:-7553065 | Msa0053130:intron |
| GAGTAGTGAGCAAGTTGAAA+TGG | 0.406765 | 1_2:+7557223 | None:intergenic |
| TTTAATTACAGTGCCTGAAT+CGG | 0.406779 | 1_2:-7556758 | Msa0053130:intron |
| TAACTTTAAATCCAAGTATC+CGG | 0.413634 | 1_2:-7555462 | Msa0053130:CDS |
| ATTCCTGCTGTAGTGCATCT+TGG | 0.418175 | 1_2:-7548098 | Msa0053130:CDS |
| ACCCCAGTGAAGTCAAGAAC+AGG | 0.420158 | 1_2:-7547713 | Msa0053130:three_prime_UTR |
| TGCAGCGAAAAGATTGCAAA+TGG | 0.422770 | 1_2:+7549444 | None:intergenic |
| CTTACTTGTTCTAGTGTATG+TGG | 0.423068 | 1_2:+7550012 | None:intergenic |
| TGATTCATGTTCATTTCCTC+TGG | 0.424185 | 1_2:-7549396 | Msa0053130:CDS |
| CAACAGTGTTGCAGAACAAC+AGG | 0.443040 | 1_2:-7556725 | Msa0053130:intron |
| AATCTGCTTGCTTGTAGCCT+GGG | 0.444733 | 1_2:-7550472 | Msa0053130:intron |
| ATTGATGAAGTTAAAGCCTC+CGG | 0.446723 | 1_2:+7555095 | None:intergenic |
| TGGGACCACAGCTCTTAGTC+TGG | 0.448458 | 1_2:-7548419 | Msa0053130:intron |
| CGATCTGTTGCTGTTCTTGG+TGG | 0.449460 | 1_2:-7554663 | Msa0053130:CDS |
| AAATAGATGGGCACGTCAGT+AGG | 0.450204 | 1_2:+7547498 | None:intergenic |
| TGCATCTTGGTGTGCTATTG+AGG | 0.450565 | 1_2:-7548085 | Msa0053130:CDS |
| ACAAAGTACCTGTAAAATAA+GGG | 0.453500 | 1_2:+7553168 | None:intergenic |
| ATGTTAACACCAAAATCATT+TGG | 0.455343 | 1_2:-7557148 | Msa0053130:CDS |
| GAACTAGGTTCCTTTGCTGC+TGG | 0.455758 | 1_2:-7550063 | Msa0053130:CDS |
| CAGTGGTGGAGTTGATGAGT+TGG | 0.457520 | 1_2:+7557023 | None:intergenic |
| GCAAGTAACCATCATGGAAC+AGG | 0.458849 | 1_2:+7547777 | None:intergenic |
| GGGGTTCGGATTGGTTGTCT+TGG | 0.460020 | 1_2:+7547731 | None:intergenic |
| ACCTTTCGATCAATTAACAT+TGG | 0.467353 | 1_2:+7555592 | None:intergenic |
| TTAATTACAGTGCCTGAATC+GGG | 0.473538 | 1_2:-7556757 | Msa0053130:intron |
| GATAACCTCCGCTCAGATAG+TGG | 0.481773 | 1_2:-7547931 | Msa0053130:CDS |
| TTATAGATTGATTTCAGACT+TGG | 0.483413 | 1_2:-7555336 | Msa0053130:intron |
| AGGAATGAGGTAGAAGAAGA+AGG | 0.491715 | 1_2:+7557083 | None:intergenic |
| GTGGAAACAGTGGCTCAATT+CGG | 0.495141 | 1_2:-7554853 | Msa0053130:CDS |
| GGAATCAGCTTGAAAAGTAA+AGG | 0.499454 | 1_2:+7548116 | None:intergenic |
| GATGATTGCAACCACTGATC+TGG | 0.499507 | 1_2:-7550037 | Msa0053130:CDS |
| ATTACTGGATATCTTCTAGC+TGG | 0.502180 | 1_2:-7555132 | Msa0053130:CDS |
| CGCCGGCGAAGGTTAGCAGT+TGG | 0.502664 | 1_2:+7557176 | None:intergenic |
| GTTGAAATGGTGAGGGGTCA+AGG | 0.504293 | 1_2:+7557236 | None:intergenic |
| TTCATGGACAAGTCACAATT+GGG | 0.505486 | 1_2:-7553192 | Msa0053130:CDS |
| TCAGCATTCCAATGCTTGAA+AGG | 0.508662 | 1_2:+7549416 | None:intergenic |
| CGTAAATCTAGCTGCAGCAC+CGG | 0.508983 | 1_2:+7555443 | None:intergenic |
| GGAATGTCCATGGCACAGAT+AGG | 0.513270 | 1_2:-7549166 | Msa0053130:CDS |
| TGGTGTTAACATTGCCGCGC+CGG | 0.513443 | 1_2:+7557159 | None:intergenic |
| GAGGGAGATATTGGAGTCAG+TGG | 0.515404 | 1_2:+7557006 | None:intergenic |
| AAGAGCACGATCAATGATAT+CGG | 0.515596 | 1_2:+7556955 | None:intergenic |
| CTGCTGTTGAAGACATAGAA+AGG | 0.516801 | 1_2:+7553368 | None:intergenic |
| GGAGATATTGGAGTCAGTGG+TGG | 0.522237 | 1_2:+7557009 | None:intergenic |
| CTAAGCATAGATTGGATACA+AGG | 0.524112 | 1_2:-7547956 | Msa0053130:intron |
| GACAAATGAACTCTATCAGC+TGG | 0.527577 | 1_2:-7550505 | Msa0053130:CDS |
| ACATCATACATTTATGAGCA+TGG | 0.528476 | 1_2:+7547590 | None:intergenic |
| CATGGAACAGGATCGGATGA+TGG | 0.530931 | 1_2:+7547789 | None:intergenic |
| CTTCATCAATGAAATGGTGC+AGG | 0.531070 | 1_2:-7555082 | Msa0053130:intron |
| ACACCAAGATGCACTACAGC+AGG | 0.532394 | 1_2:+7548095 | None:intergenic |
| TTCAAATCTTCATCTAGTTG+AGG | 0.533473 | 1_2:-7549113 | Msa0053130:intron |
| TTACAACCACTTGGTGTTGG+TGG | 0.533597 | 1_2:-7557119 | Msa0053130:CDS |
| CCCAATGTTAATTGATCGAA+AGG | 0.537649 | 1_2:-7555593 | Msa0053130:intron |
| ATTACCTCTACTGCACTGTC+AGG | 0.538655 | 1_2:+7548053 | None:intergenic |
| CTCTCCACCACTCCTCGTCA+AGG | 0.538720 | 1_2:-7556986 | Msa0053130:CDS |
| TTTCTATTTATGTGCATGTG+TGG | 0.539434 | 1_2:-7554627 | Msa0053130:CDS |
| TTCTCCTGACAGTGCAGTAG+AGG | 0.541819 | 1_2:-7548057 | Msa0053130:intron |
| CTGAGGTGCCACCCAAAACT+GGG | 0.545736 | 1_2:+7553024 | None:intergenic |
| TTCTATGTCTTCAACAGCAG+TGG | 0.546303 | 1_2:-7553365 | Msa0053130:intron |
| GTGAGCAAGTTGAAATGGTG+AGG | 0.550073 | 1_2:+7557228 | None:intergenic |
| AAATAAGCCAACCTTTGTCA+TGG | 0.550185 | 1_2:+7554792 | None:intergenic |
| CATCCGATCCTGTTCCATGA+TGG | 0.550808 | 1_2:-7547785 | Msa0053130:three_prime_UTR |
| TTGACGAGGAGTGGTGGAGA+GGG | 0.550939 | 1_2:+7556988 | None:intergenic |
| CAGTTACAGTTCACCGGCGA+GGG | 0.552036 | 1_2:+7557199 | None:intergenic |
| TGCCAACTGCTAACCTTCGC+CGG | 0.553207 | 1_2:-7557178 | Msa0053130:CDS |
| GTTGATGAGTTGGATTTGAT+CGG | 0.553775 | 1_2:+7557033 | None:intergenic |
| CAATTGTGACTTGTCCATGA+AGG | 0.554654 | 1_2:+7553194 | None:intergenic |
| TAACATTGCCGCGCCGGCGA+AGG | 0.556916 | 1_2:+7557165 | None:intergenic |
| ATCTTCCACTGCATCAATGT+TGG | 0.558281 | 1_2:+7547652 | None:intergenic |
| CATCATACATTTATGAGCAT+GGG | 0.559765 | 1_2:+7547591 | None:intergenic |
| TACATTTATGAGCATGGGAA+AGG | 0.561855 | 1_2:+7547596 | None:intergenic |
| TTGATGAAGTTAAAGCCTCC+GGG | 0.562820 | 1_2:+7555096 | None:intergenic |
| CTGGGATTAAGTCTAGAACT+AGG | 0.566825 | 1_2:-7550078 | Msa0053130:CDS |
| TGTCTCGCACTTGCCTTCCG+TGG | 0.567926 | 1_2:-7550740 | Msa0053130:CDS |
| AATTGTGACTTGTCCATGAA+GGG | 0.569323 | 1_2:+7553195 | None:intergenic |
| AGTTGGCAGTTACAGTTCAC+CGG | 0.573943 | 1_2:+7557193 | None:intergenic |
| GAAGGAACCTTGACGAGGAG+TGG | 0.573992 | 1_2:+7556979 | None:intergenic |
| TGCTCACTACTCTCCCTCGC+CGG | 0.574107 | 1_2:-7557212 | Msa0053130:CDS |
| AGGTCATTTCAACTCCATAG+AGG | 0.574234 | 1_2:-7555625 | Msa0053130:CDS |
| GATGATAAGTCTATCGTCAC+AGG | 0.575405 | 1_2:-7550706 | Msa0053130:intron |
| AATCATCACTCCAGCAGCAA+AGG | 0.576090 | 1_2:+7550053 | None:intergenic |
| TTTCAGTGTAGCGATAAGCT+GGG | 0.576357 | 1_2:-7550096 | Msa0053130:intron |
| TGGTAATTGTTACAACCACT+TGG | 0.578737 | 1_2:-7557128 | Msa0053130:CDS |
| TGAAGTCAAGAACAGGGGAG+GGG | 0.579700 | 1_2:-7547706 | Msa0053130:three_prime_UTR |
| CGGATAGCGAGTGAGGAATG+AGG | 0.579924 | 1_2:+7557070 | None:intergenic |
| AATAGATGGGCACGTCAGTA+GGG | 0.580980 | 1_2:+7547499 | None:intergenic |
| ATCTTGGTGTGCTATTGAGG+TGG | 0.583094 | 1_2:-7548082 | Msa0053130:CDS |
| GTGAAGTCAAGAACAGGGGA+GGG | 0.583187 | 1_2:-7547707 | Msa0053130:three_prime_UTR |
| GATCGGAGTGAGCATGTGAT+CGG | 0.583743 | 1_2:+7557050 | None:intergenic |
| TGGTATGCAAGTAACCATCA+TGG | 0.587337 | 1_2:+7547771 | None:intergenic |
| TTGTTACAACCACTTGGTGT+TGG | 0.587535 | 1_2:-7557122 | Msa0053130:CDS |
| GGAACCTTGACGAGGAGTGG+TGG | 0.589759 | 1_2:+7556982 | None:intergenic |
| CCTTTGTCATGGAAAACTCC+AGG | 0.589774 | 1_2:+7554803 | None:intergenic |
| GCAGCGAAAAGATTGCAAAT+GGG | 0.592154 | 1_2:+7549445 | None:intergenic |
| TCAGTTTAAGCAACCACGGA+AGG | 0.594835 | 1_2:+7550727 | None:intergenic |
| CTTTCGATCAATTAACATTG+GGG | 0.595338 | 1_2:+7555594 | None:intergenic |
| CAAGACCAACATTGATGCAG+TGG | 0.595359 | 1_2:-7547657 | Msa0053130:three_prime_UTR |
| GCTATTGTTTCGGCAACTTG+TGG | 0.596030 | 1_2:-7555308 | Msa0053130:CDS |
| CCCCAGTGAAGTCAAGAACA+GGG | 0.596406 | 1_2:-7547712 | Msa0053130:three_prime_UTR |
| TGTGGTGGTAAAGCTTCAGA+AGG | 0.597905 | 1_2:-7553409 | Msa0053130:CDS |
| CTTGACGAGGAGTGGTGGAG+AGG | 0.604358 | 1_2:+7556987 | None:intergenic |
| TGAGCAAGTTGAAATGGTGA+GGG | 0.608389 | 1_2:+7557229 | None:intergenic |
| ATTGTTTCGGCAACTTGTGG+TGG | 0.611297 | 1_2:-7555305 | Msa0053130:CDS |
| GCTGGCTCCATTATTGGACC+CGG | 0.611628 | 1_2:-7555114 | Msa0053130:CDS |
| AAATTCTCCTATCTGTGCCA+TGG | 0.612084 | 1_2:+7549159 | None:intergenic |
