AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0056090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0056090 MtrunA17_Chr3g0086391 92.681 1052 75 1 1 1052 1 1050 0.0 1922
Msa0056090 MtrunA17_Chr5g0432591 75.712 597 122 9 215 802 18 600 0.0 903
Msa0056090 MtrunA17_Chr6g0476001 72.330 618 133 10 131 745 4 586 0.0 866
Msa0056090 MtrunA17_Chr1g0156271 57.753 632 265 2 405 1036 561 1190 0.0 804
Msa0056090 MtrunA17_Chr1g0211961 56.804 632 271 2 405 1036 526 1155 0.0 797
Msa0056090 MtrunA17_Chr1g0194381 52.232 672 298 10 393 1045 35 702 0.0 714
Msa0056090 MtrunA17_Chr2g0329131 49.110 674 331 5 369 1032 522 1193 0.0 693
Msa0056090 MtrunA17_Chr3g0100131 48.071 674 338 5 369 1032 543 1214 0.0 684
Msa0056090 MtrunA17_Chr3g0099251 50.149 672 288 9 405 1032 46 714 0.0 675
Msa0056090 MtrunA17_Chr4g0044491 48.584 671 296 9 405 1056 49 689 0.0 650
Msa0056090 MtrunA17_Chr7g0259941 45.614 684 311 8 407 1032 41 721 0.0 620
Msa0056090 MtrunA17_Chr2g0283271 46.224 662 318 10 407 1037 46 700 0.0 617
Msa0056090 MtrunA17_Chr8g0359501 45.614 684 311 8 407 1032 41 721 0.0 617
Msa0056090 MtrunA17_Chr8g0377111 45.997 637 315 13 414 1027 4 634 0.0 566
Msa0056090 MtrunA17_Chr1g0148301 94.720 322 15 1 87 408 1 320 0.0 535
Msa0056090 MtrunA17_Chr5g0432601 79.464 224 46 0 829 1052 1 224 5.02e-129 390
Msa0056090 MtrunA17_Chr8g0354481 87.879 198 24 0 514 711 1 198 4.74e-118 361
Msa0056090 MtrunA17_Chr6g0475991 66.667 258 56 1 795 1052 1 228 5.68e-117 360
Msa0056090 MtrunA17_Chr3g0123681 35.606 660 373 17 407 1029 255 899 2.22e-104 360
Msa0056090 MtrunA17_Chr3g0082091 35.647 634 356 16 431 1029 4 620 2.88e-100 346
Msa0056090 MtrunA17_Chr1g0164621 35.276 635 359 17 431 1029 4 622 2.07e-99 343
Msa0056090 MtrunA17_Chr8g0354471 65.532 235 45 7 275 506 2 203 1.15e-88 283
Msa0056090 MtrunA17_Chr8g0354491 80.263 152 30 0 807 958 1 152 1.70e-84 270
Msa0056090 MtrunA17_Chr3g0100151 49.383 243 118 3 679 921 35 272 6.27e-73 243
Msa0056090 MtrunA17_Chr3g0100171 46.460 226 119 2 709 934 44 267 1.74e-66 231
Msa0056090 MtrunA17_Chr8g0359451 46.444 239 85 3 421 616 21 259 1.60e-62 214
Msa0056090 MtrunA17_Chr1g0177141 34.834 422 251 10 623 1025 543 959 3.89e-56 211
Msa0056090 MtrunA17_Chr1g0177141 47.120 191 97 1 411 597 265 455 6.53e-46 179
Msa0056090 MtrunA17_Chr4g0010901 41.065 263 122 5 407 636 265 527 6.60e-55 209
Msa0056090 MtrunA17_Chr4g0010901 28.970 466 237 9 656 1028 692 1156 1.58e-46 182
Msa0056090 MtrunA17_Chr1g0148291 84.906 106 9 1 955 1060 44 142 4.96e-54 184
Msa0056090 MtrunA17_Chr1g0208961 32.170 401 254 9 622 1010 607 1001 1.22e-51 198
Msa0056090 MtrunA17_Chr1g0208961 47.668 193 97 2 409 597 324 516 4.96e-44 174
Msa0056090 MtrunA17_Chr8g0392581 27.828 442 293 11 604 1025 533 968 3.33e-49 190
Msa0056090 MtrunA17_Chr8g0392581 46.632 193 99 1 409 597 268 460 1.67e-44 175
Msa0056090 MtrunA17_Chr0c12g0493631 32.620 374 227 8 604 955 130 500 9.37e-49 185
Msa0056090 MtrunA17_Chr8g0355291 29.146 398 260 11 604 984 508 900 4.22e-46 180
Msa0056090 MtrunA17_Chr8g0355291 48.705 193 95 1 409 597 244 436 1.06e-43 173
Msa0056090 MtrunA17_Chr5g0442401 30.854 363 231 8 623 969 554 912 1.34e-45 179
