Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053610 | sp|O04278|GPA1_PEA | 97.396 | 384 | 10 | 0 | 9 | 392 | 1 | 384 | 0.0 | 776 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053610 | G7I9V0 | 98.214 | 392 | 7 | 0 | 1 | 392 | 1 | 392 | 0.0 | 796 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053610 | Msa0098470 | 0.806067 | 9.847833e-50 | -8.615850e-47 |
| Msa0053610 | Msa0099230 | 0.827623 | 1.412300e-54 | -8.615850e-47 |
| Msa0053610 | Msa0148010 | 0.805587 | 1.241999e-49 | -8.615850e-47 |
| Msa0053610 | Msa1385110 | 0.804569 | 2.028668e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053610 | MtrunA17_Chr1g0151141 | 96.429 | 392 | 6 | 1 | 9 | 392 | 1 | 392 | 0.0 | 773 |
| Msa0053610 | MtrunA17_Chr3g0136391 | 68.586 | 191 | 47 | 4 | 123 | 306 | 10 | 194 | 1.11e-86 | 263 |
| Msa0053610 | MtrunA17_Chr5g0410081 | 33.249 | 394 | 203 | 14 | 44 | 382 | 422 | 810 | 1.92e-52 | 187 |
| Msa0053610 | MtrunA17_Chr6g0479291 | 30.026 | 383 | 216 | 11 | 47 | 382 | 524 | 901 | 5.33e-48 | 175 |
| Msa0053610 | MtrunA17_Chr8g0374061 | 30.273 | 403 | 212 | 14 | 47 | 382 | 375 | 775 | 1.08e-43 | 162 |
| Msa0053610 | MtrunA17_Chr5g0402991 | 33.019 | 318 | 171 | 10 | 47 | 322 | 497 | 814 | 1.90e-42 | 159 |
| Msa0053610 | MtrunA17_Chr1g0162561 | 28.198 | 383 | 209 | 11 | 45 | 361 | 459 | 841 | 2.79e-39 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053610 | AT2G26300.2 | 86.458 | 384 | 51 | 1 | 9 | 392 | 1 | 383 | 0.0 | 692 |
| Msa0053610 | AT2G26300.1 | 86.458 | 384 | 51 | 1 | 9 | 392 | 1 | 383 | 0.0 | 692 |
| Msa0053610 | AT1G31930.5 | 32.995 | 394 | 203 | 12 | 45 | 382 | 428 | 816 | 1.38e-54 | 193 |
| Msa0053610 | AT1G31930.2 | 32.995 | 394 | 203 | 12 | 45 | 382 | 428 | 816 | 1.38e-54 | 193 |
| Msa0053610 | AT1G31930.3 | 32.995 | 394 | 203 | 12 | 45 | 382 | 428 | 816 | 1.38e-54 | 193 |
| Msa0053610 | AT1G31930.6 | 32.995 | 394 | 203 | 12 | 45 | 382 | 428 | 816 | 1.38e-54 | 193 |
| Msa0053610 | AT1G31930.1 | 32.995 | 394 | 203 | 12 | 45 | 382 | 428 | 816 | 1.38e-54 | 193 |
| Msa0053610 | AT1G31930.4 | 32.995 | 394 | 203 | 12 | 45 | 382 | 428 | 816 | 1.38e-54 | 193 |
| Msa0053610 | AT2G23460.1 | 29.742 | 427 | 238 | 14 | 11 | 382 | 444 | 863 | 8.41e-43 | 160 |
| Msa0053610 | AT4G34390.1 | 28.319 | 339 | 204 | 9 | 44 | 344 | 459 | 796 | 1.05e-33 | 133 |
| Msa0053610 | AT4G34390.2 | 28.173 | 323 | 186 | 9 | 44 | 344 | 459 | 757 | 7.24e-31 | 125 |
Find 94 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCCACATTCATCTTTAA+AGG | 0.198789 | 1_2:+8091144 | Msa0053610:three_prime_UTR |
| GAAGAGGTGAGATCAGATTT+TGG | 0.248220 | 1_2:+8091014 | Msa0053610:three_prime_UTR |
| GGCGAAAAGTTATCAGAAAT+TGG | 0.258807 | 1_2:+8087343 | Msa0053610:CDS |
| TTTCTATCTATGTGTCTTGT+TGG | 0.278728 | 1_2:-8084329 | None:intergenic |
| CGCTATCCGGAGCAGTGTTC+TGG | 0.283333 | 1_2:-8090819 | None:intergenic |
| TGTTATATCCAGTGAAAATA+AGG | 0.321185 | 1_2:+8087143 | Msa0053610:CDS |
| GTGGAAGGATGCTGCAATTC+AGG | 0.324847 | 1_2:+8087423 | Msa0053610:CDS |
| ATGTCTTCTTCACAACCTTC+TGG | 0.325401 | 1_2:-8090882 | None:intergenic |
| TTCTTGTTCGTGTTTGGTTT+TGG | 0.331914 | 1_2:-8084425 | None:intergenic |
| AGATTGTACCCATTATTTCA+TGG | 0.342997 | 1_2:+8087596 | Msa0053610:CDS |
| ATGTTCAATCTCTTGTTTCC+CGG | 0.350590 | 1_2:-8089978 | None:intergenic |
| TCTTACCTGCTTAAATATAG+TGG | 0.358453 | 1_2:-8086738 | None:intergenic |
| GGCTTGTTCTTGTTCGTGTT+TGG | 0.361761 | 1_2:-8084431 | None:intergenic |
| TATCCCTCTTATATAACATA+TGG | 0.369849 | 1_2:-8090976 | None:intergenic |
| ATTTCCTCCTCTCATTTCTC+TGG | 0.370893 | 1_2:-8089173 | None:intergenic |
| CCTCAAAACATTGTTGCTTC+AGG | 0.378528 | 1_2:-8089628 | None:intergenic |
| ATTTCTTGTAAAATCTTTGT+TGG | 0.379713 | 1_2:+8091086 | Msa0053610:three_prime_UTR |
| ACAAATAATAAATTACGATT+AGG | 0.387438 | 1_2:-8084634 | None:intergenic |
| AGAGCGCCGAAAGGTGATTC+TGG | 0.395079 | 1_2:-8084457 | None:intergenic |
| TCTCCACATTCATCTTTAAA+GGG | 0.398409 | 1_2:+8091145 | Msa0053610:three_prime_UTR |
| AGAGAAATGAGAGGAGGAAA+TGG | 0.403104 | 1_2:+8089175 | Msa0053610:CDS |
| GACTACCAGCCACTTTCAAC+CGG | 0.403399 | 1_2:+8089959 | Msa0053610:CDS |
| ATGAAATAATGGGTACAATC+TGG | 0.415906 | 1_2:-8087594 | None:intergenic |
| CATATTTGAGAAGAAGATCC+TGG | 0.428496 | 1_2:+8089824 | Msa0053610:CDS |
| CAATTATGTGCGTGAGTTCG+AGG | 0.428648 | 1_2:+8084253 | Msa0053610:five_prime_UTR |
| GCCTTACCAGAATCACCTTT+CGG | 0.445712 | 1_2:+8084451 | Msa0053610:five_prime_UTR |
| TAAATCTTGGATACCTTTGT+TGG | 0.446321 | 1_2:-8087654 | None:intergenic |
| GAGACGGAGGAATCTCTTTG+AGG | 0.457860 | 1_2:+8090927 | Msa0053610:CDS |
| CGGAGGAATCTCTTTGAGGC+TGG | 0.474033 | 1_2:+8090931 | Msa0053610:CDS |
| AATGGGTACAATCTGGAACT+TGG | 0.478299 | 1_2:-8087587 | None:intergenic |
| ATAACATATGGTCCACTCAT+TGG | 0.479611 | 1_2:-8090964 | None:intergenic |
| AACACGCGGTCTACGCTATC+CGG | 0.486792 | 1_2:-8090832 | None:intergenic |
| GTTTCCCGGTTGAAAGTGGC+TGG | 0.493695 | 1_2:-8089964 | None:intergenic |
| AAAAGTAGGTTACCTGAAAA+GGG | 0.497289 | 1_2:-8084807 | None:intergenic |
| TGGACCATATGTTATATAAG+AGG | 0.500754 | 1_2:+8090972 | Msa0053610:three_prime_UTR |
| GTGTTGTAGAGATTCAGTTC+AGG | 0.503046 | 1_2:+8087937 | Msa0053610:CDS |
| ACCGCGTGTTTAAGATATAT+AGG | 0.512353 | 1_2:+8090845 | Msa0053610:CDS |
| ATGGTGGTGGTTGTTGATAC+TGG | 0.514497 | 1_2:-8084539 | None:intergenic |
| AAATGGATCCATCTGTTTGA+AGG | 0.514605 | 1_2:+8089192 | Msa0053610:CDS |
| TGAAAACAAGAACAGAATGA+TGG | 0.514701 | 1_2:+8089580 | Msa0053610:CDS |
| GAAGTGTGTACATGAATTAG+TGG | 0.519583 | 1_2:-8085389 | None:intergenic |
| TCTTGTTTCCCGGTTGAAAG+TGG | 0.524400 | 1_2:-8089968 | None:intergenic |
| AAGAATAGAGTTAGAAACAA+AGG | 0.526659 | 1_2:+8085630 | Msa0053610:CDS |
| TAGACATTGGCATGAATGAC+TGG | 0.527717 | 1_2:-8086890 | None:intergenic |
| GAAGTCCACTATATTTAAGC+AGG | 0.528141 | 1_2:+8086733 | Msa0053610:CDS |
| AAAATCTTTGTTGGAGTGAG+TGG | 0.531296 | 1_2:+8091095 | Msa0053610:three_prime_UTR |
| CTTGCAAGAGTTCGTACCAC+TGG | 0.536698 | 1_2:+8087915 | Msa0053610:CDS |
| CTGAAACTCCTTCAAACAGA+TGG | 0.537712 | 1_2:-8089200 | None:intergenic |
| AACCACTCACATACATTAAG+CGG | 0.544573 | 1_2:-8089932 | None:intergenic |
| ATTCATGTACACACTTCGGC+TGG | 0.545716 | 1_2:+8085395 | Msa0053610:five_prime_UTR |
| ATTCAGAAACTTCTACTACT+AGG | 0.546573 | 1_2:+8085664 | Msa0053610:CDS |