| ATGTGATCGGATAGCGAGTG+AGG | 0.614623 | 1_2:+7557063 | None:intergenic |
| GGCTCCATTATTGGACCCGG+AGG | 0.616606 | 1_2:-7555111 | Msa0053130:CDS |
| TAACCATCATGGAACAGGAT+CGG | 0.617304 | 1_2:+7547782 | None:intergenic |
| TTTATAGGTAGGAATGTCCA+TGG | 0.617601 | 1_2:-7549176 | Msa0053130:intron |
| GCAGTTACAGTTCACCGGCG+AGG | 0.617908 | 1_2:+7557198 | None:intergenic |
| CCCTGTTCTTGACTTCACTG+GGG | 0.618017 | 1_2:+7547712 | None:intergenic |
| ATCATCAGTTTAAGCAACCA+CGG | 0.625233 | 1_2:+7550723 | None:intergenic |
| AGTGAAGTCAAGAACAGGGG+AGG | 0.632173 | 1_2:-7547708 | Msa0053130:three_prime_UTR |
| AAATATCAACATGGTTCCAG+AGG | 0.633087 | 1_2:+7549380 | None:intergenic |
| ATTACAGTGCCTGAATCGGG+AGG | 0.635955 | 1_2:-7556754 | Msa0053130:intron |
| ACGATCAATGATATCGGCGA+AGG | 0.640359 | 1_2:+7556961 | None:intergenic |
| CTGTCACCACCAACACCAAG+TGG | 0.643448 | 1_2:+7557113 | None:intergenic |
| GCTTGCCACTATCTGAGCGG+AGG | 0.648548 | 1_2:+7547926 | None:intergenic |
| ACTGCTAACCTTCGCCGGCG+CGG | 0.649563 | 1_2:-7557173 | Msa0053130:CDS |
| GTGGTGGTAAAGCTTCAGAA+GGG | 0.658870 | 1_2:-7553408 | Msa0053130:CDS |
| CCCAGTGAAGTCAAGAACAG+GGG | 0.691428 | 1_2:-7547711 | Msa0053130:three_prime_UTR |
| TTAATCATTGCACTGCACCA+AGG | 0.692011 | 1_2:-7547866 | Msa0053130:exon |
| TCTTACCAGACTAAGAGCTG+TGG | 0.692418 | 1_2:+7548414 | None:intergenic |
| ATGAACTTAGGTGGAAACAG+TGG | 0.697930 | 1_2:-7554863 | Msa0053130:intron |
| GAGCAAGTTGAAATGGTGAG+GGG | 0.699052 | 1_2:+7557230 | None:intergenic |
| AACGATGATCAAAACCAACA+AGG | 0.699159 | 1_2:-7556911 | Msa0053130:intron |
| ATGCTCATAAATGTATGATG+TGG | 0.705533 | 1_2:-7547588 | Msa0053130:three_prime_UTR |
| TGTATGTGGAGCCAGATCAG+TGG | 0.710307 | 1_2:+7550026 | None:intergenic |
| TCGGCGAAGGAACCTTGACG+AGG | 0.713013 | 1_2:+7556974 | None:intergenic |
| GCTGCTTGCCACTATCTGAG+CGG | 0.714373 | 1_2:+7547923 | None:intergenic |
| ATGCTACCAAAATATCAACA+TGG | 0.721931 | 1_2:+7549371 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATAAAATTTATTAA+CGG | + | chr1_2:7553316-7553335 | None:intergenic | 0.0% |
| !! | TGAAATTATTTGTATTAAAT+AGG | - | chr1_2:7548133-7548152 | Msa0053130:intron | 10.0% |
| !! | TTAAGTCATAAAATTAAATA+AGG | + | chr1_2:7550197-7550216 | None:intergenic | 10.0% |
| !!! | CGTTAATAAATTTTATATTT+TGG | - | chr1_2:7553314-7553333 | Msa0053130:intron | 10.0% |
| !!! | CGTTAATAAATTTTATATTT+TGG | - | chr1_2:7553314-7553333 | Msa0053130:intron | 10.0% |
| !! | ATAAAAATCTATTAATGAGT+TGG | - | chr1_2:7548564-7548583 | Msa0053130:intron | 15.0% |
| !!! | ATATTTATTCTTTTTGCATT+GGG | - | chr1_2:7549906-7549925 | Msa0053130:intron | 15.0% |
| !!! | ATTTTATGACTTAAACTTAA+TGG | - | chr1_2:7550203-7550222 | Msa0053130:intron | 15.0% |
| !!! | TTTTATGACTTAAACTTAAT+GGG | - | chr1_2:7550204-7550223 | Msa0053130:intron | 15.0% |
| !! | AGTATTTCTTTGTATATTTA+AGG | + | chr1_2:7550515-7550534 | None:intergenic | 15.0% |
| !! | AAACATAGTAATTTAATCAA+AGG | - | chr1_2:7551102-7551121 | Msa0053130:intron | 15.0% |
| !! | ACACTCAAATTATATTATAT+GGG | + | chr1_2:7551173-7551192 | None:intergenic | 15.0% |
| !! | AACACTCAAATTATATTATA+TGG | + | chr1_2:7551174-7551193 | None:intergenic | 15.0% |
| !! | TATAATATAATTTGAGTGTT+TGG | - | chr1_2:7551174-7551193 | Msa0053130:intron | 15.0% |
| !!! | TGAATTGAATTTTTTTTGTT+TGG | - | chr1_2:7554141-7554160 | Msa0053130:intron | 15.0% |
| !! | TGCATAAAAATTCTAAATAT+TGG | - | chr1_2:7554856-7554875 | Msa0053130:CDS | 15.0% |
| !! | ATAATTGTAGAATGAATTTA+TGG | + | chr1_2:7557113-7557132 | None:intergenic | 15.0% |
| !! | CAATAAAAAAGAAAATAGAT+GGG | + | chr1_2:7557249-7557268 | None:intergenic | 15.0% |
| !! | ACAATAAAAAAGAAAATAGA+TGG | + | chr1_2:7557250-7557269 | None:intergenic | 15.0% |
| !!! | TAACAATTACCAAATGATTT+TGG | + | chr1_2:7547596-7547615 | None:intergenic | 20.0% |
| !! | ATTTCATGTTTCAACTTATA+AGG | + | chr1_2:7548119-7548138 | None:intergenic | 20.0% |
| !!! | ATGTATTTTTCTAAACTTAC+AGG | - | chr1_2:7549087-7549106 | Msa0053130:intron | 20.0% |
| !!! | TTACATTTTCAACATAAGAT+GGG | - | chr1_2:7549330-7549349 | Msa0053130:CDS | 20.0% |
| !!! | AATATCCTGAAAGTATTATA+TGG | - | chr1_2:7549571-7549590 | Msa0053130:intron | 20.0% |
| !!! | GATATTTATTCTTTTTGCAT+TGG | - | chr1_2:7549905-7549924 | Msa0053130:intron | 20.0% |
| !! | ACATAACAAAAAAGAGAAAA+GGG | + | chr1_2:7549977-7549996 | None:intergenic | 20.0% |
| !! | AACATAACAAAAAAGAGAAA+AGG | + | chr1_2:7549978-7549997 | None:intergenic | 20.0% |
| !! | TTTATGACTTAAACTTAATG+GGG | - | chr1_2:7550205-7550224 | Msa0053130:intron | 20.0% |
| !!! | TTAGTAGATTTTGAAAAAAC+TGG | - | chr1_2:7550616-7550635 | Msa0053130:intron | 20.0% |
| !! | AAACTGTAAAGAAACAATAA+TGG | - | chr1_2:7550799-7550818 | Msa0053130:intron | 20.0% |
| !!! | TTCAGTTTTAATGGATATTA+TGG | - | chr1_2:7551202-7551221 | Msa0053130:intron | 20.0% |
| !!! | TGATCTTTATTTTTCCAATA+TGG | - | chr1_2:7551594-7551613 | Msa0053130:intron | 20.0% |
| !!! | TTTTTTTTGTTTGGTTCTTA+TGG | - | chr1_2:7554150-7554169 | Msa0053130:intron | 20.0% |
| !! | ATACAGAAATGTGAAAAATA+AGG | + | chr1_2:7554297-7554316 | None:intergenic | 20.0% |
| !!! | TTCTAGAGTTTATGTTTAAA+AGG | - | chr1_2:7554465-7554484 | Msa0053130:intron | 20.0% |
| !! | AATATCAATTGATTGTTGAA+TGG | - | chr1_2:7554790-7554809 | Msa0053130:intron | 20.0% |
| !! | AATTAAGAACACAGAAAAAA+TGG | + | chr1_2:7555192-7555211 | None:intergenic | 20.0% |
| !!! | AATGCTTGATAATATATGAA+TGG | - | chr1_2:7555214-7555233 | Msa0053130:intron | 20.0% |
| !! | GATAATATATGAATGGTTTA+TGG | - | chr1_2:7555221-7555240 | Msa0053130:intron | 20.0% |
| !!! | ATTGTCATTTAACTTTGTTT+TGG | - | chr1_2:7555884-7555903 | Msa0053130:intron | 20.0% |
| !! | TATTGAATATAGCTTGAAAT+TGG | + | chr1_2:7555932-7555951 | None:intergenic | 20.0% |
| !!! | ATTGTCATTTAACTTTGTTT+TGG | + | chr1_2:7555884-7555903 | None:intergenic | 20.0% |
| !! | TATTTGAATCAATAGTTACT+AGG | - | chr1_2:7556351-7556370 | Msa0053130:intron | 20.0% |
| !! | ACAAATTATAACAGAACTTA+AGG | + | chr1_2:7556447-7556466 | None:intergenic | 20.0% |
| ! | ATGTTAACACCAAAATCATT+TGG | - | chr1_2:7547584-7547603 | Msa0053130:three_prime_UTR | 25.0% |
| ! | TCTTATTATGATTACCTTGT+TGG | + | chr1_2:7547838-7547857 | None:intergenic | 25.0% |
| ! | AGGTAATCATAATAAGATCT+TGG | - | chr1_2:7547841-7547860 | Msa0053130:three_prime_UTR | 25.0% |
| ! | ATTGCATATTACTTCCATTT+AGG | - | chr1_2:7548055-7548074 | Msa0053130:intron | 25.0% |
| ! | GTAACAAAATCTTTCCTAAA+TGG | + | chr1_2:7548072-7548091 | None:intergenic | 25.0% |
| ! | GATTGTATTGTAGACTTTAA+TGG | - | chr1_2:7548198-7548217 | Msa0053130:intron | 25.0% |
| !!! | AGCTTAATTTATTTTCGTGT+TGG | + | chr1_2:7548314-7548333 | None:intergenic | 25.0% |
| ! | AAATCTAGAGATTAACAAGT+TGG | - | chr1_2:7548525-7548544 | Msa0053130:intron | 25.0% |
| !! | TAATGAGTTGGATGAAAATA+AGG | - | chr1_2:7548576-7548595 | Msa0053130:intron | 25.0% |
| ! | TAAAGTGGAAACATCAAATA+AGG | + | chr1_2:7548656-7548675 | None:intergenic | 25.0% |
| !! | CACTAACTAAATCTTTAAAG+TGG | + | chr1_2:7548671-7548690 | None:intergenic | 25.0% |
| !! | CACTTTAAAGATTTAGTTAG+TGG | - | chr1_2:7548669-7548688 | Msa0053130:intron | 25.0% |
| !!! | TCTTTAGTGTCATTTTTGTT+CGG | + | chr1_2:7548985-7549004 | None:intergenic | 25.0% |
| ! | TAACTTTAAATCCAAGTATC+CGG | - | chr1_2:7549270-7549289 | Msa0053130:intron | 25.0% |
| !! | GTTACATTTTCAACATAAGA+TGG | - | chr1_2:7549329-7549348 | Msa0053130:CDS | 25.0% |
| !! | TACATTTTCAACATAAGATG+GGG | - | chr1_2:7549331-7549350 | Msa0053130:CDS | 25.0% |
| !! | TTATAGATTGATTTCAGACT+TGG | - | chr1_2:7549396-7549415 | Msa0053130:CDS | 25.0% |
