AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0055430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055430 MtrunA17_Chr1g0148841 97.163 1445 30 1 1 1434 1 1445 0.0 2910
Msa0055430 MtrunA17_Chr1g0148811 80.140 1430 262 3 16 1434 4 1422 0.0 2352
Msa0055430 MtrunA17_Chr3g0138261 70.755 1443 392 10 1 1426 1 1430 0.0 2102
Msa0055430 MtrunA17_Chr2g0332221 66.829 1438 440 8 1 1424 1 1415 0.0 2054
Msa0055430 MtrunA17_Chr2g0332241 66.759 1438 442 8 1 1424 1 1416 0.0 2048
Msa0055430 MtrunA17_Chr4g0003981 67.653 1453 433 9 1 1434 1 1435 0.0 2046
Msa0055430 MtrunA17_Chr2g0332211 66.412 1438 449 8 1 1424 82 1499 0.0 2043
Msa0055430 MtrunA17_Chr7g0262231 64.710 1448 483 8 14 1434 8 1454 0.0 1998
Msa0055430 MtrunA17_Chr7g0262241 65.160 1438 469 9 24 1434 19 1451 0.0 1982
Msa0055430 MtrunA17_Chr4g0003971 66.551 1438 417 8 12 1434 6 1394 0.0 1959
Msa0055430 MtrunA17_Chr7g0261971 64.083 1445 491 8 15 1434 5 1446 0.0 1946
Msa0055430 MtrunA17_Chr7g0261951 64.365 1448 484 8 14 1434 8 1450 0.0 1945
Msa0055430 MtrunA17_Chr7g0261981 62.950 1444 467 9 14 1434 8 1406 0.0 1926
Msa0055430 MtrunA17_Chr7g0262221 62.517 1478 447 12 14 1434 9 1436 0.0 1919
Msa0055430 MtrunA17_Chr4g0004021 68.311 1297 371 9 1 1279 1 1275 0.0 1819
Msa0055430 MtrunA17_Chr4g0004021 22.767 571 379 12 861 1381 166 724 2.22e-31 134
Msa0055430 MtrunA17_Chr7g0262261 61.582 1429 478 6 33 1434 2 1386 0.0 1804
Msa0055430 MtrunA17_Chr7g0262261 56.818 88 35 1 27 111 1424 1511 2.33e-21 102
Msa0055430 MtrunA17_Chr7g0262261 50.000 78 36 1 1350 1424 1535 1612 2.46e-19 95.1
Msa0055430 MtrunA17_Chr7g0262251 59.889 1441 483 10 11 1418 18 1396 0.0 1796
Msa0055430 MtrunA17_Chr7g0265981 59.219 1459 548 12 1 1427 5 1448 0.0 1776
Msa0055430 MtrunA17_Chr7g0265981 24.196 653 376 18 161 767 878 1457 5.08e-35 146
Msa0055430 MtrunA17_Chr1g0171351 57.967 1456 582 10 7 1434 13 1466 0.0 1759
Msa0055430 MtrunA17_Chr7g0265971 57.510 1478 563 12 1 1434 5 1461 0.0 1751
Msa0055430 MtrunA17_Chr1g0198291 57.727 1443 572 11 18 1434 36 1466 0.0 1729
Msa0055430 MtrunA17_Chr4g0062871 57.754 1425 564 8 23 1427 3 1409 0.0 1708
Msa0055430 MtrunA17_Chr2g0331081 57.466 1413 573 5 31 1415 33 1445 0.0 1680
Msa0055430 MtrunA17_Chr2g0331081 24.085 656 430 17 863 1463 176 818 1.75e-39 160
Msa0055430 MtrunA17_Chr8g0340651 55.563 1429 593 7 31 1417 33 1461 0.0 1644
Msa0055430 MtrunA17_Chr7g0265961 55.285 1438 545 8 16 1434 28 1386 0.0 1616
Msa0055430 MtrunA17_Chr0c20g0493841 52.709 1421 618 15 35 1426 26 1421 0.0 1518
Msa0055430 MtrunA17_Chr3g0104621 52.620 1355 599 10 111 1435 1 1342 0.0 1435
Msa0055430 MtrunA17_Chr5g0429871 53.451 1246 542 6 205 1435 17 1239 0.0 1379
Msa0055430 MtrunA17_Chr5g0429871 21.886 562 369 14 164 703 665 1178 3.82e-26 117
Msa0055430 MtrunA17_Chr7g0262321 56.615 1164 419 11 265 1406 2 1101 0.0 1309
Msa0055430 MtrunA17_Chr4g0069211 52.552 1058 441 14 35 1067 26 1047 0.0 1074
Msa0055430 MtrunA17_Chr4g0069211 23.237 624 402 19 861 1431 162 761 3.29e-36 149
Msa0055430 MtrunA17_Chr7g0266001 59.641 669 256 3 109 763 6 674 0.0 835
Msa0055430 MtrunA17_Chr7g0266001 23.124 653 409 18 864 1446 61 690 1.12e-35 146
Msa0055430 MtrunA17_Chr7g0265991 61.156 623 227 2 827 1434 20 642 0.0 820
Msa0055430 MtrunA17_Chr7g0265991 23.839 646 397 19 161 767 54 643 2.68e-34 141
Msa0055430 MtrunA17_Chr7g0215001 61.968 376 121 1 1014 1367 1 376 1.64e-168 510
Msa0055430 MtrunA17_Chr7g0215001 21.120 393 246 12 346 692 1 375 1.96e-14 77.0
Msa0055430 MtrunA17_Chr4g0069221 48.774 367 183 2 1064 1426 1 366 2.77e-125 395
Msa0055430 MtrunA17_Chr6g0472481 73.279 247 54 1 854 1088 1 247 7.80e-120 375
Msa0055430 MtrunA17_Chr6g0472481 25.556 270 151 7 164 416 11 247 2.91e-13 72.0
Msa0055430 MtrunA17_Chr4g0004001 66.667 162 51 2 1265 1424 16 176 3.89e-71 236
Msa0055430 MtrunA17_Chr7g0238421 50.000 260 89 4 874 1133 12 230 6.98e-68 228
Msa0055430 MtrunA17_Chr7g0262331 55.981 209 85 5 35 238 2 208 3.64e-67 225
Msa0055430 MtrunA17_Chr1g0198931 28.155 618 397 17 831 1420 66 664 2.32e-58 215
Msa0055430 MtrunA17_Chr1g0198931 27.972 572 327 23 166 703 107 627 2.18e-37 151
Msa0055430 MtrunA17_Chr2g0316301 28.148 540 363 10 866 1396 73 596 5.86e-57 209
Msa0055430 MtrunA17_Chr2g0316301 24.638 621 368 18 166 754 73 625 3.54e-33 137
Msa0055430 MtrunA17_Chr1g0176441 27.721 588 379 14 833 1392 143 712 5.16e-56 209
Msa0055430 MtrunA17_Chr1g0176441 26.007 546 326 18 166 676 171 673 2.64e-34 142
Msa0055430 MtrunA17_Chr1g0176451 27.936 562 357 15 860 1393 17 558 1.23e-51 192
Msa0055430 MtrunA17_Chr1g0176451 25.373 536 335 14 166 676 23 518 3.19e-36 146
Msa0055430 MtrunA17_Chr1g0208391 27.256 554 370 11 866 1400 93 632 4.92e-51 194
Msa0055430 MtrunA17_Chr1g0208391 27.465 568 333 18 166 706 93 608 7.55e-41 162
Msa0055430 MtrunA17_Chr4g0039261 27.882 642 389 21 827 1426 26 635 2.84e-50 191
Msa0055430 MtrunA17_Chr4g0039261 26.825 630 382 16 166 761 51 635 3.45e-48 184
Msa0055430 MtrunA17_Chr1g0213091 24.013 608 393 12 829 1380 66 660 2.77e-49 189
Msa0055430 MtrunA17_Chr1g0213091 23.038 586 355 14 166 704 122 658 1.44e-31 134
Msa0055430 MtrunA17_Chr8g0390471 79.798 99 20 0 866 964 5 103 3.29e-49 170
Msa0055430 MtrunA17_Chr4g0039251 28.444 559 337 14 865 1386 92 624 4.51e-49 187
Msa0055430 MtrunA17_Chr4g0039251 26.562 576 342 18 166 706 93 622 1.61e-42 167
Msa0055430 MtrunA17_Chr4g0050251 25.045 551 377 11 866 1395 73 608 1.91e-48 185
Msa0055430 MtrunA17_Chr4g0050251 26.400 625 382 18 166 760 73 649 3.34e-45 175
Msa0055430 MtrunA17_Chr4g0050221 28.942 539 345 16 861 1378 26 547 2.63e-48 184
Msa0055430 MtrunA17_Chr4g0050221 24.691 648 379 19 152 755 17 599 8.24e-34 139
Msa0055430 MtrunA17_Chr7g0267971 26.572 636 407 14 785 1392 98 701 3.37e-48 185
Msa0055430 MtrunA17_Chr7g0267971 29.670 273 156 8 166 437 160 397 1.11e-28 124
Msa0055430 MtrunA17_Chr5g0408061 25.874 572 368 11 836 1381 44 585 4.77e-48 183
Msa0055430 MtrunA17_Chr5g0408061 26.689 592 331 24 134 685 35 563 1.28e-37 151
Msa0055430 MtrunA17_Chr8g0359931 27.641 568 378 15 836 1389 34 582 3.09e-47 181
Msa0055430 MtrunA17_Chr8g0359931 25.735 544 322 20 166 685 66 551 1.35e-33 139
Msa0055430 MtrunA17_Chr1g0200651 26.287 544 365 9 856 1380 81 607 1.02e-46 179
Msa0055430 MtrunA17_Chr1g0200651 26.852 540 316 20 166 676 90 579 4.23e-35 144
Msa0055430 MtrunA17_Chr4g0050261 24.407 590 373 15 866 1395 73 649 3.83e-46 179
Msa0055430 MtrunA17_Chr4g0050261 25.564 665 378 22 166 760 73 690 3.30e-40 160
Msa0055430 MtrunA17_Chr4g0050291 25.556 630 383 17 166 760 50 628 1.26e-45 176
Msa0055430 MtrunA17_Chr4g0050291 25.000 604 396 17 858 1423 42 626 4.67e-44 171
Msa0055430 MtrunA17_Chr6g0477811 28.807 486 284 14 165 632 65 506 1.69e-45 176
Msa0055430 MtrunA17_Chr6g0477811 25.227 551 361 12 865 1385 65 594 8.62e-43 168
Msa0055430 MtrunA17_Chr5g0446901 29.020 510 309 16 833 1303 61 556 2.64e-45 174
Msa0055430 MtrunA17_Chr5g0446901 29.268 287 164 7 155 437 98 349 5.45e-29 124
Msa0055430 MtrunA17_Chr1g0202431 25.621 523 352 9 866 1379 50 544 3.91e-45 174
Msa0055430 MtrunA17_Chr1g0202431 22.273 651 390 18 145 759 31 601 5.10e-34 140
Msa0055430 MtrunA17_Chr3g0102731 29.622 503 304 15 836 1303 54 541 2.07e-44 171
Msa0055430 MtrunA17_Chr3g0102731 30.657 274 153 7 165 437 97 334 4.86e-30 127
Msa0055430 MtrunA17_Chr5g0429861 44.253 174 89 2 41 206 36 209 2.98e-42 156
Msa0055430 MtrunA17_Chr1g0199471 34.470 264 153 4 865 1108 516 779 3.69e-42 169
Msa0055430 MtrunA17_Chr1g0199471 33.704 270 141 7 165 431 516 750 1.25e-31 135
Msa0055430 MtrunA17_Chr8g0384391 22.127 583 404 13 833 1386 25 586 2.72e-41 162
Msa0055430 MtrunA17_Chr8g0384391 21.947 647 389 14 165 761 55 635 1.79e-35 145
Msa0055430 MtrunA17_Chr2g0318061 28.429 401 244 12 837 1216 1 379 5.25e-41 156
Msa0055430 MtrunA17_Chr2g0318061 32.601 273 147 8 166 437 31 267 5.41e-33 132
Msa0055430 MtrunA17_Chr4g0065231 25.140 537 377 9 850 1378 59 578 1.95e-40 160
Msa0055430 MtrunA17_Chr4g0065231 22.204 617 396 14 163 754 72 629 1.82e-35 145
Msa0055430 MtrunA17_Chr1g0180971 33.846 260 166 3 863 1122 410 663 2.09e-40 161
Msa0055430 MtrunA17_Chr1g0180971 33.700 273 145 8 165 435 412 650 7.70e-30 128
Msa0055430 MtrunA17_Chr7g0264441 33.878 245 156 3 865 1109 278 516 2.29e-40 162
Msa0055430 MtrunA17_Chr7g0264441 34.307 274 142 8 165 435 278 516 5.28e-31 132
Msa0055430 MtrunA17_Chr5g0411621 35.587 281 164 6 835 1109 17 286 5.39e-40 160
Msa0055430 MtrunA17_Chr5g0411621 29.391 279 163 4 166 444 51 295 3.87e-28 122
Msa0055430 MtrunA17_Chr3g0130331 24.680 547 370 16 865 1386 57 586 5.57e-40 159
Msa0055430 MtrunA17_Chr3g0130331 20.795 654 386 15 165 761 57 635 9.38e-34 139
Msa0055430 MtrunA17_Chr8g0393191 31.802 283 185 4 839 1121 43 317 1.58e-37 153
Msa0055430 MtrunA17_Chr8g0393191 25.566 309 183 6 161 457 64 337 1.21e-23 108
Msa0055430 MtrunA17_Chr8g0393191 23.111 225 167 3 1157 1381 518 736 2.83e-13 75.1
Msa0055430 MtrunA17_Chr4g0028621 35.102 245 153 2 865 1109 506 744 1.63e-37 154
Msa0055430 MtrunA17_Chr4g0028621 33.574 277 146 7 162 435 503 744 5.52e-26 116
Msa0055430 MtrunA17_Chr4g0026731 24.525 526 349 13 908 1395 22 537 1.43e-36 147
Msa0055430 MtrunA17_Chr4g0026731 24.671 608 361 20 199 755 12 573 5.48e-32 134
Msa0055430 MtrunA17_Chr7g0263351 31.496 254 158 3 836 1074 82 334 1.27e-34 143
Msa0055430 MtrunA17_Chr7g0263351 23.966 580 365 13 157 704 118 653 1.18e-31 134
Msa0055430 MtrunA17_Chr4g0050201 26.964 471 310 14 908 1359 5 460 6.99e-34 138
Msa0055430 MtrunA17_Chr4g0050201 29.412 238 129 7 205 438 1 203 9.84e-22 101
Msa0055430 MtrunA17_Chr4g0039231 25.205 611 350 20 906 1426 1 594 1.47e-33 139
Msa0055430 MtrunA17_Chr4g0039231 32.627 236 120 7 208 440 2 201 6.62e-28 121
Msa0055430 MtrunA17_Chr2g0327241 22.465 641 410 22 849 1439 111 714 4.78e-28 122
Msa0055430 MtrunA17_Chr2g0327241 22.037 481 316 11 166 632 126 561 3.27e-22 103
Msa0055430 MtrunA17_Chr8g0390461 45.918 98 48 1 684 776 2 99 2.51e-24 101
Msa0055430 MtrunA17_Chr8g0390481 85.714 56 7 1 996 1050 7 62 2.53e-24 97.8
Msa0055430 MtrunA17_Chr7g0266011 50.000 92 39 2 27 111 38 129 1.28e-21 92.4
Msa0055430 MtrunA17_Chr3g0093331 32.821 195 126 5 885 1076 17 209 1.72e-21 95.9
Msa0055430 MtrunA17_Chr3g0093331 25.600 250 153 3 187 435 19 236 4.11e-19 89.0
Msa0055430 MtrunA17_Chr8g0390451 62.500 64 24 0 241 304 23 86 3.53e-20 86.7
Msa0055430 MtrunA17_Chr7g0238411 41.558 77 45 0 599 675 27 103 8.21e-16 75.1
Msa0055430 MtrunA17_Chr4g0047831 39.024 82 50 0 983 1064 1 82 2.49e-12 64.7
Msa0055430 MtrunA17_Chr3g0132711 29.474 190 111 7 867 1048 210 384 1.71e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055430 AT1G15520.1 65.669 1436 447 9 10 1429 11 1416 0.0 1996
Msa0055430 AT1G15520.2 66.797 1274 378 8 10 1268 11 1254 0.0 1779
Msa0055430 AT1G15520.2 22.359 568 378 14 861 1378 164 718 2.43e-32 138
Msa0055430 AT1G66950.1 57.488 1449 567 11 11 1434 28 1452 0.0 1754
Msa0055430 AT2G36380.1 57.862 1431 557 9 27 1434 44 1451 0.0 1742
Msa0055430 AT2G26910.1 57.781 1433 567 6 23 1434 3 1418 0.0 1717
Msa0055430 AT3G16340.1 56.405 1452 577 7 1 1434 1 1414 0.0 1695
Msa0055430 AT1G15210.1 56.856 1444 560 9 3 1413 6 1419 0.0 1688
Msa0055430 AT1G59870.1 56.962 1422 574 8 24 1413 31 1446 0.0 1686
Msa0055430 AT3G16340.2 56.129 1452 576 8 1 1434 1 1409 0.0 1680
Msa0055430 AT3G30842.1 55.177 1410 593 8 40 1434 31 1416 0.0 1620
Msa0055430 AT2G29940.1 53.539 1427 602 8 35 1434 32 1424 0.0 1594
Msa0055430 AT3G53480.1 51.273 1414 641 14 35 1426 53 1440 0.0 1484
Msa0055430 AT2G37280.1 50.636 1414 647 13 35 1426 19 1403 0.0 1473
Msa0055430 AT2G37280.3 49.619 1443 647 14 35 1426 19 1432 0.0 1457
Msa0055430 AT2G37280.2 51.349 1334 601 12 35 1349 19 1323 0.0 1408
Msa0055430 AT2G37280.2 25.856 584 353 19 854 1378 140 702 7.64e-40 162
Msa0055430 AT2G37280.2 23.370 552 331 14 161 669 835 1337 1.96e-25 115
Msa0055430 AT4G15230.3 48.694 1417 663 12 29 1426 19 1390 0.0 1397
Msa0055430 AT4G15230.1 48.694 1417 663 12 29 1426 19 1390 0.0 1397
Msa0055430 AT4G15215.11 48.551 1415 666 11 29 1426 18 1387 0.0 1396
Msa0055430 AT4G15215.9 48.551 1415 666 11 29 1426 15 1384 0.0 1395
Msa0055430 AT4G15215.4 48.551 1415 666 11 29 1426 15 1384 0.0 1395
Msa0055430 AT4G15215.5 48.551 1415 666 11 29 1426 15 1384 0.0 1395
Msa0055430 AT4G15215.3 48.551 1415 666 11 29 1426 15 1384 0.0 1395
Msa0055430 AT4G15215.2 48.551 1415 666 11 29 1426 15 1384 0.0 1395
Msa0055430 AT4G15233.1 47.786 1423 669 11 25 1426 13 1382 0.0 1379
Msa0055430 AT4G15233.1 22.642 689 455 19 863 1492 152 821 5.08e-33 140
Msa0055430 AT4G15215.8 48.198 1415 664 12 29 1426 15 1377 0.0 1378