| TCTTTGTTGGAGTGAGTGGA+TGG | 0.546756 | 1_2:+8091099 | Msa0053610:three_prime_UTR |
| TGATTACCCTCGTCTCACTA+AGG | 0.559747 | 1_2:+8087375 | Msa0053610:CDS |
| ATATTTCCAGAACACTGCTC+CGG | 0.563292 | 1_2:+8090813 | Msa0053610:CDS |
| TTCCCCTTTAAAGATGAATG+TGG | 0.563531 | 1_2:-8091148 | None:intergenic |
| GACCACTGCACTTGACCAGA+AGG | 0.565096 | 1_2:+8090867 | Msa0053610:CDS |
| GGACCATATGTTATATAAGA+GGG | 0.566403 | 1_2:+8090973 | Msa0053610:three_prime_UTR |
| CACAAGAAATAGAGAGTCTG+TGG | 0.566462 | 1_2:+8087404 | Msa0053610:CDS |
| CTCCACATTCATCTTTAAAG+GGG | 0.572440 | 1_2:+8091146 | Msa0053610:three_prime_UTR |
| TTCTAATTATGTTCCAACAA+AGG | 0.573279 | 1_2:+8087641 | Msa0053610:CDS |
| TGGAGTGAGTGGATGGAGAA+AGG | 0.573704 | 1_2:+8091106 | Msa0053610:three_prime_UTR |
| AACCTTCTGGTCAAGTGCAG+TGG | 0.574510 | 1_2:-8090869 | None:intergenic |
| GTTGGAGAAAACAAGAAAAG+TGG | 0.574561 | 1_2:+8089120 | Msa0053610:CDS |
| GCCGAAAGGTGATTCTGGTA+AGG | 0.578266 | 1_2:-8084452 | None:intergenic |
| GCTTACTTTGTAGCAAAAGT+CGG | 0.584924 | 1_2:+8085466 | Msa0053610:CDS |
| ACCACTCACATACATTAAGC+GGG | 0.592242 | 1_2:-8089931 | None:intergenic |
| CATTGGCATGAATGACTGGT+AGG | 0.598977 | 1_2:-8086886 | None:intergenic |
| AGAAATAGAGAGTCTGTGGA+AGG | 0.613073 | 1_2:+8087408 | Msa0053610:CDS |
| ATTTCAAACTGGCTTTGATG+AGG | 0.616068 | 1_2:+8086847 | Msa0053610:CDS |
| GTCTATAGACTGTTTGATGT+CGG | 0.618439 | 1_2:+8089147 | Msa0053610:CDS |
| AACTTGGAGCTCATTACCAC+GGG | 0.623746 | 1_2:-8087571 | None:intergenic |
| AAGTGCAAAGAAAGTACAAG+TGG | 0.624278 | 1_2:+8084290 | Msa0053610:five_prime_UTR |
| TTGATGAGACTTTGAGACGG+AGG | 0.624845 | 1_2:+8090914 | Msa0053610:CDS |
| TGCAAAGAAAGTACAAGTGG+TGG | 0.625959 | 1_2:+8084293 | Msa0053610:five_prime_UTR |
| GCAAGTTCCTTAGTGAGACG+AGG | 0.629346 | 1_2:-8087382 | None:intergenic |
| TTGTTGATGAGACTTTGAGA+CGG | 0.630412 | 1_2:+8090911 | Msa0053610:CDS |
| ACTACCAGCCACTTTCAACC+GGG | 0.630833 | 1_2:+8089960 | Msa0053610:CDS |
| ACTAATTCATGTACACACTT+CGG | 0.631328 | 1_2:+8085391 | Msa0053610:five_prime_UTR |
| CAACACTGAAGAAAATGCAC+AGG | 0.631363 | 1_2:+8085503 | Msa0053610:CDS |
| TATAGACTGTTTGATGTCGG+TGG | 0.634857 | 1_2:+8089150 | Msa0053610:CDS |
| AAGTGTGTACATGAATTAGT+GGG | 0.635225 | 1_2:-8085388 | None:intergenic |
| TTTCTACAGTTACTTCACGA+CGG | 0.645455 | 1_2:+8087078 | Msa0053610:intron |
| ATTTCATGGAAAATTTGCAG+AGG | 0.651354 | 1_2:+8087610 | Msa0053610:CDS |
| TCCCGCTTAATGTATGTGAG+TGG | 0.652970 | 1_2:+8089930 | Msa0053610:CDS |
| CAAGTTCCTTAGTGAGACGA+GGG | 0.660424 | 1_2:-8087381 | None:intergenic |
| GAACTTGGAGCTCATTACCA+CGG | 0.660679 | 1_2:-8087572 | None:intergenic |
| GAAAAGTTATCAGAAATTGG+AGG | 0.672048 | 1_2:+8087346 | Msa0053610:CDS |
| CTGTAGGAAACATATGCCCG+TGG | 0.675146 | 1_2:+8087555 | Msa0053610:intron |
| CTGAATCTCTACAACACCAG+TGG | 0.677147 | 1_2:-8087931 | None:intergenic |
| GTGGCCAGAGAAATGAGAGG+AGG | 0.687189 | 1_2:+8089169 | Msa0053610:CDS |
| TCCTATATATCTTAAACACG+CGG | 0.695502 | 1_2:-8090846 | None:intergenic |
| ACAGGAACATACATACACAC+AGG | 0.697034 | 1_2:-8084385 | None:intergenic |
| GGCTTGTTATGACCAATGAG+TGG | 0.702624 | 1_2:+8090952 | Msa0053610:exon |
| TCGGTGGCCAGAGAAATGAG+AGG | 0.733004 | 1_2:+8089166 | Msa0053610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAGTTTGTTAATTTTA+AGG | - | chr1_2:8084671-8084690 | None:intergenic | 10.0% |
| !!! | GCTTAATTTTTTTTTTTTTT+GGG | + | chr1_2:8084895-8084914 | Msa0053610:intron | 10.0% |
| !!! | CTTAATTTTTTTTTTTTTTG+GGG | + | chr1_2:8084896-8084915 | Msa0053610:intron | 10.0% |
| !!! | TTAATTTTTTTTTTTTTTGG+GGG | + | chr1_2:8084897-8084916 | Msa0053610:intron | 10.0% |
| !!! | TTTTATATCAAAAATACATA+TGG | - | chr1_2:8086308-8086327 | None:intergenic | 10.0% |
| !! | ACAAAAAAAAAAAACATGTA+TGG | - | chr1_2:8084561-8084580 | None:intergenic | 15.0% |
| !! | ACAAATAATAAATTACGATT+AGG | - | chr1_2:8084637-8084656 | None:intergenic | 15.0% |
| !!! | TTTATTGAGAAATTTTATCT+GGG | + | chr1_2:8084869-8084888 | Msa0053610:intron | 15.0% |
| !!! | GGCTTAATTTTTTTTTTTTT+TGG | + | chr1_2:8084894-8084913 | Msa0053610:intron | 15.0% |
| !!! | TCTCTTTTTTTTTTTTAACT+CGG | - | chr1_2:8085280-8085299 | None:intergenic | 15.0% |
| !!! | CAAAATTTTATTTGGAAAAA+TGG | - | chr1_2:8086435-8086454 | None:intergenic | 15.0% |
| !!! | ATAAAACTTTTATTTCAAAC+TGG | + | chr1_2:8086836-8086855 | Msa0053610:CDS | 15.0% |
| !! | ATAGACTATTATAAATCTAA+CGG | - | chr1_2:8088916-8088935 | None:intergenic | 15.0% |
| !! | TATATTTCAAAGTTGTAAAT+AGG | - | chr1_2:8088961-8088980 | None:intergenic | 15.0% |
| !! | TTAATGAAAAATTTCAAATG+CGG | - | chr1_2:8090482-8090501 | None:intergenic | 15.0% |
| !!! | AAAATATTTTTACAATGAAG+AGG | + | chr1_2:8090998-8091017 | Msa0053610:three_prime_UTR | 15.0% |
| !! | TAAAAAAATGAAAAAGAACG+AGG | - | chr1_2:8084519-8084538 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAACATGTATGG+TGG | - | chr1_2:8084558-8084577 | None:intergenic | 20.0% |
| !! | TAAAATTTCTCAATAAAGGA+TGG | - | chr1_2:8084866-8084885 | None:intergenic | 20.0% |
| !! | CAGATAAAATTTCTCAATAA+AGG | - | chr1_2:8084870-8084889 | None:intergenic | 20.0% |
| !!! | CTTTATTGAGAAATTTTATC+TGG | + | chr1_2:8084868-8084887 | Msa0053610:intron | 20.0% |
| !!! | TGGTTTTAGAATAATTTGAA+AGG | + | chr1_2:8085078-8085097 | Msa0053610:intron | 20.0% |
| !!! | GGTTTTAGAATAATTTGAAA+GGG | + | chr1_2:8085079-8085098 | Msa0053610:intron | 20.0% |
| !!! | AGATGTTTTTTTTTGTTTTC+TGG | + | chr1_2:8085322-8085341 | Msa0053610:intron | 20.0% |
| !!! | AATTTTATTTGGAAAAATGG+AGG | - | chr1_2:8086432-8086451 | None:intergenic | 20.0% |
| !!! | TTTTTTAGTATTGTTGATTG+AGG | + | chr1_2:8086465-8086484 | Msa0053610:intron | 20.0% |
| !!! | TATTTGTATACTCATGTTTT+TGG | + | chr1_2:8086492-8086511 | Msa0053610:intron | 20.0% |
| !!! | ATTTGTATACTCATGTTTTT+GGG | + | chr1_2:8086493-8086512 | Msa0053610:intron | 20.0% |
| !!! | GCTTGCTTTTATTATTTTTA+TGG | + | chr1_2:8086656-8086675 | Msa0053610:intron | 20.0% |
| !! | CACTTATTTAAACTTATCAA+TGG | + | chr1_2:8086681-8086700 | Msa0053610:intron | 20.0% |
| !!! | CAAATTTTCCATGAAATAAT+GGG | - | chr1_2:8087607-8087626 | None:intergenic | 20.0% |
| !!! | ATGTATTTAGAATACTATGT+GGG | - | chr1_2:8088217-8088236 | None:intergenic | 20.0% |
| !!! | AATTTCAAGTTTGACAATAA+AGG | + | chr1_2:8088266-8088285 | Msa0053610:intron | 20.0% |