| ! | TAGAACAAGAATATTCATAC+CGG | + | chr1_2:7549478-7549497 | None:intergenic | 25.0% |
| !! | CTTTAACTTCATCAATGAAA+TGG | - | chr1_2:7549644-7549663 | Msa0053130:intron | 25.0% |
| !! | TTAGGTTTCTTTTCATAGAT+AGG | + | chr1_2:7549799-7549818 | None:intergenic | 25.0% |
| ! | CATAACAAAAAAGAGAAAAG+GGG | + | chr1_2:7549976-7549995 | None:intergenic | 25.0% |
| !!! | CTTTTTTGTTATGTTTATGC+TGG | - | chr1_2:7549983-7550002 | Msa0053130:intron | 25.0% |
| ! | AAGCATGTATATAGAAAGTA+GGG | + | chr1_2:7550033-7550052 | None:intergenic | 25.0% |
| ! | AGCAATAATTGAGTTTCTAA+GGG | + | chr1_2:7550330-7550349 | None:intergenic | 25.0% |
| ! | AAGCAATAATTGAGTTTCTA+AGG | + | chr1_2:7550331-7550350 | None:intergenic | 25.0% |
| ! | TAGAAACTCAATTATTGCTT+TGG | - | chr1_2:7550331-7550350 | Msa0053130:intron | 25.0% |
| ! | ATCTTTCGACATAAATCATT+TGG | + | chr1_2:7550359-7550378 | None:intergenic | 25.0% |
| ! | TCAGATCATGCAATAAATAA+AGG | + | chr1_2:7550480-7550499 | None:intergenic | 25.0% |
| ! | TGTATATTTAAGGATGACAA+GGG | + | chr1_2:7550505-7550524 | None:intergenic | 25.0% |
| ! | TTGTATATTTAAGGATGACA+AGG | + | chr1_2:7550506-7550525 | None:intergenic | 25.0% |
| !!! | ATACTGATTTTAATACCCAA+AGG | - | chr1_2:7550530-7550549 | Msa0053130:intron | 25.0% |
| ! | AAAGATGAAACTTAACCTTT+GGG | + | chr1_2:7550548-7550567 | None:intergenic | 25.0% |
| ! | AAAAGATGAAACTTAACCTT+TGG | + | chr1_2:7550549-7550568 | None:intergenic | 25.0% |
| ! | TTAACGAATAGAACAGAAAA+CGG | - | chr1_2:7550771-7550790 | Msa0053130:CDS | 25.0% |
| !! | TGTAAAGAAACAATAATGGA+AGG | - | chr1_2:7550803-7550822 | Msa0053130:intron | 25.0% |
| ! | CTTCAATTTGTATTATACCA+GGG | + | chr1_2:7551001-7551020 | None:intergenic | 25.0% |
| ! | AGTAATTTAATCAAAGGAGA+AGG | - | chr1_2:7551108-7551127 | Msa0053130:intron | 25.0% |
| ! | ATCAAGAAAAAGAAACAACA+TGG | + | chr1_2:7551141-7551160 | None:intergenic | 25.0% |
| !!! | TTGGTGTATTTCAGTTTTAA+TGG | - | chr1_2:7551193-7551212 | Msa0053130:intron | 25.0% |
| ! | ACTTTAAATATCTTGTGCAT+CGG | - | chr1_2:7551239-7551258 | Msa0053130:intron | 25.0% |
| ! | AGAAACAGAAAAGTTATTAC+CGG | + | chr1_2:7551462-7551481 | None:intergenic | 25.0% |
| !! | ACAAAGTACCTGTAAAATAA+GGG | + | chr1_2:7551567-7551586 | None:intergenic | 25.0% |
| ! | AGTCTTAATATAGCATTTGT+TGG | + | chr1_2:7551633-7551652 | None:intergenic | 25.0% |
| !!! | GTGAATTTTTTTTTCCTTGA+AGG | - | chr1_2:7551654-7551673 | Msa0053130:intron | 25.0% |
| ! | TATAGAACTTCATAAGTCTT+TGG | - | chr1_2:7551770-7551789 | Msa0053130:intron | 25.0% |
| ! | TGCAACACAAATATTGATAA+GGG | + | chr1_2:7551968-7551987 | None:intergenic | 25.0% |
| ! | TTGCAACACAAATATTGATA+AGG | + | chr1_2:7551969-7551988 | None:intergenic | 25.0% |
| !! | ACATAAATTTGCAGTCATTT+TGG | + | chr1_2:7552037-7552056 | None:intergenic | 25.0% |
| ! | ACAATTGTAGCTAGTATATA+TGG | - | chr1_2:7552329-7552348 | Msa0053130:intron | 25.0% |
| ! | ACAATTGTAGCTAGTATATA+TGG | - | chr1_2:7552329-7552348 | Msa0053130:intron | 25.0% |
| ! | ACAATTGTAGCTAGTATATA+TGG | - | chr1_2:7552329-7552348 | Msa0053130:intron | 25.0% |
| ! | ACAATTGTAGCTAGTATATA+TGG | - | chr1_2:7552329-7552348 | Msa0053130:intron | 25.0% |
| ! | ACAATTGTAGCTAGTATATA+TGG | - | chr1_2:7552329-7552348 | Msa0053130:intron | 25.0% |
| ! | ACAATTGTAGCTAGTATATA+TGG | - | chr1_2:7552329-7552348 | Msa0053130:intron | 25.0% |
| ! | ACAATTGTAGCTAGTATATA+TGG | - | chr1_2:7552329-7552348 | Msa0053130:intron | 25.0% |
| ! | ACAATTGTAGCTAGTATATA+TGG | - | chr1_2:7552329-7552348 | Msa0053130:intron | 25.0% |
| ! | ATGAACTCAAAATGGATAAA+AGG | + | chr1_2:7553848-7553867 | None:intergenic | 25.0% |
| ! | ATCTTCAAATGAACTCAAAA+TGG | + | chr1_2:7553856-7553875 | None:intergenic | 25.0% |
| !! | GGGTATTTTATCATTAAAGA+GGG | + | chr1_2:7554065-7554084 | None:intergenic | 25.0% |
| !! | TGGGTATTTTATCATTAAAG+AGG | + | chr1_2:7554066-7554085 | None:intergenic | 25.0% |
| ! | CTTTAATGATAAAATACCCA+TGG | - | chr1_2:7554066-7554085 | Msa0053130:intron | 25.0% |
| ! | TTCTTAATGTCATACAACAA+TGG | - | chr1_2:7554104-7554123 | Msa0053130:intron | 25.0% |
| !! | CACATTTCTGTATTTTTCTT+TGG | - | chr1_2:7554304-7554323 | Msa0053130:intron | 25.0% |
| !! | GAACAAGTAAGATATTTTAC+AGG | - | chr1_2:7554732-7554751 | Msa0053130:intron | 25.0% |
| ! | CAAAAAGAATTAATGTGTTC+TGG | - | chr1_2:7554990-7555009 | Msa0053130:intron | 25.0% |
| !! | ACATATATGCTCTAAATCTA+TGG | + | chr1_2:7555112-7555131 | None:intergenic | 25.0% |
| ! | ATATGCACTAAACAATCATA+AGG | + | chr1_2:7555161-7555180 | None:intergenic | 25.0% |
| ! | ATAATTGCTTCAGTTGTAAA+AGG | - | chr1_2:7555416-7555435 | Msa0053130:intron | 25.0% |
| ! | ACTTGAATTCATCCATTTAT+AGG | - | chr1_2:7555541-7555560 | Msa0053130:intron | 25.0% |
| ! | ATAGCTTGAAATATAGCTTA+AGG | + | chr1_2:7555965-7555984 | None:intergenic | 25.0% |
| ! | TCAAATATCAGAATCGATAA+AGG | + | chr1_2:7556149-7556168 | None:intergenic | 25.0% |
| ! | CTATATTTCAAGCTTGAAAT+TGG | + | chr1_2:7556201-7556220 | None:intergenic | 25.0% |
| ! | TCAAATATCAGAATCGATAA+AGG | + | chr1_2:7556149-7556168 | None:intergenic | 25.0% |
| ! | TCTGATATTTGATTCATTTC+AGG | - | chr1_2:7556157-7556176 | Msa0053130:intron | 25.0% |
| ! | CTGATATTTGATTCATTTCA+GGG | - | chr1_2:7556158-7556177 | Msa0053130:intron | 25.0% |
| ! | TTTGCTTAAAGATAAGTTAG+TGG | - | chr1_2:7556413-7556432 | Msa0053130:intron | 25.0% |
| !!! | GAACGATGTAATCTTTTTTT+TGG | - | chr1_2:7557170-7557189 | Msa0053130:CDS | 25.0% |
| !! | GTTTTGATCATCGTTTTCTT+CGG | + | chr1_2:7547816-7547835 | None:intergenic | 30.0% |
| TTTAATTACAGTGCCTGAAT+CGG | - | chr1_2:7547974-7547993 | Msa0053130:intron | 30.0% | |
| ATTAGAAGCTAATCCAGAAT+AGG | - | chr1_2:7548164-7548183 | Msa0053130:intron | 30.0% | |
| AGACTTTAATGGCATAATTG+AGG | - | chr1_2:7548209-7548228 | Msa0053130:intron | 30.0% | |
| AATTCCTCTATAGTCTTTCT+AGG | + | chr1_2:7548497-7548516 | None:intergenic | 30.0% | |
| ATATACAACTACAACCAAGT+CGG | + | chr1_2:7548618-7548637 | None:intergenic | 30.0% | |
| GATATGTCGAATGTGTAAAT+GGG | - | chr1_2:7548806-7548825 | Msa0053130:intron | 30.0% | |
| ATATGTCGAATGTGTAAATG+GGG | - | chr1_2:7548807-7548826 | Msa0053130:intron | 30.0% | |
| AATGCAATATACAAGTACCA+TGG | + | chr1_2:7548876-7548895 | None:intergenic | 30.0% | |
| TGCATTTCATAACTTCTCTA+AGG | - | chr1_2:7548890-7548909 | Msa0053130:intron | 30.0% | |
| GCATTTCATAACTTCTCTAA+GGG | - | chr1_2:7548891-7548910 | Msa0053130:intron | 30.0% | |
| CTTTCGATCAATTAACATTG+GGG | + | chr1_2:7549141-7549160 | None:intergenic | 30.0% | |
| CCTTTCGATCAATTAACATT+GGG | + | chr1_2:7549142-7549161 | None:intergenic | 30.0% | |
| ACCTTTCGATCAATTAACAT+TGG | + | chr1_2:7549143-7549162 | None:intergenic | 30.0% | |
| ! | AAAATTGCTGCTCTTCTTTT+TGG | - | chr1_2:7549726-7549745 | Msa0053130:intron | 30.0% |
| AAGAAATGCTGTTAAGTGTT+AGG | + | chr1_2:7549817-7549836 | None:intergenic | 30.0% | |
| TATAGAAAGTAGGGTAATCA+AGG | + | chr1_2:7550024-7550043 | None:intergenic | 30.0% | |
| CAAGCATGTATATAGAAAGT+AGG | + | chr1_2:7550034-7550053 | None:intergenic | 30.0% | |
| TTTCTATTTATGTGCATGTG+TGG | - | chr1_2:7550105-7550124 | Msa0053130:intron | 30.0% | |
| TGATCCAAAGATTTCTTGAT+TGG | + | chr1_2:7550250-7550269 | None:intergenic | 30.0% | |
| TTCAGTTGCAAATGTATGTT+TGG | - | chr1_2:7550288-7550307 | Msa0053130:intron | 30.0% | |
| GCAATAATTGAGTTTCTAAG+GGG | + | chr1_2:7550329-7550348 | None:intergenic | 30.0% | |
| ! | TTCATGCATGTTTGGTTTAT+AGG | + | chr1_2:7550399-7550418 | None:intergenic | 30.0% |
| CTTTCAAATTTGTCATGCTT+GGG | + | chr1_2:7550657-7550676 | None:intergenic | 30.0% | |
| TCTTTCAAATTTGTCATGCT+TGG | + | chr1_2:7550658-7550677 | None:intergenic | 30.0% | |