Msa0055430 AT4G15215.10 48.198 1415 664 12 29 1426 15 1377 0.0 1378
Msa0055430 AT4G15215.6 48.198 1415 664 12 29 1426 15 1377 0.0 1378
Msa0055430 AT4G15215.7 48.198 1415 664 12 29 1426 15 1377 0.0 1378
Msa0055430 AT4G15215.1 48.198 1415 664 12 29 1426 18 1380 0.0 1377
Msa0055430 AT4G15236.1 47.756 1426 665 14 22 1426 14 1380 0.0 1370
Msa0055430 AT4G15236.1 23.478 690 452 19 861 1492 148 819 2.93e-36 150
Msa0055430 AT2G37280.4 51.544 1263 573 8 178 1426 8 1245 0.0 1359
Msa0055430 AT2G37280.4 24.286 560 352 15 161 697 677 1187 1.25e-31 135
Msa0055430 AT4G15233.3 48.324 1372 642 9 70 1426 1 1320 0.0 1355
Msa0055430 AT4G15233.3 22.899 690 452 21 863 1492 90 759 6.15e-33 140
Msa0055430 AT4G15233.6 48.324 1372 642 9 70 1426 1 1320 0.0 1355
Msa0055430 AT4G15233.6 22.899 690 452 21 863 1492 90 759 6.15e-33 140
Msa0055430 AT4G15233.8 47.154 1423 669 12 25 1426 13 1373 0.0 1353
Msa0055430 AT4G15233.8 22.206 689 449 20 863 1492 152 812 1.79e-29 129
Msa0055430 AT4G15230.4 49.077 1355 630 10 87 1426 2 1311 0.0 1351
Msa0055430 AT4G15233.7 47.084 1423 661 12 25 1426 13 1364 0.0 1345
Msa0055430 AT4G15233.7 23.249 671 455 18 863 1492 152 803 2.76e-34 144
Msa0055430 AT4G15233.2 47.530 1397 640 10 25 1380 13 1357 0.0 1338
Msa0055430 AT4G15233.2 22.642 689 455 19 863 1492 152 821 3.54e-33 140
Msa0055430 AT4G15230.2 49.140 1337 619 11 29 1349 19 1310 0.0 1327
Msa0055430 AT4G15230.2 23.468 571 367 18 861 1378 151 704 9.28e-35 145
Msa0055430 AT4G15233.5 47.167 706 336 7 70 763 1 681 0.0 660
Msa0055430 AT4G15233.5 53.464 563 259 1 867 1426 677 1239 0.0 645
Msa0055430 AT4G15233.5 24.685 555 342 15 175 704 685 1188 5.43e-38 156
Msa0055430 AT4G15233.5 23.775 551 368 14 863 1378 90 623 4.96e-34 143
Msa0055430 AT4G15233.4 47.167 706 336 7 70 763 1 681 0.0 660
Msa0055430 AT4G15233.4 53.464 563 259 1 867 1426 677 1239 0.0 645
Msa0055430 AT4G15233.4 24.685 555 342 15 175 704 685 1188 5.43e-38 156
Msa0055430 AT4G15233.4 23.775 551 368 14 863 1378 90 623 4.96e-34 143
Msa0055430 AT2G01320.8 26.799 556 354 11 866 1391 90 622 9.44e-56 207
Msa0055430 AT2G01320.8 28.988 583 319 22 159 706 83 605 4.17e-43 169
Msa0055430 AT2G01320.5 26.799 556 354 11 866 1391 90 622 9.44e-56 207
Msa0055430 AT2G01320.5 28.988 583 319 22 159 706 83 605 4.17e-43 169
Msa0055430 AT2G01320.3 27.188 537 344 10 866 1378 90 603 1.53e-55 207
Msa0055430 AT2G01320.3 28.988 583 319 22 159 706 83 605 1.65e-42 168
Msa0055430 AT2G01320.2 27.188 537 344 10 866 1378 90 603 1.57e-55 207
Msa0055430 AT2G01320.2 28.988 583 319 22 159 706 83 605 1.82e-42 168
Msa0055430 AT2G01320.1 27.188 537 344 10 866 1378 90 603 1.58e-55 207
Msa0055430 AT2G01320.1 28.988 583 319 22 159 706 83 605 1.69e-42 168
Msa0055430 AT2G01320.4 27.188 537 344 10 866 1378 90 603 1.58e-55 207
Msa0055430 AT2G01320.4 28.988 583 319 22 159 706 83 605 1.69e-42 168
Msa0055430 AT4G27420.1 27.674 589 386 16 835 1403 33 601 1.51e-54 203
Msa0055430 AT4G27420.1 27.698 556 323 19 166 693 66 570 2.10e-36 148
Msa0055430 AT5G06530.2 27.152 604 389 14 833 1402 151 737 1.87e-54 205
Msa0055430 AT5G06530.2 25.768 586 339 23 165 702 178 715 7.51e-34 141
Msa0055430 AT5G06530.1 27.152 604 389 14 833 1402 151 737 1.87e-54 205
Msa0055430 AT5G06530.1 25.768 586 339 23 165 702 178 715 7.51e-34 141
Msa0055430 AT3G25620.2 28.986 621 386 19 820 1407 47 645 1.16e-53 201
Msa0055430 AT3G25620.2 28.415 549 307 20 160 674 93 589 1.56e-40 161
Msa0055430 AT3G55100.1 23.549 586 401 13 832 1391 15 579 3.89e-53 199
Msa0055430 AT3G55100.1 23.397 577 357 14 159 704 44 566 2.22e-31 132
Msa0055430 AT3G55100.2 23.549 586 401 13 832 1391 15 579 3.89e-53 199
Msa0055430 AT3G55100.2 23.397 577 357 14 159 704 44 566 2.22e-31 132
Msa0055430 AT3G55090.1 23.520 659 429 14 795 1407 31 660 2.29e-52 198
Msa0055430 AT3G55090.1 23.395 701 384 21 151 759 88 727 2.49e-31 133
Msa0055430 AT1G53270.1 24.510 612 426 13 821 1428 6 585 2.62e-52 195
Msa0055430 AT1G53270.1 23.639 588 334 13 159 711 43 550 2.96e-29 125
Msa0055430 AT3G55130.1 23.810 588 401 13 836 1391 70 642 4.34e-51 194
Msa0055430 AT3G55130.1 24.739 574 354 17 166 704 99 629 1.21e-32 137
Msa0055430 AT3G21090.1 26.656 604 378 14 865 1423 44 627 6.82e-51 193
Msa0055430 AT3G21090.1 25.487 667 412 15 132 760 9 628 1.41e-47 183
Msa0055430 AT5G06530.3 27.322 549 356 11 833 1353 151 684 7.20e-51 193
Msa0055430 AT5G06530.3 25.979 562 324 22 165 684 178 689 1.79e-33 139
Msa0055430 AT1G51500.1 28.029 553 349 14 865 1386 43 577 8.10e-49 187
Msa0055430 AT1G51500.1 25.714 630 391 16 165 760 43 629 1.13e-42 168
Msa0055430 AT3G55110.1 24.310 580 401 15 836 1391 60 625 1.14e-48 186
Msa0055430 AT3G55110.1 24.077 569 355 17 166 704 91 612 7.44e-33 137
Msa0055430 AT5G13580.1 24.493 592 399 10 836 1391 65 644 1.30e-48 187
Msa0055430 AT5G13580.1 24.156 563 364 12 166 704 108 631 1.67e-26 118
Msa0055430 AT2G01320.7 28.947 456 277 10 866 1297 90 522 2.57e-48 182
Msa0055430 AT2G01320.7 30.200 500 265 20 159 634 83 522 3.03e-39 155
Msa0055430 AT2G01320.6 28.947 456 277 10 866 1297 90 522 2.57e-48 182
Msa0055430 AT2G01320.6 30.200 500 265 20 159 634 83 522 3.03e-39 155
Msa0055430 AT1G31770.1 25.470 585 382 13 823 1381 37 593 3.40e-47 181
Msa0055430 AT1G31770.1 27.103 535 315 18 166 676 81 564 1.69e-38 154
Msa0055430 AT2G39350.1 23.344 604 383 12 836 1380 64 646 1.67e-46 180
Msa0055430 AT2G39350.1 24.174 575 361 12 166 704 109 644 1.14e-31 134
Msa0055430 AT1G71960.1 27.518 556 368 14 843 1381 60 597 1.76e-46 179
Msa0055430 AT1G71960.1 24.324 555 341 19 166 694 83 584 1.63e-31 133
Msa0055430 AT3G53510.1 26.813 593 373 16 866 1430 126 685 2.57e-46 180
Msa0055430 AT3G53510.1 23.675 566 357 13 166 704 126 643 5.12e-28 122
Msa0055430 AT1G17840.1 26.909 550 353 15 865 1385 68 597 1.56e-45 177
Msa0055430 AT1G17840.1 27.061 558 332 16 165 694 68 578 7.82e-45 175
Msa0055430 AT5G52860.1 26.163 516 342 12 866 1379 44 522 2.90e-45 174
Msa0055430 AT5G52860.1 22.063 630 378 16 158 759 36 580 2.32e-29 125
Msa0055430 AT5G06530.4 26.854 499 327 10 883 1353 1 489 3.39e-45 172
Msa0055430 AT5G06530.4 26.015 542 313 21 183 684 1 494 4.05e-31 130
Msa0055430 AT1G53390.1 29.159 511 303 16 865 1333 522 1015 7.12e-45 178
Msa0055430 AT1G53390.1 32.847 274 146 7 165 435 522 760 4.39e-29 127
Msa0055430 AT3G13220.1 26.280 586 371 14 836 1381 62 626 1.59e-44 174
Msa0055430 AT3G13220.1 28.743 334 198 9 155 487 95 389 1.34e-30 130
Msa0055430 AT2G13610.1 24.685 555 363 14 865 1388 61 591 5.74e-44 171
Msa0055430 AT2G13610.1 22.673 591 336 13 165 704 61 581 3.50e-34 141
Msa0055430 AT3G25620.1 31.415 417 241 14 820 1204 47 450 7.11e-44 167
Msa0055430 AT3G25620.1 36.882 263 129 8 160 421 93 319 1.02e-38 152
Msa0055430 AT1G51460.1 27.122 542 346 11 865 1372 29 555 1.01e-41 165
Msa0055430 AT1G51460.1 27.230 639 362 23 166 751 30 618 1.12e-36 149
Msa0055430 AT4G25750.1 25.239 523 340 17 866 1379 30 510 6.56e-41 160
Msa0055430 AT4G25750.1 23.370 629 377 17 156 759 20 568 5.38e-31 130
Msa0055430 AT2G37010.2 26.786 560 333 16 865 1377 499 1028 1.23e-40 164
Msa0055430 AT2G37010.2 32.841 271 146 6 162 430 496 732 7.65e-32 136
Msa0055430 AT2G37010.1 26.786 560 333 16 865 1377 499 1028 1.23e-40 164
Msa0055430 AT2G37010.1 32.841 271 146 6 162 430 496 732 7.65e-32 136
Msa0055430 AT2G37360.1 32.184 261 164 3 836 1088 95 350 1.73e-36 149
Msa0055430 AT2G37360.1 25.261 574 347 14 166 704 133 659 1.08e-35 147
Msa0055430 AT2G37360.1 25.325 154 115 0 1235 1388 516 669 2.52e-12 72.4
Msa0055430 AT5G19410.1 25.573 524 350 14 866 1378 66 560 3.56e-36 147
Msa0055430 AT5G19410.1 21.452 620 381 15 166 754 66 610 3.95e-31 131
Msa0055430 AT5G19410.2 25.573 524 350 14 866 1378 75 569 3.97e-36 147
Msa0055430 AT5G19410.2 21.452 620 381 15 166 754 75 619 3.70e-31 132
Msa0055430 AT5G60740.1 27.536 483 265 11 865 1286 514 972 1.05e-35 148
Msa0055430 AT5G60740.1 33.574 277 146 7 162 435 511 752 7.89e-26 116
Msa0055430 AT2G28070.2 22.222 558 384 17 849 1378 118 653 3.93e-25 113
Msa0055430 AT2G28070.2 22.982 570 363 17 166 706 133 655 1.04e-24 112
Msa0055430 AT2G28070.1 22.222 558 384 17 849 1378 118 653 3.93e-25 113
Msa0055430 AT2G28070.1 22.982 570 363 17 166 706 133 655 1.04e-24 112
Msa0055430 AT3G47730.1 30.851 188 113 7 867 1049 547 722 1.91e-11 69.7

Find 305 sgRNAs with CRISPR-Local

Find 625 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTTCTGTTATATTTAT+TGG 0.068557 1_2:+10404376 Msa0055430:CDS
CCAATGTTTCATTGGAATTA+TGG 0.078670 1_2:-10401674 None:intergenic
TCTTGTTTGGAATCATATTT+TGG 0.147419 1_2:+10404215 Msa0055430:CDS
TCAGCTTCTACTTATGAAAT+TGG 0.167447 1_2:+10403614 Msa0055430:intron
ACAGCTTCTATGATAGTTAT+TGG 0.206008 1_2:-10400788 None:intergenic
TCAAATAATTCATAAGTTTC+TGG 0.208214 1_2:-10399941 None:intergenic
GTCTGATTGAGCTGATTATT+TGG 0.213893 1_2:-10399865 None:intergenic
AAAACTTGCTAAAGATTTAA+AGG 0.218302 1_2:+10398131 Msa0055430:CDS
CAATGAAACATTGGGAGTTT+TGG 0.221856 1_2:+10401683 Msa0055430:CDS
TTCTTGTACTACACCTTCTA+TGG 0.227384 1_2:+10404992 Msa0055430:CDS
GGAAAGATCAATGGCAATAT+TGG 0.228687 1_2:+10400200 Msa0055430:CDS
TGGAAAGACCACTTTGCTTT+TGG 0.235196 1_2:+10398098 Msa0055430:CDS
TTCATTGCTCTCCATTGTTT+TGG 0.244608 1_2:-10396706 None:intergenic
CTTCTTTGTTAATGTGTTAG+AGG 0.244932 1_2:+10397775 Msa0055430:CDS
GTGCAGTTCCATTCAGAATA+TGG 0.247522 1_2:-10399895 None:intergenic
ATTTGCATTACTTGTAGTTT+TGG 0.249605 1_2:+10401082 Msa0055430:CDS
AGGATATGTAATGGTTTCTT+TGG 0.252927 1_2:-10397910 None:intergenic
ACGATGAAGAAGCTCTTAAA+TGG 0.258282 1_2:+10396820 Msa0055430:CDS
GTGATGAAACTTCAGAAATC+TGG 0.263383 1_2:+10398779 Msa0055430:intron
TTATAACCATCTTTGATCTT+AGG 0.264625 1_2:-10403798 None:intergenic
CAATGTTTCATTGGAATTAT+GGG 0.272046 1_2:-10401673 None:intergenic
CAAGGGGTTGGACACAATTA+TGG 0.274301 1_2:+10398932 Msa0055430:CDS
TTGTAGAATGACATTACTTT+TGG 0.274694 1_2:+10398062 Msa0055430:intron
TTATGAATCTTTGTTATATT+CGG 0.281135 1_2:+10402700 Msa0055430:CDS
GGACAGCATCAAAATTCTTT+TGG 0.288670 1_2:+10404945 Msa0055430:CDS
GGAAACAGCATTTATCATAT+TGG 0.295326 1_2:+10404140 Msa0055430:CDS
ATATTTATTGGAGTACAAAA+TGG 0.296470 1_2:+10404388 Msa0055430:CDS
AATTATCCTTTGTAGGAATC+TGG 0.298988 1_2:+10406904 Msa0055430:intron
ACACTAATAGCTTTCTTGTT+TGG 0.299951 1_2:+10404202 Msa0055430:CDS
GGAATGATAAGAGGTATTTC+AGG 0.300517 1_2:+10399445 Msa0055430:CDS
AGATGCTGGTTGGACCTATA+AGG 0.306136 1_2:+10399792 Msa0055430:CDS
ATAGCTGTGAATGAATTTCT+TGG 0.311083 1_2:+10401528 Msa0055430:CDS
TCCCACAAGCTTATTGGTAT+TGG 0.312596 1_2:+10401727 Msa0055430:CDS
CCTCCTCATTCTATGCAATA+TGG 0.314957 1_2:+10405065 Msa0055430:CDS
TTGGTTCAGACCCTGGTATA+TGG 0.315998 1_2:+10404890 Msa0055430:CDS
GTTCTCTCAACTGCTATTAC+AGG 0.318883 1_2:-10404424 None:intergenic
CAAAACTCCCAATGTTTCAT+TGG 0.319258 1_2:-10401682 None:intergenic
AGATGGCTTCTTCACTATTT+CGG 0.321000 1_2:+10401009 Msa0055430:intron
CTAGTAGCTTGATCAACTTC+AGG 0.321415 1_2:-10402740 None:intergenic
CACAATGTAAAGCTTGCTTA+TGG 0.323844 1_2:+10404119 Msa0055430:CDS
ATCTTCTCTTCTATCCTTCA+TGG 0.330250 1_2:+10400732 Msa0055430:CDS
GATGGAAACATCACAATATC+TGG 0.330692 1_2:+10402596 Msa0055430:CDS
TATGGTGGAAGTGGTTCTAT+TGG 0.330755 1_2:+10405709 Msa0055430:CDS
TCCATGAACAATACCCTTAT+AGG 0.333529 1_2:-10399806 None:intergenic
TTCTTCACTATTTCGGTTGA+TGG 0.338203 1_2:+10401016 Msa0055430:CDS
CAAAAGCAGTGAGATATAAA+AGG 0.339819 1_2:+10396546 Msa0055430:five_prime_UTR
AGAGACTTCCTACATATCTA+AGG 0.342919 1_2:+10396853 Msa0055430:CDS
ATCAAACTCATACTTCTTGT+AGG 0.343089 1_2:-10400081 None:intergenic
AATGGTTTCTGTGGGGTTAT+TGG 0.345415 1_2:+10401475 Msa0055430:CDS
TGGAGTACTGACTGCTTTGA+TGG 0.353331 1_2:+10402505 Msa0055430:CDS
GGAAATATGTGCTGACATTA+TGG 0.357051 1_2:+10399414 Msa0055430:CDS
CATATCCTTCAAAATGTTAG+TGG 0.360493 1_2:+10397925 Msa0055430:CDS
CCTGTTGCATGGACATTGTA+TGG 0.361996 1_2:+10405738 Msa0055430:CDS
AAAGTTCTTGTTGAAACTTA+AGG 0.364461 1_2:+10397001 Msa0055430:CDS
CTTATTTCTCACCTTCATAT+AGG 0.364774 1_2:-10399141 None:intergenic
ATCCATTAGAGTAGTCTTTC+CGG 0.365222 1_2:-10402540 None:intergenic
ACCTATAAGGGTATTGTTCA+TGG 0.366056 1_2:+10399805 Msa0055430:CDS
GAGGAGGTATACTTAATTCC+TGG 0.366497 1_2:-10404045 None:intergenic
CGTTAGTCTCTTGCGTTGTT+CGG 0.366818 1_2:-10403318 None:intergenic
ATATAAGCTGATGTTCTTTG+TGG 0.366970 1_2:-10398842 None:intergenic
CCATCGAATCAAAGCCAAAA+AGG 0.367862 1_2:+10407011 Msa0055430:CDS
TCATTAAGAGAAGCACTTGT+TGG 0.370696 1_2:+10403269 Msa0055430:CDS
CAGCTTCTACTTATGAAATT+GGG 0.372582 1_2:+10403615 Msa0055430:intron
CTTCTAATCCTTAGATATGT+AGG 0.379632 1_2:-10396861 None:intergenic