| !! | AATACTAACAATTACAACAT+CGG | - | chr1_2:8088731-8088750 | None:intergenic | 20.0% |
| !! | TGTAATTGTTAGTATTATGA+TGG | + | chr1_2:8088735-8088754 | Msa0053610:intron | 20.0% |
| !! | TAGACTATTATAAATCTAAC+GGG | - | chr1_2:8088915-8088934 | None:intergenic | 20.0% |
| !! | CATATTAAAATAGAGTCAAA+TGG | - | chr1_2:8089264-8089283 | None:intergenic | 20.0% |
| !!! | TAACATCTAAGACAATTATA+TGG | + | chr1_2:8089668-8089687 | Msa0053610:intron | 20.0% |
| !! | TTTGGATAAACAACTTAATT+TGG | + | chr1_2:8090075-8090094 | Msa0053610:intron | 20.0% |
| !!! | TAATATAACATAGTCAGTTT+TGG | + | chr1_2:8090368-8090387 | Msa0053610:intron | 20.0% |
| !! | TCTCAGTTAAAATAAGTTAT+TGG | - | chr1_2:8090569-8090588 | None:intergenic | 20.0% |
| !! | ATTTCTTGTAAAATCTTTGT+TGG | + | chr1_2:8091086-8091105 | Msa0053610:three_prime_UTR | 20.0% |
| ! | AATGAGGGAATGAAAAAAAT+GGG | - | chr1_2:8084494-8084513 | None:intergenic | 25.0% |
| ! | AAATGAGGGAATGAAAAAAA+TGG | - | chr1_2:8084495-8084514 | None:intergenic | 25.0% |
| ! | TAGCAGTTTAGCATAATATT+TGG | + | chr1_2:8084955-8084974 | Msa0053610:intron | 25.0% |
| !!! | TGTTTTTGTGATTTTGCATT+TGG | + | chr1_2:8084999-8085018 | Msa0053610:intron | 25.0% |
| ! | TTAAACAATACACTCCAAAT+CGG | - | chr1_2:8085033-8085052 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTTCCTTTTGTT+TGG | + | chr1_2:8085103-8085122 | Msa0053610:intron | 25.0% |
| !!! | TTTTTTTTTAACTCGGTATC+CGG | - | chr1_2:8085273-8085292 | None:intergenic | 25.0% |
| !! | TGTTTTGTAGCAGAAAAAAT+GGG | + | chr1_2:8085444-8085463 | Msa0053610:CDS | 25.0% |
| !!! | GAAAGTGCTATATTTGATTA+AGG | + | chr1_2:8085574-8085593 | Msa0053610:intron | 25.0% |
| ! | AAGAATAGAGTTAGAAACAA+AGG | + | chr1_2:8085630-8085649 | Msa0053610:CDS | 25.0% |
| !! | TACTACTAGGTACATTTTAT+TGG | + | chr1_2:8085677-8085696 | Msa0053610:intron | 25.0% |
| ! | CTAATTCAATCCTACTAAAT+CGG | - | chr1_2:8085915-8085934 | None:intergenic | 25.0% |
| ! | CTGCAATGTATTATATAAGT+GGG | + | chr1_2:8086071-8086090 | Msa0053610:intron | 25.0% |
| !!! | TAAGGTGTTTTACTATACTA+TGG | + | chr1_2:8086243-8086262 | Msa0053610:intron | 25.0% |
| !! | CTCATCTGCAAAATTTTATT+TGG | - | chr1_2:8086443-8086462 | None:intergenic | 25.0% |
| !! | TTTTATTGTCTGATAGACAT+TGG | - | chr1_2:8086906-8086925 | None:intergenic | 25.0% |
| ! | TGTTATATCCAGTGAAAATA+AGG | + | chr1_2:8087143-8087162 | Msa0053610:CDS | 25.0% |
| ! | ACAAAAAACCTACATACAAT+TGG | - | chr1_2:8087225-8087244 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGTTTGTTTTGTG+TGG | + | chr1_2:8087239-8087258 | Msa0053610:intron | 25.0% |
| !! | GCAAATTTTCCATGAAATAA+TGG | - | chr1_2:8087608-8087627 | None:intergenic | 25.0% |
| ! | TTCTAATTATGTTCCAACAA+AGG | + | chr1_2:8087641-8087660 | Msa0053610:CDS | 25.0% |
| ! | AAATTGTATAACAGAGTGAA+AGG | - | chr1_2:8087880-8087899 | None:intergenic | 25.0% |
| ! | ATATCAAGAAGAGATCAAAA+TGG | - | chr1_2:8088033-8088052 | None:intergenic | 25.0% |
| !!! | TGCTTTTTACTCGAAAAAAA+TGG | + | chr1_2:8088052-8088071 | Msa0053610:intron | 25.0% |
| ! | AAAGAAAGTGAATAAATGAC+AGG | - | chr1_2:8088106-8088125 | None:intergenic | 25.0% |
| !! | CATGTATTTAGAATACTATG+TGG | - | chr1_2:8088218-8088237 | None:intergenic | 25.0% |
| !! | GAATTTGAAGTTTATGATTC+AGG | + | chr1_2:8088462-8088481 | Msa0053610:intron | 25.0% |
| ! | AGACTATTATAAATCTAACG+GGG | - | chr1_2:8088914-8088933 | None:intergenic | 25.0% |
| ! | ACAATTATGTTGTTATGCAA+GGG | - | chr1_2:8089074-8089093 | None:intergenic | 25.0% |
| ! | AACAATTATGTTGTTATGCA+AGG | - | chr1_2:8089075-8089094 | None:intergenic | 25.0% |
| !! | CCAAAAGAAAAACTTTTAAC+TGG | - | chr1_2:8089376-8089395 | None:intergenic | 25.0% |
| !! | CCAGTTAAAAGTTTTTCTTT+TGG | + | chr1_2:8089373-8089392 | Msa0053610:intron | 25.0% |
| ! | ATTATATGGAAAGTTTCCTA+TGG | + | chr1_2:8089682-8089701 | Msa0053610:intron | 25.0% |
| ! | TTCACTAACAGTTAAGATTT+CGG | + | chr1_2:8089735-8089754 | Msa0053610:intron | 25.0% |
| ! | AGTAACTTATTTATAGCCTT+AGG | + | chr1_2:8090012-8090031 | Msa0053610:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr1_2:8090073-8090092 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr1_2:8090074-8090093 | None:intergenic | 25.0% |
| ! | AAGCTATTCTGAATAGTTTA+TGG | + | chr1_2:8090203-8090222 | Msa0053610:intron | 25.0% |
| ! | AATCATGACGTAATTTATCA+TGG | - | chr1_2:8090661-8090680 | None:intergenic | 25.0% |
| ! | TATCCCTCTTATATAACATA+TGG | - | chr1_2:8090979-8090998 | None:intergenic | 25.0% |
| TTTCTATCTATGTGTCTTGT+TGG | - | chr1_2:8084332-8084351 | None:intergenic | 30.0% | |
| ATGAGGGAATGAAAAAAATG+GGG | - | chr1_2:8084493-8084512 | None:intergenic | 30.0% | |
| AAAAAGAACGAGGAAAATGA+GGG | - | chr1_2:8084509-8084528 | None:intergenic | 30.0% | |
| AAAAAAAACATGTATGGTGG+TGG | - | chr1_2:8084555-8084574 | None:intergenic | 30.0% | |
| ! | AGAGTTTTTGAATGTAGTGT+AGG | - | chr1_2:8084598-8084617 | None:intergenic | 30.0% |
| AAAAGTAGGTTACCTGAAAA+GGG | - | chr1_2:8084810-8084829 | None:intergenic | 30.0% | |
| AAAAAGTAGGTTACCTGAAA+AGG | - | chr1_2:8084811-8084830 | None:intergenic | 30.0% | |
| GAATGCAACATGAAAAAAGT+AGG | - | chr1_2:8084824-8084843 | None:intergenic | 30.0% | |
| ! | TTGTGATTTTGCATTTGGTT+AGG | + | chr1_2:8085004-8085023 | Msa0053610:intron | 30.0% |
| ! | TGTGATTTTGCATTTGGTTA+GGG | + | chr1_2:8085005-8085024 | Msa0053610:intron | 30.0% |
| TTGTTAAGTTTGCATGCTTA+TGG | + | chr1_2:8085058-8085077 | Msa0053610:intron | 30.0% | |
| GCTAAATATCTCCAAACAAA+AGG | - | chr1_2:8085117-8085136 | None:intergenic | 30.0% | |
| !! | AAACATCTGCTACTTTAACT+CGG | - | chr1_2:8085310-8085329 | None:intergenic | 30.0% |
| AAGTGTGTACATGAATTAGT+GGG | - | chr1_2:8085391-8085410 | None:intergenic | 30.0% | |
| ACTAATTCATGTACACACTT+CGG | + | chr1_2:8085391-8085410 | Msa0053610:five_prime_UTR | 30.0% | |
| ! | GTGTTTTGTAGCAGAAAAAA+TGG | + | chr1_2:8085443-8085462 | Msa0053610:CDS | 30.0% |
| ATTCAGAAACTTCTACTACT+AGG | + | chr1_2:8085664-8085683 | Msa0053610:CDS | 30.0% | |
| !! | TCTTAGTCTTATATGCTAAG+TGG | + | chr1_2:8085715-8085734 | Msa0053610:intron | 30.0% |
| ATACATTGTAGATTCCAACA+TGG | - | chr1_2:8085771-8085790 | None:intergenic | 30.0% | |
| !! | TACTAAATCGGTTTGTAAGA+CGG | - | chr1_2:8085903-8085922 | None:intergenic | 30.0% |