| CCAGAAAGAAAATGAGAAAA+AGG | + | chr1_2:7550736-7550755 | None:intergenic | 30.0% | |
| ! | CCTTTTTCTCATTTTCTTTC+TGG | - | chr1_2:7550733-7550752 | Msa0053130:CDS | 30.0% |
| ! | GTTTTCTGTTCTATTCGTTA+AGG | + | chr1_2:7550772-7550791 | None:intergenic | 30.0% |
| ACTGAAAATAGAACTAGAAG+AGG | - | chr1_2:7550845-7550864 | Msa0053130:intron | 30.0% | |
| AACTAGATAGAAATCTGGTA+GGG | + | chr1_2:7550954-7550973 | None:intergenic | 30.0% | |
| AAGAGAACTAGATAGAAATC+TGG | + | chr1_2:7550959-7550978 | None:intergenic | 30.0% | |
| CCTTCAATTTGTATTATACC+AGG | + | chr1_2:7551002-7551021 | None:intergenic | 30.0% | |
| CCTGGTATAATACAAATTGA+AGG | - | chr1_2:7550999-7551018 | Msa0053130:intron | 30.0% | |
| AAATTGAAGGTGACATAGAT+GGG | - | chr1_2:7551012-7551031 | Msa0053130:intron | 30.0% | |
| ! | TATGCAATTTTGCAGTTATG+TGG | - | chr1_2:7551305-7551324 | Msa0053130:intron | 30.0% |
| !!! | TTCTTCACTTTTTCTTGTTC+AGG | - | chr1_2:7551478-7551497 | Msa0053130:intron | 30.0% |
| ! | GACAAAGTACCTGTAAAATA+AGG | + | chr1_2:7551568-7551587 | None:intergenic | 30.0% |
| ! | GAGGTATTTATTGTCCATAT+TGG | + | chr1_2:7551611-7551630 | None:intergenic | 30.0% |
| ! | CTTAATATAGCATTTGTTGG+AGG | + | chr1_2:7551630-7551649 | None:intergenic | 30.0% |
| AAACTACGAGAATATGTTCA+TGG | + | chr1_2:7551814-7551833 | None:intergenic | 30.0% | |
| !! | ACTTGTCTCCATTTTTCTTT+GGG | + | chr1_2:7551857-7551876 | None:intergenic | 30.0% |
| !! | AACTTGTCTCCATTTTTCTT+TGG | + | chr1_2:7551858-7551877 | None:intergenic | 30.0% |
| TATTTGTGTTGCAATAGCAA+AGG | - | chr1_2:7551975-7551994 | Msa0053130:intron | 30.0% | |
| TTGCAATAGCAAAGGTTAAA+AGG | - | chr1_2:7551983-7552002 | Msa0053130:intron | 30.0% | |
| TGACTGCAAATTTATGTTAG+CGG | - | chr1_2:7552040-7552059 | Msa0053130:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | - | chr1_2:7552107-7552126 | Msa0053130:intron | 30.0% | |
| !!! | TTTTTGTCTGACTGTTTTTG+TGG | - | chr1_2:7554180-7554199 | Msa0053130:intron | 30.0% |
| ATAACTCATGCCAAAGAAAT+TGG | + | chr1_2:7554500-7554519 | None:intergenic | 30.0% | |
| ! | GTAAGATATTTTACAGGATG+TGG | - | chr1_2:7554738-7554757 | Msa0053130:intron | 30.0% |
| !! | TTACCGTTAGTCTTTCAATA+AGG | + | chr1_2:7554921-7554940 | None:intergenic | 30.0% |
| ACTGATACTACTTAAAAAGG+CGG | + | chr1_2:7554967-7554986 | None:intergenic | 30.0% | |
| CAGACTGATACTACTTAAAA+AGG | + | chr1_2:7554970-7554989 | None:intergenic | 30.0% | |
| AATTCAGAAAAAATGACCAG+TGG | + | chr1_2:7555047-7555066 | None:intergenic | 30.0% | |
| ! | TTTTCTGAATTCTTCGAATG+TGG | - | chr1_2:7555056-7555075 | Msa0053130:intron | 30.0% |
| ATGCTACCAAAATATCAACA+TGG | + | chr1_2:7555364-7555383 | None:intergenic | 30.0% | |
| !!! | TGTTGATATTTTGGTAGCAT+CGG | - | chr1_2:7555364-7555383 | Msa0053130:intron | 30.0% |
| GAATTCATCCATTTATAGGT+AGG | - | chr1_2:7555545-7555564 | Msa0053130:intron | 30.0% | |
| TTCAAATCTTCATCTAGTTG+AGG | - | chr1_2:7555619-7555638 | Msa0053130:CDS | 30.0% | |
| ! | TTTTATGCAACAAGAACTTC+TGG | + | chr1_2:7555725-7555744 | None:intergenic | 30.0% |
| GAAGTTCTTGTTGCATAAAA+TGG | - | chr1_2:7555725-7555744 | Msa0053130:intron | 30.0% | |
| TGACTTATTAGCTCATTAGT+TGG | - | chr1_2:7555791-7555810 | Msa0053130:intron | 30.0% | |
| TGACTTATTAGCTCATTAGT+TGG | + | chr1_2:7555791-7555810 | None:intergenic | 30.0% | |
| ! | TAAAGATAAGTTAGTGGACA+AGG | - | chr1_2:7556419-7556438 | Msa0053130:intron | 30.0% |
| !!! | CACATTTTTTCAAACCAAAC+AGG | + | chr1_2:7556517-7556536 | None:intergenic | 30.0% |
| AAATGCGTTCAGAAATTACT+CGG | + | chr1_2:7556581-7556600 | None:intergenic | 30.0% | |
| AATGGAAATAACCAAATGAC+AGG | + | chr1_2:7556707-7556726 | None:intergenic | 30.0% | |
| AAACAAAAGAATCACGCAAA+TGG | + | chr1_2:7556725-7556744 | None:intergenic | 30.0% | |
| ! | TTTGTTGTCTAAGCATAGAT+TGG | - | chr1_2:7556768-7556787 | Msa0053130:intron | 30.0% |
| ATTAACAATCATGAGCTTCT+TGG | + | chr1_2:7556851-7556870 | None:intergenic | 30.0% | |
| AAATAATGACGCGCAAAAAT+TGG | + | chr1_2:7556897-7556916 | None:intergenic | 30.0% | |
| !! | ATTATTTTTCGACAGGGTTA+TGG | - | chr1_2:7556910-7556929 | Msa0053130:intron | 30.0% |
| CATCATACATTTATGAGCAT+GGG | + | chr1_2:7557144-7557163 | None:intergenic | 30.0% | |
| ACATCATACATTTATGAGCA+TGG | + | chr1_2:7557145-7557164 | None:intergenic | 30.0% | |
| ATGCTCATAAATGTATGATG+TGG | - | chr1_2:7557144-7557163 | Msa0053130:CDS | 30.0% | |
| !!! | CGATGTAATCTTTTTTTTGG+TGG | - | chr1_2:7557173-7557192 | Msa0053130:CDS | 30.0% |
| !!! | TGTAATCTTTTTTTTGGTGG+TGG | - | chr1_2:7557176-7557195 | Msa0053130:CDS | 30.0% |
| TGGTAATTGTTACAACCACT+TGG | - | chr1_2:7547604-7547623 | Msa0053130:three_prime_UTR | 35.0% | |
| ! | GTTGATGAGTTGGATTTGAT+CGG | + | chr1_2:7547702-7547721 | None:intergenic | 35.0% |
| ! | AAGAGCACGATCAATGATAT+CGG | + | chr1_2:7547780-7547799 | None:intergenic | 35.0% |
| AACGATGATCAAAACCAACA+AGG | - | chr1_2:7547821-7547840 | Msa0053130:three_prime_UTR | 35.0% | |
| TTAATTACAGTGCCTGAATC+GGG | - | chr1_2:7547975-7547994 | Msa0053130:intron | 35.0% | |
| TCTCTGACTAATACCTATTC+TGG | + | chr1_2:7548180-7548199 | None:intergenic | 35.0% | |
| AATTAAGCTTAGCTGAGATG+AGG | - | chr1_2:7548325-7548344 | Msa0053130:intron | 35.0% | |
| AGCCACTATAGTAGAAAAGA+TGG | - | chr1_2:7548430-7548449 | Msa0053130:CDS | 35.0% | |
| ! | CACCATCTTTTCTACTATAG+TGG | + | chr1_2:7548435-7548454 | None:intergenic | 35.0% |
| CACTATAGTAGAAAAGATGG+TGG | - | chr1_2:7548433-7548452 | Msa0053130:CDS | 35.0% | |
| !! | AGAAAAGATGGTGGAAACTA+AGG | - | chr1_2:7548442-7548461 | Msa0053130:CDS | 35.0% |
| AAGACCTAGAAAGACTATAG+AGG | - | chr1_2:7548490-7548509 | Msa0053130:intron | 35.0% | |
| GGAAACATCAAATAAGGTGA+AGG | + | chr1_2:7548650-7548669 | None:intergenic | 35.0% | |
| GCAGACAAAGAATCTGATTT+CGG | + | chr1_2:7548700-7548719 | None:intergenic | 35.0% | |
| ATGTGTTGAATGTGTGAATG+CGG | + | chr1_2:7548732-7548751 | None:intergenic | 35.0% | |
| TTACACATTCGACATATCCA+CGG | + | chr1_2:7548804-7548823 | None:intergenic | 35.0% | |
| GGATATGTCGAATGTGTAAA+TGG | - | chr1_2:7548805-7548824 | Msa0053130:intron | 35.0% | |
| CCCAATGTTAATTGATCGAA+AGG | - | chr1_2:7549139-7549158 | Msa0053130:CDS | 35.0% | |
| GTGTAAATTGTGCATCTTTC+AGG | - | chr1_2:7549228-7549247 | Msa0053130:intron | 35.0% | |
| ! | CTTGGTAGTTGCTATTGTTT+CGG | - | chr1_2:7549414-7549433 | Msa0053130:CDS | 35.0% |
| TTCTTGACAAACGCAATCTT+AGG | - | chr1_2:7549505-7549524 | Msa0053130:intron | 35.0% | |
| !! | TCCTGAAAGTATTATATGGC+AGG | - | chr1_2:7549575-7549594 | Msa0053130:intron | 35.0% |
| ACCTGCCATATAATACTTTC+AGG | + | chr1_2:7549579-7549598 | None:intergenic | 35.0% | |
| ATTATATGGCAGGTCATTAC+TGG | - | chr1_2:7549585-7549604 | Msa0053130:intron | 35.0% | |
| ATTACTGGATATCTTCTAGC+TGG | - | chr1_2:7549600-7549619 | Msa0053130:intron | 35.0% | |
| ATTGATGAAGTTAAAGCCTC+CGG | + | chr1_2:7549640-7549659 | None:intergenic | 35.0% | |
| !!! | TTTTTAGAGTTCAGCTCAGT+TGG | - | chr1_2:7549753-7549772 | Msa0053130:intron | 35.0% |
| AAATAAGCCAACCTTTGTCA+TGG | + | chr1_2:7549943-7549962 | None:intergenic | 35.0% | |
| !! | CATGTGTGGTTTTACTGTAT+CGG | - | chr1_2:7550119-7550138 | Msa0053130:intron | 35.0% |
| CAAGCCAATCAAGAAATCTT+TGG | - | chr1_2:7550243-7550262 | Msa0053130:intron | 35.0% | |
| TGGATCATGTAGTGTATGTT+TGG | - | chr1_2:7550263-7550282 | Msa0053130:intron | 35.0% | |
| AAGACAACTTCATGCATGTT+TGG | + | chr1_2:7550407-7550426 | None:intergenic | 35.0% | |
| AATTCTGTGATAGCAAGGTT+TGG | + | chr1_2:7550918-7550937 | None:intergenic | 35.0% | |
| GAACTAGATAGAAATCTGGT+AGG | + | chr1_2:7550955-7550974 | None:intergenic | 35.0% | |
| AGGGTGTAGAATATATCTAC+AGG | + | chr1_2:7550982-7551001 | None:intergenic | 35.0% | |