GTTAACACCGTATTTCTTTG+TGG 0.379915 1_2:-10400362 None:intergenic
TGAGCGCAATGGCGGCCTAA+TGG 0.384839 1_2:-10403660 None:intergenic
TCATTTGATTCATTACTTTG+AGG 0.388792 1_2:+10403680 Msa0055430:CDS
TGTAATGGTTTCTTTGGACT+TGG 0.389403 1_2:-10397904 None:intergenic
CAAATATATTCTGGTCCATT+AGG 0.391380 1_2:+10403645 Msa0055430:CDS
ATGAATTTCTTGGACATAGT+TGG 0.393541 1_2:+10401538 Msa0055430:CDS
AAAACATTTGCTCGCATATC+GGG 0.394003 1_2:+10402635 Msa0055430:CDS
GAAAGATCAATGGCAATATT+GGG 0.396408 1_2:+10400201 Msa0055430:CDS
GAGCAAGTAGTTCTAACATA+TGG 0.398935 1_2:+10396754 Msa0055430:CDS
GCCATCACTTACTATGCTAT+TGG 0.399697 1_2:+10400821 Msa0055430:CDS
AATGACAGAAAATACCAATA+TGG 0.404844 1_2:+10405691 Msa0055430:intron
TAGTCATGAATTTACCTTTG+AGG 0.405075 1_2:-10397958 None:intergenic
TTTCGGTTGATGGCAGCATT+AGG 0.405738 1_2:+10401026 Msa0055430:CDS
ACTTCCAACATCCATGTTGC+AGG 0.406371 1_2:-10403822 None:intergenic
GATTCATAAACGGTGACATT+AGG 0.407320 1_2:-10402686 None:intergenic
TAGAACCACTTCCACCATAT+TGG 0.408476 1_2:-10405705 None:intergenic
ATGGTGGAAGTGGTTCTATT+GGG 0.409449 1_2:+10405710 Msa0055430:CDS
AATTCATAAGTTTCTGGTGC+TGG 0.409523 1_2:-10399935 None:intergenic
TGGTCGTCACCGTTGATGTA+TGG 0.410315 1_2:+10401495 Msa0055430:CDS
ACTTCTTGCCTTAGAAAACT+TGG 0.412731 1_2:-10400851 None:intergenic
TTAACAGTAACAAAACTATA+AGG 0.413437 1_2:-10400238 None:intergenic
GATGTTTATTGAGGAAGTTA+TGG 0.419820 1_2:+10403229 Msa0055430:intron
CATCAGAGGACGTGCACAAA+TGG 0.420294 1_2:+10401457 Msa0055430:intron
CTATCATAGAAGCTGTCATA+TGG 0.423277 1_2:+10400795 Msa0055430:CDS
GTTGGATTGCCAGGCGAGAC+TGG 0.424686 1_2:+10403287 Msa0055430:CDS
CTTCCTCATATGCTAGGAAT+AGG 0.425742 1_2:-10406055 None:intergenic
GTGAGGGATAGAGGTTGAAA+AGG 0.430789 1_2:-10402213 None:intergenic
GCTTGGATTAACTGAGAGAA+AGG 0.431326 1_2:+10396935 Msa0055430:CDS
AAAACTGGTGGATATATTGA+TGG 0.431973 1_2:+10402578 Msa0055430:CDS
GAAGCACTTGTTGGATTGCC+AGG 0.432435 1_2:+10403278 Msa0055430:CDS
GAATCCATCGATAATATTCA+TGG 0.433230 1_2:+10403361 Msa0055430:CDS
ATCAATGGCGCCTTTAGGCC+TGG 0.434078 1_2:+10402485 Msa0055430:CDS
CATGGTCATCATACCATAGA+AGG 0.435875 1_2:-10405005 None:intergenic
TTTACCTGTGCTGCTGCATA+AGG 0.436917 1_2:-10404490 None:intergenic
TTCATATAGGCATCAACGTC+AGG 0.441768 1_2:-10399128 None:intergenic
CCATACAATGTCCATGCAAC+AGG 0.444268 1_2:-10405738 None:intergenic
GGAGGTGAGCAAATATATTC+TGG 0.447378 1_2:+10403636 Msa0055430:CDS
ATAGAATGAGGAGGACAGTA+TGG 0.448512 1_2:-10405056 None:intergenic
TCTCTTTGCTTGTAAAAGAC+AGG 0.453336 1_2:-10400710 None:intergenic
TATCCTCATTATCAACTTAG+TGG 0.454647 1_2:+10407040 Msa0055430:CDS
TCTTCTCTTCTATCCTTCAT+GGG 0.454963 1_2:+10400733 Msa0055430:CDS
GGATTGGTGACTTCTCAATA+TGG 0.455023 1_2:+10405759 Msa0055430:CDS
GTTATAGTTGCAAGCACTGT+TGG 0.457473 1_2:+10401056 Msa0055430:CDS
TCATCAAAAGTGAGGGATAG+AGG 0.459332 1_2:-10402222 None:intergenic
TTCTACAGAGAAAGAGCTGC+TGG 0.461177 1_2:+10404451 Msa0055430:CDS
CAAGCTTATTGGTATTGGAT+TGG 0.466131 1_2:+10401732 Msa0055430:CDS
TCCAATACCAATAAGCTTGT+GGG 0.468067 1_2:-10401728 None:intergenic
GGACGAGATATCGACTGGTT+TGG 0.469290 1_2:+10399826 Msa0055430:CDS
TCTTGGACATAGTTGGAGAA+AGG 0.469569 1_2:+10401545 Msa0055430:CDS
CCATAATTCCAATGAAACAT+TGG 0.470292 1_2:+10401674 Msa0055430:CDS
TGGTTCAGACCCTGGTATAT+GGG 0.474549 1_2:+10404891 Msa0055430:CDS
GGCAGCAGCACTAGAAGGAC+AGG 0.474820 1_2:+10399246 Msa0055430:intron
ACAAAGAAGTTGAGCAATGA+AGG 0.476855 1_2:-10397761 None:intergenic
TTTGGAACATCGGCTTGAAA+AGG 0.477108 1_2:+10404233 Msa0055430:CDS
TGATGAAACTTCAGAAATCT+GGG 0.478826 1_2:+10398780 Msa0055430:intron
TATAGAGCTACCCCACATCT+TGG 0.480698 1_2:+10404871 Msa0055430:CDS
TAGGCATCAACGTCAGGATC+TGG 0.480774 1_2:-10399122 None:intergenic
ATGGCAGCAACATGTGGGTT+GGG 0.480789 1_2:-10405037 None:intergenic
ATTCTAGGTTGTAATGTCCT+TGG 0.482930 1_2:+10406011 Msa0055430:intron
CATAATTCCAATGAAACATT+GGG 0.483952 1_2:+10401675 Msa0055430:CDS
ATTGGGTTTGTCCTGTTGCA+TGG 0.484056 1_2:+10405727 Msa0055430:CDS
CAATCAATCCATATTCTGAA+TGG 0.486745 1_2:+10399887 Msa0055430:CDS
CTTCCTATTCCTAGCATATG+AGG 0.487969 1_2:+10406052 Msa0055430:CDS
TTCATGGATGAGCCAACCTC+TGG 0.488564 1_2:+10403377 Msa0055430:CDS
GCATCAAATATGTCAATACT+TGG 0.488710 1_2:-10403488 None:intergenic
AAGGATAAAGCTAGCATAAG+TGG 0.488813 1_2:+10402171 Msa0055430:CDS
GACGATCCTCAGAAACTCCT+TGG 0.490384 1_2:-10402445 None:intergenic
ATGCAGGCAGCAGCACTAGA+AGG 0.492918 1_2:+10399241 Msa0055430:intron
GATGCTGGTTGGACCTATAA+GGG 0.492991 1_2:+10399793 Msa0055430:CDS
TCTAAGAACTAAGATGCATA+AGG 0.495636 1_2:+10400583 Msa0055430:CDS
AGTATAATCAATAATGAAGA+AGG 0.495893 1_2:+10396885 Msa0055430:CDS
TGCCGGAAAGACTACTCTAA+TGG 0.498293 1_2:+10402538 Msa0055430:CDS
TCAGCAAGATGTCAAGGGGT+TGG 0.499033 1_2:+10398920 Msa0055430:CDS
AAATACCAATATGGTGGAAG+TGG 0.501046 1_2:+10405700 Msa0055430:CDS
GTCACGGTAGCAATGTTCAA+TGG 0.502619 1_2:+10400653 Msa0055430:CDS
CCGACTCGAAAGAAAATCTC+TGG 0.503772 1_2:+10401994 Msa0055430:CDS
GAATTTGTGAGGAATTACTT+TGG 0.504331 1_2:+10405822 Msa0055430:CDS
AGAGGATGGAGGAGCTTACA+TGG 0.504405 1_2:+10400613 Msa0055430:CDS
ATCAAAGCAGTCAGTACTCC+AGG 0.504663 1_2:-10402503 None:intergenic
GTCGAAGCACAAGTTTATGT+TGG 0.505558 1_2:+10397725 Msa0055430:CDS
TTATAGTTGCAAGCACTGTT+GGG 0.506003 1_2:+10401057 Msa0055430:CDS
AGGATCAGAAGCAAATCTTA+AGG 0.508267 1_2:+10403854 Msa0055430:CDS
CTGGGAGAGTAACATACAAT+GGG 0.508511 1_2:+10398798 Msa0055430:CDS
CTCACGGTTGAGATATTGTA+AGG 0.511332 1_2:-10401808 None:intergenic
AAACGGTGACATTAGGTGAA+TGG 0.511741 1_2:-10402679 None:intergenic
CAACAATTGCAACCACTCCT+AGG 0.513061 1_2:-10405860 None:intergenic
AAGATTGTGACTTACAGATA+AGG 0.515220 1_2:-10405113 None:intergenic
GTAGGAGATGGAATGATAAG+AGG 0.515730 1_2:+10399436 Msa0055430:CDS
CATAAGGATACTGTAGAGGA+TGG 0.516125 1_2:+10400599 Msa0055430:CDS
TATAACTCCTTTGAATCTTG+AGG 0.517113 1_2:-10404064 None:intergenic
TATTGGTATTGGATTGGTGT+AGG 0.517782 1_2:+10401738 Msa0055430:CDS
TTTGCCTTATGCAGCAGCAC+AGG 0.518688 1_2:+10404486 Msa0055430:CDS
ATATAACAAAGATTCATAAA+CGG 0.520262 1_2:-10402696 None:intergenic
GAGAAACAAACAATTGATCC+AGG 0.520815 1_2:+10404027 Msa0055430:CDS
AAAGTGGTCTTTCCAGAGCC+TGG 0.521563 1_2:-10398090 None:intergenic
GACAGTATGGCAGCAACATG+TGG 0.521580 1_2:-10405043 None:intergenic
CTTGAGTGACTTTGAAAATG+TGG 0.522018 1_2:-10400450 None:intergenic
AGGGTATCAATGGCGCCTTT+AGG 0.523411 1_2:+10402480 Msa0055430:CDS
AGTCAGTACTCCAGGCCTAA+AGG 0.523666 1_2:-10402495 None:intergenic
TTCTTTGTGGTCAAGACACT+AGG 0.524213 1_2:-10400349 None:intergenic
CGATGAAGAAGCTCTTAAAT+GGG 0.525006 1_2:+10396821 Msa0055430:CDS
GGAGTACTGACTGCTTTGAT+GGG 0.526622 1_2:+10402506 Msa0055430:CDS
TATCATAGAAGCTGTCATAT+GGG 0.526896 1_2:+10400796 Msa0055430:CDS
GCTTTCTCAGCAAGATGTCA+AGG 0.529438 1_2:+10398914 Msa0055430:CDS
TCAAATCTCACTTCAACTGT+TGG 0.530461 1_2:-10397692 None:intergenic
CGTGCACAAATGGTTTCTGT+GGG 0.533075 1_2:+10401467 Msa0055430:CDS
GATCATTGTATATGCCATGA+TGG 0.533248 1_2:+10404913 Msa0055430:CDS
TTCATGGACGAGATATCGAC+TGG 0.533272 1_2:+10399821 Msa0055430:CDS
GTCTTGACCACAAAGAAATA+CGG 0.533645 1_2:+10400355 Msa0055430:CDS
ATCAATAATGAAGAAGGTGA+AGG 0.534541 1_2:+10396891 Msa0055430:CDS
ATATGTCAATACTTGGCTGA+TGG 0.536229 1_2:-10403481 None:intergenic
TGGATACTATAGGCTATTGA+AGG 0.536301 1_2:+10403771 Msa0055430:intron
ATCCAATACCAATAAGCTTG+TGG 0.536667 1_2:-10401729 None:intergenic
AGATTGTGACTTACAGATAA+GGG 0.538113 1_2:-10405112 None:intergenic
CACAGTTCGTCCTGTGTCAA+CGG 0.538764 1_2:-10403447 None:intergenic
AATCTTTGTTATATTCGGCA+TGG 0.539111 1_2:+10402705 Msa0055430:CDS
GATATCATATTGCTCACAGA+TGG 0.539597 1_2:+10399965 Msa0055430:CDS
TATACCTCCTCAAGATTCAA+AGG 0.539803 1_2:+10404057 Msa0055430:CDS
CTTTCTCAGCAAGATGTCAA+GGG 0.540991 1_2:+10398915 Msa0055430:CDS
GATGGGCAAATTGTGTATCA+AGG 0.542034 1_2:+10399983 Msa0055430:CDS
TTCAAGTGTCCTGAAAGAAA+AGG 0.542618 1_2:+10400046 Msa0055430:CDS
ATTGGTGTAGGAGCATTGAT+TGG 0.542757 1_2:+10401750 Msa0055430:CDS
GTTGAAAGTCCAGTCTCGCC+TGG 0.543485 1_2:-10403296 None:intergenic
GGTTGATGGCAGCATTAGGA+AGG 0.543509 1_2:+10401030 Msa0055430:CDS
TAATCCTGCAACATGGATGT+TGG 0.544313 1_2:+10403818 Msa0055430:CDS
ATGATTTGTTACCTCATCAA+AGG 0.544928 1_2:-10403510 None:intergenic
ATGTTGGAAGTTACATCAGC+AGG 0.546145 1_2:+10403834 Msa0055430:CDS
TATGGCAGCAACATGTGGGT+TGG 0.548049 1_2:-10405038 None:intergenic
AGGAGCCGTATGAGATGAAA+GGG 0.548257 1_2:-10406963 None:intergenic
AACATGTGGGTTGGGAGTGA+TGG 0.548527 1_2:-10405029 None:intergenic
GGAGGATTTGTGATTTCAAG+AGG 0.548598 1_2:+10401110 Msa0055430:CDS
CATAAGTGGAAGGAGGGGAA+TGG 0.549516 1_2:+10402185 Msa0055430:CDS
GGGCTTATTCTCTTCCACCA+TGG 0.549728 1_2:+10400753 Msa0055430:CDS
CAAACTTGAGAATGGTCAAA+GGG 0.550275 1_2:+10405794 Msa0055430:CDS
ACAGAAACTCGGAACTATAC+CGG 0.551395 1_2:+10403895 Msa0055430:CDS
AGAAGCCCTTTCATCTCATA+CGG 0.552395 1_2:+10406958 Msa0055430:CDS
TTTGCACTTCCTCATATGCT+AGG 0.553077 1_2:-10406061 None:intergenic
TGACATCAAGGAAAGATCAA+TGG 0.553676 1_2:+10400191 Msa0055430:CDS
GAGGAGCCGTATGAGATGAA+AGG 0.555741 1_2:-10406964 None:intergenic
TTGATGGGTGTAAGTGGTGC+CGG 0.555828 1_2:+10402521 Msa0055430:CDS
AAAATGTAAAGGGGAGATGC+TGG 0.556770 1_2:+10399778 Msa0055430:intron
TCTGGGAGAGTAACATACAA+TGG 0.558505 1_2:+10398797 Msa0055430:CDS
GGAGTTCCTAAGATCAAAGA+TGG 0.559701 1_2:+10403792 Msa0055430:CDS
TCTTACCTTGAGAATATAGT+CGG 0.560108 1_2:-10399284 None:intergenic
GTGGAATCATAAAGCCTCAA+AGG 0.560810 1_2:+10397944 Msa0055430:CDS
ATACAATGATCCCATATACC+AGG 0.560963 1_2:-10404901 None:intergenic
AGCTAGCATAAGTGGAAGGA+GGG 0.562654 1_2:+10402179 Msa0055430:CDS
TTGCAGCTGCTCTAGCATCA+AGG 0.564904 1_2:-10403400 None:intergenic
ACGTGCACAAATGGTTTCTG+TGG 0.565156 1_2:+10401466 Msa0055430:CDS
CACTAATGTATACAGAAACT+CGG 0.565572 1_2:+10403884 Msa0055430:CDS
GTGCCACTAAGTTGATAATG+AGG 0.565943 1_2:-10407043 None:intergenic
ACTGCTTTGATGGGTGTAAG+TGG 0.566284 1_2:+10402515 Msa0055430:CDS
GAAATACGGTGTTAACAAGA+AGG 0.566769 1_2:+10400369 Msa0055430:CDS
AACATGCACAAACTTGAGAA+TGG 0.571014 1_2:+10405786 Msa0055430:CDS
GAAACAAAGATAGCAGAAGA+AGG 0.571867 1_2:+10402111 Msa0055430:intron
ACCTATGTGAAATATCTGAA+AGG 0.572041 1_2:-10400275 None:intergenic
GGAATTGTATTACAGGGGAA+AGG 0.572479 1_2:+10404321 Msa0055430:intron
TGCATGGACATTGTATGGAT+TGG 0.572882 1_2:+10405743 Msa0055430:CDS
AGTTGATCAAGCTACTAGAA+AGG 0.573357 1_2:+10402745 Msa0055430:CDS
GAAGCACAAGTTTATGTTGG+AGG 0.573375 1_2:+10397728 Msa0055430:CDS
AGTCAATATGATAATCACAT+TGG 0.574921 1_2:+10398866 Msa0055430:CDS
CCACATCTTGGTTCAGACCC+TGG 0.575451 1_2:+10404883 Msa0055430:CDS
ATTCCATATTGCATAGAATG+AGG 0.577268 1_2:-10405068 None:intergenic
GATGATGCAGATGTTTATTG+AGG 0.577757 1_2:+10403220 Msa0055430:intron
TTATGCAATAGGTGACATCA+AGG 0.581898 1_2:+10400179 Msa0055430:intron
TAACAAGAAGGAGCTTCTGA+AGG 0.582509 1_2:+10400381 Msa0055430:CDS
AGGAGTGGTTGCAATTGTTG+TGG 0.583205 1_2:+10405863 Msa0055430:CDS
CTCATATGCTAGGAATAGGA+AGG 0.583411 1_2:-10406051 None:intergenic
TGCATCTGCAGCATTCAGAA+AGG 0.583721 1_2:+10401900 Msa0055430:intron
TCAATAATGAAGAAGGTGAA+GGG 0.585744 1_2:+10396892 Msa0055430:CDS
TAAACATGACTTCCTAGGAG+TGG 0.586266 1_2:+10405848 Msa0055430:CDS
GACAGAAAATACCAATATGG+TGG 0.586976 1_2:+10405694 Msa0055430:intron
AGCAGCACTAGAAGGACAGG+AGG 0.587597 1_2:+10399249 Msa0055430:CDS
ATACGCTGTAGACATGCCTC+AGG 0.590896 1_2:+10402251 Msa0055430:CDS
GCCAATAGCATAGTAAGTGA+TGG 0.592765 1_2:-10400822 None:intergenic
ATATGTGCTGACATTATGGT+AGG 0.595935 1_2:+10399418 Msa0055430:CDS
GTTTATCATTACACACATGA+AGG 0.596122 1_2:-10406986 None:intergenic
ATCTGATTTCATCAAAAGTG+AGG 0.600752 1_2:-10402230 None:intergenic
AACTCCTTTGAATCTTGAGG+AGG 0.602006 1_2:-10404061 None:intergenic
GCATTCAGAAAGGATCAAGC+AGG 0.604617 1_2:+10401910 Msa0055430:intron
TGTCCACTCAAATCCCATCA+TGG 0.606589 1_2:-10404927 None:intergenic
TGTAAAGGGGAGATGCTGGT+TGG 0.606709 1_2:+10399782 Msa0055430:intron
ACTTGCTAACTTTGATACCA+AGG 0.607989 1_2:-10406028 None:intergenic
CAGGGTCTGAACCAAGATGT+GGG 0.610831 1_2:-10404882 None:intergenic
ACAAACTTGAGAATGGTCAA+AGG 0.612554 1_2:+10405793 Msa0055430:CDS
AGAAGGACAGGAGGCAAGTG+TGG 0.614364 1_2:+10399258 Msa0055430:CDS
CAAGTAGTTCTAACATATGG+AGG 0.614872 1_2:+10396757 Msa0055430:CDS
CTAGCATCAAGGCCAGAGGT+TGG 0.617708 1_2:-10403389 None:intergenic
ATATCATATTGCTCACAGAT+GGG 0.617950 1_2:+10399966 Msa0055430:CDS
ATCATTGTATATGCCATGAT+GGG 0.619167 1_2:+10404914 Msa0055430:CDS
TCATCCATGAATATTATCGA+TGG 0.619188 1_2:-10403365 None:intergenic
CATATTTGATGCCTTTGATG+AGG 0.620485 1_2:+10403499 Msa0055430:CDS
TGAACTACTAAGAAGAGAGA+AGG 0.620745 1_2:+10399085 Msa0055430:CDS
GTGAGGAACACCGTTGACAC+AGG 0.621749 1_2:+10403437 Msa0055430:CDS