| CGATTTAGTAGGATTGAATT+AGG | + | chr1_2:8085913-8085932 | Msa0053610:intron | 30.0% | |
| ! | AAAATCTAGATGTCCAGTTT+TGG | + | chr1_2:8086002-8086021 | Msa0053610:intron | 30.0% |
| CCACTTATATAATACATTGC+AGG | - | chr1_2:8086073-8086092 | None:intergenic | 30.0% | |
| CCTGCAATGTATTATATAAG+TGG | + | chr1_2:8086070-8086089 | Msa0053610:intron | 30.0% | |
| !!! | TTTTTTTTCCGTCTCCATTA+TGG | + | chr1_2:8086197-8086216 | Msa0053610:intron | 30.0% |
| !!! | ATACTCATGTTTTTGGGATT+TGG | + | chr1_2:8086499-8086518 | Msa0053610:intron | 30.0% |
| ! | TTTGGAATAACTGATCAAAC+AGG | + | chr1_2:8086517-8086536 | Msa0053610:intron | 30.0% |
| ATGAGTATGCAATTATTTGC+AGG | - | chr1_2:8086598-8086617 | None:intergenic | 30.0% | |
| !!! | TATCAATGGTCCCTTTTTTT+AGG | + | chr1_2:8086695-8086714 | Msa0053610:intron | 30.0% |
| TCTTACCTGCTTAAATATAG+TGG | - | chr1_2:8086741-8086760 | None:intergenic | 30.0% | |
| ! | CAATAAAAGTACGCAATACT+TGG | + | chr1_2:8086918-8086937 | Msa0053610:intron | 30.0% |
| AAAACTGTAACTACAAACAG+TGG | - | chr1_2:8086994-8087013 | None:intergenic | 30.0% | |
| ! | GTTTTCTGTGAATTGTGTTT+TGG | + | chr1_2:8087009-8087028 | Msa0053610:intron | 30.0% |
| CGAAAAATCAACATCATTCT+GGG | - | chr1_2:8087118-8087137 | None:intergenic | 30.0% | |
| TCGAAAAATCAACATCATTC+TGG | - | chr1_2:8087119-8087138 | None:intergenic | 30.0% | |
| ATATCCAGTGAAAATAAGGT+AGG | + | chr1_2:8087147-8087166 | Msa0053610:intron | 30.0% | |
| GAAAAGTTATCAGAAATTGG+AGG | + | chr1_2:8087346-8087365 | Msa0053610:CDS | 30.0% | |
| !! | ATGAAATAATGGGTACAATC+TGG | - | chr1_2:8087597-8087616 | None:intergenic | 30.0% |
| AGATTGTACCCATTATTTCA+TGG | + | chr1_2:8087596-8087615 | Msa0053610:CDS | 30.0% | |
| ATTTCATGGAAAATTTGCAG+AGG | + | chr1_2:8087610-8087629 | Msa0053610:CDS | 30.0% | |
| TAAATCTTGGATACCTTTGT+TGG | - | chr1_2:8087657-8087676 | None:intergenic | 30.0% | |
| AAGAATAGTGTGCTAAATCT+TGG | - | chr1_2:8087670-8087689 | None:intergenic | 30.0% | |
| ATTTCATATCGAAAGTTCCA+TGG | + | chr1_2:8087776-8087795 | Msa0053610:intron | 30.0% | |
| TTCCATGGTTTAAGTATGTT+AGG | + | chr1_2:8087791-8087810 | Msa0053610:intron | 30.0% | |
| TTCCTCGTTATTTAGTATGA+TGG | - | chr1_2:8087818-8087837 | None:intergenic | 30.0% | |
| TCACTCTGTTATACAATTTC+AGG | + | chr1_2:8087881-8087900 | Msa0053610:intron | 30.0% | |
| AGGAAACTAAGTAATACCAA+AGG | - | chr1_2:8088086-8088105 | None:intergenic | 30.0% | |
| CAAGTTTGACAATAAAGGAT+TGG | + | chr1_2:8088271-8088290 | Msa0053610:intron | 30.0% | |
| ! | TTCTTCTTTTGTCTTTTGTC+TGG | + | chr1_2:8088396-8088415 | Msa0053610:intron | 30.0% |
| TTGTCGTGTGTTTATGATTA+AGG | + | chr1_2:8088423-8088442 | Msa0053610:intron | 30.0% | |
| TGTTTATGATTAAGGTTGCT+GGG | + | chr1_2:8088431-8088450 | Msa0053610:intron | 30.0% | |
| TGAATTCTTTGGCAAGATTT+GGG | + | chr1_2:8088500-8088519 | Msa0053610:intron | 30.0% | |
| TAAGAAGTGAAGCGATAAAA+AGG | - | chr1_2:8088782-8088801 | None:intergenic | 30.0% | |
| ATTTATAACAAGAGTGACAC+CGG | - | chr1_2:8088840-8088859 | None:intergenic | 30.0% | |
| CAATTATGTTGTTATGCAAG+GGG | - | chr1_2:8089073-8089092 | None:intergenic | 30.0% | |
| !!! | TTTTCTTGTTTTCTCCAACA+GGG | - | chr1_2:8089119-8089138 | None:intergenic | 30.0% |
| TAATTGCGCAACAAATCAAA+AGG | + | chr1_2:8089341-8089360 | Msa0053610:intron | 30.0% | |
| TATTTCATGCCAGTACTTTA+AGG | + | chr1_2:8089428-8089447 | Msa0053610:intron | 30.0% | |
| ATTTCATGCCAGTACTTTAA+GGG | + | chr1_2:8089429-8089448 | Msa0053610:intron | 30.0% | |
| ! | AATTTGTTCCCTTAAAGTAC+TGG | - | chr1_2:8089440-8089459 | None:intergenic | 30.0% |
| !! | AAAAAGTGTTTGATCATACC+TGG | - | chr1_2:8089555-8089574 | None:intergenic | 30.0% |
| !! | GTATGATCAAACACTTTTTG+AGG | + | chr1_2:8089556-8089575 | Msa0053610:CDS | 30.0% |
| TGAAAACAAGAACAGAATGA+TGG | + | chr1_2:8089580-8089599 | Msa0053610:CDS | 30.0% | |
| !! | AGACAAAAGAACTTTTTGAG+TGG | + | chr1_2:8089603-8089622 | Msa0053610:CDS | 30.0% |
| !!! | GACAAAAGAACTTTTTGAGT+GGG | + | chr1_2:8089604-8089623 | Msa0053610:CDS | 30.0% |
| TCTTAACTGTTAGTGAAGAA+TGG | - | chr1_2:8089732-8089751 | None:intergenic | 30.0% | |
| AAAAGAGAAAGACATGAGAT+AGG | - | chr1_2:8089761-8089780 | None:intergenic | 30.0% | |
| CTTGTTCAAAAATAGCATGA+AGG | - | chr1_2:8089799-8089818 | None:intergenic | 30.0% | |
| ! | TCTAATGTTTTGTATTGTGC+AGG | + | chr1_2:8089907-8089926 | Msa0053610:intron | 30.0% |
| ! | GCATTAGTTTACAAATGCTT+AGG | - | chr1_2:8090524-8090543 | None:intergenic | 30.0% |
| TAATTCCTATGAACTTGTAG+TGG | - | chr1_2:8090707-8090726 | None:intergenic | 30.0% | |
| ! | ATGGACAAACTCTTTATTTC+AGG | + | chr1_2:8090764-8090783 | Msa0053610:intron | 30.0% |
| GTTCGTGAAGAAAAAATTTG+AGG | + | chr1_2:8090786-8090805 | Msa0053610:CDS | 30.0% | |
| TCCTATATATCTTAAACACG+CGG | - | chr1_2:8090849-8090868 | None:intergenic | 30.0% | |
| TGGACCATATGTTATATAAG+AGG | + | chr1_2:8090972-8090991 | Msa0053610:three_prime_UTR | 30.0% | |
| GGACCATATGTTATATAAGA+GGG | + | chr1_2:8090973-8090992 | Msa0053610:three_prime_UTR | 30.0% | |
| !! | TTTTGGGTATACTAGAAGTA+AGG | + | chr1_2:8091031-8091050 | Msa0053610:three_prime_UTR | 30.0% |
| ATCTCCACATTCATCTTTAA+AGG | + | chr1_2:8091144-8091163 | Msa0053610:three_prime_UTR | 30.0% | |
| TCTCCACATTCATCTTTAAA+GGG | + | chr1_2:8091145-8091164 | Msa0053610:three_prime_UTR | 30.0% | |
| ! | AAGTGCAAAGAAAGTACAAG+TGG | + | chr1_2:8084290-8084309 | Msa0053610:five_prime_UTR | 35.0% |
| GTCAAAGATTGGAAAAAGAC+AGG | - | chr1_2:8084406-8084425 | None:intergenic | 35.0% | |
| !!! | GTTTGGTTTTGGTCAAAGAT+TGG | - | chr1_2:8084417-8084436 | None:intergenic | 35.0% |
| !! | TTCTTGTTCGTGTTTGGTTT+TGG | - | chr1_2:8084428-8084447 | None:intergenic | 35.0% |
| GAAAAAGAACGAGGAAAATG+AGG | - | chr1_2:8084510-8084529 | None:intergenic | 35.0% | |
| ! | TTGAGAAATTTTATCTGGGC+TGG | + | chr1_2:8084873-8084892 | Msa0053610:intron | 35.0% |
| ! | GCTATGCTAGTTCTCTTATT+AGG | + | chr1_2:8085355-8085374 | Msa0053610:intron | 35.0% |
| GAAGTGTGTACATGAATTAG+TGG | - | chr1_2:8085392-8085411 | None:intergenic | 35.0% | |
| GCTTACTTTGTAGCAAAAGT+CGG | + | chr1_2:8085466-8085485 | Msa0053610:CDS | 35.0% | |
| AAAGTTGAACTTTGCCATGT+TGG | + | chr1_2:8085754-8085773 | Msa0053610:intron | 35.0% | |
| !! | ACTAAATCGGTTTGTAAGAC+GGG | - | chr1_2:8085902-8085921 | None:intergenic | 35.0% |
| ! | GTCTTACAAACCGATTTAGT+AGG | + | chr1_2:8085902-8085921 | Msa0053610:intron | 35.0% |