| TGTAGATATATTCTACACCC+TGG | - | chr1_2:7550981-7551000 | Msa0053130:intron | 35.0% | |
| CAAATTGAAGGTGACATAGA+TGG | - | chr1_2:7551011-7551030 | Msa0053130:intron | 35.0% | |
| AATTGAAGGTGACATAGATG+GGG | - | chr1_2:7551013-7551032 | Msa0053130:intron | 35.0% | |
| TTAAATATCTTGTGCATCGG+TGG | - | chr1_2:7551242-7551261 | Msa0053130:intron | 35.0% | |
| GTAGCATTCGAAATGTCATA+TGG | + | chr1_2:7551274-7551293 | None:intergenic | 35.0% | |
| ! | CAGTGTGTGCACTTTAAAAA+TGG | + | chr1_2:7551422-7551441 | None:intergenic | 35.0% |
| ! | TCAGGTCTTGAAGTTTTTGA+TGG | - | chr1_2:7551496-7551515 | Msa0053130:intron | 35.0% |
| ! | AATTGTGACTTGTCCATGAA+GGG | + | chr1_2:7551540-7551559 | None:intergenic | 35.0% |
| TTCATGGACAAGTCACAATT+GGG | - | chr1_2:7551540-7551559 | Msa0053130:intron | 35.0% | |
| !!! | AATTGGGACCCTTATTTTAC+AGG | - | chr1_2:7551556-7551575 | Msa0053130:intron | 35.0% |
| GAGAAGAGTTTATAAAGAGG+AGG | - | chr1_2:7552110-7552129 | Msa0053130:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+TGG | + | chr1_2:7552154-7552173 | None:intergenic | 35.0% | |
| TGTAAACTGTCACAATATCG+AGG | + | chr1_2:7552178-7552197 | None:intergenic | 35.0% | |
| TACACTCTTGAAAAGACTCT+TGG | - | chr1_2:7552194-7552213 | Msa0053130:intron | 35.0% | |
| AACACACATATCAAGGAAAG+TGG | + | chr1_2:7553263-7553282 | None:intergenic | 35.0% | |
| GTCACTTAACACACATATCA+AGG | + | chr1_2:7553270-7553289 | None:intergenic | 35.0% | |
| AACACACATATCAAGGAAAG+TGG | + | chr1_2:7553263-7553282 | None:intergenic | 35.0% | |
| GTCACTTAACACACATATCA+AGG | + | chr1_2:7553270-7553289 | None:intergenic | 35.0% | |
| AACACACATATCAAGGAAAG+TGG | + | chr1_2:7553263-7553282 | None:intergenic | 35.0% | |
| GTCACTTAACACACATATCA+AGG | + | chr1_2:7553270-7553289 | None:intergenic | 35.0% | |
| TGATACTCCTTTCTTAATCC+AGG | - | chr1_2:7553929-7553948 | Msa0053130:intron | 35.0% | |
| ATCATCAGTTTAAGCAACCA+CGG | + | chr1_2:7554012-7554031 | None:intergenic | 35.0% | |
| TGATAAAATACCCATGGAAG+AGG | - | chr1_2:7554072-7554091 | Msa0053130:intron | 35.0% | |
| TAATGTCATACAACAATGGC+AGG | - | chr1_2:7554108-7554127 | Msa0053130:intron | 35.0% | |
| AATGTCATACAACAATGGCA+GGG | - | chr1_2:7554109-7554128 | Msa0053130:intron | 35.0% | |
| !!! | TGCTTCACCTTATTTTCAGA+GGG | - | chr1_2:7554389-7554408 | Msa0053130:intron | 35.0% |
| ! | GCCTTTTGTACCAATTTCTT+TGG | - | chr1_2:7554487-7554506 | Msa0053130:intron | 35.0% |
| GCCAAAGAAATTGGTACAAA+AGG | + | chr1_2:7554491-7554510 | None:intergenic | 35.0% | |
| CTTACTTGTTCTAGTGTATG+TGG | + | chr1_2:7554723-7554742 | None:intergenic | 35.0% | |
| CCACCTTATTGAAAGACTAA+CGG | - | chr1_2:7554915-7554934 | Msa0053130:intron | 35.0% | |
| ! | GATTTTCCTTCTTTACAAGC+TGG | - | chr1_2:7555133-7555152 | Msa0053130:CDS | 35.0% |
| TGATTCATGTTCATTTCCTC+TGG | - | chr1_2:7555336-7555355 | Msa0053130:intron | 35.0% | |
| AAATATCAACATGGTTCCAG+AGG | + | chr1_2:7555355-7555374 | None:intergenic | 35.0% | |
| ! | CTGGAACCATGTTGATATTT+TGG | - | chr1_2:7555355-7555374 | Msa0053130:intron | 35.0% |
| !!! | TTTGGTAGCATCGGTTATTT+TGG | - | chr1_2:7555373-7555392 | Msa0053130:intron | 35.0% |
| GCTTCAGTTGTAAAAGGATT+TGG | - | chr1_2:7555422-7555441 | Msa0053130:intron | 35.0% | |
| TGGACATTCCTACCTATAAA+TGG | + | chr1_2:7555556-7555575 | None:intergenic | 35.0% | |
| TTTATAGGTAGGAATGTCCA+TGG | - | chr1_2:7555556-7555575 | Msa0053130:intron | 35.0% | |
| AGTTGAGGTTAGTGACATTA+TGG | - | chr1_2:7555634-7555653 | Msa0053130:intron | 35.0% | |
| ATATCAGAATCGATAAAGGC+TGG | + | chr1_2:7556145-7556164 | None:intergenic | 35.0% | |
| ATATCAGAATCGATAAAGGC+TGG | + | chr1_2:7556145-7556164 | None:intergenic | 35.0% | |
| AATGCGTTCAGAAATTACTC+GGG | + | chr1_2:7556580-7556599 | None:intergenic | 35.0% | |
| GGAATCAGCTTGAAAAGTAA+AGG | + | chr1_2:7556619-7556638 | None:intergenic | 35.0% | |
| CTAAGCATAGATTGGATACA+AGG | - | chr1_2:7556776-7556795 | Msa0053130:intron | 35.0% | |
| CGCAAAAATTGGAAATTCCT+TGG | + | chr1_2:7556886-7556905 | None:intergenic | 35.0% | |
| TGGTTAGTATTTGGTCAGTT+TGG | + | chr1_2:7556984-7557003 | None:intergenic | 35.0% | |
| TGGTTGTCTTGGTTAGTATT+TGG | + | chr1_2:7556993-7557012 | None:intergenic | 35.0% | |
| TACATTTATGAGCATGGGAA+AGG | + | chr1_2:7557139-7557158 | None:intergenic | 35.0% | |
| ! | TGAGCAAGTTGAAATGGTGA+GGG | + | chr1_2:7547506-7547525 | None:intergenic | 40.0% |
| ! | GAGTAGTGAGCAAGTTGAAA+TGG | + | chr1_2:7547512-7547531 | None:intergenic | 40.0% |
| !! | TTGTTACAACCACTTGGTGT+TGG | - | chr1_2:7547610-7547629 | Msa0053130:three_prime_UTR | 40.0% |
| AGGAATGAGGTAGAAGAAGA+AGG | + | chr1_2:7547652-7547671 | None:intergenic | 40.0% | |
| ! | TTTTATCCATGTAGCCGACT+TGG | - | chr1_2:7548601-7548620 | Msa0053130:intron | 40.0% |
| TCACACATTCAACACATCTG+CGG | - | chr1_2:7548735-7548754 | Msa0053130:intron | 40.0% | |
| ! | TGGGGCAAATTTTAGACTAC+AGG | - | chr1_2:7548825-7548844 | Msa0053130:intron | 40.0% |
| ! | GGGGCAAATTTTAGACTACA+GGG | - | chr1_2:7548826-7548845 | Msa0053130:intron | 40.0% |
| TAGTCCTCTTTCCTTGAATC+AGG | - | chr1_2:7548930-7548949 | Msa0053130:intron | 40.0% | |
| !!! | ATTTTTGTTCGGTGTGACTC+TGG | + | chr1_2:7548974-7548993 | None:intergenic | 40.0% |
| AGGTCATTTCAACTCCATAG+AGG | - | chr1_2:7549107-7549126 | Msa0053130:intron | 40.0% | |
| TTGATGAAGTTAAAGCCTCC+GGG | + | chr1_2:7549639-7549658 | None:intergenic | 40.0% | |
| CTTCATCAATGAAATGGTGC+AGG | - | chr1_2:7549650-7549669 | Msa0053130:intron | 40.0% | |
| AATGAAATGGTGCAGGTATC+TGG | - | chr1_2:7549657-7549676 | Msa0053130:intron | 40.0% | |
| ATGCAAGCCTGAATGAACTT+AGG | - | chr1_2:7549857-7549876 | Msa0053130:intron | 40.0% | |
| GTTTCCACCTAAGTTCATTC+AGG | + | chr1_2:7549867-7549886 | None:intergenic | 40.0% | |
| ATGAACTTAGGTGGAAACAG+TGG | - | chr1_2:7549869-7549888 | Msa0053130:intron | 40.0% | |
| ! | TATTCTTTTTGCATTGGGCC+TGG | - | chr1_2:7549911-7549930 | Msa0053130:intron | 40.0% |
| ! | GAGTTTTCCATGACAAAGGT+TGG | - | chr1_2:7549933-7549952 | Msa0053130:intron | 40.0% |
| ! | TTCTAAGGGGCATACATACT+TGG | + | chr1_2:7550316-7550335 | None:intergenic | 40.0% |
| CAAGTCAGACTAATCTCACA+TGG | + | chr1_2:7550450-7550469 | None:intergenic | 40.0% | |
| !! | CATGTGAGATTAGTCTGACT+TGG | - | chr1_2:7550448-7550467 | Msa0053130:intron | 40.0% |
| AGTGGAATTCTGTGATAGCA+AGG | + | chr1_2:7550923-7550942 | None:intergenic | 40.0% | |
| AGATAGAAATCTGGTAGGGA+TGG | + | chr1_2:7550950-7550969 | None:intergenic | 40.0% | |
| ATTGAAGGTGACATAGATGG+GGG | - | chr1_2:7551014-7551033 | Msa0053130:intron | 40.0% | |
| ! | GCAATTTTGCAGTTATGTGG+TGG | - | chr1_2:7551308-7551327 | Msa0053130:intron | 40.0% |
| ! | GCTTCAGAAGGGATTTTTGT+TGG | - | chr1_2:7551335-7551354 | Msa0053130:intron | 40.0% |
| CTGCTGTTGAAGACATAGAA+AGG | + | chr1_2:7551367-7551386 | None:intergenic | 40.0% | |
| TTCTATGTCTTCAACAGCAG+TGG | - | chr1_2:7551367-7551386 | Msa0053130:intron | 40.0% | |
| TGTCTAATGTACTTCCTTGC+CGG | - | chr1_2:7551440-7551459 | Msa0053130:intron | 40.0% | |
| CAGAAAAGTTATTACCGGCA+AGG | + | chr1_2:7551457-7551476 | None:intergenic | 40.0% | |
| AACACTACTAATGCCCTTCA+TGG | - | chr1_2:7551524-7551543 | Msa0053130:intron | 40.0% | |
| ! | CAATTGTGACTTGTCCATGA+AGG | + | chr1_2:7551541-7551560 | None:intergenic | 40.0% |
| CTTCATGGACAAGTCACAAT+TGG | - | chr1_2:7551539-7551558 | Msa0053130:intron | 40.0% | |
| ! | TTTGCATTGCTCCCAGTTTT+GGG | - | chr1_2:7551697-7551716 | Msa0053130:intron | 40.0% |
| GAATCCTATCTATCCGATGT+GGG | + | chr1_2:7552088-7552107 | None:intergenic | 40.0% | |
| AGAATCCTATCTATCCGATG+TGG | + | chr1_2:7552089-7552108 | None:intergenic | 40.0% | |