GGAAGAGAATAAGCCCATGA+AGG 0.624504 1_2:-10400746 None:intergenic
TCTGATTTCATCAAAAGTGA+GGG 0.624971 1_2:-10402229 None:intergenic
CCAGGGTCTGAACCAAGATG+TGG 0.624972 1_2:-10404883 None:intergenic
AGAGTAACATACAATGGGAA+AGG 0.625058 1_2:+10398803 Msa0055430:CDS
GCTGACATTATGGTAGGAGA+TGG 0.625547 1_2:+10399424 Msa0055430:CDS
GAATCAAATGAGCGCAATGG+CGG 0.628557 1_2:-10403668 None:intergenic
ATAAAGCTAGCATAAGTGGA+AGG 0.628883 1_2:+10402175 Msa0055430:CDS
ATGATAAGAGGTATTTCAGG+AGG 0.631528 1_2:+10399448 Msa0055430:CDS
ACAGTATGGCAGCAACATGT+GGG 0.631564 1_2:-10405042 None:intergenic
TGCCAAAGCCAAAAGCAAAG+TGG 0.631948 1_2:-10398106 None:intergenic
GCCTTTCAGATATTTCACAT+AGG 0.631975 1_2:+10400274 Msa0055430:CDS
AAGCTAGCATAAGTGGAAGG+AGG 0.632417 1_2:+10402178 Msa0055430:CDS
TTGTGGTCAAGACACTAGGA+TGG 0.632606 1_2:-10400345 None:intergenic
GATGCATAAGGATACTGTAG+AGG 0.632827 1_2:+10400595 Msa0055430:CDS
ATGGTTATAATCCTGCAACA+TGG 0.635121 1_2:+10403811 Msa0055430:CDS
CTTCTACTTATGAAATTGGG+AGG 0.636332 1_2:+10403618 Msa0055430:CDS
TTGTATAGAGACCAAAACAA+TGG 0.636828 1_2:+10396695 Msa0055430:exon
TGCTCTAGCATCAAGGCCAG+AGG 0.638519 1_2:-10403393 None:intergenic
GTTGATGGCAGCATTAGGAA+GGG 0.639395 1_2:+10401031 Msa0055430:CDS
TGATAAGAGGTATTTCAGGA+GGG 0.642292 1_2:+10399449 Msa0055430:CDS
TCAAGCAGGTCTATCTGAGG+AGG 0.643626 1_2:+10401924 Msa0055430:CDS
TGGGTTGGGAGTGATGGCCA+TGG 0.643670 1_2:-10405023 None:intergenic
TTTCTCAGCAAGATGTCAAG+GGG 0.644020 1_2:+10398916 Msa0055430:CDS
AAAGGGTTGAAGAATTTGTG+AGG 0.644316 1_2:+10405811 Msa0055430:CDS
TATCATTACACACATGAAGG+AGG 0.644383 1_2:-10406983 None:intergenic
GGTAACCGACTATATTCTCA+AGG 0.644498 1_2:+10399279 Msa0055430:CDS
GTGGTCTTTCCAGAGCCTGG+TGG 0.644839 1_2:-10398087 None:intergenic
AACTTAAGGAAAGAATTGAA+AGG 0.645921 1_2:+10397015 Msa0055430:CDS
CTTGCAGAAAACGATCTCGA+TGG 0.648265 1_2:-10402141 None:intergenic
CGTTGACACAGGACGAACTG+TGG 0.648918 1_2:+10403448 Msa0055430:CDS
GCTAGCATAAGTGGAAGGAG+GGG 0.649745 1_2:+10402180 Msa0055430:CDS
GCATTCTGTCCATACATCAA+CGG 0.653143 1_2:-10401504 None:intergenic
TACAATGATCCCATATACCA+GGG 0.658528 1_2:-10404900 None:intergenic
AATGAATCAAATGAGCGCAA+TGG 0.659097 1_2:-10403671 None:intergenic
GTAGCTTGATCAACTTCAGG+TGG 0.660737 1_2:-10402737 None:intergenic
AAGGATACTGTAGAGGATGG+AGG 0.662442 1_2:+10400602 Msa0055430:CDS
ATGCCATGATGGGATTTGAG+TGG 0.663142 1_2:+10404924 Msa0055430:CDS
GAGGATGGAGGAGCTTACAT+GGG 0.664746 1_2:+10400614 Msa0055430:CDS
CCATATTGCATAGAATGAGG+AGG 0.666027 1_2:-10405065 None:intergenic
TGACGTTGATGCCTATATGA+AGG 0.669460 1_2:+10399130 Msa0055430:CDS
TTAGCTGGAAGGAAAACTGG+TGG 0.671495 1_2:+10402566 Msa0055430:CDS
CTTCTATGGTATGATGACCA+TGG 0.674474 1_2:+10405006 Msa0055430:CDS
GGATCAAGCAGGTCTATCTG+AGG 0.676432 1_2:+10401921 Msa0055430:CDS
AGGGTCTGAACCAAGATGTG+GGG 0.699686 1_2:-10404881 None:intergenic
GTGCACAAATGGTTTCTGTG+GGG 0.734759 1_2:+10401468 Msa0055430:CDS
ATGTTAGTGAAACCAAACTG+TGG 0.805163 1_2:-10396653 None:intergenic
CAATTGTAATGAGAACAGTG+AGG 0.836932 1_2:+10403420 Msa0055430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTAAATAATTTACATTATA+AGG + chr1_2:10399174-10399193 Msa0055430:intron 10.0%
!! AATACAATAATTTAAGAATT+GGG - chr1_2:10404836-10404855 None:intergenic 10.0%
!!! AATTATTGTATTGTATTTTT+AGG + chr1_2:10404844-10404863 Msa0055430:intron 10.0%
!! AACTATTATTATTAAACTAT+TGG + chr1_2:10405229-10405248 Msa0055430:intron 10.0%
!!! TAATCTTTTTCTATTTGTTA+AGG + chr1_2:10397855-10397874 Msa0055430:intron 15.0%
!!! AATCTTTTTCTATTTGTTAA+GGG + chr1_2:10397856-10397875 Msa0055430:intron 15.0%
!! AAAAAAAATAAAGACAGTTT+AGG - chr1_2:10398298-10398317 None:intergenic 15.0%
!!! TCTTTATTTTTTTTGCAAAT+TGG + chr1_2:10398304-10398323 Msa0055430:intron 15.0%
!! TTTGCTAATTTAAAAAAATG+AGG + chr1_2:10398677-10398696 Msa0055430:intron 15.0%
!! TTGCTAATTTAAAAAAATGA+GGG + chr1_2:10398678-10398697 Msa0055430:intron 15.0%
!!! ATTTAAAATGTTACAGATTT+TGG + chr1_2:10399387-10399406 Msa0055430:intron 15.0%
!!! TTTAAAATGTTACAGATTTT+GGG + chr1_2:10399388-10399407 Msa0055430:intron 15.0%
!! ACTTAAAATTGAAACTTAAA+AGG + chr1_2:10399716-10399735 Msa0055430:intron 15.0%
!! GAAATAAAATGATTTCTTAA+AGG - chr1_2:10400126-10400145 None:intergenic 15.0%
!! TATTCATTATTAGAAACAAA+GGG - chr1_2:10401584-10401603 None:intergenic 15.0%
!! TTATTCATTATTAGAAACAA+AGG - chr1_2:10401585-10401604 None:intergenic 15.0%
!! AATCTAATAACATTATTTCA+AGG - chr1_2:10402025-10402044 None:intergenic 15.0%
!! ATATAACAAAGATTCATAAA+CGG - chr1_2:10402699-10402718 None:intergenic 15.0%
!!! TTATGAATCTTTGTTATATT+CGG + chr1_2:10402700-10402719 Msa0055430:CDS 15.0%
!!! GTCAATTTTTTCTTATAAAT+AGG - chr1_2:10402859-10402878 None:intergenic 15.0%
!! ATATATATGAATTAAATCCA+TGG + chr1_2:10403170-10403189 Msa0055430:intron 15.0%
!! ATGTAAAAAATGAAATTCAA+AGG + chr1_2:10404300-10404319 Msa0055430:intron 15.0%
!! CAATACAATAATTTAAGAAT+TGG - chr1_2:10404837-10404856 None:intergenic 15.0%
!! AGTATAATCAATAATGAAGA+AGG + chr1_2:10396885-10396904 Msa0055430:CDS 20.0%
!!! ACAACCATAATTTAAAACTT+TGG - chr1_2:10397077-10397096 None:intergenic 20.0%
!! AAAAATCAATCATTAACTCT+AGG - chr1_2:10397638-10397657 None:intergenic 20.0%
!!! AGAATCTAAAACATCAAAAA+AGG - chr1_2:10398007-10398026 None:intergenic 20.0%
!!! AAAACTTGCTAAAGATTTAA+AGG + chr1_2:10398131-10398150 Msa0055430:CDS 20.0%
!!! AAATTTTCATCTGTTTTTGA+TGG + chr1_2:10398193-10398212 Msa0055430:intron 20.0%
!!! AATTTTCATCTGTTTTTGAT+GGG + chr1_2:10398194-10398213 Msa0055430:intron 20.0%
!!! TTTTTATTATTAGAGCGAAT+AGG + chr1_2:10398242-10398261 Msa0055430:intron 20.0%
!! CTAATAGTAAAAGTTTACAA+GGG - chr1_2:10398371-10398390 None:intergenic 20.0%
!!! CTTGTAAACTTTTACTATTA+GGG + chr1_2:10398370-10398389 Msa0055430:intron 20.0%
!!! TAAGTTTTTCTATGAAACTT+AGG + chr1_2:10398466-10398485 Msa0055430:intron 20.0%
!! TTGAATGATGTTTACAATTT+CGG + chr1_2:10398648-10398667 Msa0055430:intron 20.0%
!! TATAATTAAAACGAGTGAAT+AGG - chr1_2:10398743-10398762 None:intergenic 20.0%
!! TATGACATATGATTTATTGA+CGG - chr1_2:10399578-10399597 None:intergenic 20.0%
!! GTAAAAAATGTTTACATTGA+CGG + chr1_2:10399672-10399691 Msa0055430:intron 20.0%
!! TAAAATTGAAACTTAAAAGG+AGG + chr1_2:10399719-10399738 Msa0055430:intron 20.0%
!!! TTTTTTGGTGAAAAATGTAA+AGG + chr1_2:10399767-10399786 Msa0055430:intron 20.0%
!!! TTTTTGGTGAAAAATGTAAA+GGG + chr1_2:10399768-10399787 Msa0055430:intron 20.0%
!! TCAAATAATTCATAAGTTTC+TGG - chr1_2:10399944-10399963 None:intergenic 20.0%
!! TTAACAGTAACAAAACTATA+AGG - chr1_2:10400241-10400260 None:intergenic 20.0%
!!! TTATAGTTTTGTTACTGTTA+AGG + chr1_2:10400240-10400259 Msa0055430:CDS 20.0%
!!! TAAATTTTAGAGACCAAAAT+TGG - chr1_2:10401175-10401194 None:intergenic 20.0%
!!! TATTATTTGTTAATGACGAA+TGG + chr1_2:10401375-10401394 Msa0055430:intron 20.0%
!!! TTTTTTTTTTTTTGCATCAG+AGG + chr1_2:10401443-10401462 Msa0055430:intron 20.0%
!! ATTCATTATTAGAAACAAAG+GGG - chr1_2:10401583-10401602 None:intergenic 20.0%
!! ATTTCCTACAATCAATATAA+CGG - chr1_2:10402419-10402438 None:intergenic 20.0%
!!! TTTTTTCTTATAAATAGGAC+CGG - chr1_2:10402854-10402873 None:intergenic 20.0%
!! CATTGTATAAATGATGTATT+TGG - chr1_2:10402928-10402947 None:intergenic 20.0%
!! GTCAAATGTTTCTTATAAAT+AGG + chr1_2:10402958-10402977 Msa0055430:intron 20.0%
!! TATGTAAAATATCTTTACAC+TGG + chr1_2:10403141-10403160 Msa0055430:intron 20.0%
!! TATGAAATTTATCACCTAAA+AGG - chr1_2:10403565-10403584 None:intergenic 20.0%
!! ATGCTTAATTTCATTTACAT+TGG - chr1_2:10403711-10403730 None:intergenic 20.0%
!! AAGATAAAAAGAATTCTAAC+CGG - chr1_2:10403917-10403936 None:intergenic 20.0%
!!! CTGATACTTTTTAATTGTTT+AGG + chr1_2:10404005-10404024 Msa0055430:intron 20.0%
!! TATGCTTCTGTTATATTTAT+TGG + chr1_2:10404376-10404395 Msa0055430:CDS 20.0%
!! ATATTTATTGGAGTACAAAA+TGG + chr1_2:10404388-10404407 Msa0055430:CDS 20.0%
!!! ATGACTTTTTTGTTTTAACT+TGG + chr1_2:10404550-10404569 Msa0055430:intron 20.0%
!!! TACTCTGAGATTTATTTTAA+AGG + chr1_2:10404633-10404652 Msa0055430:intron 20.0%
!! AGAGAAGTAAAAAATAAGAT+AGG - chr1_2:10404776-10404795 None:intergenic 20.0%
!! AAAACATATGCATTGAAATT+TGG - chr1_2:10405380-10405399 None:intergenic 20.0%
!!! AAAATACTGAGTTTTAAAGA+TGG + chr1_2:10405412-10405431 Msa0055430:intron 20.0%
!! CTTATGTAAAAAGAAACAAT+AGG + chr1_2:10406176-10406195 Msa0055430:intron 20.0%
!!! CTTTATTTTATGACAAACAA+TGG - chr1_2:10406229-10406248 None:intergenic 20.0%
!! CATTGTTTGTCATAAAATAA+AGG + chr1_2:10406227-10406246 Msa0055430:intron 20.0%
!!! ATCTCTTTTACTTTTTCTTT+TGG - chr1_2:10406274-10406293 None:intergenic 20.0%
!! AAAAGAAAAAGTAAAAGAGA+TGG + chr1_2:10406273-10406292 Msa0055430:intron 20.0%
!!! CTTCAGTTCTAAATTTAATT+TGG - chr1_2:10406672-10406691 None:intergenic 20.0%
!! AGTGTTACTATATGTTTACA+TGG - chr1_2:10396575-10396594 None:intergenic 25.0%
! AAAAAATGTATACCACAGTT+TGG + chr1_2:10396641-10396660 Msa0055430:five_prime_UTR 25.0%
! GAGATTGATATAAAAAAGCT+TGG + chr1_2:10396918-10396937 Msa0055430:CDS 25.0%
! AAAGTTCTTGTTGAAACTTA+AGG + chr1_2:10397001-10397020 Msa0055430:CDS 25.0%
! AACTTAAGGAAAGAATTGAA+AGG + chr1_2:10397015-10397034 Msa0055430:CDS 25.0%
!!! TTCGCCAAAGTTTTAAATTA+TGG + chr1_2:10397070-10397089 Msa0055430:intron 25.0%
! TTTATCTTGCTTTCAAAAGA+AGG - chr1_2:10397116-10397135 None:intergenic 25.0%
!! TAGCAACATTTTGTACTAAT+TGG + chr1_2:10397360-10397379 Msa0055430:intron 25.0%
!!! AGAGTTTAAATTTTGAAGCA+TGG + chr1_2:10397581-10397600 Msa0055430:intron 25.0%
! TTAAACTAAATGTACAGAGT+TGG + chr1_2:10397659-10397678 Msa0055430:intron 25.0%
!!! ACATTTTGAAGGATATGTAA+TGG - chr1_2:10397922-10397941 None:intergenic 25.0%
!! TTGTAGAATGACATTACTTT+TGG + chr1_2:10398062-10398081 Msa0055430:intron 25.0%
!!! TGTAGAATGACATTACTTTT+GGG + chr1_2:10398063-10398082 Msa0055430:intron 25.0%
! TTGCTAAAGATTTAAAGGTA+AGG + chr1_2:10398136-10398155 Msa0055430:intron 25.0%
! ACATTAATGACACCAAAATT+CGG - chr1_2:10398165-10398184 None:intergenic 25.0%
! CCTAATAGTAAAAGTTTACA+AGG - chr1_2:10398372-10398391 None:intergenic 25.0%
!! CCTTGTAAACTTTTACTATT+AGG + chr1_2:10398369-10398388 Msa0055430:intron 25.0%
! TTCATAGAAAAACTTAGTGA+TGG - chr1_2:10398462-10398481 None:intergenic 25.0%
! GTAAAATTTAGGTCATCTTA+AGG - chr1_2:10398552-10398571 None:intergenic 25.0%
!! TAAGATGACCTAAATTTTAC+AGG + chr1_2:10398552-10398571 Msa0055430:intron 25.0%
!! AAGATGACCTAAATTTTACA+GGG + chr1_2:10398553-10398572 Msa0055430:intron 25.0%
! CTAATTTCCCTGTAAAATTT+AGG - chr1_2:10398563-10398582 None:intergenic 25.0%
! TGAATGATGTTTACAATTTC+GGG + chr1_2:10398649-10398668 Msa0055430:intron 25.0%
! AGTCAATATGATAATCACAT+TGG + chr1_2:10398866-10398885 Msa0055430:CDS 25.0%
! GATTCATCAAACATTATGAA+AGG + chr1_2:10399315-10399334 Msa0055430:intron 25.0%
!!! CAACAGGTATTTTATTTATC+AGG + chr1_2:10399488-10399507 Msa0055430:intron 25.0%
!! TCTAAAACTGTTTACAATGA+CGG - chr1_2:10399555-10399574 None:intergenic 25.0%
!! TTTTGGTGAAAAATGTAAAG+GGG + chr1_2:10399769-10399788 Msa0055430:intron 25.0%
! TTGTTCTAATGTTATGCAAT+AGG + chr1_2:10400168-10400187 Msa0055430:intron 25.0%
!! TATTGCTCATATATTTTGCT+TGG + chr1_2:10400494-10400513 Msa0055430:intron 25.0%
! GCTAAATAAATAAGCTGAAA+AGG - chr1_2:10400542-10400561 None:intergenic 25.0%
!!! ATTGGTATTTTTAGAATCCA+TGG - chr1_2:10400773-10400792 None:intergenic 25.0%
!! TTAATTGATGATTTGTGATG+TGG - chr1_2:10400879-10400898 None:intergenic 25.0%
!!! CAGAGATGTATTTGATTTTT+TGG - chr1_2:10400938-10400957 None:intergenic 25.0%
! CAAAAAATCAAATACATCTC+TGG + chr1_2:10400936-10400955 Msa0055430:intron 25.0%
!! ATTTGCATTACTTGTAGTTT+TGG + chr1_2:10401082-10401101 Msa0055430:CDS 25.0%
!!! ATTACTTGTAGTTTTGGTTT+TGG + chr1_2:10401088-10401107 Msa0055430:CDS 25.0%
!!! TTACTTGTAGTTTTGGTTTT+GGG + chr1_2:10401089-10401108 Msa0055430:CDS 25.0%
!! ATCGAGTAAATAACCAATTT+TGG + chr1_2:10401159-10401178 Msa0055430:intron 25.0%
!! CATCATATTAGTTTACTTGA+GGG - chr1_2:10401217-10401236 None:intergenic 25.0%
!! TCATCATATTAGTTTACTTG+AGG - chr1_2:10401218-10401237 None:intergenic 25.0%
! TAAAAGACATTAAAGACGAT+TGG + chr1_2:10401324-10401343 Msa0055430:intron 25.0%
! AAAAGACATTAAAGACGATT+GGG + chr1_2:10401325-10401344 Msa0055430:intron 25.0%
! CAATGTTTCATTGGAATTAT+GGG - chr1_2:10401676-10401695 None:intergenic 25.0%
! CATAATTCCAATGAAACATT+GGG + chr1_2:10401675-10401694 Msa0055430:CDS 25.0%
!! ATTCAACTTTTTGTTCACAT+TGG + chr1_2:10401785-10401804 Msa0055430:CDS 25.0%
! TCAAAAAGAGATATGAAAGA+CGG - chr1_2:10401836-10401855 None:intergenic 25.0%
!! TTGAGATTTTGAACTTTAGT+TGG + chr1_2:10401852-10401871 Msa0055430:intron 25.0%
!!! TTGTTTTCTTGTTTGAAGTT+TGG + chr1_2:10402047-10402066 Msa0055430:intron 25.0%