| AGGTCATTTCTCATCTAATG+TGG | - | chr1_2:8086053-8086072 | None:intergenic | 35.0% | |
| ACTTATGAACTCTCGGTATT+CGG | - | chr1_2:8086129-8086148 | None:intergenic | 35.0% | |
| ACAGACTACTTATGAACTCT+CGG | - | chr1_2:8086136-8086155 | None:intergenic | 35.0% | |
| !! | TAACGAGAGCATTGAATGTT+TGG | - | chr1_2:8086177-8086196 | None:intergenic | 35.0% |
| !! | AGTTTTCTCCATAATGGAGA+CGG | - | chr1_2:8086208-8086227 | None:intergenic | 35.0% |
| ! | GATGACAGTTTTCTCCATAA+TGG | - | chr1_2:8086214-8086233 | None:intergenic | 35.0% |
| TGTATTCAACTTCCGATTGA+GGG | + | chr1_2:8086271-8086290 | Msa0053610:intron | 35.0% | |
| GAAATCAAGTAACCCTCAAT+CGG | - | chr1_2:8086286-8086305 | None:intergenic | 35.0% | |
| ACTAGATGAAAGCTCGTAAA+TGG | - | chr1_2:8086331-8086350 | None:intergenic | 35.0% | |
| GAAGTCCACTATATTTAAGC+AGG | + | chr1_2:8086733-8086752 | Msa0053610:CDS | 35.0% | |
| AACAATCAAGTACACACACA+CGG | - | chr1_2:8086790-8086809 | None:intergenic | 35.0% | |
| !! | ATTTCAAACTGGCTTTGATG+AGG | + | chr1_2:8086847-8086866 | Msa0053610:CDS | 35.0% |
| AAAGTACGCAATACTTGGAA+AGG | + | chr1_2:8086923-8086942 | Msa0053610:intron | 35.0% | |
| AAGTACGCAATACTTGGAAA+GGG | + | chr1_2:8086924-8086943 | Msa0053610:intron | 35.0% | |
| TTTCTACAGTTACTTCACGA+CGG | + | chr1_2:8087078-8087097 | Msa0053610:intron | 35.0% | |
| !!! | TTGACCTACCTTATTTTCAC+TGG | - | chr1_2:8087154-8087173 | None:intergenic | 35.0% |
| TAGAGCAACCAATTGTATGT+AGG | + | chr1_2:8087214-8087233 | Msa0053610:intron | 35.0% | |
| ! | TAATTTTCCTGACAGGACAT+TGG | + | chr1_2:8087322-8087341 | Msa0053610:intron | 35.0% |
| GGCGAAAAGTTATCAGAAAT+TGG | + | chr1_2:8087343-8087362 | Msa0053610:CDS | 35.0% | |
| !!! | CTTAGTCCTTCGTTGTTTTT+CGG | + | chr1_2:8087493-8087512 | Msa0053610:intron | 35.0% |
| CTGCATGTTATACTTTCTGT+AGG | + | chr1_2:8087539-8087558 | Msa0053610:intron | 35.0% | |
| GACCTAACATACTTAAACCA+TGG | - | chr1_2:8087796-8087815 | None:intergenic | 35.0% | |
| GTCCATCATACTAAATAACG+AGG | + | chr1_2:8087813-8087832 | Msa0053610:intron | 35.0% | |
| CTCTGTTATACAATTTCAGG+AGG | + | chr1_2:8087884-8087903 | Msa0053610:intron | 35.0% | |
| ATCACTCAGAAACGCTTATT+CGG | + | chr1_2:8087995-8088014 | Msa0053610:intron | 35.0% | |
| AAGTAATACCAAAGGCCAAA+GGG | - | chr1_2:8088078-8088097 | None:intergenic | 35.0% | |
| TAAGTAATACCAAAGGCCAA+AGG | - | chr1_2:8088079-8088098 | None:intergenic | 35.0% | |
| GTAGTAAACCCTTTAAACAC+TGG | + | chr1_2:8088142-8088161 | Msa0053610:intron | 35.0% | |
| !! | TAAAACTCCTTTTTCGTCAG+AGG | - | chr1_2:8088171-8088190 | None:intergenic | 35.0% |
| CAAACTTGAAATTCGCAAGT+CGG | - | chr1_2:8088259-8088278 | None:intergenic | 35.0% | |
| TTCTCTATGCTGTGTTTCAA+AGG | + | chr1_2:8088308-8088327 | Msa0053610:intron | 35.0% | |
| GTGTTTATGATTAAGGTTGC+TGG | + | chr1_2:8088430-8088449 | Msa0053610:intron | 35.0% | |
| CAAATCTTGCCAAAGAATTC+AGG | - | chr1_2:8088501-8088520 | None:intergenic | 35.0% | |
| CTGAATTCTTTGGCAAGATT+TGG | + | chr1_2:8088499-8088518 | Msa0053610:intron | 35.0% | |
| TTCGTTAAGACTAAGAACAC+CGG | - | chr1_2:8088526-8088545 | None:intergenic | 35.0% | |
| ATGACCGTTTCCATAAATTC+TGG | + | chr1_2:8088641-8088660 | Msa0053610:intron | 35.0% | |
| CCTACCAGAATTTATGGAAA+CGG | - | chr1_2:8088648-8088667 | None:intergenic | 35.0% | |
| TTCCATAAATTCTGGTAGGA+AGG | + | chr1_2:8088649-8088668 | Msa0053610:intron | 35.0% | |
| TGAAGCGATAAAAAGGTCAA+AGG | - | chr1_2:8088775-8088794 | None:intergenic | 35.0% | |
| ! | CACCTTCATTATTTGAAGCT+TGG | + | chr1_2:8089017-8089036 | Msa0053610:intron | 35.0% |
| CACCAAGCTTCAAATAATGA+AGG | - | chr1_2:8089022-8089041 | None:intergenic | 35.0% | |
| !!! | CTTTTCTTGTTTTCTCCAAC+AGG | - | chr1_2:8089120-8089139 | None:intergenic | 35.0% |
| GTTGGAGAAAACAAGAAAAG+TGG | + | chr1_2:8089120-8089139 | Msa0053610:CDS | 35.0% | |
| GTCTATAGACTGTTTGATGT+CGG | + | chr1_2:8089147-8089166 | Msa0053610:CDS | 35.0% | |
| AAATGGATCCATCTGTTTGA+AGG | + | chr1_2:8089192-8089211 | Msa0053610:CDS | 35.0% | |
| TCTTTGCCAATGATATCGAA+GGG | - | chr1_2:8089474-8089493 | None:intergenic | 35.0% | |
| GGGAACAGAAAAAATTCCAT+AGG | - | chr1_2:8089701-8089720 | None:intergenic | 35.0% | |
| CATATTTGAGAAGAAGATCC+TGG | + | chr1_2:8089824-8089843 | Msa0053610:CDS | 35.0% | |
| TTGACAAAGTGTATGAGGTT+AGG | - | chr1_2:8089863-8089882 | None:intergenic | 35.0% | |
| AACCTCATACACTTTGTCAA+TGG | + | chr1_2:8089863-8089882 | Msa0053610:intron | 35.0% | |
| AACCACTCACATACATTAAG+CGG | - | chr1_2:8089935-8089954 | None:intergenic | 35.0% | |
| ! | ATGTTCAATCTCTTGTTTCC+CGG | - | chr1_2:8089981-8090000 | None:intergenic | 35.0% |
| ! | GATGAAAATAGCTTGTGACA+TGG | - | chr1_2:8090253-8090272 | None:intergenic | 35.0% |
| ACAAGCTTCAACATGAGTAT+GGG | - | chr1_2:8090337-8090356 | None:intergenic | 35.0% | |
| TACAAGCTTCAACATGAGTA+TGG | - | chr1_2:8090338-8090357 | None:intergenic | 35.0% | |
| TTTCTTACCTACGTTGAAAG+TGG | + | chr1_2:8090679-8090698 | Msa0053610:intron | 35.0% | |
| ! | ACCGCGTGTTTAAGATATAT+AGG | + | chr1_2:8090845-8090864 | Msa0053610:CDS | 35.0% |
| ! | TTGTTGATGAGACTTTGAGA+CGG | + | chr1_2:8090911-8090930 | Msa0053610:CDS | 35.0% |
| ATAACATATGGTCCACTCAT+TGG | - | chr1_2:8090967-8090986 | None:intergenic | 35.0% | |
| ! | AAGAGGTGAGATCAGATTTT+GGG | + | chr1_2:8091015-8091034 | Msa0053610:three_prime_UTR | 35.0% |
| AAAATCTTTGTTGGAGTGAG+TGG | + | chr1_2:8091095-8091114 | Msa0053610:three_prime_UTR | 35.0% | |
| ! | CTCCACATTCATCTTTAAAG+GGG | + | chr1_2:8091146-8091165 | Msa0053610:three_prime_UTR | 35.0% |
| ! | TTCCCCTTTAAAGATGAATG+TGG | - | chr1_2:8091151-8091170 | None:intergenic | 35.0% |
| ! | TGCAAAGAAAGTACAAGTGG+TGG | + | chr1_2:8084293-8084312 | Msa0053610:five_prime_UTR | 40.0% |
| ACAGGAACATACATACACAC+AGG | - | chr1_2:8084388-8084407 | None:intergenic | 40.0% | |
| !! | TAAAGAAAAAGAGCGCCGAA+AGG | - | chr1_2:8084469-8084488 | None:intergenic | 40.0% |
| ! | TAACAACAACGACCCTTTTC+AGG | + | chr1_2:8084795-8084814 | Msa0053610:five_prime_UTR | 40.0% |
| !! | ATTTGGTTAGGGTACCGATT+TGG | + | chr1_2:8085016-8085035 | Msa0053610:intron | 40.0% |
| AAAGACCCAACCAACTAATC+CGG | - | chr1_2:8085247-8085266 | None:intergenic | 40.0% | |
| ! | GATTAGTTGGTTGGGTCTTT+GGG | + | chr1_2:8085247-8085266 | Msa0053610:intron | 40.0% |