| !! | CCTTACAAAACTGGCTTGTA+TGG | + | chr1_2:7552145-7552164 | None:intergenic | 40.0% |
| !! | CCATACAAGCCAGTTTTGTA+AGG | - | chr1_2:7552142-7552161 | Msa0053130:intron | 40.0% |
| CTCTTGGTTGAAAAGACTCT+TGG | - | chr1_2:7552210-7552229 | Msa0053130:intron | 40.0% | |
| ACTCCTTTCTTAATCCAGGT+TGG | - | chr1_2:7553933-7553952 | Msa0053130:intron | 40.0% | |
| TCACCAACCTGGATTAAGAA+AGG | + | chr1_2:7553939-7553958 | None:intergenic | 40.0% | |
| GATGATAAGTCTATCGTCAC+AGG | - | chr1_2:7554026-7554045 | Msa0053130:intron | 40.0% | |
| AAACAAGCAACCTCTTCCAT+GGG | + | chr1_2:7554085-7554104 | None:intergenic | 40.0% | |
| AAAACAAGCAACCTCTTCCA+TGG | + | chr1_2:7554086-7554105 | None:intergenic | 40.0% | |
| ATGTCATACAACAATGGCAG+GGG | - | chr1_2:7554110-7554129 | Msa0053130:intron | 40.0% | |
| TTCATTTGTCTGCACGAACA+TGG | + | chr1_2:7554217-7554236 | None:intergenic | 40.0% | |
| GACAAATGAACTCTATCAGC+TGG | - | chr1_2:7554227-7554246 | Msa0053130:intron | 40.0% | |
| ATAAGGAAGAGAACAAACCC+AGG | + | chr1_2:7554280-7554299 | None:intergenic | 40.0% | |
| !!! | GTGCTTCACCTTATTTTCAG+AGG | - | chr1_2:7554388-7554407 | Msa0053130:intron | 40.0% |
| GCAAGTGCAATCAGCTAAAA+AGG | + | chr1_2:7554605-7554624 | None:intergenic | 40.0% | |
| ! | TTTTCAGTGTAGCGATAAGC+TGG | - | chr1_2:7554635-7554654 | Msa0053130:CDS | 40.0% |
| TTTCAGTGTAGCGATAAGCT+GGG | - | chr1_2:7554636-7554655 | Msa0053130:CDS | 40.0% | |
| ! | CTGGGATTAAGTCTAGAACT+AGG | - | chr1_2:7554654-7554673 | Msa0053130:CDS | 40.0% |
| AAATGCATGTAGTGTGAGCA+TGG | - | chr1_2:7554762-7554781 | Msa0053130:intron | 40.0% | |
| !! | CCGTTAGTCTTTCAATAAGG+TGG | + | chr1_2:7554918-7554937 | None:intergenic | 40.0% |
| GAAAGACTAACGGTAATGAG+TGG | - | chr1_2:7554925-7554944 | Msa0053130:intron | 40.0% | |
| ! | AAATGACCAGTGGAAGTACA+TGG | + | chr1_2:7555037-7555056 | None:intergenic | 40.0% |
| GCAGCGAAAAGATTGCAAAT+GGG | + | chr1_2:7555290-7555309 | None:intergenic | 40.0% | |
| TGCAGCGAAAAGATTGCAAA+TGG | + | chr1_2:7555291-7555310 | None:intergenic | 40.0% | |
| ! | GCACTTTTCCTTTCAAGCAT+TGG | - | chr1_2:7555308-7555327 | Msa0053130:CDS | 40.0% |
| TCAGCATTCCAATGCTTGAA+AGG | + | chr1_2:7555319-7555338 | None:intergenic | 40.0% | |
| AAATTCTCCTATCTGTGCCA+TGG | + | chr1_2:7555576-7555595 | None:intergenic | 40.0% | |
| !! | CTCAGACTTGTTGCATTGAA+TGG | - | chr1_2:7555761-7555780 | Msa0053130:CDS | 40.0% |
| ! | AAGCTATATCTGCTGCTTCT+TGG | - | chr1_2:7556293-7556312 | Msa0053130:intron | 40.0% |
| ! | AGCTATATCTGCTGCTTCTT+GGG | - | chr1_2:7556294-7556313 | Msa0053130:intron | 40.0% |
| TAGAAAGCTGTATAGACCAG+AGG | + | chr1_2:7556389-7556408 | None:intergenic | 40.0% | |
| ! | ACTGTCGTATGGGAGTATAT+GGG | + | chr1_2:7556473-7556492 | None:intergenic | 40.0% |
| ATGCGTTCAGAAATTACTCG+GGG | + | chr1_2:7556579-7556598 | None:intergenic | 40.0% | |
| ATTTCTGAACGCATTTCTGC+AGG | - | chr1_2:7556585-7556604 | Msa0053130:intron | 40.0% | |
| AGAGGTAATCACCTGTCATT+TGG | - | chr1_2:7556693-7556712 | Msa0053130:intron | 40.0% | |
| TTAATCATTGCACTGCACCA+AGG | - | chr1_2:7556866-7556885 | Msa0053130:intron | 40.0% | |
| !! | CGCGTCATTATTTTTCGACA+GGG | - | chr1_2:7556904-7556923 | Msa0053130:intron | 40.0% |
| TAACCATCATGGAACAGGAT+CGG | + | chr1_2:7556953-7556972 | None:intergenic | 40.0% | |
| TGGTATGCAAGTAACCATCA+TGG | + | chr1_2:7556964-7556983 | None:intergenic | 40.0% | |
| ATCTTCCACTGCATCAATGT+TGG | + | chr1_2:7557083-7557102 | None:intergenic | 40.0% | |
| ! | GAGCAAGTTGAAATGGTGAG+GGG | + | chr1_2:7547505-7547524 | None:intergenic | 45.0% |
| ! | GTGAGCAAGTTGAAATGGTG+AGG | + | chr1_2:7547507-7547526 | None:intergenic | 45.0% |
| AGTTGGCAGTTACAGTTCAC+CGG | + | chr1_2:7547542-7547561 | None:intergenic | 45.0% | |
| !! | TTACAACCACTTGGTGTTGG+TGG | - | chr1_2:7547613-7547632 | Msa0053130:three_prime_UTR | 45.0% |
| ACGATCAATGATATCGGCGA+AGG | + | chr1_2:7547774-7547793 | None:intergenic | 45.0% | |
| TTGTTGAAACCTCCCGATTC+AGG | + | chr1_2:7547990-7548009 | None:intergenic | 45.0% | |
| CAACAGTGTTGCAGAACAAC+AGG | - | chr1_2:7548007-7548026 | Msa0053130:intron | 45.0% | |
| ! | GTTGTACCAGACAGAGTGTT+AGG | - | chr1_2:7548278-7548297 | Msa0053130:intron | 45.0% |
| TTACTGCCTAACACTCTGTC+TGG | + | chr1_2:7548287-7548306 | None:intergenic | 45.0% | |
| CTGAGATGAGGATGTTGTGT+TGG | - | chr1_2:7548337-7548356 | Msa0053130:intron | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | - | chr1_2:7548345-7548364 | Msa0053130:intron | 45.0% | |
| ATTAGAGAGAGACAGAGAGC+TGG | - | chr1_2:7548402-7548421 | Msa0053130:intron | 45.0% | |
| TTAGAGAGAGACAGAGAGCT+GGG | - | chr1_2:7548403-7548422 | Msa0053130:intron | 45.0% | |
| !! | AGATGGTGGAAACTAAGGTC+AGG | - | chr1_2:7548447-7548466 | Msa0053130:intron | 45.0% |
| CGGTCTCCAAGCTTGAAATA+TGG | - | chr1_2:7548755-7548774 | Msa0053130:intron | 45.0% | |
| GACGGTCCATATTTCAAGCT+TGG | + | chr1_2:7548764-7548783 | None:intergenic | 45.0% | |
| ! | GTTGCTGGATTTAGTTCGGA+CGG | + | chr1_2:7548782-7548801 | None:intergenic | 45.0% |
| CACGGTTGCTGGATTTAGTT+CGG | + | chr1_2:7548786-7548805 | None:intergenic | 45.0% | |
| ! | TTTTAGACTACAGGGAACCC+TGG | - | chr1_2:7548834-7548853 | Msa0053130:intron | 45.0% |
| GATGCATATTCACCGAACCA+GGG | + | chr1_2:7548854-7548873 | None:intergenic | 45.0% | |
| ! | GTTCGGTGAATATGCATCCA+TGG | - | chr1_2:7548856-7548875 | Msa0053130:intron | 45.0% |
| ACAGCCTGATTCAAGGAAAG+AGG | + | chr1_2:7548937-7548956 | None:intergenic | 45.0% | |
| TTCCTTGAATCAGGCTGTAC+TGG | - | chr1_2:7548939-7548958 | Msa0053130:intron | 45.0% | |
| GCTATTGTTTCGGCAACTTG+TGG | - | chr1_2:7549424-7549443 | Msa0053130:CDS | 45.0% | |
| ATTGTTTCGGCAACTTGTGG+TGG | - | chr1_2:7549427-7549446 | Msa0053130:CDS | 45.0% | |
| !! | GTTTGCTTTTGCTGGACAAC+CGG | - | chr1_2:7549456-7549475 | Msa0053130:intron | 45.0% |
| ! | CTTCTAGCTGGCTCCATTAT+TGG | - | chr1_2:7549612-7549631 | Msa0053130:intron | 45.0% |
| CAAGCCTGAATGAACTTAGG+TGG | - | chr1_2:7549860-7549879 | Msa0053130:intron | 45.0% | |
| GTGGAAACAGTGGCTCAATT+CGG | - | chr1_2:7549879-7549898 | Msa0053130:intron | 45.0% | |
| CCTTTGTCATGGAAAACTCC+AGG | + | chr1_2:7549932-7549951 | None:intergenic | 45.0% | |
| ! | CCTGGAGTTTTCCATGACAA+AGG | - | chr1_2:7549929-7549948 | Msa0053130:intron | 45.0% |
| ! | GTTCGATCTGTTGCTGTTCT+TGG | - | chr1_2:7550066-7550085 | Msa0053130:CDS | 45.0% |
| !! | GAGAGTGCCTGATTGAATGA+AGG | - | chr1_2:7550581-7550600 | Msa0053130:intron | 45.0% |
| GCACAGACCTTCATTCAATC+AGG | + | chr1_2:7550591-7550610 | None:intergenic | 45.0% | |
| TCATGCTTGGGACAATCAAG+CGG | + | chr1_2:7550645-7550664 | None:intergenic | 45.0% | |
| AGTTCAGCTCATGGAGAAGT+GGG | + | chr1_2:7550880-7550899 | None:intergenic | 45.0% | |
| TAGTTCAGCTCATGGAGAAG+TGG | + | chr1_2:7550881-7550900 | None:intergenic | 45.0% | |
| CTGTGTAGTAGTTCAGCTCA+TGG | + | chr1_2:7550889-7550908 | None:intergenic | 45.0% | |
| TTGAAGGTGACATAGATGGG+GGG | - | chr1_2:7551015-7551034 | Msa0053130:intron | 45.0% | |
| TGTGGTGGTAAAGCTTCAGA+AGG | - | chr1_2:7551323-7551342 | Msa0053130:intron | 45.0% | |
| GTGGTGGTAAAGCTTCAGAA+GGG | - | chr1_2:7551324-7551343 | Msa0053130:intron | 45.0% | |
| TCCTTGAAGGATTGTGCTGT+TGG | - | chr1_2:7551667-7551686 | Msa0053130:intron | 45.0% | |
| TCCAACAGCACAATCCTTCA+AGG | + | chr1_2:7551671-7551690 | None:intergenic | 45.0% | |
| ! | CTTTGCATTGCTCCCAGTTT+TGG | - | chr1_2:7551696-7551715 | Msa0053130:intron | 45.0% |
| CACTCCTTGAAAAACACCTG+AGG | + | chr1_2:7551728-7551747 | None:intergenic | 45.0% | |
| CTCGCTGTCCCAAAGAAAAA+TGG | - | chr1_2:7551846-7551865 | Msa0053130:intron | 45.0% | |
| GACTAAATTCCCTCGAGTGT+TGG | + | chr1_2:7552066-7552085 | None:intergenic | 45.0% | |