! TCACAGTCAAAAATATGTTA+TGG - chr1_2:10402081-10402100 None:intergenic 25.0%
! CCAATAACATGAAAATAGAA+AGG - chr1_2:10402321-10402340 None:intergenic 25.0%
!! CCTTTCTATTTTCATGTTAT+TGG + chr1_2:10402318-10402337 Msa0055430:intron 25.0%
!!! GCAAATGTTTTTTGATTCTT+TGG - chr1_2:10402626-10402645 None:intergenic 25.0%
! ATGTTTCTTATAAATAGGAC+CGG + chr1_2:10402963-10402982 Msa0055430:intron 25.0%
!!! GTTTAATTTGTATCAACTGT+CGG + chr1_2:10403009-10403028 Msa0055430:intron 25.0%
!!! TACTAAGTCATTGATTTGAT+TGG - chr1_2:10403068-10403087 None:intergenic 25.0%
! AAAACAAAATTCCACCTTAT+TGG - chr1_2:10403540-10403559 None:intergenic 25.0%
!!! AATAAGGTGGAATTTTGTTT+TGG + chr1_2:10403539-10403558 Msa0055430:intron 25.0%
! TCATTTGATTCATTACTTTG+AGG + chr1_2:10403680-10403699 Msa0055430:CDS 25.0%
!! ATTTGCTACTATTGTTACAT+TGG + chr1_2:10403731-10403750 Msa0055430:intron 25.0%
! TTATAACCATCTTTGATCTT+AGG - chr1_2:10403801-10403820 None:intergenic 25.0%
!! AAAGTATCAGTAACAATAGA+TGG - chr1_2:10403995-10404014 None:intergenic 25.0%
!!! TCTTGTTTGGAATCATATTT+TGG + chr1_2:10404215-10404234 Msa0055430:CDS 25.0%
! ATTCAAAGGAATTGTATTAC+AGG + chr1_2:10404314-10404333 Msa0055430:intron 25.0%
! TTCAAAGGAATTGTATTACA+GGG + chr1_2:10404315-10404334 Msa0055430:intron 25.0%
! AAACTATAATGATGCAAGAA+TGG - chr1_2:10405151-10405170 None:intergenic 25.0%
! TCTTGGAAAGTTTAATGAAT+AGG - chr1_2:10405264-10405283 None:intergenic 25.0%
!!! AATTTAACTTCTGAGACTTT+TGG + chr1_2:10405556-10405575 Msa0055430:intron 25.0%
! AATGACAGAAAATACCAATA+TGG + chr1_2:10405691-10405710 Msa0055430:intron 25.0%
!!! TGAAGTGATTTCATCTTTTT+TGG - chr1_2:10405947-10405966 None:intergenic 25.0%
!! AACAATATTTTCCCATTTGT+AGG - chr1_2:10406094-10406113 None:intergenic 25.0%
! TTTCAAGATGTTATTGAGTT+TGG + chr1_2:10406300-10406319 Msa0055430:intron 25.0%
!!! AGTTTGGATCCATTTTTTAT+TGG + chr1_2:10406316-10406335 Msa0055430:intron 25.0%
!!! GTTTGGATCCATTTTTTATT+GGG + chr1_2:10406317-10406336 Msa0055430:intron 25.0%
!! TTTTATGAATAGTAAGCAAG+CGG - chr1_2:10406418-10406437 None:intergenic 25.0%
! TTTATGCAATGTGGTAAAAT+GGG - chr1_2:10406711-10406730 None:intergenic 25.0%
!! TTTTATGCAATGTGGTAAAA+TGG - chr1_2:10406712-10406731 None:intergenic 25.0%
!! TTTTTATCTTCTCCTCATTT+TGG - chr1_2:10406804-10406823 None:intergenic 25.0%
CAAAAGCAGTGAGATATAAA+AGG + chr1_2:10396546-10396565 Msa0055430:five_prime_UTR 30.0%
TTGTATAGAGACCAAAACAA+TGG + chr1_2:10396695-10396714 Msa0055430:exon 30.0%
CTTCTAATCCTTAGATATGT+AGG - chr1_2:10396864-10396883 None:intergenic 30.0%
ATCAATAATGAAGAAGGTGA+AGG + chr1_2:10396891-10396910 Msa0055430:CDS 30.0%
TCAATAATGAAGAAGGTGAA+GGG + chr1_2:10396892-10396911 Msa0055430:CDS 30.0%
ATAAAAAGAGACTGTGATCA+AGG + chr1_2:10397131-10397150 Msa0055430:intron 30.0%
CTTCTTTGTTAATGTGTTAG+AGG + chr1_2:10397775-10397794 Msa0055430:CDS 30.0%
AGGATATGTAATGGTTTCTT+TGG - chr1_2:10397913-10397932 None:intergenic 30.0%
CATATCCTTCAAAATGTTAG+TGG + chr1_2:10397925-10397944 Msa0055430:CDS 30.0%
! TGATTCCACTAACATTTTGA+AGG - chr1_2:10397933-10397952 None:intergenic 30.0%
TAGTCATGAATTTACCTTTG+AGG - chr1_2:10397961-10397980 None:intergenic 30.0%
!! GTAGAATGACATTACTTTTG+GGG + chr1_2:10398064-10398083 Msa0055430:intron 30.0%
!!! TTTTGGTGTCATTAATGTTG+TGG + chr1_2:10398167-10398186 Msa0055430:intron 30.0%
ATTAGAGCGAATAGGTAAAT+TGG + chr1_2:10398250-10398269 Msa0055430:intron 30.0%
!! GGCTGATGTTTAAAATTTTG+AGG - chr1_2:10398277-10398296 None:intergenic 30.0%
TCCCTAAAATCATAAAGTGT+CGG + chr1_2:10398335-10398354 Msa0055430:intron 30.0%
! ACCGACACTTTATGATTTTA+GGG - chr1_2:10398339-10398358 None:intergenic 30.0%
TAGAAAAACTTAGTGATGGT+TGG - chr1_2:10398458-10398477 None:intergenic 30.0%
TTGACACAAAGTAGAAGTTA+AGG + chr1_2:10398610-10398629 Msa0055430:intron 30.0%
TGATGAAACTTCAGAAATCT+GGG + chr1_2:10398780-10398799 Msa0055430:intron 30.0%
ATATAAGCTGATGTTCTTTG+TGG - chr1_2:10398845-10398864 None:intergenic 30.0%
! CTTATTTCTCACCTTCATAT+AGG - chr1_2:10399144-10399163 None:intergenic 30.0%
!!! GAAACTGCATTTTTTTACTC+TGG + chr1_2:10399196-10399215 Msa0055430:intron 30.0%
TGATTCATTCAAAACTATGC+AGG + chr1_2:10399225-10399244 Msa0055430:intron 30.0%
TCTTACCTTGAGAATATAGT+CGG - chr1_2:10399287-10399306 None:intergenic 30.0%
!! GGTATTTTATTTATCAGGAC+CGG + chr1_2:10399493-10399512 Msa0055430:intron 30.0%
GGTGTATCAAAATTAAACTC+TGG - chr1_2:10399534-10399553 None:intergenic 30.0%
CAATCAATCCATATTCTGAA+TGG + chr1_2:10399887-10399906 Msa0055430:CDS 30.0%
ATATCATATTGCTCACAGAT+GGG + chr1_2:10399966-10399985 Msa0055430:CDS 30.0%
!!! ACTCGAGTTTTTTGAATCAA+TGG + chr1_2:10400021-10400040 Msa0055430:CDS 30.0%
!!! CTCGAGTTTTTTGAATCAAT+GGG + chr1_2:10400022-10400041 Msa0055430:CDS 30.0%
ATCAAACTCATACTTCTTGT+AGG - chr1_2:10400084-10400103 None:intergenic 30.0%
GAAAGATCAATGGCAATATT+GGG + chr1_2:10400201-10400220 Msa0055430:CDS 30.0%
ACCTATGTGAAATATCTGAA+AGG - chr1_2:10400278-10400297 None:intergenic 30.0%
TTTCACATAGGTCAAAAACT+TGG + chr1_2:10400286-10400305 Msa0055430:CDS 30.0%
!!! TTTTGACTTGTCAAAAGGAT+TGG - chr1_2:10400323-10400342 None:intergenic 30.0%
TCTAAGAACTAAGATGCATA+AGG + chr1_2:10400583-10400602 Msa0055430:CDS 30.0%
ACAGCTTCTATGATAGTTAT+TGG - chr1_2:10400791-10400810 None:intergenic 30.0%
TATCATAGAAGCTGTCATAT+GGG + chr1_2:10400796-10400815 Msa0055430:CDS 30.0%
!!! AAATACATCTCTGGTTCTTT+TGG + chr1_2:10400945-10400964 Msa0055430:intron 30.0%
! AATTCTGTTGATTAACCAGA+TGG + chr1_2:10400992-10401011 Msa0055430:intron 30.0%
TACATATTGACAAAACGTCA+TGG + chr1_2:10401284-10401303 Msa0055430:intron 30.0%
GGGATACAAAAAACAATTTC+AGG + chr1_2:10401345-10401364 Msa0055430:intron 30.0%
! TATTTGTTAATGACGAATGG+TGG + chr1_2:10401378-10401397 Msa0055430:intron 30.0%
ATAGCTGTGAATGAATTTCT+TGG + chr1_2:10401528-10401547 Msa0055430:CDS 30.0%
ATGAATTTCTTGGACATAGT+TGG + chr1_2:10401538-10401557 Msa0055430:CDS 30.0%
CAAAAGTAATTGAATGATGC+AGG + chr1_2:10401647-10401666 Msa0055430:intron 30.0%
CCAATGTTTCATTGGAATTA+TGG - chr1_2:10401677-10401696 None:intergenic 30.0%
CCATAATTCCAATGAAACAT+TGG + chr1_2:10401674-10401693 Msa0055430:CDS 30.0%
!! TTGGAACTTTTTCTGATCAT+TGG + chr1_2:10401871-10401890 Msa0055430:intron 30.0%
TCTGATTTCATCAAAAGTGA+GGG - chr1_2:10402232-10402251 None:intergenic 30.0%
ATCTGATTTCATCAAAAGTG+AGG - chr1_2:10402233-10402252 None:intergenic 30.0%
! TTGACCGTTATATTGATTGT+AGG + chr1_2:10402412-10402431 Msa0055430:intron 30.0%
TTGTAGGAAATGAAAAACCA+AGG + chr1_2:10402428-10402447 Msa0055430:intron 30.0%
! AAAACTGGTGGATATATTGA+TGG + chr1_2:10402578-10402597 Msa0055430:CDS 30.0%
AAAAACATTTGCTCGCATAT+CGG + chr1_2:10402634-10402653 Msa0055430:CDS 30.0%
! AATCTTTGTTATATTCGGCA+TGG + chr1_2:10402705-10402724 Msa0055430:CDS 30.0%
GGTGTTCAAATCTTAGTTTA+AGG - chr1_2:10402789-10402808 None:intergenic 30.0%
! GAGTTCAAGTTTATAATCCA+TGG - chr1_2:10403190-10403209 None:intergenic 30.0%
GATGTTTATTGAGGAAGTTA+TGG + chr1_2:10403229-10403248 Msa0055430:intron 30.0%
GAATCCATCGATAATATTCA+TGG + chr1_2:10403361-10403380 Msa0055430:CDS 30.0%
TCATCCATGAATATTATCGA+TGG - chr1_2:10403368-10403387 None:intergenic 30.0%
GCATCAAATATGTCAATACT+TGG - chr1_2:10403491-10403510 None:intergenic 30.0%
!! ATGATTTGTTACCTCATCAA+AGG - chr1_2:10403513-10403532 None:intergenic 30.0%
!!! GAATTTTGTTTTGGCCTTTT+AGG + chr1_2:10403548-10403567 Msa0055430:intron 30.0%
TTCATAAGTAGAAGCTGAAA+AGG - chr1_2:10403612-10403631 None:intergenic 30.0%
TCAGCTTCTACTTATGAAAT+TGG + chr1_2:10403614-10403633 Msa0055430:intron 30.0%
CAGCTTCTACTTATGAAATT+GGG + chr1_2:10403615-10403634 Msa0055430:intron 30.0%
CAAATATATTCTGGTCCATT+AGG + chr1_2:10403645-10403664 Msa0055430:CDS 30.0%
CACTAATGTATACAGAAACT+CGG + chr1_2:10403884-10403903 Msa0055430:CDS 30.0%
TATAACTCCTTTGAATCTTG+AGG - chr1_2:10404067-10404086 None:intergenic 30.0%
GGAAACAGCATTTATCATAT+TGG + chr1_2:10404140-10404159 Msa0055430:CDS 30.0%
ACACTAATAGCTTTCTTGTT+TGG + chr1_2:10404202-10404221 Msa0055430:CDS 30.0%
!!! GGAATCATATTTTGGAACAT+CGG + chr1_2:10404223-10404242 Msa0055430:CDS 30.0%
TCAAAGGAATTGTATTACAG+GGG + chr1_2:10404316-10404335 Msa0055430:intron 30.0%
! CAAGATCTTTTCAATGCAAT+GGG + chr1_2:10404346-10404365 Msa0055430:CDS 30.0%
TTCAGCTGTTAAATGAAGAT+CGG + chr1_2:10404602-10404621 Msa0055430:intron 30.0%
! GTTTGGTCTAACTTCTTTTA+AGG - chr1_2:10404802-10404821 None:intergenic 30.0%
ATTGGGAAAACAAGATTGTT+TGG - chr1_2:10404819-10404838 None:intergenic 30.0%
ATCATTGTATATGCCATGAT+GGG + chr1_2:10404914-10404933 Msa0055430:CDS 30.0%
ATTCCATATTGCATAGAATG+AGG - chr1_2:10405071-10405090 None:intergenic 30.0%
AGATTGTGACTTACAGATAA+GGG - chr1_2:10405115-10405134 None:intergenic 30.0%
AAGATTGTGACTTACAGATA+AGG - chr1_2:10405116-10405135 None:intergenic 30.0%
TCATTAAACTTTCCAAGACT+TGG + chr1_2:10405266-10405285 Msa0055430:intron 30.0%
ACTGTCAGATCTTAATCTAA+TGG - chr1_2:10405357-10405376 None:intergenic 30.0%
GAATTTGTGAGGAATTACTT+TGG + chr1_2:10405822-10405841 Msa0055430:CDS 30.0%
!! TTTGCACTTATTTTCACCTT+TGG + chr1_2:10405903-10405922 Msa0055430:CDS 30.0%
TTGTTCCTTATGCAAATTCT+AGG + chr1_2:10405996-10406015 Msa0055430:intron 30.0%
TACAACCTAGAATTTGCATA+AGG - chr1_2:10406004-10406023 None:intergenic 30.0%
CAAAGTGTATTCCTACAAAT+GGG + chr1_2:10406080-10406099 Msa0055430:intron 30.0%
CAAACGTACCCAATAAAAAA+TGG - chr1_2:10406328-10406347 None:intergenic 30.0%
! AAATTAACATGTTTTGCCTC+CGG + chr1_2:10406536-10406555 Msa0055430:intron 30.0%
! AATTAAGCTTTCTCTCCTTT+TGG - chr1_2:10406565-10406584 None:intergenic 30.0%
AGCATCAATACAAGAAATGT+TGG - chr1_2:10406592-10406611 None:intergenic 30.0%
! TTCTTGTATTGATGCTTCAT+TGG + chr1_2:10406596-10406615 Msa0055430:intron 30.0%
!! TTAATTTGGTTTGCGTGTTT+GGG - chr1_2:10406658-10406677 None:intergenic 30.0%
!! TTTAATTTGGTTTGCGTGTT+TGG - chr1_2:10406659-10406678 None:intergenic 30.0%
! TCTGATCATTTTATGCAATG+TGG - chr1_2:10406720-10406739 None:intergenic 30.0%
AAATGATCAGATAAGTAGAG+AGG + chr1_2:10406729-10406748 Msa0055430:intron 30.0%
GTATGTGAATTATCCTTTGT+AGG + chr1_2:10406897-10406916 Msa0055430:intron 30.0%
AATTATCCTTTGTAGGAATC+TGG + chr1_2:10406904-10406923 Msa0055430:intron 30.0%
!!! GCTTCTTACAATTTTTTGTG+TGG - chr1_2:10406944-10406963 None:intergenic 30.0%
GTTTATCATTACACACATGA+AGG - chr1_2:10406989-10407008 None:intergenic 30.0%
ATGTTAGTGAAACCAAACTG+TGG - chr1_2:10396656-10396675 None:intergenic 35.0%
! TCACTAACATCTCAGTTTTG+AGG + chr1_2:10396666-10396685 Msa0055430:five_prime_UTR 35.0%
! TTCATTGCTCTCCATTGTTT+TGG - chr1_2:10396709-10396728 None:intergenic 35.0%
!! GAGCAAGTAGTTCTAACATA+TGG + chr1_2:10396754-10396773 Msa0055430:CDS 35.0%
!! CAAGTAGTTCTAACATATGG+AGG + chr1_2:10396757-10396776 Msa0055430:CDS 35.0%
ACGATGAAGAAGCTCTTAAA+TGG + chr1_2:10396820-10396839 Msa0055430:CDS 35.0%
CGATGAAGAAGCTCTTAAAT+GGG + chr1_2:10396821-10396840 Msa0055430:CDS 35.0%
AGAGACTTCCTACATATCTA+AGG + chr1_2:10396853-10396872 Msa0055430:CDS 35.0%
ATTCACGATTTCCTTAATCG+CGG + chr1_2:10397209-10397228 Msa0055430:intron 35.0%
GAGTTCATGAATTAACGCAT+CGG + chr1_2:10397455-10397474 Msa0055430:intron 35.0%
TGAAAAAGAGACGAGTGAAT+TGG + chr1_2:10397541-10397560 Msa0055430:intron 35.0%
TCAAATCTCACTTCAACTGT+TGG - chr1_2:10397695-10397714 None:intergenic 35.0%
ACAAAGAAGTTGAGCAATGA+AGG - chr1_2:10397764-10397783 None:intergenic 35.0%
TAAGGGTAGATAGCAGAAAA+TGG - chr1_2:10397816-10397835 None:intergenic 35.0%
TGTAATGGTTTCTTTGGACT+TGG - chr1_2:10397907-10397926 None:intergenic 35.0%
CAGAACAAGAAAAATCTAGC+TGG - chr1_2:10398030-10398049 None:intergenic 35.0%
! AAGGTAAGGAATCCGAATTT+TGG + chr1_2:10398150-10398169 Msa0055430:intron 35.0%
! GACCGACACTTTATGATTTT+AGG - chr1_2:10398340-10398359 None:intergenic 35.0%
GTATTAGTGTGAGATTAACG+TGG - chr1_2:10398433-10398452 None:intergenic 35.0%
AAAAACTTAGTGATGGTTGG+TGG - chr1_2:10398455-10398474 None:intergenic 35.0%
! CAGACTAATTTGCCAATAGT+TGG + chr1_2:10398494-10398513 Msa0055430:intron 35.0%
TGTCACTAATTGCAATTGTG+CGG - chr1_2:10398522-10398541 None:intergenic 35.0%
! TTTTACAGGGAAATTAGTCC+TGG + chr1_2:10398566-10398585 Msa0055430:intron 35.0%
TTGTGTCAATCTCACATCAA+TGG - chr1_2:10398599-10398618 None:intergenic 35.0%
AAACGAGTGAATAGGCAAAT+TGG - chr1_2:10398735-10398754 None:intergenic 35.0%
GTGATGAAACTTCAGAAATC+TGG + chr1_2:10398779-10398798 Msa0055430:intron 35.0%
AGAGTAACATACAATGGGAA+AGG + chr1_2:10398803-10398822 Msa0055430:CDS 35.0%
TGAACTACTAAGAAGAGAGA+AGG + chr1_2:10399085-10399104 Msa0055430:CDS 35.0%
!!! AATGTTACAGATTTTGGGAC+TGG + chr1_2:10399393-10399412 Msa0055430:intron 35.0%
! GGAAATATGTGCTGACATTA+TGG + chr1_2:10399414-10399433 Msa0055430:CDS 35.0%
! ATATGTGCTGACATTATGGT+AGG + chr1_2:10399418-10399437 Msa0055430:CDS 35.0%