| ! | CTGTGCATTTTCTTCAGTGT+TGG | - | chr1_2:8085505-8085524 | None:intergenic | 40.0% |
| CAACACTGAAGAAAATGCAC+AGG | + | chr1_2:8085503-8085522 | Msa0053610:CDS | 40.0% | |
| !! | TAAATCGGTTTGTAAGACGG+GGG | - | chr1_2:8085900-8085919 | None:intergenic | 40.0% |
| !! | CTAAATCGGTTTGTAAGACG+GGG | - | chr1_2:8085901-8085920 | None:intergenic | 40.0% |
| ! | CTAGATTTTTACCCGAAAGC+AGG | - | chr1_2:8085991-8086010 | None:intergenic | 40.0% |
| !!! | ATGTCCAGTTTTGGACATGA+CGG | + | chr1_2:8086011-8086030 | Msa0053610:intron | 40.0% |
| CTTATGAACTCTCGGTATTC+GGG | - | chr1_2:8086128-8086147 | None:intergenic | 40.0% | |
| AGTTCATAAGTAGTCTGTGC+AGG | + | chr1_2:8086138-8086157 | Msa0053610:intron | 40.0% | |
| ACTGTCATCTTTGCAGCATA+AGG | + | chr1_2:8086225-8086244 | Msa0053610:intron | 40.0% | |
| GTGTATTCAACTTCCGATTG+AGG | + | chr1_2:8086270-8086289 | Msa0053610:intron | 40.0% | |
| ! | ATCTAGTAGCCTGAGCTTTT+GGG | + | chr1_2:8086344-8086363 | Msa0053610:intron | 40.0% |
| GGGATAGTTGGCTATTGATA+TGG | + | chr1_2:8086364-8086383 | Msa0053610:intron | 40.0% | |
| CTCTCCAGCTCCTAAAAAAA+GGG | - | chr1_2:8086708-8086727 | None:intergenic | 40.0% | |
| ACTCTCCAGCTCCTAAAAAA+AGG | - | chr1_2:8086709-8086728 | None:intergenic | 40.0% | |
| !!! | TTTTTTAGGAGCTGGAGAGT+CGG | + | chr1_2:8086709-8086728 | Msa0053610:intron | 40.0% |
| TAGACATTGGCATGAATGAC+TGG | - | chr1_2:8086893-8086912 | None:intergenic | 40.0% | |
| !!! | GAATTGTGTTTTGGTTGAGC+TGG | + | chr1_2:8087018-8087037 | Msa0053610:intron | 40.0% |
| ! | GCTCTCATAATTTTCCTGAC+AGG | + | chr1_2:8087315-8087334 | Msa0053610:intron | 40.0% |
| CACAAGAAATAGAGAGTCTG+TGG | + | chr1_2:8087404-8087423 | Msa0053610:CDS | 40.0% | |
| AGAAATAGAGAGTCTGTGGA+AGG | + | chr1_2:8087408-8087427 | Msa0053610:CDS | 40.0% | |
| CTGATACCGAAAAACAACGA+AGG | - | chr1_2:8087502-8087521 | None:intergenic | 40.0% | |
| ! | AATGGGTACAATCTGGAACT+TGG | - | chr1_2:8087590-8087609 | None:intergenic | 40.0% |
| ! | TTTTGTCACATTGTGGGTCT+TGG | + | chr1_2:8087739-8087758 | Msa0053610:intron | 40.0% |
| TTTGTCACATTGTGGGTCTT+GGG | + | chr1_2:8087740-8087759 | Msa0053610:intron | 40.0% | |
| GTGTTGTAGAGATTCAGTTC+AGG | + | chr1_2:8087937-8087956 | Msa0053610:CDS | 40.0% | |
| ACTCGAAAAAAATGGCCCTT+TGG | + | chr1_2:8088060-8088079 | Msa0053610:intron | 40.0% | |
| AGAGGACACCAGTGTTTAAA+GGG | - | chr1_2:8088153-8088172 | None:intergenic | 40.0% | |
| GAAACACAGCATAGAGAAGA+AGG | - | chr1_2:8088306-8088325 | None:intergenic | 40.0% | |
| GAAGAAACAATGACACGTAG+AGG | - | chr1_2:8088382-8088401 | None:intergenic | 40.0% | |
| TGCTAGTTGCCTGAATTCTT+TGG | + | chr1_2:8088489-8088508 | Msa0053610:intron | 40.0% | |
| CCGTTTCCATAAATTCTGGT+AGG | + | chr1_2:8088645-8088664 | Msa0053610:intron | 40.0% | |
| GTCCTTCCTACCAGAATTTA+TGG | - | chr1_2:8088654-8088673 | None:intergenic | 40.0% | |
| AAATTCTGGTAGGAAGGACA+AGG | + | chr1_2:8088655-8088674 | Msa0053610:intron | 40.0% | |
| TGTTAGTATTATGATGGCCG+TGG | + | chr1_2:8088741-8088760 | Msa0053610:intron | 40.0% | |
| CTGTATTTAGCCCATTAGTC+AGG | + | chr1_2:8088888-8088907 | Msa0053610:intron | 40.0% | |
| !!! | TGTTATTTTGACAGCCCTGT+TGG | + | chr1_2:8089102-8089121 | Msa0053610:intron | 40.0% |
| TATAGACTGTTTGATGTCGG+TGG | + | chr1_2:8089150-8089169 | Msa0053610:CDS | 40.0% | |
| ATTTCCTCCTCTCATTTCTC+TGG | - | chr1_2:8089176-8089195 | None:intergenic | 40.0% | |
| AGAGAAATGAGAGGAGGAAA+TGG | + | chr1_2:8089175-8089194 | Msa0053610:CDS | 40.0% | |
| CTGAAACTCCTTCAAACAGA+TGG | - | chr1_2:8089203-8089222 | None:intergenic | 40.0% | |
| GTGTATCCCTTCGATATCAT+TGG | + | chr1_2:8089465-8089484 | Msa0053610:intron | 40.0% | |
| GTCTTTGCCAATGATATCGA+AGG | - | chr1_2:8089475-8089494 | None:intergenic | 40.0% | |
| ! | CCTCAAAACATTGTTGCTTC+AGG | - | chr1_2:8089631-8089650 | None:intergenic | 40.0% |
| ! | CCTGAAGCAACAATGTTTTG+AGG | + | chr1_2:8089628-8089647 | Msa0053610:CDS | 40.0% |
| ! | AGTGAAGAATGGAGCTCTAA+GGG | - | chr1_2:8089721-8089740 | None:intergenic | 40.0% |
| TAGTGAAGAATGGAGCTCTA+AGG | - | chr1_2:8089722-8089741 | None:intergenic | 40.0% | |
| CACCATTGACAAAGTGTATG+AGG | - | chr1_2:8089868-8089887 | None:intergenic | 40.0% | |
| CTCATACACTTTGTCAATGG+TGG | + | chr1_2:8089866-8089885 | Msa0053610:intron | 40.0% | |
| ATACACTTTGTCAATGGTGG+AGG | + | chr1_2:8089869-8089888 | Msa0053610:intron | 40.0% | |
| ACCACTCACATACATTAAGC+GGG | - | chr1_2:8089934-8089953 | None:intergenic | 40.0% | |
| AGGCTATAATTCAACGCCTA+AGG | - | chr1_2:8090031-8090050 | None:intergenic | 40.0% | |
| AATTTGGCGCTTATAGCACA+AGG | + | chr1_2:8090091-8090110 | Msa0053610:intron | 40.0% | |
| ATTTGGCGCTTATAGCACAA+GGG | + | chr1_2:8090092-8090111 | Msa0053610:intron | 40.0% | |
| !! | AAGCACTTCTGAGACTGTTT+CGG | - | chr1_2:8090275-8090294 | None:intergenic | 40.0% |
| CAAGCTTCAACATGAGTATG+GGG | - | chr1_2:8090336-8090355 | None:intergenic | 40.0% | |
| TGGTACCACTACAAGTTCAT+AGG | + | chr1_2:8090699-8090718 | Msa0053610:intron | 40.0% | |
| TACAGCGCAACGAATTAACA+TGG | + | chr1_2:8090745-8090764 | Msa0053610:intron | 40.0% | |
| ATATTTCCAGAACACTGCTC+CGG | + | chr1_2:8090813-8090832 | Msa0053610:CDS | 40.0% | |
| ATGTCTTCTTCACAACCTTC+TGG | - | chr1_2:8090885-8090904 | None:intergenic | 40.0% | |
| ! | GAAGAGGTGAGATCAGATTT+TGG | + | chr1_2:8091014-8091033 | Msa0053610:three_prime_UTR | 40.0% |
| CAATTATGTGCGTGAGTTCG+AGG | + | chr1_2:8084253-8084272 | Msa0053610:five_prime_UTR | 45.0% | |
| ! | GGCTTGTTCTTGTTCGTGTT+TGG | - | chr1_2:8084434-8084453 | None:intergenic | 45.0% |
| GCCTTACCAGAATCACCTTT+CGG | + | chr1_2:8084451-8084470 | Msa0053610:five_prime_UTR | 45.0% | |
| !! | ATGGTGGTGGTTGTTGATAC+TGG | - | chr1_2:8084542-8084561 | None:intergenic | 45.0% |
| !! | AGCCAAAGCAAAGCTCTGAA+CGG | - | chr1_2:8085186-8085205 | None:intergenic | 45.0% |
| ! | GCTTTGCTTTGGCTTCGATT+AGG | + | chr1_2:8085192-8085211 | Msa0053610:intron | 45.0% |
| AATCCCTCAGTACACTAAGG+GGG | - | chr1_2:8085218-8085237 | None:intergenic | 45.0% | |
| CAATCCCTCAGTACACTAAG+GGG | - | chr1_2:8085219-8085238 | None:intergenic | 45.0% | |
| CCAATCCCTCAGTACACTAA+GGG | - | chr1_2:8085220-8085239 | None:intergenic | 45.0% | |
| ACCAATCCCTCAGTACACTA+AGG | - | chr1_2:8085221-8085240 | None:intergenic | 45.0% | |
| AAGACCCAACCAACTAATCC+GGG | - | chr1_2:8085246-8085265 | None:intergenic | 45.0% | |