| GAGGGAATTTAGTCCCACAT+CGG | - | chr1_2:7552072-7552091 | Msa0053130:intron | 45.0% | |
| TAGTCCCACATCGGATAGAT+AGG | - | chr1_2:7552081-7552100 | Msa0053130:intron | 45.0% | |
| !! | CAAAACTGGCTTGTATGGTG+AGG | + | chr1_2:7552140-7552159 | None:intergenic | 45.0% |
| TGCAATCAATGTCACCAACC+TGG | + | chr1_2:7553950-7553969 | None:intergenic | 45.0% | |
| TCAGTTTAAGCAACCACGGA+AGG | + | chr1_2:7554008-7554027 | None:intergenic | 45.0% | |
| AATCTGCTTGCTTGTAGCCT+GGG | - | chr1_2:7554260-7554279 | Msa0053130:intron | 45.0% | |
| ! | GCTGAGACCCTCTGAAAATA+AGG | + | chr1_2:7554399-7554418 | None:intergenic | 45.0% |
| GTGCTTGACAAGTAACAGCA+AGG | + | chr1_2:7554580-7554599 | None:intergenic | 45.0% | |
| AATCATCACTCCAGCAGCAA+AGG | + | chr1_2:7554682-7554701 | None:intergenic | 45.0% | |
| GATGATTGCAACCACTGATC+TGG | - | chr1_2:7554695-7554714 | Msa0053130:intron | 45.0% | |
| ATCCATCCATGTACTTCCAC+TGG | - | chr1_2:7555028-7555047 | Msa0053130:intron | 45.0% | |
| ! | AAGGCACCAGCTTGTAAAGA+AGG | + | chr1_2:7555142-7555161 | None:intergenic | 45.0% |
| GAGGCAGCATGATCTTCTTT+AGG | + | chr1_2:7555701-7555720 | None:intergenic | 45.0% | |
| TGCAACAAGAACTTCTGGTG+AGG | + | chr1_2:7555720-7555739 | None:intergenic | 45.0% | |
| TCTTACCAGACTAAGAGCTG+TGG | + | chr1_2:7556321-7556340 | None:intergenic | 45.0% | |
| TATAGACCAGAGGTCAGCAA+AGG | + | chr1_2:7556379-7556398 | None:intergenic | 45.0% | |
| ! | CACTGTCGTATGGGAGTATA+TGG | + | chr1_2:7556474-7556493 | None:intergenic | 45.0% |
| ATTCCTGCTGTAGTGCATCT+TGG | - | chr1_2:7556634-7556653 | Msa0053130:intron | 45.0% | |
| ! | TGCATCTTGGTGTGCTATTG+AGG | - | chr1_2:7556647-7556666 | Msa0053130:intron | 45.0% |
| ! | ATCTTGGTGTGCTATTGAGG+TGG | - | chr1_2:7556650-7556669 | Msa0053130:intron | 45.0% |
| ATTACCTCTACTGCACTGTC+AGG | + | chr1_2:7556682-7556701 | None:intergenic | 45.0% | |
| !! | GCGCGTCATTATTTTTCGAC+AGG | - | chr1_2:7556903-7556922 | Msa0053130:intron | 45.0% |
| GCAAGTAACCATCATGGAAC+AGG | + | chr1_2:7556958-7556977 | None:intergenic | 45.0% | |
| TTCTTGACTTCACTGGGGTT+CGG | + | chr1_2:7557018-7557037 | None:intergenic | 45.0% | |
| CAAGACCAACATTGATGCAG+TGG | - | chr1_2:7557075-7557094 | Msa0053130:CDS | 45.0% | |
| !!! | CTTTTTTTTGGTGGTGGCTG+AGG | - | chr1_2:7557182-7557201 | Msa0053130:CDS | 45.0% |
| AATAGATGGGCACGTCAGTA+GGG | + | chr1_2:7557236-7557255 | None:intergenic | 45.0% | |
| AAATAGATGGGCACGTCAGT+AGG | + | chr1_2:7557237-7557256 | None:intergenic | 45.0% | |
| !! | CAAAATATAAAATTTATTAA+CGG | + | chr1_2:7553541-7553560 | None:intergenic | 5.0% |
| !! | CAAAATATAAAATTTATTAA+CGG | + | chr1_2:7553541-7553560 | None:intergenic | 5.0% |
| GTTGAAATGGTGAGGGGTCA+AGG | + | chr1_2:7547499-7547518 | None:intergenic | 50.0% | |
| ATGTGATCGGATAGCGAGTG+AGG | + | chr1_2:7547672-7547691 | None:intergenic | 50.0% | |
| GATCGGAGTGAGCATGTGAT+CGG | + | chr1_2:7547685-7547704 | None:intergenic | 50.0% | |
| !! | CAGTGGTGGAGTTGATGAGT+TGG | + | chr1_2:7547712-7547731 | None:intergenic | 50.0% |
| GGAGATATTGGAGTCAGTGG+TGG | + | chr1_2:7547726-7547745 | None:intergenic | 50.0% | |
| GAGGGAGATATTGGAGTCAG+TGG | + | chr1_2:7547729-7547748 | None:intergenic | 50.0% | |
| ! | AGTGGTGGAGAGGGAGATAT+TGG | + | chr1_2:7547738-7547757 | None:intergenic | 50.0% |
| ATTACAGTGCCTGAATCGGG+AGG | - | chr1_2:7547978-7547997 | Msa0053130:intron | 50.0% | |
| TAGAGAGAGACAGAGAGCTG+GGG | - | chr1_2:7548404-7548423 | Msa0053130:intron | 50.0% | |
| TGGTGGAAACTAAGGTCAGG+TGG | - | chr1_2:7548450-7548469 | Msa0053130:intron | 50.0% | |
| CTACAACCAAGTCGGCTACA+TGG | + | chr1_2:7548610-7548629 | None:intergenic | 50.0% | |
| CGAACTAAATCCAGCAACCG+TGG | - | chr1_2:7548784-7548803 | Msa0053130:intron | 50.0% | |
| TTCGACATATCCACGGTTGC+TGG | + | chr1_2:7548797-7548816 | None:intergenic | 50.0% | |
| GGATGCATATTCACCGAACC+AGG | + | chr1_2:7548855-7548874 | None:intergenic | 50.0% | |
| CTCCAGTACAGCCTGATTCA+AGG | + | chr1_2:7548944-7548963 | None:intergenic | 50.0% | |
| ! | TTGGGGTGTCTTCACCTCTA+TGG | + | chr1_2:7549124-7549143 | None:intergenic | 50.0% |
| CGTAAATCTAGCTGCAGCAC+CGG | + | chr1_2:7549292-7549311 | None:intergenic | 50.0% | |
| !! | CGGTGCTGCAGCTAGATTTA+CGG | - | chr1_2:7549290-7549309 | Msa0053130:CDS | 50.0% |
| AAAGCCTCCGGGTCCAATAA+TGG | + | chr1_2:7549628-7549647 | None:intergenic | 50.0% | |
| ! | CGATCTGTTGCTGTTCTTGG+TGG | - | chr1_2:7550069-7550088 | Msa0053130:CDS | 50.0% |
| CATGGCATGAATGTCTGCAG+AGG | + | chr1_2:7550432-7550451 | None:intergenic | 50.0% | |
| GTGCTGTGATGTACTTGCAG+TGG | - | chr1_2:7550680-7550699 | Msa0053130:intron | 50.0% | |
| ! | GGCACCTCAGGTGTTTTTCA+AGG | - | chr1_2:7551721-7551740 | Msa0053130:intron | 50.0% |
| GCAGCAGCAATCAAGGAAAG+TGG | + | chr1_2:7552432-7552451 | None:intergenic | 50.0% | |
| ! | ACTTGCTGCAGCAGCAATCA+AGG | + | chr1_2:7552439-7552458 | None:intergenic | 50.0% |
| GCTGCAGCAATCAAGGAAAG+TGG | + | chr1_2:7552556-7552575 | None:intergenic | 50.0% | |
| ! | ACTTGCTGCTGCAGCAATCA+AGG | + | chr1_2:7552563-7552582 | None:intergenic | 50.0% |
| GCAGCAGCAATCAAGGAAAG+TGG | + | chr1_2:7552432-7552451 | None:intergenic | 50.0% | |
| TCTTGCTGCAGCAGCAATCA+AGG | + | chr1_2:7552911-7552930 | None:intergenic | 50.0% | |
| TCTTGCTGCAGCAGCAATCA+AGG | + | chr1_2:7552911-7552930 | None:intergenic | 50.0% | |
| ATACAACAATGGCAGGGGTG+TGG | - | chr1_2:7554115-7554134 | Msa0053130:intron | 50.0% | |
| CAATCTGCTTGCTTGTAGCC+TGG | - | chr1_2:7554259-7554278 | Msa0053130:intron | 50.0% | |
| GAACTAGGTTCCTTTGCTGC+TGG | - | chr1_2:7554669-7554688 | Msa0053130:CDS | 50.0% | |
| TGTATGTGGAGCCAGATCAG+TGG | + | chr1_2:7554709-7554728 | None:intergenic | 50.0% | |
| ! | GACCAGTGGAAGTACATGGA+TGG | + | chr1_2:7555033-7555052 | None:intergenic | 50.0% |
| GGAATGTCCATGGCACAGAT+AGG | - | chr1_2:7555566-7555585 | Msa0053130:intron | 50.0% | |
| TAGGTTCCTTTGCTGACCTC+TGG | - | chr1_2:7556370-7556389 | Msa0053130:intron | 50.0% | |
| ATACTCCCATACGACAGTGC+AGG | - | chr1_2:7556475-7556494 | Msa0053130:intron | 50.0% | |
| GTGCATATGCATCGCCTGTT+TGG | - | chr1_2:7556500-7556519 | Msa0053130:intron | 50.0% | |
| ACACCAAGATGCACTACAGC+AGG | + | chr1_2:7556640-7556659 | None:intergenic | 50.0% | |
| TTCTCCTGACAGTGCAGTAG+AGG | - | chr1_2:7556675-7556694 | Msa0053130:intron | 50.0% | |
| GATAACCTCCGCTCAGATAG+TGG | - | chr1_2:7556801-7556820 | Msa0053130:intron | 50.0% | |
| CATGGAACAGGATCGGATGA+TGG | + | chr1_2:7556946-7556965 | None:intergenic | 50.0% | |
| CATCCGATCCTGTTCCATGA+TGG | - | chr1_2:7556947-7556966 | Msa0053130:CDS | 50.0% | |
| ACCCCAGTGAAGTCAAGAAC+AGG | - | chr1_2:7557019-7557038 | Msa0053130:CDS | 50.0% | |
| CCCTGTTCTTGACTTCACTG+GGG | + | chr1_2:7557023-7557042 | None:intergenic | 50.0% | |
| CCCCAGTGAAGTCAAGAACA+GGG | - | chr1_2:7557020-7557039 | Msa0053130:CDS | 50.0% | |
| CCCCTGTTCTTGACTTCACT+GGG | + | chr1_2:7557024-7557043 | None:intergenic | 50.0% | |
| CCCAGTGAAGTCAAGAACAG+GGG | - | chr1_2:7557021-7557040 | Msa0053130:CDS | 50.0% | |
| TCCCCTGTTCTTGACTTCAC+TGG | + | chr1_2:7557025-7557044 | None:intergenic | 50.0% | |
| AGTGAAGTCAAGAACAGGGG+AGG | - | chr1_2:7557024-7557043 | Msa0053130:CDS | 50.0% | |
| GTGAAGTCAAGAACAGGGGA+GGG | - | chr1_2:7557025-7557044 | Msa0053130:CDS | 50.0% | |
| TGAAGTCAAGAACAGGGGAG+GGG | - | chr1_2:7557026-7557045 | Msa0053130:CDS | 50.0% | |
| CAGTTACAGTTCACCGGCGA+GGG | + | chr1_2:7547536-7547555 | None:intergenic | 55.0% | |
| TGCCAACTGCTAACCTTCGC+CGG | - | chr1_2:7547554-7547573 | Msa0053130:three_prime_UTR | 55.0% | |
| ! | TGGTGTTAACATTGCCGCGC+CGG | + | chr1_2:7547576-7547595 | None:intergenic | 55.0% |