!! GGAATGATAAGAGGTATTTC+AGG + chr1_2:10399445-10399464 Msa0055430:CDS 35.0%
!! ATGATAAGAGGTATTTCAGG+AGG + chr1_2:10399448-10399467 Msa0055430:CDS 35.0%
!! TGATAAGAGGTATTTCAGGA+GGG + chr1_2:10399449-10399468 Msa0055430:CDS 35.0%
!! ACCTATAAGGGTATTGTTCA+TGG + chr1_2:10399805-10399824 Msa0055430:CDS 35.0%
TCCATGAACAATACCCTTAT+AGG - chr1_2:10399809-10399828 None:intergenic 35.0%
GTCTGATTGAGCTGATTATT+TGG - chr1_2:10399868-10399887 None:intergenic 35.0%
!! AATTCATAAGTTTCTGGTGC+TGG - chr1_2:10399938-10399957 None:intergenic 35.0%
GATATCATATTGCTCACAGA+TGG + chr1_2:10399965-10399984 Msa0055430:CDS 35.0%
! AACTCGAGTACATTTTCTCT+TGG - chr1_2:10400010-10400029 None:intergenic 35.0%
TTCAAGTGTCCTGAAAGAAA+AGG + chr1_2:10400046-10400065 Msa0055430:CDS 35.0%
TTATGCAATAGGTGACATCA+AGG + chr1_2:10400179-10400198 Msa0055430:intron 35.0%
TGACATCAAGGAAAGATCAA+TGG + chr1_2:10400191-10400210 Msa0055430:CDS 35.0%
GGAAAGATCAATGGCAATAT+TGG + chr1_2:10400200-10400219 Msa0055430:CDS 35.0%
GCCTTTCAGATATTTCACAT+AGG + chr1_2:10400274-10400293 Msa0055430:CDS 35.0%
!!! TGGCATTTTGACTTGTCAAA+AGG - chr1_2:10400328-10400347 None:intergenic 35.0%
GTCTTGACCACAAAGAAATA+CGG + chr1_2:10400355-10400374 Msa0055430:CDS 35.0%
GTTAACACCGTATTTCTTTG+TGG - chr1_2:10400365-10400384 None:intergenic 35.0%
! GAAATACGGTGTTAACAAGA+AGG + chr1_2:10400369-10400388 Msa0055430:CDS 35.0%
! CTTGAGTGACTTTGAAAATG+TGG - chr1_2:10400453-10400472 None:intergenic 35.0%
TAAGCTGAAAAGGATGAACA+TGG - chr1_2:10400532-10400551 None:intergenic 35.0%
!! AGCACTATTTTTCACAGTCA+CGG + chr1_2:10400637-10400656 Msa0055430:CDS 35.0%
TCTCTTTGCTTGTAAAAGAC+AGG - chr1_2:10400713-10400732 None:intergenic 35.0%
ATCTTCTCTTCTATCCTTCA+TGG + chr1_2:10400732-10400751 Msa0055430:CDS 35.0%
TCTTCTCTTCTATCCTTCAT+GGG + chr1_2:10400733-10400752 Msa0055430:CDS 35.0%
!!! GGTATTTTTAGAATCCATGG+TGG - chr1_2:10400770-10400789 None:intergenic 35.0%
CTATCATAGAAGCTGTCATA+TGG + chr1_2:10400795-10400814 Msa0055430:CDS 35.0%
! GCTATGATCCAAGTTTTCTA+AGG + chr1_2:10400843-10400862 Msa0055430:CDS 35.0%
ACTTCTTGCCTTAGAAAACT+TGG - chr1_2:10400854-10400873 None:intergenic 35.0%
GGTTAATCAACAGAATTACC+AGG - chr1_2:10400989-10401008 None:intergenic 35.0%
AGATGGCTTCTTCACTATTT+CGG + chr1_2:10401009-10401028 Msa0055430:intron 35.0%
TTCTTCACTATTTCGGTTGA+TGG + chr1_2:10401016-10401035 Msa0055430:CDS 35.0%
! TTATAGTTGCAAGCACTGTT+GGG + chr1_2:10401057-10401076 Msa0055430:CDS 35.0%
CAAAACTCCCAATGTTTCAT+TGG - chr1_2:10401685-10401704 None:intergenic 35.0%
! CAATGAAACATTGGGAGTTT+TGG + chr1_2:10401683-10401702 Msa0055430:CDS 35.0%
!!! GTTTTGGTAATGAAAACTCG+CGG + chr1_2:10401699-10401718 Msa0055430:CDS 35.0%
!!! GTTTTTTCCCACAAGCTTAT+TGG + chr1_2:10401721-10401740 Msa0055430:CDS 35.0%
TCCAATACCAATAAGCTTGT+GGG - chr1_2:10401731-10401750 None:intergenic 35.0%
ATCCAATACCAATAAGCTTG+TGG - chr1_2:10401732-10401751 None:intergenic 35.0%
! CAAGCTTATTGGTATTGGAT+TGG + chr1_2:10401732-10401751 Msa0055430:CDS 35.0%
!! TATTGGTATTGGATTGGTGT+AGG + chr1_2:10401738-10401757 Msa0055430:CDS 35.0%
GAAACAAAGATAGCAGAAGA+AGG + chr1_2:10402111-10402130 Msa0055430:intron 35.0%
AAGGATAAAGCTAGCATAAG+TGG + chr1_2:10402171-10402190 Msa0055430:CDS 35.0%
ATAAAGCTAGCATAAGTGGA+AGG + chr1_2:10402175-10402194 Msa0055430:CDS 35.0%
! AGAAGTATGTAAAGTACCTG+AGG - chr1_2:10402270-10402289 None:intergenic 35.0%
!!! GAACTTTTGAAGGGTATCAA+TGG + chr1_2:10402470-10402489 Msa0055430:CDS 35.0%
ATCCATTAGAGTAGTCTTTC+CGG - chr1_2:10402543-10402562 None:intergenic 35.0%
!!! ACTCTAATGGATGTTTTAGC+TGG + chr1_2:10402551-10402570 Msa0055430:CDS 35.0%
!!! TAATGGATGTTTTAGCTGGA+AGG + chr1_2:10402555-10402574 Msa0055430:CDS 35.0%
GATGGAAACATCACAATATC+TGG + chr1_2:10402596-10402615 Msa0055430:CDS 35.0%
AAAACATTTGCTCGCATATC+GGG + chr1_2:10402635-10402654 Msa0055430:CDS 35.0%
GATTCATAAACGGTGACATT+AGG - chr1_2:10402689-10402708 None:intergenic 35.0%
AGTTGATCAAGCTACTAGAA+AGG + chr1_2:10402745-10402764 Msa0055430:CDS 35.0%
AGATGTAATATAGTACCCTC+CGG + chr1_2:10402832-10402851 Msa0055430:intron 35.0%
TTCTTATAAATAGGACCGGA+GGG - chr1_2:10402967-10402986 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG - chr1_2:10402966-10402985 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG + chr1_2:10402966-10402985 Msa0055430:intron 35.0%
TTCTTATAAATAGGACCGGA+GGG + chr1_2:10402967-10402986 Msa0055430:intron 35.0%
GATGATGCAGATGTTTATTG+AGG + chr1_2:10403220-10403239 Msa0055430:intron 35.0%
!! TCATTAAGAGAAGCACTTGT+TGG + chr1_2:10403269-10403288 Msa0055430:CDS 35.0%
CAATTGTAATGAGAACAGTG+AGG + chr1_2:10403420-10403439 Msa0055430:CDS 35.0%
ATATGTCAATACTTGGCTGA+TGG - chr1_2:10403484-10403503 None:intergenic 35.0%
CATATTTGATGCCTTTGATG+AGG + chr1_2:10403499-10403518 Msa0055430:CDS 35.0%
AACAAATCATACCGCCAATA+AGG + chr1_2:10403523-10403542 Msa0055430:intron 35.0%
ACAAAATTCCACCTTATTGG+CGG - chr1_2:10403537-10403556 None:intergenic 35.0%
CTTCTACTTATGAAATTGGG+AGG + chr1_2:10403618-10403637 Msa0055430:CDS 35.0%
AATGAATCAAATGAGCGCAA+TGG - chr1_2:10403674-10403693 None:intergenic 35.0%
TGGAATATTCACATAGTGCA+TGG + chr1_2:10403751-10403770 Msa0055430:intron 35.0%
ACATAGTGCATGGATACTAT+AGG + chr1_2:10403761-10403780 Msa0055430:intron 35.0%
TGGATACTATAGGCTATTGA+AGG + chr1_2:10403771-10403790 Msa0055430:intron 35.0%
ATGGTTATAATCCTGCAACA+TGG + chr1_2:10403811-10403830 Msa0055430:CDS 35.0%
AGGATCAGAAGCAAATCTTA+AGG + chr1_2:10403854-10403873 Msa0055430:CDS 35.0%
GAGAAACAAACAATTGATCC+AGG + chr1_2:10404027-10404046 Msa0055430:CDS 35.0%
TATACCTCCTCAAGATTCAA+AGG + chr1_2:10404057-10404076 Msa0055430:CDS 35.0%
! CACAATGTAAAGCTTGCTTA+TGG + chr1_2:10404119-10404138 Msa0055430:CDS 35.0%
! GCAAGATCTTTTCAATGCAA+TGG + chr1_2:10404345-10404364 Msa0055430:CDS 35.0%
TACAATGATCCCATATACCA+GGG - chr1_2:10404903-10404922 None:intergenic 35.0%
ATACAATGATCCCATATACC+AGG - chr1_2:10404904-10404923 None:intergenic 35.0%
GATCATTGTATATGCCATGA+TGG + chr1_2:10404913-10404932 Msa0055430:CDS 35.0%
! GGACAGCATCAAAATTCTTT+TGG + chr1_2:10404945-10404964 Msa0055430:CDS 35.0%
TTCTTGTACTACACCTTCTA+TGG + chr1_2:10404992-10405011 Msa0055430:CDS 35.0%
! GCAATATGGAATCTTTTCTC+AGG + chr1_2:10405079-10405098 Msa0055430:CDS 35.0%
AAATCAATGGAGGGATACAT+AGG - chr1_2:10405294-10405313 None:intergenic 35.0%
! TATGTATCCCTCCATTGATT+TGG + chr1_2:10405293-10405312 Msa0055430:intron 35.0%
GTATTTGGATTGTCTATGGT+CGG - chr1_2:10405496-10405515 None:intergenic 35.0%
GGATGTATTTGGATTGTCTA+TGG - chr1_2:10405500-10405519 None:intergenic 35.0%
TCCAACAACTAAGATTTGAC+GGG - chr1_2:10405534-10405553 None:intergenic 35.0%
GTCCAACAACTAAGATTTGA+CGG - chr1_2:10405535-10405554 None:intergenic 35.0%
GACAGAAAATACCAATATGG+TGG + chr1_2:10405694-10405713 Msa0055430:intron 35.0%
! AAATACCAATATGGTGGAAG+TGG + chr1_2:10405700-10405719 Msa0055430:CDS 35.0%
AACATGCACAAACTTGAGAA+TGG + chr1_2:10405786-10405805 Msa0055430:CDS 35.0%
ACAAACTTGAGAATGGTCAA+AGG + chr1_2:10405793-10405812 Msa0055430:CDS 35.0%
CAAACTTGAGAATGGTCAAA+GGG + chr1_2:10405794-10405813 Msa0055430:CDS 35.0%
AAAGGGTTGAAGAATTTGTG+AGG + chr1_2:10405811-10405830 Msa0055430:CDS 35.0%
!!! GGTTTTAAACATGACTTCCT+AGG + chr1_2:10405843-10405862 Msa0055430:CDS 35.0%
GTTGAATGCTTTGATACCAA+AGG - chr1_2:10405922-10405941 None:intergenic 35.0%
ATTCTAGGTTGTAATGTCCT+TGG + chr1_2:10406011-10406030 Msa0055430:intron 35.0%
! ACTTGCTAACTTTGATACCA+AGG - chr1_2:10406031-10406050 None:intergenic 35.0%
GCAAAGTGTATTCCTACAAA+TGG + chr1_2:10406079-10406098 Msa0055430:intron 35.0%
TATTTATTCATGCTACCACC+TGG + chr1_2:10406131-10406150 Msa0055430:intron 35.0%
!!! ACTCTTTTGTTTTACATGCC+AGG - chr1_2:10406152-10406171 None:intergenic 35.0%
AAGGATAATTCACATACGTG+TGG - chr1_2:10406894-10406913 None:intergenic 35.0%
TCAAAACCAGATTCCTACAA+AGG - chr1_2:10406913-10406932 None:intergenic 35.0%
TATCATTACACACATGAAGG+AGG - chr1_2:10406986-10407005 None:intergenic 35.0%
GCTTGGATTAACTGAGAGAA+AGG + chr1_2:10396935-10396954 Msa0055430:CDS 40.0%
ATTATGGTTGTAGTCGCAGT+TGG + chr1_2:10397086-10397105 Msa0055430:intron 40.0%
!! TGTTTCTGAAACCGCGATTA+AGG - chr1_2:10397223-10397242 None:intergenic 40.0%
GTCGAAGCACAAGTTTATGT+TGG + chr1_2:10397725-10397744 Msa0055430:CDS 40.0%
GAAGCACAAGTTTATGTTGG+AGG + chr1_2:10397728-10397747 Msa0055430:CDS 40.0%
GTGGAATCATAAAGCCTCAA+AGG + chr1_2:10397944-10397963 Msa0055430:CDS 40.0%
! TGGAAAGACCACTTTGCTTT+TGG + chr1_2:10398098-10398117 Msa0055430:CDS 40.0%
!! TGGTGTCATTAATGTTGTGG+AGG + chr1_2:10398170-10398189 Msa0055430:intron 40.0%
TAGTGTGAGATTAACGTGGA+GGG - chr1_2:10398429-10398448 None:intergenic 40.0%
TTAGTGTGAGATTAACGTGG+AGG - chr1_2:10398430-10398449 None:intergenic 40.0%
GTCACTAATTGCAATTGTGC+GGG - chr1_2:10398521-10398540 None:intergenic 40.0%
TCTGGGAGAGTAACATACAA+TGG + chr1_2:10398797-10398816 Msa0055430:CDS 40.0%
CTGGGAGAGTAACATACAAT+GGG + chr1_2:10398798-10398817 Msa0055430:CDS 40.0%
CTTTCTCAGCAAGATGTCAA+GGG + chr1_2:10398915-10398934 Msa0055430:CDS 40.0%
TTTCTCAGCAAGATGTCAAG+GGG + chr1_2:10398916-10398935 Msa0055430:CDS 40.0%
TTCATATAGGCATCAACGTC+AGG - chr1_2:10399131-10399150 None:intergenic 40.0%
TGACGTTGATGCCTATATGA+AGG + chr1_2:10399130-10399149 Msa0055430:CDS 40.0%
GGTAACCGACTATATTCTCA+AGG + chr1_2:10399279-10399298 Msa0055430:CDS 40.0%
GTAGGAGATGGAATGATAAG+AGG + chr1_2:10399436-10399455 Msa0055430:CDS 40.0%
CAGAAAAAGAGAGTCACAAC+AGG + chr1_2:10399472-10399491 Msa0055430:CDS 40.0%
AAAATGTAAAGGGGAGATGC+TGG + chr1_2:10399778-10399797 Msa0055430:intron 40.0%
GTGCAGTTCCATTCAGAATA+TGG - chr1_2:10399898-10399917 None:intergenic 40.0%
GATGGGCAAATTGTGTATCA+AGG + chr1_2:10399983-10400002 Msa0055430:CDS 40.0%
! TCAGCAACTCCTTTTCTTTC+AGG - chr1_2:10400058-10400077 None:intergenic 40.0%
TTCTTTGTGGTCAAGACACT+AGG - chr1_2:10400352-10400371 None:intergenic 40.0%
TAACAAGAAGGAGCTTCTGA+AGG + chr1_2:10400381-10400400 Msa0055430:CDS 40.0%
GATGCATAAGGATACTGTAG+AGG + chr1_2:10400595-10400614 Msa0055430:CDS 40.0%
CATAAGGATACTGTAGAGGA+TGG + chr1_2:10400599-10400618 Msa0055430:CDS 40.0%
GCCATCACTTACTATGCTAT+TGG + chr1_2:10400821-10400840 Msa0055430:CDS 40.0%
GCCAATAGCATAGTAAGTGA+TGG - chr1_2:10400825-10400844 None:intergenic 40.0%
!!! CAGGCTTTTAAAACAGTACC+TGG + chr1_2:10400968-10400987 Msa0055430:intron 40.0%
GAAATAGTGAAGAAGCCATC+TGG - chr1_2:10401010-10401029 None:intergenic 40.0%
! GTTATAGTTGCAAGCACTGT+TGG + chr1_2:10401056-10401075 Msa0055430:CDS 40.0%
!!! CTTGTAGTTTTGGTTTTGGG+AGG + chr1_2:10401092-10401111 Msa0055430:CDS 40.0%
GGAGGATTTGTGATTTCAAG+AGG + chr1_2:10401110-10401129 Msa0055430:CDS 40.0%
AATGGTTTCTGTGGGGTTAT+TGG + chr1_2:10401475-10401494 Msa0055430:CDS 40.0%
GCATTCTGTCCATACATCAA+CGG - chr1_2:10401507-10401526 None:intergenic 40.0%
TCTTGGACATAGTTGGAGAA+AGG + chr1_2:10401545-10401564 Msa0055430:CDS 40.0%
TCCCACAAGCTTATTGGTAT+TGG + chr1_2:10401727-10401746 Msa0055430:CDS 40.0%
!! ATTGGTGTAGGAGCATTGAT+TGG + chr1_2:10401750-10401769 Msa0055430:CDS 40.0%
CTCACGGTTGAGATATTGTA+AGG - chr1_2:10401811-10401830 None:intergenic 40.0%
!! CCAGAGATTTTCTTTCGAGT+CGG - chr1_2:10401997-10402016 None:intergenic 40.0%
! AGATCGTTTTCTGCAAGAGT+TGG + chr1_2:10402147-10402166 Msa0055430:CDS 40.0%
!!! GTTTTCTGCAAGAGTTGGTA+AGG + chr1_2:10402152-10402171 Msa0055430:CDS 40.0%
TCATCAAAAGTGAGGGATAG+AGG - chr1_2:10402225-10402244 None:intergenic 40.0%
GAAAAACCAAGGAGTTTCTG+AGG + chr1_2:10402439-10402458 Msa0055430:CDS 40.0%
! GATCGTCTCGAACTTTTGAA+GGG + chr1_2:10402461-10402480 Msa0055430:CDS 40.0%
!!! GTTTTAGCTGGAAGGAAAAC+TGG + chr1_2:10402563-10402582 Msa0055430:CDS 40.0%
AAACGGTGACATTAGGTGAA+TGG - chr1_2:10402682-10402701 None:intergenic 40.0%
CTAGTAGCTTGATCAACTTC+AGG - chr1_2:10402743-10402762 None:intergenic 40.0%
ATGCAATCTGAGCAATCTTG+TGG - chr1_2:10402810-10402829 None:intergenic 40.0%
CATGAAATAAGTACTCCCTC+CGG - chr1_2:10402985-10403004 None:intergenic 40.0%
AAATCATACCGCCAATAAGG+TGG + chr1_2:10403526-10403545 Msa0055430:intron 40.0%
GGAGGTGAGCAAATATATTC+TGG + chr1_2:10403636-10403655 Msa0055430:CDS 40.0%
GGAGTTCCTAAGATCAAAGA+TGG + chr1_2:10403792-10403811 Msa0055430:CDS 40.0%
TAATCCTGCAACATGGATGT+TGG + chr1_2:10403818-10403837 Msa0055430:CDS 40.0%
ATGTTGGAAGTTACATCAGC+AGG + chr1_2:10403834-10403853 Msa0055430:CDS 40.0%
ACAGAAACTCGGAACTATAC+CGG + chr1_2:10403895-10403914 Msa0055430:CDS 40.0%
! GAGGAGGTATACTTAATTCC+TGG - chr1_2:10404048-10404067 None:intergenic 40.0%
AACTCCTTTGAATCTTGAGG+AGG - chr1_2:10404064-10404083 None:intergenic 40.0%
!! TTTGGAACATCGGCTTGAAA+AGG + chr1_2:10404233-10404252 Msa0055430:CDS 40.0%
GGAATTGTATTACAGGGGAA+AGG + chr1_2:10404321-10404340 Msa0055430:intron 40.0%