| !! | GGATTAGTTGGTTGGGTCTT+TGG | + | chr1_2:8085246-8085265 | Msa0053610:intron | 45.0% |
| ATTCATGTACACACTTCGGC+TGG | + | chr1_2:8085395-8085414 | Msa0053610:five_prime_UTR | 45.0% | |
| GGCATAACCTGAATTCCAAG+CGG | + | chr1_2:8085934-8085953 | Msa0053610:intron | 45.0% | |
| TCTGATACCGCTTGGAATTC+AGG | - | chr1_2:8085944-8085963 | None:intergenic | 45.0% | |
| TGGTCGAATGGATCTTGGAT+AGG | - | chr1_2:8085968-8085987 | None:intergenic | 45.0% | |
| ! | GATTTTTACCCGAAAGCAGG+TGG | - | chr1_2:8085988-8086007 | None:intergenic | 45.0% |
| !!! | TGTCCAGTTTTGGACATGAC+GGG | + | chr1_2:8086012-8086031 | Msa0053610:intron | 45.0% |
| ! | CATCTAGTAGCCTGAGCTTT+TGG | + | chr1_2:8086343-8086362 | Msa0053610:intron | 45.0% |
| GTATCAAGCTTCTGACCAAG+TGG | + | chr1_2:8086386-8086405 | Msa0053610:intron | 45.0% | |
| ATGATCAACTCGTGACCACT+TGG | - | chr1_2:8086404-8086423 | None:intergenic | 45.0% | |
| !!! | TGGTCCCTTTTTTTAGGAGC+TGG | + | chr1_2:8086701-8086720 | Msa0053610:intron | 45.0% |
| !! | TTTTTAGGAGCTGGAGAGTC+GGG | + | chr1_2:8086710-8086729 | Msa0053610:intron | 45.0% |
| ! | ACACACACGGTGCTAAGATA+CGG | - | chr1_2:8086777-8086796 | None:intergenic | 45.0% |
| CATTGGCATGAATGACTGGT+AGG | - | chr1_2:8086889-8086908 | None:intergenic | 45.0% | |
| TGATTACCCTCGTCTCACTA+AGG | + | chr1_2:8087375-8087394 | Msa0053610:CDS | 45.0% | |
| CAAGTTCCTTAGTGAGACGA+GGG | - | chr1_2:8087384-8087403 | None:intergenic | 45.0% | |
| AACTTGGAGCTCATTACCAC+GGG | - | chr1_2:8087574-8087593 | None:intergenic | 45.0% | |
| GAACTTGGAGCTCATTACCA+CGG | - | chr1_2:8087575-8087594 | None:intergenic | 45.0% | |
| !! | TGCCTGCTTTTGTCACATTG+TGG | + | chr1_2:8087732-8087751 | Msa0053610:intron | 45.0% |
| !! | GCCTGCTTTTGTCACATTGT+GGG | + | chr1_2:8087733-8087752 | Msa0053610:intron | 45.0% |
| ACCCACAATGTGACAAAAGC+AGG | - | chr1_2:8087737-8087756 | None:intergenic | 45.0% | |
| CTGAATCTCTACAACACCAG+TGG | - | chr1_2:8087934-8087953 | None:intergenic | 45.0% | |
| GAAGAGATCAAAATGGCGAC+AGG | - | chr1_2:8088026-8088045 | None:intergenic | 45.0% | |
| ! | AAAAATGGCCCTTTGGCCTT+TGG | + | chr1_2:8088067-8088086 | Msa0053610:intron | 45.0% |
| CAGAGGACACCAGTGTTTAA+AGG | - | chr1_2:8088154-8088173 | None:intergenic | 45.0% | |
| GCATAGAGAAGAAGGAACAC+TGG | - | chr1_2:8088298-8088317 | None:intergenic | 45.0% | |
| TTCTTTGGCAAGATTTGGGC+CGG | + | chr1_2:8088504-8088523 | Msa0053610:intron | 45.0% | |
| CACCAAACCAACCTTACATC+CGG | + | chr1_2:8088818-8088837 | Msa0053610:intron | 45.0% | |
| TGTGTTGCGATTAGCGAGTA+TGG | + | chr1_2:8089234-8089253 | Msa0053610:intron | 45.0% | |
| TGACATCTCACTTGCTTTCC+AGG | + | chr1_2:8089534-8089553 | Msa0053610:intron | 45.0% | |
| ! | TTAGGCTGGTTCTTACATCC+AGG | - | chr1_2:8089845-8089864 | None:intergenic | 45.0% |
| CAAAGTGTATGAGGTTAGGC+TGG | - | chr1_2:8089859-8089878 | None:intergenic | 45.0% | |
| TCCCGCTTAATGTATGTGAG+TGG | + | chr1_2:8089930-8089949 | Msa0053610:CDS | 45.0% | |
| ! | TCTTGTTTCCCGGTTGAAAG+TGG | - | chr1_2:8089971-8089990 | None:intergenic | 45.0% |
| !! | AGCCTTGAGCATTGAAGACT+TGG | + | chr1_2:8090046-8090065 | Msa0053610:intron | 45.0% |
| !! | GCCTTGAGCATTGAAGACTT+GGG | + | chr1_2:8090047-8090066 | Msa0053610:intron | 45.0% |
| AACATGAGTATGGGGAAGCT+TGG | - | chr1_2:8090328-8090347 | None:intergenic | 45.0% | |
| AGTGGTACCACTTTCAACGT+AGG | - | chr1_2:8090689-8090708 | None:intergenic | 45.0% | |
| !! | TTGATGAGACTTTGAGACGG+AGG | + | chr1_2:8090914-8090933 | Msa0053610:CDS | 45.0% |
| !! | GGCTTGTTATGACCAATGAG+TGG | + | chr1_2:8090952-8090971 | Msa0053610:exon | 45.0% |
| TCTTTGTTGGAGTGAGTGGA+TGG | + | chr1_2:8091099-8091118 | Msa0053610:three_prime_UTR | 45.0% | |
| GCCGAAAGGTGATTCTGGTA+AGG | - | chr1_2:8084455-8084474 | None:intergenic | 50.0% | |
| !! | AAGCAAAGCTCTGAACGGAC+TGG | - | chr1_2:8085181-8085200 | None:intergenic | 50.0% |
| GTCCGTTCAGAGCTTTGCTT+TGG | + | chr1_2:8085181-8085200 | Msa0053610:intron | 50.0% | |
| CCCTTAGTGTACTGAGGGAT+TGG | + | chr1_2:8085217-8085236 | Msa0053610:intron | 50.0% | |
| AGACCCAACCAACTAATCCG+GGG | - | chr1_2:8085245-8085264 | None:intergenic | 50.0% | |
| TCCATTCGACCACCTGCTTT+CGG | + | chr1_2:8085976-8085995 | Msa0053610:intron | 50.0% | |
| ACACCCGTCATGTCCAAAAC+TGG | - | chr1_2:8086018-8086037 | None:intergenic | 50.0% | |
| ! | GAACTCTCGGTATTCGGGTT+GGG | - | chr1_2:8086123-8086142 | None:intergenic | 50.0% |
| TGAACTCTCGGTATTCGGGT+TGG | - | chr1_2:8086124-8086143 | None:intergenic | 50.0% | |
| !!! | GCCTGAGCTTTTGGGATAGT+TGG | + | chr1_2:8086352-8086371 | Msa0053610:intron | 50.0% |
| GCCAACTATCCCAAAAGCTC+AGG | - | chr1_2:8086356-8086375 | None:intergenic | 50.0% | |
| !! | TTTTAGGAGCTGGAGAGTCG+GGG | + | chr1_2:8086711-8086730 | Msa0053610:intron | 50.0% |
| ! | CTTTTCGCCAATGTCCTGTC+AGG | - | chr1_2:8087332-8087351 | None:intergenic | 50.0% |
| GCAAGTTCCTTAGTGAGACG+AGG | - | chr1_2:8087385-8087404 | None:intergenic | 50.0% | |
| GTGGAAGGATGCTGCAATTC+AGG | + | chr1_2:8087423-8087442 | Msa0053610:CDS | 50.0% | |
| CTGTAGGAAACATATGCCCG+TGG | + | chr1_2:8087555-8087574 | Msa0053610:intron | 50.0% | |
| CTTGCAAGAGTTCGTACCAC+TGG | + | chr1_2:8087915-8087934 | Msa0053610:CDS | 50.0% | |
| CTGGTGTCCTCTGACGAAAA+AGG | + | chr1_2:8088161-8088180 | Msa0053610:intron | 50.0% | |
| CTTGAAATTCGCAAGTCGGC+AGG | - | chr1_2:8088255-8088274 | None:intergenic | 50.0% | |
| GTAGGAAGGACAAGGCATGT+CGG | + | chr1_2:8088663-8088682 | Msa0053610:intron | 50.0% | |
| GGTCAAAGGTTCGATCACCA+CGG | - | chr1_2:8088761-8088780 | None:intergenic | 50.0% | |
| !! | TAAGGTTGGTTTGGTGGCTG+GGG | - | chr1_2:8088814-8088833 | None:intergenic | 50.0% |
| !! | GTAAGGTTGGTTTGGTGGCT+GGG | - | chr1_2:8088815-8088834 | None:intergenic | 50.0% |
| !! | TGTAAGGTTGGTTTGGTGGC+TGG | - | chr1_2:8088816-8088835 | None:intergenic | 50.0% |
| !! | CGGATGTAAGGTTGGTTTGG+TGG | - | chr1_2:8088820-8088839 | None:intergenic | 50.0% |
| ! | CACCGGATGTAAGGTTGGTT+TGG | - | chr1_2:8088823-8088842 | None:intergenic | 50.0% |
| AGTGACACCGGATGTAAGGT+TGG | - | chr1_2:8088828-8088847 | None:intergenic | 50.0% | |
| CAAGAGTGACACCGGATGTA+AGG | - | chr1_2:8088832-8088851 | None:intergenic | 50.0% | |
| TCTAACGGGGCCTGACTAAT+GGG | - | chr1_2:8088901-8088920 | None:intergenic | 50.0% | |
| ATCTAACGGGGCCTGACTAA+TGG | - | chr1_2:8088902-8088921 | None:intergenic | 50.0% | |