| CTGTCACCACCAACACCAAG+TGG | + | chr1_2:7547622-7547641 | None:intergenic | 55.0% | |
| CGGATAGCGAGTGAGGAATG+AGG | + | chr1_2:7547665-7547684 | None:intergenic | 55.0% | |
| ! | TTGACGAGGAGTGGTGGAGA+GGG | + | chr1_2:7547747-7547766 | None:intergenic | 55.0% |
| GAAGGAACCTTGACGAGGAG+TGG | + | chr1_2:7547756-7547775 | None:intergenic | 55.0% | |
| AGAGAGAGACAGAGAGCTGG+GGG | - | chr1_2:7548405-7548424 | Msa0053130:intron | 55.0% | |
| GACTACAGGGAACCCTGGTT+CGG | - | chr1_2:7548839-7548858 | Msa0053130:intron | 55.0% | |
| ! | TAGCTGCAGCACCGGATACT+TGG | + | chr1_2:7549284-7549303 | None:intergenic | 55.0% |
| !! | GGTGTCGCGTTTGCTTTTGC+TGG | - | chr1_2:7549448-7549467 | Msa0053130:CDS | 55.0% |
| ! | GCTGGCTCCATTATTGGACC+CGG | - | chr1_2:7549618-7549637 | Msa0053130:intron | 55.0% |
| !!! | GCATTGCTCCCAGTTTTGGG+TGG | - | chr1_2:7551700-7551719 | Msa0053130:intron | 55.0% |
| ! | CTGAGGTGCCACCCAAAACT+GGG | + | chr1_2:7551711-7551730 | None:intergenic | 55.0% |
| ATGTTAGCGGCCAACACTCG+AGG | - | chr1_2:7552053-7552072 | Msa0053130:intron | 55.0% | |
| TGTTAGCGGCCAACACTCGA+GGG | - | chr1_2:7552054-7552073 | Msa0053130:intron | 55.0% | |
| TGGGACCACAGCTCTTAGTC+TGG | - | chr1_2:7556313-7556332 | Msa0053130:intron | 55.0% | |
| CACTGCCTGCACTGTCGTAT+GGG | + | chr1_2:7556483-7556502 | None:intergenic | 55.0% | |
| GCTGCTTGCCACTATCTGAG+CGG | + | chr1_2:7556812-7556831 | None:intergenic | 55.0% | |
| !! | GGGGTTCGGATTGGTTGTCT+TGG | + | chr1_2:7557004-7557023 | None:intergenic | 55.0% |
| GACTTCACTGGGGTTCGGAT+TGG | + | chr1_2:7557013-7557032 | None:intergenic | 55.0% | |
| TGCTCACTACTCTCCCTCGC+CGG | - | chr1_2:7547520-7547539 | Msa0053130:three_prime_UTR | 60.0% | |
| GCAGTTACAGTTCACCGGCG+AGG | + | chr1_2:7547537-7547556 | None:intergenic | 60.0% | |
| ! | CTTGACGAGGAGTGGTGGAG+AGG | + | chr1_2:7547748-7547767 | None:intergenic | 60.0% |
| CTCTCCACCACTCCTCGTCA+AGG | - | chr1_2:7547746-7547765 | Msa0053130:three_prime_UTR | 60.0% | |
| GGAACCTTGACGAGGAGTGG+TGG | + | chr1_2:7547753-7547772 | None:intergenic | 60.0% | |
| TCGGCGAAGGAACCTTGACG+AGG | + | chr1_2:7547761-7547780 | None:intergenic | 60.0% | |
| GAGAGAGACAGAGAGCTGGG+GGG | - | chr1_2:7548406-7548425 | Msa0053130:intron | 60.0% | |
| GGCTCCATTATTGGACCCGG+AGG | - | chr1_2:7549621-7549640 | Msa0053130:intron | 60.0% | |
| TCTGGTAGGGATGGCGTGAG+TGG | + | chr1_2:7550941-7550960 | None:intergenic | 60.0% | |
| ! | CCTGAGGTGCCACCCAAAAC+TGG | + | chr1_2:7551712-7551731 | None:intergenic | 60.0% |
| !!! | CCAGTTTTGGGTGGCACCTC+AGG | - | chr1_2:7551709-7551728 | Msa0053130:intron | 60.0% |
| TGTCTCGCACTTGCCTTCCG+TGG | - | chr1_2:7553992-7554011 | Msa0053130:intron | 60.0% | |
| GCACTGCCTGCACTGTCGTA+TGG | + | chr1_2:7556484-7556503 | None:intergenic | 60.0% | |
| GCTTGCCACTATCTGAGCGG+AGG | + | chr1_2:7556809-7556828 | None:intergenic | 60.0% | |
| CGCCGGCGAAGGTTAGCAGT+TGG | + | chr1_2:7547559-7547578 | None:intergenic | 65.0% | |
| ACTGCTAACCTTCGCCGGCG+CGG | - | chr1_2:7547559-7547578 | Msa0053130:three_prime_UTR | 65.0% | |
| ! | TAACATTGCCGCGCCGGCGA+AGG | + | chr1_2:7547570-7547589 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 7547452 | 7557302 | 7547452 | ID=Msa0053130;Name=Msa0053130 |
| chr1_2 | mRNA | 7547452 | 7557302 | 7547452 | ID=Msa0053130-mRNA-1;Parent=Msa0053130;Name=Msa0053130-mRNA-1;_AED=0.12;_eAED=0.12;_QI=6|1|1|1|0.89|0.95|20|433|625 |
| chr1_2 | exon | 7547452 | 7547968 | 7547452 | ID=Msa0053130-mRNA-1:exon:2607;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7548058 | 7548147 | 7548058 | ID=Msa0053130-mRNA-1:exon:2606;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7548420 | 7548464 | 7548420 | ID=Msa0053130-mRNA-1:exon:2605;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7549114 | 7549191 | 7549114 | ID=Msa0053130-mRNA-1:exon:2604;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7549285 | 7549473 | 7549285 | ID=Msa0053130-mRNA-1:exon:2603;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7550017 | 7550112 | 7550017 | ID=Msa0053130-mRNA-1:exon:2602;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7550473 | 7550526 | 7550473 | ID=Msa0053130-mRNA-1:exon:2601;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7550707 | 7550803 | 7550707 | ID=Msa0053130-mRNA-1:exon:2600;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7552990 | 7553078 | 7552990 | ID=Msa0053130-mRNA-1:exon:2599;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7553177 | 7553254 | 7553177 | ID=Msa0053130-mRNA-1:exon:2598;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7553366 | 7553434 | 7553366 | ID=Msa0053130-mRNA-1:exon:2597;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7554614 | 7554697 | 7554614 | ID=Msa0053130-mRNA-1:exon:2596;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7554804 | 7554875 | 7554804 | ID=Msa0053130-mRNA-1:exon:2595;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7555083 | 7555157 | 7555083 | ID=Msa0053130-mRNA-1:exon:2594;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7555277 | 7555352 | 7555277 | ID=Msa0053130-mRNA-1:exon:2593;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7555443 | 7555504 | 7555443 | ID=Msa0053130-mRNA-1:exon:2592;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7555594 | 7555645 | 7555594 | ID=Msa0053130-mRNA-1:exon:2591;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7555744 | 7555802 | 7555744 | ID=Msa0053130-mRNA-1:exon:2590;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7556726 | 7556769 | 7556726 | ID=Msa0053130-mRNA-1:exon:2589;Parent=Msa0053130-mRNA-1 |
| chr1_2 | exon | 7556912 | 7557302 | 7556912 | ID=Msa0053130-mRNA-1:exon:2588;Parent=Msa0053130-mRNA-1 |
| chr1_2 | five_prime_UTR | 7557297 | 7557302 | 7557297 | ID=Msa0053130-mRNA-1:five_prime_utr;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7556912 | 7557296 | 7556912 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7556726 | 7556769 | 7556726 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7555744 | 7555802 | 7555744 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7555594 | 7555645 | 7555594 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7555443 | 7555504 | 7555443 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7555277 | 7555352 | 7555277 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7555083 | 7555157 | 7555083 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7554804 | 7554875 | 7554804 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7554614 | 7554697 | 7554614 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7553366 | 7553434 | 7553366 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7553177 | 7553254 | 7553177 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7552990 | 7553078 | 7552990 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7550707 | 7550803 | 7550707 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7550473 | 7550526 | 7550473 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7550017 | 7550112 | 7550017 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7549285 | 7549473 | 7549285 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7549114 | 7549191 | 7549114 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7548420 | 7548464 | 7548420 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7548058 | 7548147 | 7548058 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | CDS | 7547885 | 7547968 | 7547885 | ID=Msa0053130-mRNA-1:cds;Parent=Msa0053130-mRNA-1 |
| chr1_2 | three_prime_UTR | 7547452 | 7547884 | 7547452 | ID=Msa0053130-mRNA-1:three_prime_utr;Parent=Msa0053130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