GTTCTCTCAACTGCTATTAC+AGG - chr1_2:10404427-10404446 None:intergenic 40.0%
CACAGGTAAAGTTCAATGCA+TGG + chr1_2:10404503-10404522 Msa0055430:intron 40.0%
AGTGAAGGAATCTCTACTGT+TGG - chr1_2:10404699-10404718 None:intergenic 40.0%
AACAAACATTCACGCAGTGA+AGG - chr1_2:10404714-10404733 None:intergenic 40.0%
!! GTTTGTTTTCCCTATCTGCA+CGG + chr1_2:10404727-10404746 Msa0055430:intron 40.0%
CATGGTCATCATACCATAGA+AGG - chr1_2:10405008-10405027 None:intergenic 40.0%
CTTCTATGGTATGATGACCA+TGG + chr1_2:10405006-10405025 Msa0055430:CDS 40.0%
ATAGAATGAGGAGGACAGTA+TGG - chr1_2:10405059-10405078 None:intergenic 40.0%
CCATATTGCATAGAATGAGG+AGG - chr1_2:10405068-10405087 None:intergenic 40.0%
CCTCCTCATTCTATGCAATA+TGG + chr1_2:10405065-10405084 Msa0055430:CDS 40.0%
GATACATAGGATCCAAGTCT+TGG - chr1_2:10405281-10405300 None:intergenic 40.0%
ACCGTCCAATCTTGATCAAA+TGG + chr1_2:10405435-10405454 Msa0055430:intron 40.0%
GCCATTTGATCAAGATTGGA+CGG - chr1_2:10405439-10405458 None:intergenic 40.0%
AGTGGCCATTTGATCAAGAT+TGG - chr1_2:10405443-10405462 None:intergenic 40.0%
TCCCGTCAAATCTTAGTTGT+TGG + chr1_2:10405530-10405549 Msa0055430:intron 40.0%
TAGAACCACTTCCACCATAT+TGG - chr1_2:10405708-10405727 None:intergenic 40.0%
! TATGGTGGAAGTGGTTCTAT+TGG + chr1_2:10405709-10405728 Msa0055430:CDS 40.0%
! ATGGTGGAAGTGGTTCTATT+GGG + chr1_2:10405710-10405729 Msa0055430:CDS 40.0%
TGCATGGACATTGTATGGAT+TGG + chr1_2:10405743-10405762 Msa0055430:CDS 40.0%
! GGATTGGTGACTTCTCAATA+TGG + chr1_2:10405759-10405778 Msa0055430:CDS 40.0%
TAAACATGACTTCCTAGGAG+TGG + chr1_2:10405848-10405867 Msa0055430:CDS 40.0%
CTCATATGCTAGGAATAGGA+AGG - chr1_2:10406054-10406073 None:intergenic 40.0%
CTTCCTATTCCTAGCATATG+AGG + chr1_2:10406052-10406071 Msa0055430:CDS 40.0%
CTTCCTCATATGCTAGGAAT+AGG - chr1_2:10406058-10406077 None:intergenic 40.0%
TTTGCACTTCCTCATATGCT+AGG - chr1_2:10406064-10406083 None:intergenic 40.0%
!!! CTTTTGTTTTACATGCCAGG+TGG - chr1_2:10406149-10406168 None:intergenic 40.0%
ATGCAATGTGGTAAAATGGG+TGG - chr1_2:10406708-10406727 None:intergenic 40.0%
ATCGTCGATATACCAATCCA+TGG + chr1_2:10406756-10406775 Msa0055430:intron 40.0%
TGCCAAGTAGAACCAAAATG+AGG + chr1_2:10406789-10406808 Msa0055430:intron 40.0%
!!! CTCCTCATTTTGGTTCTACT+TGG - chr1_2:10406794-10406813 None:intergenic 40.0%
ATGCTCAACTTTGTGTCAGT+GGG - chr1_2:10406857-10406876 None:intergenic 40.0%
AGAAGCCCTTTCATCTCATA+CGG + chr1_2:10406958-10406977 Msa0055430:CDS 40.0%
!!! CCTTTTTGGCTTTGATTCGA+TGG - chr1_2:10407014-10407033 None:intergenic 40.0%
CCATCGAATCAAAGCCAAAA+AGG + chr1_2:10407011-10407030 Msa0055430:CDS 40.0%
! TGAGGATAGTGCAACCTTTT+TGG - chr1_2:10407028-10407047 None:intergenic 40.0%
TGTTGCAGTCCAAATTGCAG+CGG + chr1_2:10397256-10397275 Msa0055430:intron 45.0%
TTGACAAGACCGCTGCAATT+TGG - chr1_2:10397268-10397287 None:intergenic 45.0%
!!! GACCACTTTGCTTTTGGCTT+TGG + chr1_2:10398104-10398123 Msa0055430:CDS 45.0%
TGCCAAAGCCAAAAGCAAAG+TGG - chr1_2:10398109-10398128 None:intergenic 45.0%
!!! ACTTTGCTTTTGGCTTTGGC+AGG + chr1_2:10398108-10398127 Msa0055430:CDS 45.0%
AGTGTGAGATTAACGTGGAG+GGG - chr1_2:10398428-10398447 None:intergenic 45.0%
AATTGTGCGGGACCAACTAT+TGG - chr1_2:10398509-10398528 None:intergenic 45.0%
GCTTTCTCAGCAAGATGTCA+AGG + chr1_2:10398914-10398933 Msa0055430:CDS 45.0%
CAAGGGGTTGGACACAATTA+TGG + chr1_2:10398932-10398951 Msa0055430:CDS 45.0%
GCTGACATTATGGTAGGAGA+TGG + chr1_2:10399424-10399443 Msa0055430:CDS 45.0%
! AGATGCTGGTTGGACCTATA+AGG + chr1_2:10399792-10399811 Msa0055430:CDS 45.0%
! GATGCTGGTTGGACCTATAA+GGG + chr1_2:10399793-10399812 Msa0055430:CDS 45.0%
TTCATGGACGAGATATCGAC+TGG + chr1_2:10399821-10399840 Msa0055430:CDS 45.0%
TTGTGGTCAAGACACTAGGA+TGG - chr1_2:10400348-10400367 None:intergenic 45.0%
AAGGATACTGTAGAGGATGG+AGG + chr1_2:10400602-10400621 Msa0055430:CDS 45.0%
GTCACGGTAGCAATGTTCAA+TGG + chr1_2:10400653-10400672 Msa0055430:CDS 45.0%
GGAAGAGAATAAGCCCATGA+AGG - chr1_2:10400749-10400768 None:intergenic 45.0%
!!! ACATCTCTGGTTCTTTTGGC+AGG + chr1_2:10400949-10400968 Msa0055430:intron 45.0%
!! TTTCGGTTGATGGCAGCATT+AGG + chr1_2:10401026-10401045 Msa0055430:CDS 45.0%
!! GTTGATGGCAGCATTAGGAA+GGG + chr1_2:10401031-10401050 Msa0055430:CDS 45.0%
ACGTGCACAAATGGTTTCTG+TGG + chr1_2:10401466-10401485 Msa0055430:CDS 45.0%
CGTGCACAAATGGTTTCTGT+GGG + chr1_2:10401467-10401486 Msa0055430:CDS 45.0%
GTGCACAAATGGTTTCTGTG+GGG + chr1_2:10401468-10401487 Msa0055430:CDS 45.0%
TGCATCTGCAGCATTCAGAA+AGG + chr1_2:10401900-10401919 Msa0055430:intron 45.0%
GCATTCAGAAAGGATCAAGC+AGG + chr1_2:10401910-10401929 Msa0055430:intron 45.0%
! CCGACTCGAAAGAAAATCTC+TGG + chr1_2:10401994-10402013 Msa0055430:CDS 45.0%
CTTGCAGAAAACGATCTCGA+TGG - chr1_2:10402144-10402163 None:intergenic 45.0%
AAGCTAGCATAAGTGGAAGG+AGG + chr1_2:10402178-10402197 Msa0055430:CDS 45.0%
AGCTAGCATAAGTGGAAGGA+GGG + chr1_2:10402179-10402198 Msa0055430:CDS 45.0%
GTGAGGGATAGAGGTTGAAA+AGG - chr1_2:10402216-10402235 None:intergenic 45.0%
! GGATCGTCTCGAACTTTTGA+AGG + chr1_2:10402460-10402479 Msa0055430:CDS 45.0%
ATCAAAGCAGTCAGTACTCC+AGG - chr1_2:10402506-10402525 None:intergenic 45.0%
!! TGGAGTACTGACTGCTTTGA+TGG + chr1_2:10402505-10402524 Msa0055430:CDS 45.0%
!! GGAGTACTGACTGCTTTGAT+GGG + chr1_2:10402506-10402525 Msa0055430:CDS 45.0%
! ACTGCTTTGATGGGTGTAAG+TGG + chr1_2:10402515-10402534 Msa0055430:CDS 45.0%
TGCCGGAAAGACTACTCTAA+TGG + chr1_2:10402538-10402557 Msa0055430:CDS 45.0%
TTAGCTGGAAGGAAAACTGG+TGG + chr1_2:10402566-10402585 Msa0055430:CDS 45.0%
GTAGCTTGATCAACTTCAGG+TGG - chr1_2:10402740-10402759 None:intergenic 45.0%
! CGTTAGTCTCTTGCGTTGTT+CGG - chr1_2:10403321-10403340 None:intergenic 45.0%
GAATCAAATGAGCGCAATGG+CGG - chr1_2:10403671-10403690 None:intergenic 45.0%
ACTTCCAACATCCATGTTGC+AGG - chr1_2:10403825-10403844 None:intergenic 45.0%
TTCTACAGAGAAAGAGCTGC+TGG + chr1_2:10404451-10404470 Msa0055430:CDS 45.0%
! TTTACCTGTGCTGCTGCATA+AGG - chr1_2:10404493-10404512 None:intergenic 45.0%
AGGTCAAACAGAGTCGTTGA+AGG - chr1_2:10404756-10404775 None:intergenic 45.0%
TATAGAGCTACCCCACATCT+TGG + chr1_2:10404871-10404890 Msa0055430:CDS 45.0%
TTGGTTCAGACCCTGGTATA+TGG + chr1_2:10404890-10404909 Msa0055430:CDS 45.0%
TGGTTCAGACCCTGGTATAT+GGG + chr1_2:10404891-10404910 Msa0055430:CDS 45.0%
! ATGCCATGATGGGATTTGAG+TGG + chr1_2:10404924-10404943 Msa0055430:CDS 45.0%
TGTCCACTCAAATCCCATCA+TGG - chr1_2:10404930-10404949 None:intergenic 45.0%
ACAGTATGGCAGCAACATGT+GGG - chr1_2:10405045-10405064 None:intergenic 45.0%
AGGCAGTCCAAATCAATGGA+GGG - chr1_2:10405303-10405322 None:intergenic 45.0%
TCACGCAGTTATCACATCAG+TGG - chr1_2:10405461-10405480 None:intergenic 45.0%
AGAGGATGGAGGGATGTATT+TGG - chr1_2:10405511-10405530 None:intergenic 45.0%
TAAGATTTGACGGGAGAGGA+TGG - chr1_2:10405525-10405544 None:intergenic 45.0%
CAACTAAGATTTGACGGGAG+AGG - chr1_2:10405529-10405548 None:intergenic 45.0%
! TCCAACGACTCAGATTTTGC+AGG + chr1_2:10405598-10405617 Msa0055430:intron 45.0%
TCCTGCAAAATCTGAGTCGT+TGG - chr1_2:10405602-10405621 None:intergenic 45.0%
! AACGACTCAGATTTTGCAGG+AGG + chr1_2:10405601-10405620 Msa0055430:intron 45.0%
! ACGACTCAGATTTTGCAGGA+GGG + chr1_2:10405602-10405621 Msa0055430:intron 45.0%
ATTGGGTTTGTCCTGTTGCA+TGG + chr1_2:10405727-10405746 Msa0055430:CDS 45.0%
CCATACAATGTCCATGCAAC+AGG - chr1_2:10405741-10405760 None:intergenic 45.0%
CCTGTTGCATGGACATTGTA+TGG + chr1_2:10405738-10405757 Msa0055430:CDS 45.0%
CAACAATTGCAACCACTCCT+AGG - chr1_2:10405863-10405882 None:intergenic 45.0%
AGGAGTGGTTGCAATTGTTG+TGG + chr1_2:10405863-10405882 Msa0055430:CDS 45.0%
!! CTTTCTCTCCTTTTGGTGAC+CGG - chr1_2:10406558-10406577 None:intergenic 45.0%
CAACTTCTTCAGCCATGGAT+TGG - chr1_2:10406771-10406790 None:intergenic 45.0%
CATGCTCAACTTTGTGTCAG+TGG - chr1_2:10406858-10406877 None:intergenic 45.0%
AGGAGCCGTATGAGATGAAA+GGG - chr1_2:10406966-10406985 None:intergenic 45.0%
!! TTATAAATAATTAAAGATAA+GGG - chr1_2:10397833-10397852 None:intergenic 5.0%
!! TTTATAAATAATTAAAGATA+AGG - chr1_2:10397834-10397853 None:intergenic 5.0%
!!! TGATTTTTATTTATTTTTTT+TGG + chr1_2:10399752-10399771 Msa0055430:intron 5.0%
!!! ACATTACTTTTGGGGCCACC+AGG + chr1_2:10398072-10398091 Msa0055430:CDS 50.0%
AAAGTGGTCTTTCCAGAGCC+TGG - chr1_2:10398093-10398112 None:intergenic 50.0%
CACATCAATGGCAGCATACC+AGG - chr1_2:10398587-10398606 None:intergenic 50.0%
TCAGCAAGATGTCAAGGGGT+TGG + chr1_2:10398920-10398939 Msa0055430:CDS 50.0%
TAGGCATCAACGTCAGGATC+TGG - chr1_2:10399125-10399144 None:intergenic 50.0%
CTGGCGTTGTTTACTCATGC+CGG - chr1_2:10399515-10399534 None:intergenic 50.0%
TGTAAAGGGGAGATGCTGGT+TGG + chr1_2:10399782-10399801 Msa0055430:intron 50.0%
! GGACGAGATATCGACTGGTT+TGG + chr1_2:10399826-10399845 Msa0055430:CDS 50.0%
AGAGGATGGAGGAGCTTACA+TGG + chr1_2:10400613-10400632 Msa0055430:CDS 50.0%
GAGGATGGAGGAGCTTACAT+GGG + chr1_2:10400614-10400633 Msa0055430:CDS 50.0%
GGGCTTATTCTCTTCCACCA+TGG + chr1_2:10400753-10400772 Msa0055430:CDS 50.0%
!! GGTTGATGGCAGCATTAGGA+AGG + chr1_2:10401030-10401049 Msa0055430:CDS 50.0%
CATCAGAGGACGTGCACAAA+TGG + chr1_2:10401457-10401476 Msa0055430:intron 50.0%
TGGTCGTCACCGTTGATGTA+TGG + chr1_2:10401495-10401514 Msa0055430:CDS 50.0%
GGATCAAGCAGGTCTATCTG+AGG + chr1_2:10401921-10401940 Msa0055430:CDS 50.0%
TCAAGCAGGTCTATCTGAGG+AGG + chr1_2:10401924-10401943 Msa0055430:CDS 50.0%
GCTAGCATAAGTGGAAGGAG+GGG + chr1_2:10402180-10402199 Msa0055430:CDS 50.0%
CATAAGTGGAAGGAGGGGAA+TGG + chr1_2:10402185-10402204 Msa0055430:CDS 50.0%
ATACGCTGTAGACATGCCTC+AGG + chr1_2:10402251-10402270 Msa0055430:CDS 50.0%
GACGATCCTCAGAAACTCCT+TGG - chr1_2:10402448-10402467 None:intergenic 50.0%
! AGGGTATCAATGGCGCCTTT+AGG + chr1_2:10402480-10402499 Msa0055430:CDS 50.0%
AGTCAGTACTCCAGGCCTAA+AGG - chr1_2:10402498-10402517 None:intergenic 50.0%
! TTGATGGGTGTAAGTGGTGC+CGG + chr1_2:10402521-10402540 Msa0055430:CDS 50.0%
! GAAGCACTTGTTGGATTGCC+AGG + chr1_2:10403278-10403297 Msa0055430:CDS 50.0%
TTCATGGATGAGCCAACCTC+TGG + chr1_2:10403377-10403396 Msa0055430:CDS 50.0%
TTGCAGCTGCTCTAGCATCA+AGG - chr1_2:10403403-10403422 None:intergenic 50.0%
CACAGTTCGTCCTGTGTCAA+CGG - chr1_2:10403450-10403469 None:intergenic 50.0%
TTTGCCTTATGCAGCAGCAC+AGG + chr1_2:10404486-10404505 Msa0055430:CDS 50.0%
TGAAGGACTCCGTGCAGATA+GGG - chr1_2:10404739-10404758 None:intergenic 50.0%
TTGAAGGACTCCGTGCAGAT+AGG - chr1_2:10404740-10404759 None:intergenic 50.0%
AGGGTCTGAACCAAGATGTG+GGG - chr1_2:10404884-10404903 None:intergenic 50.0%
CAGGGTCTGAACCAAGATGT+GGG - chr1_2:10404885-10404904 None:intergenic 50.0%
!! AACATGTGGGTTGGGAGTGA+TGG - chr1_2:10405032-10405051 None:intergenic 50.0%
ATGGCAGCAACATGTGGGTT+GGG - chr1_2:10405040-10405059 None:intergenic 50.0%
TATGGCAGCAACATGTGGGT+TGG - chr1_2:10405041-10405060 None:intergenic 50.0%
GACAGTATGGCAGCAACATG+TGG - chr1_2:10405046-10405065 None:intergenic 50.0%
CAGGCAGTCCAAATCAATGG+AGG - chr1_2:10405304-10405323 None:intergenic 50.0%
CTGCAGGCAGTCCAAATCAA+TGG - chr1_2:10405307-10405326 None:intergenic 50.0%
!! CATTGATTTGGACTGCCTGC+AGG + chr1_2:10405305-10405324 Msa0055430:intron 50.0%
TGATTATGACTGCAGCCTGC+AGG - chr1_2:10405323-10405342 None:intergenic 50.0%
ATTTGACGGGAGAGGATGGA+GGG - chr1_2:10405521-10405540 None:intergenic 50.0%
! CGACTCAGATTTTGCAGGAG+GGG + chr1_2:10405603-10405622 Msa0055430:intron 50.0%
! ATTTTGCAGGAGGGGTGGAA+GGG + chr1_2:10405611-10405630 Msa0055430:intron 50.0%
! TTTTGCCTCCGGTCACCAAA+AGG + chr1_2:10406547-10406566 Msa0055430:intron 50.0%
CTTGGCAACTTCTTCAGCCA+TGG - chr1_2:10406776-10406795 None:intergenic 50.0%
! TGGGCGTGGTTTGGAGAAAT+CGG - chr1_2:10406838-10406857 None:intergenic 50.0%
GAGGAGCCGTATGAGATGAA+AGG - chr1_2:10406967-10406986 None:intergenic 50.0%
GTGAGATTAACGTGGAGGGG+CGG - chr1_2:10398425-10398444 None:intergenic 55.0%
ATGCAGGCAGCAGCACTAGA+AGG + chr1_2:10399241-10399260 Msa0055430:intron 55.0%
AGCAGCACTAGAAGGACAGG+AGG + chr1_2:10399249-10399268 Msa0055430:CDS 55.0%
AGAAGGACAGGAGGCAAGTG+TGG + chr1_2:10399258-10399277 Msa0055430:CDS 55.0%
ATCAATGGCGCCTTTAGGCC+TGG + chr1_2:10402485-10402504 Msa0055430:CDS 55.0%
GTTGAAAGTCCAGTCTCGCC+TGG - chr1_2:10403299-10403318 None:intergenic 55.0%
CTAGCATCAAGGCCAGAGGT+TGG - chr1_2:10403392-10403411 None:intergenic 55.0%
TGCTCTAGCATCAAGGCCAG+AGG - chr1_2:10403396-10403415 None:intergenic 55.0%
GTGAGGAACACCGTTGACAC+AGG + chr1_2:10403437-10403456 Msa0055430:CDS 55.0%
CGTTGACACAGGACGAACTG+TGG + chr1_2:10403448-10403467 Msa0055430:CDS 55.0%
CCAGGGTCTGAACCAAGATG+TGG - chr1_2:10404886-10404905 None:intergenic 55.0%
CCACATCTTGGTTCAGACCC+TGG + chr1_2:10404883-10404902 Msa0055430:CDS 55.0%
GATTTGACGGGAGAGGATGG+AGG - chr1_2:10405522-10405541 None:intergenic 55.0%