| ! | GACTACCAGCCACTTTCAAC+CGG | + | chr1_2:8089959-8089978 | Msa0053610:CDS | 50.0% |
| ! | ACTACCAGCCACTTTCAACC+GGG | + | chr1_2:8089960-8089979 | Msa0053610:CDS | 50.0% |
| GCCCAAGTCTTCAATGCTCA+AGG | - | chr1_2:8090051-8090070 | None:intergenic | 50.0% | |
| TTGAAGACTTGGGCCCTGTT+TGG | + | chr1_2:8090057-8090076 | Msa0053610:intron | 50.0% | |
| TGAGTATGGGGAAGCTTGGA+TGG | - | chr1_2:8090324-8090343 | None:intergenic | 50.0% | |
| AATTCGTTGCGCTGTACTGC+TGG | - | chr1_2:8090741-8090760 | None:intergenic | 50.0% | |
| AACCTTCTGGTCAAGTGCAG+TGG | - | chr1_2:8090872-8090891 | None:intergenic | 50.0% | |
| GAGACGGAGGAATCTCTTTG+AGG | + | chr1_2:8090927-8090946 | Msa0053610:CDS | 50.0% | |
| TGGAGTGAGTGGATGGAGAA+AGG | + | chr1_2:8091106-8091125 | Msa0053610:three_prime_UTR | 50.0% | |
| !! | AGAGCGCCGAAAGGTGATTC+TGG | - | chr1_2:8084460-8084479 | None:intergenic | 55.0% |
| TAGGCCCCCTTAGTGTACTG+AGG | + | chr1_2:8085211-8085230 | Msa0053610:intron | 55.0% | |
| AGGCCCCCTTAGTGTACTGA+GGG | + | chr1_2:8085212-8085231 | Msa0053610:intron | 55.0% | |
| !! | GATTGGTCCCCCGGATTAGT+TGG | + | chr1_2:8085234-8085253 | Msa0053610:intron | 55.0% |
| !! | GTCCCCCGGATTAGTTGGTT+GGG | + | chr1_2:8085239-8085258 | Msa0053610:intron | 55.0% |
| GACCCAACCAACTAATCCGG+GGG | - | chr1_2:8085244-8085263 | None:intergenic | 55.0% | |
| AGTTGGTTGGGTCTTTGGGC+CGG | + | chr1_2:8085251-8085270 | Msa0053610:intron | 55.0% | |
| ! | GGATAGGCTCTGATACCGCT+TGG | - | chr1_2:8085952-8085971 | None:intergenic | 55.0% |
| GCAGGTGGTCGAATGGATCT+TGG | - | chr1_2:8085973-8085992 | None:intergenic | 55.0% | |
| CCATTCGACCACCTGCTTTC+GGG | + | chr1_2:8085977-8085996 | Msa0053610:intron | 55.0% | |
| !! | GGGACTAGCTTGCAAGGTGA+GGG | - | chr1_2:8086103-8086122 | None:intergenic | 55.0% |
| !! | TGGGACTAGCTTGCAAGGTG+AGG | - | chr1_2:8086104-8086123 | None:intergenic | 55.0% |
| TCGGTGGCCAGAGAAATGAG+AGG | + | chr1_2:8089166-8089185 | Msa0053610:CDS | 55.0% | |
| GTGGCCAGAGAAATGAGAGG+AGG | + | chr1_2:8089169-8089188 | Msa0053610:CDS | 55.0% | |
| GTTTCCCGGTTGAAAGTGGC+TGG | - | chr1_2:8089967-8089986 | None:intergenic | 55.0% | |
| AACACGCGGTCTACGCTATC+CGG | - | chr1_2:8090835-8090854 | None:intergenic | 55.0% | |
| GACCACTGCACTTGACCAGA+AGG | + | chr1_2:8090867-8090886 | Msa0053610:CDS | 55.0% | |
| !! | CGGAGGAATCTCTTTGAGGC+TGG | + | chr1_2:8090931-8090950 | Msa0053610:CDS | 55.0% |
| !! | GTACTGAGGGATTGGTCCCC+CGG | + | chr1_2:8085225-8085244 | Msa0053610:intron | 60.0% |
| !! | GGTCCCCCGGATTAGTTGGT+TGG | + | chr1_2:8085238-8085257 | Msa0053610:intron | 60.0% |
| CCCGAAAGCAGGTGGTCGAA+TGG | - | chr1_2:8085980-8085999 | None:intergenic | 60.0% | |
| !! | CGGGTTGGGACTAGCTTGCA+AGG | - | chr1_2:8086109-8086128 | None:intergenic | 60.0% |
| CGCTATCCGGAGCAGTGTTC+TGG | - | chr1_2:8090822-8090841 | None:intergenic | 60.0% | |
| !! | GGTTGGTTTGGTGGCTGGGG+TGG | - | chr1_2:8088811-8088830 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 8084250 | 8091298 | 8084250 | ID=Msa0053610;Name=Msa0053610 |
| chr1_2 | mRNA | 8084250 | 8091298 | 8084250 | ID=Msa0053610-mRNA-1;Parent=Msa0053610;Name=Msa0053610-mRNA-1;_AED=0.18;_eAED=0.18;_QI=628|1|1|1|0.92|0.85|14|335|392 |
| chr1_2 | exon | 8084250 | 8084816 | 8084250 | ID=Msa0053610-mRNA-1:exon:2854;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8085377 | 8085524 | 8085377 | ID=Msa0053610-mRNA-1:exon:2855;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8085613 | 8085685 | 8085613 | ID=Msa0053610-mRNA-1:exon:2856;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8086717 | 8086754 | 8086717 | ID=Msa0053610-mRNA-1:exon:2857;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8086836 | 8086925 | 8086836 | ID=Msa0053610-mRNA-1:exon:2858;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8087087 | 8087164 | 8087087 | ID=Msa0053610-mRNA-1:exon:2859;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8087337 | 8087444 | 8087337 | ID=Msa0053610-mRNA-1:exon:2860;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8087561 | 8087662 | 8087561 | ID=Msa0053610-mRNA-1:exon:2861;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8087903 | 8087958 | 8087903 | ID=Msa0053610-mRNA-1:exon:2862;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8089116 | 8089250 | 8089116 | ID=Msa0053610-mRNA-1:exon:2863;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8089556 | 8089649 | 8089556 | ID=Msa0053610-mRNA-1:exon:2864;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8089789 | 8089848 | 8089789 | ID=Msa0053610-mRNA-1:exon:2865;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8089929 | 8090008 | 8089929 | ID=Msa0053610-mRNA-1:exon:2866;Parent=Msa0053610-mRNA-1 |
| chr1_2 | exon | 8090786 | 8091298 | 8090786 | ID=Msa0053610-mRNA-1:exon:2867;Parent=Msa0053610-mRNA-1 |
| chr1_2 | five_prime_UTR | 8084250 | 8084816 | 8084250 | ID=Msa0053610-mRNA-1:five_prime_utr;Parent=Msa0053610-mRNA-1 |
| chr1_2 | five_prime_UTR | 8085377 | 8085437 | 8085377 | ID=Msa0053610-mRNA-1:five_prime_utr;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8085438 | 8085524 | 8085438 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8085613 | 8085685 | 8085613 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8086717 | 8086754 | 8086717 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8086836 | 8086925 | 8086836 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8087087 | 8087164 | 8087087 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8087337 | 8087444 | 8087337 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8087561 | 8087662 | 8087561 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8087903 | 8087958 | 8087903 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8089116 | 8089250 | 8089116 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8089556 | 8089649 | 8089556 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8089789 | 8089848 | 8089789 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8089929 | 8090008 | 8089929 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | CDS | 8090786 | 8090963 | 8090786 | ID=Msa0053610-mRNA-1:cds;Parent=Msa0053610-mRNA-1 |
| chr1_2 | three_prime_UTR | 8090964 | 8091298 | 8090964 | ID=Msa0053610-mRNA-1:three_prime_utr;Parent=Msa0053610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