! CTCAGATTTTGCAGGAGGGG+TGG + chr1_2:10405606-10405625 Msa0055430:intron 55.0%
! GATTTTGCAGGAGGGGTGGA+AGG + chr1_2:10405610-10405629 Msa0055430:intron 55.0%
!! TCTCTCCTTTTGGTGACCGG+AGG - chr1_2:10406555-10406574 None:intergenic 55.0%
! GCGTGGTTTGGAGAAATCGG+TGG - chr1_2:10406835-10406854 None:intergenic 55.0%
TTGTGTCAGTGGGCGTGGTT+TGG - chr1_2:10406847-10406866 None:intergenic 55.0%
CAACTTTGTGTCAGTGGGCG+TGG - chr1_2:10406852-10406871 None:intergenic 55.0%
GTGGTCTTTCCAGAGCCTGG+TGG - chr1_2:10398090-10398109 None:intergenic 60.0%
GGCAGCAGCACTAGAAGGAC+AGG + chr1_2:10399246-10399265 Msa0055430:intron 60.0%
GTTGGATTGCCAGGCGAGAC+TGG + chr1_2:10403287-10403306 Msa0055430:CDS 60.0%
TGAGCGCAATGGCGGCCTAA+TGG - chr1_2:10403663-10403682 None:intergenic 60.0%
! TGGGTTGGGAGTGATGGCCA+TGG - chr1_2:10405026-10405045 None:intergenic 60.0%
!!! CTTTTGGGGCCACCAGGCTC+TGG + chr1_2:10398078-10398097 Msa0055430:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 10396531 10407059 10396531 ID=Msa0055430;Name=Msa0055430
chr1_2 mRNA 10396531 10407059 10396531 ID=Msa0055430-mRNA-1;Parent=Msa0055430;Name=Msa0055430-mRNA-1;_AED=0.31;_eAED=0.31;_QI=124|0.88|0.81|0.96|0.96|0.92|27|0|1495
chr1_2 exon 10396531 10396575 10396531 ID=Msa0055430-mRNA-1:exon:3954;Parent=Msa0055430-mRNA-1
chr1_2 exon 10396635 10397036 10396635 ID=Msa0055430-mRNA-1:exon:3955;Parent=Msa0055430-mRNA-1
chr1_2 exon 10397676 10397796 10397676 ID=Msa0055430-mRNA-1:exon:3956;Parent=Msa0055430-mRNA-1
chr1_2 exon 10397877 10397965 10397877 ID=Msa0055430-mRNA-1:exon:3957;Parent=Msa0055430-mRNA-1
chr1_2 exon 10398068 10398152 10398068 ID=Msa0055430-mRNA-1:exon:3958;Parent=Msa0055430-mRNA-1
chr1_2 exon 10398794 10398953 10398794 ID=Msa0055430-mRNA-1:exon:3959;Parent=Msa0055430-mRNA-1
chr1_2 exon 10399075 10399151 10399075 ID=Msa0055430-mRNA-1:exon:3960;Parent=Msa0055430-mRNA-1
chr1_2 exon 10399247 10399300 10399247 ID=Msa0055430-mRNA-1:exon:3961;Parent=Msa0055430-mRNA-1
chr1_2 exon 10399403 10399493 10399403 ID=Msa0055430-mRNA-1:exon:3962;Parent=Msa0055430-mRNA-1
chr1_2 exon 10399789 10400090 10399789 ID=Msa0055430-mRNA-1:exon:3963;Parent=Msa0055430-mRNA-1
chr1_2 exon 10400190 10400471 10400190 ID=Msa0055430-mRNA-1:exon:3964;Parent=Msa0055430-mRNA-1
chr1_2 exon 10400548 10400871 10400548 ID=Msa0055430-mRNA-1:exon:3965;Parent=Msa0055430-mRNA-1
chr1_2 exon 10401011 10401131 10401011 ID=Msa0055430-mRNA-1:exon:3966;Parent=Msa0055430-mRNA-1
chr1_2 exon 10401463 10401566 10401463 ID=Msa0055430-mRNA-1:exon:3967;Parent=Msa0055430-mRNA-1
chr1_2 exon 10401669 10401825 10401669 ID=Msa0055430-mRNA-1:exon:3968;Parent=Msa0055430-mRNA-1
chr1_2 exon 10401911 10402015 10401911 ID=Msa0055430-mRNA-1:exon:3969;Parent=Msa0055430-mRNA-1
chr1_2 exon 10402112 10402272 10402112 ID=Msa0055430-mRNA-1:exon:3970;Parent=Msa0055430-mRNA-1
chr1_2 exon 10402434 10402766 10402434 ID=Msa0055430-mRNA-1:exon:3971;Parent=Msa0055430-mRNA-1
chr1_2 exon 10403230 10403520 10403230 ID=Msa0055430-mRNA-1:exon:3972;Parent=Msa0055430-mRNA-1
chr1_2 exon 10403618 10403701 10403618 ID=Msa0055430-mRNA-1:exon:3973;Parent=Msa0055430-mRNA-1
chr1_2 exon 10403783 10403916 10403783 ID=Msa0055430-mRNA-1:exon:3974;Parent=Msa0055430-mRNA-1
chr1_2 exon 10404027 10404254 10404027 ID=Msa0055430-mRNA-1:exon:3975;Parent=Msa0055430-mRNA-1
chr1_2 exon 10404336 10404507 10404336 ID=Msa0055430-mRNA-1:exon:3976;Parent=Msa0055430-mRNA-1
chr1_2 exon 10404866 10405120 10404866 ID=Msa0055430-mRNA-1:exon:3977;Parent=Msa0055430-mRNA-1
chr1_2 exon 10405699 10405924 10405699 ID=Msa0055430-mRNA-1:exon:3978;Parent=Msa0055430-mRNA-1
chr1_2 exon 10406018 10406085 10406018 ID=Msa0055430-mRNA-1:exon:3979;Parent=Msa0055430-mRNA-1
chr1_2 exon 10406919 10407059 10406919 ID=Msa0055430-mRNA-1:exon:3980;Parent=Msa0055430-mRNA-1
chr1_2 five_prime_UTR 10396531 10396575 10396531 ID=Msa0055430-mRNA-1:five_prime_utr;Parent=Msa0055430-mRNA-1
chr1_2 five_prime_UTR 10396635 10396713 10396635 ID=Msa0055430-mRNA-1:five_prime_utr;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10396714 10397036 10396714 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10397676 10397796 10397676 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10397877 10397965 10397877 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10398068 10398152 10398068 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10398794 10398953 10398794 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10399075 10399151 10399075 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10399247 10399300 10399247 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10399403 10399493 10399403 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10399789 10400090 10399789 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10400190 10400471 10400190 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10400548 10400871 10400548 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10401011 10401131 10401011 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10401463 10401566 10401463 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10401669 10401825 10401669 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10401911 10402015 10401911 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10402112 10402272 10402112 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10402434 10402766 10402434 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10403230 10403520 10403230 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10403618 10403701 10403618 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10403783 10403916 10403783 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10404027 10404254 10404027 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10404336 10404507 10404336 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10404866 10405120 10404866 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10405699 10405924 10405699 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10406018 10406085 10406018 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
chr1_2 CDS 10406919 10407059 10406919 ID=Msa0055430-mRNA-1:cds;Parent=Msa0055430-mRNA-1
Gene Sequence

>Msa0055430

ATGGAGAGCAATGAAGTATCAAGAGTTGATAGCTTAAGAAGAGCAAGTAGTTCTAACATATGGAGGAACAATAGCATGAATGTTTTCTCGACTTCTGAACGTGAAGACGATGAAGAAGCTCTTAAATGGGCTGCTATTGAGAGACTTCCTACATATCTAAGGATTAGAAGAAGTATAATCAATAATGAAGAAGGTGAAGGGAGAGAGATTGATATAAAAAAGCTTGGATTAACTGAGAGAAAGGTTTTACTAGAGAGACTTGTGAAAATTGCTGAAGAAGATAACGAAAAGTTCTTGTTGAAACTTAAGGAAAGAATTGAAAGAGTTGGACTTGATATTCCAACAGTTGAAGTGAGATTTGAGCATATAAATGTCGAAGCACAAGTTTATGTTGGAGGCAGAGCTTTACCTTCATTGCTCAACTTCTTTGTTAATGTGTTAGAGGGATTCTTAAATTATCTTCATATCATTCCAAGTCCAAAGAAACCATTACATATCCTTCAAAATGTTAGTGGAATCATAAAGCCTCAAAGAATGACATTACTTTTGGGGCCACCAGGCTCTGGAAAGACCACTTTGCTTTTGGCTTTGGCAGGAAAACTTGCTAAAGATTTAAAGAAATCTGGGAGAGTAACATACAATGGGAAAGGACTAGAAGAGTTTGTTCCACAAAGAACATCAGCTTATATAAGTCAATATGATAATCACATTGGAGAAATGACTGTGAGAGAAACATTAGCTTTCTCAGCAAGATGTCAAGGGGTTGGACACAATTATGATATGTTGACTGAACTACTAAGAAGAGAGAAGGAAGCAAAGATTAAACCAGATCCTGACGTTGATGCCTATATGAAGGCAGCAGCACTAGAAGGACAGGAGGCAAGTGTGGTAACCGACTATATTCTCAAGATTTTGGGACTGGAAATATGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATTTCAGGAGGGCAGAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCTATAAGGGTATTGTTCATGGACGAGATATCGACTGGTTTGGACAGTTCAACAACTTTCCAAATAATCAGCTCAATCAGACAATCAATCCATATTCTGAATGGAACTGCACTTGTGTCTTTGCTACAACCAGCACCAGAAACTTATGAATTATTTGATGATATCATATTGCTCACAGATGGGCAAATTGTGTATCAAGGTCCAAGAGAAAATGTACTCGAGTTTTTTGAATCAATGGGATTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGATTTCCTACAAGAAGTGACATCAAGGAAAGATCAATGGCAATATTGGGCAAATAAAGATGAACCTTATAGTTTTGTTACTGTTAAGGATTTTGCAGAAGCCTTTCAGATATTTCACATAGGTCAAAAACTTGGAGATGAGTTAGCCAATCCTTTTGACAAGTCAAAATGCCATCCTAGTGTCTTGACCACAAAGAAATACGGTGTTAACAAGAAGGAGCTTCTGAAGGCTTGTGCTAGCAGAGAATTTTTGCTTATGAAGCGAAATTCGTTTGTCCACATTTTCAAAGTCACTCAACTTATTTATTTAGCTATCATGACAACAACATTGTTTCTAAGAACTAAGATGCATAAGGATACTGTAGAGGATGGAGGAGCTTACATGGGAGCACTATTTTTCACAGTCACGGTAGCAATGTTCAATGGAATATCAGAACTAAATATGACACTTATGAAACTTCCTGTCTTTTACAAGCAAAGAGATCTTCTCTTCTATCCTTCATGGGCTTATTCTCTTCCACCATGGATTCTAAAAATACCAATAACTATCATAGAAGCTGTCATATGGGAAGCCATCACTTACTATGCTATTGGCTATGATCCAAGTTTTCTAAGGCAAGAAATGGCTTCTTCACTATTTCGGTTGATGGCAGCATTAGGAAGGGATGTTATAGTTGCAAGCACTGTTGGGTCATTTGCATTACTTGTAGTTTTGGTTTTGGGAGGATTTGTGATTTCAAGAGAGGACGTGCACAAATGGTTTCTGTGGGGTTATTGGTCGTCACCGTTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGACATAGTTGGAGAAAGGTTACCCATAATTCCAATGAAACATTGGGAGTTTTGGTAATGAAAACTCGCGGTTTTTTCCCACAAGCTTATTGGTATTGGATTGGTGTAGGAGCATTGATTGGTTATGTTTTTCTATTCAACTTTTTGTTCACATTGGCCTTACAATATCTCAACCCATTCAGAAAGGATCAAGCAGGTCTATCTGAGGAGGAACTGCTTGAGAGAGATGCTTCAACAGCTGTAGAATTTACTCAGTTACCGACTCGAAAGAAAATCTCTGAAACAAAGATAGCAGAAGAAGGACTTATGCCATCGAGATCGTTTTCTGCAAGAGTTGGTAAGGATAAAGCTAGCATAAGTGGAAGGAGGGGAATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGATGAAATCAGATACGCTGTAGACATGCCTCAGGAAATGAAAAACCAAGGAGTTTCTGAGGATCGTCTCGAACTTTTGAAGGGTATCAATGGCGCCTTTAGGCCTGGAGTACTGACTGCTTTGATGGGTGTAAGTGGTGCCGGAAAGACTACTCTAATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATATATTGATGGAAACATCACAATATCTGGCTATCCAAAGAATCAAAAAACATTTGCTCGCATATCGGGATATTGCGAGCAATTTGATATCCATTCACCTAATGTCACCGTTTATGAATCTTTGTTATATTCGGCATGGCTTCGTTTACCACCTGAAGTTGATCAAGCTACTAGAAAGATGTTTATTGAGGAAGTTATGGAGCTTGTAGAGCTTAATTCATTAAGAGAAGCACTTGTTGGATTGCCAGGCGAGACTGGACTTTCAACCGAACAACGCAAGAGACTAACGATTGCAGTTGAACTTGTAGCGAATCCATCGATAATATTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACAGTGAGGAACACCGTTGACACAGGACGAACTGTGGTTTGCACGATCCATCAGCCAAGTATTGACATATTTGATGCCTTTGATGAGCTTCTACTTATGAAATTGGGAGGTGAGCAAATATATTCTGGTCCATTAGGCCGCCATTGCGCTCATTTGATTCATTACTTTGAGGCTATTGAAGGAGTTCCTAAGATCAAAGATGGTTATAATCCTGCAACATGGATGTTGGAAGTTACATCAGCAGGATCAGAAGCAAATCTTAAGGTCAACTTCACTAATGTATACAGAAACTCGGAACTATACCGGAGAAACAAACAATTGATCCAGGAATTAAGTATACCTCCTCAAGATTCAAAGGAGTTATACTTTGATTCTCAATATACACAAACTATGCTGTCACAATGTAAAGCTTGCTTATGGAAACAGCATTTATCATATTGGCGAAACACGTCATATACAGCAGTTAGACTGTTATTTACAACACTAATAGCTTTCTTGTTTGGAATCATATTTTGGAACATCGGCTTGAAAAGGGGAAAGGAGCAAGATCTTTTCAATGCAATGGGATCAATGTATGCTTCTGTTATATTTATTGGAGTACAAAATGGTGCATCAGTGCAACCTGTAATAGCAGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGAATGTATTCTGCTTTGCCTTATGCAGCAGCACAGGCTATTATAGAGCTACCCCACATCTTGGTTCAGACCCTGGTATATGGGATCATTGTATATGCCATGATGGGATTTGAGTGGACAGCATCAAAATTCTTTTGGTATATTTTCTTCAATTACTTCACTTTCTTGTACTACACCTTCTATGGTATGATGACCATGGCCATCACTCCCAACCCACATGTTGCTGCCATACTGTCCTCCTCATTCTATGCAATATGGAATCTTTTCTCAGGCTTTATCATTCCCTTATCTAAAATACCAATATGGTGGAAGTGGTTCTATTGGGTTTGTCCTGTTGCATGGACATTGTATGGATTGGTGACTTCTCAATATGGAGACAACATGCACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAGGAATTACTTTGGTTTTAAACATGACTTCCTAGGAGTGGTTGCAATTGTTGTGGCTAGTTTTTCAGTGTTCTTTGCACTTATTTTCACCTTTGGTTGTAATGTCCTTGGTATCAAAGTTAGCAAGTCCTTCCTATTCCTAGCATATGAGGAAGTGCAAAGTGAATCTGGTTTTGAAGAAGATGCCACACAAAAAATTGTAAGAAGCCCTTTCATCTCATACGGCTCCTCCTTCATGTGTGTAATGATAAACATCCATCGAATCAAAGCCAAAAAGGTTGCACTATCCTCATTATCAACTTAG
Protein sequence

>Msa0055430

MESNEVSRVDSLRRASSSNIWRNNSMNVFSTSEREDDEEALKWAAIERLPTYLRIRRSIINNEEGEGREIDIKKLGLTERKVLLERLVKIAEEDNEKFLLKLKERIERVGLDIPTVEVRFEHINVEAQVYVGGRALPSLLNFFVNVLEGFLNYLHIIPSPKKPLHILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLAKDLKKSGRVTYNGKGLEEFVPQRTSAYISQYDNHIGEMTVRETLAFSARCQGVGHNYDMLTELLRREKEAKIKPDPDVDAYMKAAALEGQEASVVTDYILKILGLEICADIMVGDGMIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTFQIISSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWANKDEPYSFVTVKDFAEAFQIFHIGQKLGDELANPFDKSKCHPSVLTTKKYGVNKKELLKACASREFLLMKRNSFVHIFKVTQLIYLAIMTTTLFLRTKMHKDTVEDGGAYMGALFFTVTVAMFNGISELNMTLMKLPVFYKQRDLLFYPSWAYSLPPWILKIPITIIEAVIWEAITYYAIGYDPSFLRQEMASSLFRLMAALGRDVIVASTVGSFALLVVLVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVTHNSNETLGVLVMKTRGFFPQAYWYWIGVGALIGYVFLFNFLFTLALQYLNPFRKDQAGLSEEELLERDASTAVEFTQLPTRKKISETKIAEEGLMPSRSFSARVGKDKASISGRRGMVLPFQPLSLTFDEIRYAVDMPQEMKNQGVSEDRLELLKGINGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITISGYPKNQKTFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPPEVDQATRKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKLGGEQIYSGPLGRHCAHLIHYFEAIEGVPKIKDGYNPATWMLEVTSAGSEANLKVNFTNVYRNSELYRRNKQLIQELSIPPQDSKELYFDSQYTQTMLSQCKACLWKQHLSYWRNTSYTAVRLLFTTLIAFLFGIIFWNIGLKRGKEQDLFNAMGSMYASVIFIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYAAAQAIIELPHILVQTLVYGIIVYAMMGFEWTASKFFWYIFFNYFTFLYYTFYGMMTMAITPNPHVAAILSSSFYAIWNLFSGFIIPLSKIPIWWKWFYWVCPVAWTLYGLVTSQYGDNMHKLENGQRVEEFVRNYFGFKHDFLGVVAIVVASFSVFFALIFTFGCNVLGIKVSKSFLFLAYEEVQSESGFEEDATQKIVRSPFISYGSSFMCVMINIHRIKAKKVALSSLST*