Msa0056090 MtrunA17_Chr5g0442401 36.283 226 129 3 387 597 158 383 2.69e-39 159
Msa0056090 MtrunA17_Chr1g0195601 29.959 484 266 14 407 834 23 489 5.07e-45 177
Msa0056090 MtrunA17_Chr1g0148311 95.062 81 4 0 1 81 1 81 4.32e-44 154
Msa0056090 MtrunA17_Chr4g0067511 45.745 188 102 0 656 843 341 528 5.76e-42 167
Msa0056090 MtrunA17_Chr4g0067511 35.252 139 63 3 525 636 38 176 1.62e-16 85.1
Msa0056090 MtrunA17_Chr4g0077061 40.000 200 107 3 411 597 602 801 7.77e-36 147
Msa0056090 MtrunA17_Chr4g0077061 34.375 288 157 8 604 885 888 1149 1.77e-35 146
Msa0056090 MtrunA17_Chr8g0355531 29.496 139 95 2 727 863 3 140 3.34e-18 83.2
Msa0056090 MtrunA17_Chr4g0067501 45.205 73 40 0 445 517 15 87 1.74e-15 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0056090 AT1G32490.1 74.478 1054 255 9 1 1052 1 1042 0.0 1615
Msa0056090 AT1G32490.2 73.814 1054 252 10 1 1052 1 1032 0.0 1590
Msa0056090 AT2G35340.1 71.510 1053 288 5 1 1052 1 1042 0.0 1575
Msa0056090 AT2G35340.2 75.028 901 222 2 152 1052 7 904 0.0 1433
Msa0056090 AT4G16680.2 66.624 779 240 6 272 1047 6 767 0.0 1072
Msa0056090 AT3G26560.1 56.811 646 277 2 391 1036 492 1135 0.0 803
Msa0056090 AT4G16680.1 64.452 557 182 3 271 827 84 624 0.0 729
Msa0056090 AT2G47250.1 51.187 674 306 10 390 1044 40 709 0.0 714
Msa0056090 AT3G62310.1 51.042 672 306 9 393 1045 39 706 0.0 712
Msa0056090 AT5G13010.1 49.927 683 330 5 369 1041 509 1189 0.0 708
Msa0056090 AT4G18465.1 48.228 649 312 8 407 1033 41 687 0.0 639
Msa0056090 AT1G26370.1 44.737 684 318 7 407 1033 34 714 0.0 601
Msa0056090 AT3G62310.3 56.212 491 201 3 393 869 39 529 0.0 577
Msa0056090 AT3G62310.2 56.818 484 195 3 393 862 39 522 0.0 573
Msa0056090 AT1G27900.1 44.741 637 328 11 414 1027 4 639 0.0 561
Msa0056090 AT1G27900.3 47.850 535 270 6 414 940 4 537 2.37e-174 521
Msa0056090 AT1G27900.2 47.850 535 270 6 414 940 4 537 6.54e-174 521
Msa0056090 AT5G10370.1 36.141 653 367 16 414 1031 306 943 1.09e-108 373
Msa0056090 AT4G01020.1 36.141 653 367 17 414 1031 303 940 4.73e-107 369
Msa0056090 AT1G58050.1 30.720 625 331 15 411 937 594 1214 2.25e-79 285
Msa0056090 AT5G14900.1 38.790 281 162 7 772 1045 2 279 4.80e-61 211
Msa0056090 AT2G35920.2 33.182 440 269 10 606 1025 427 861 9.96e-60 222
Msa0056090 AT2G35920.2 44.776 201 107 2 397 593 153 353 2.72e-46 181
Msa0056090 AT2G35920.1 33.182 440 269 10 606 1025 485 919 2.18e-59 222
Msa0056090 AT2G35920.1 44.776 201 107 2 397 593 211 411 3.93e-46 181
Msa0056090 AT2G35920.3 33.182 440 269 10 606 1025 517 951 2.56e-59 222
Msa0056090 AT2G35920.3 42.534 221 112 3 388 593 223 443 3.87e-46 181
Msa0056090 AT1G33390.2 38.516 283 140 4 407 655 234 516 6.44e-55 209
Msa0056090 AT1G33390.2 31.207 439 237 7 654 1028 645 1082 8.84e-55 209
Msa0056090 AT1G33390.1 38.516 283 140 4 407 655 234 516 6.44e-55 209
Msa0056090 AT1G33390.1 31.207 439 237 7 654 1028 645 1082 8.84e-55 209
Msa0056090 AT2G01130.2 31.841 402 258 7 620 1010 431 827 9.96e-52 198
Msa0056090 AT2G01130.2 45.320 203 107 1 399 597 140 342 6.62e-45 177
Msa0056090 AT2G01130.1 31.841 402 258 7 620 1010 496 892 1.07e-51 198
Msa0056090 AT2G01130.1 45.320 203 107 1 399 597 205 407 9.79e-45 176
Msa0056090 AT1G58060.1 30.083 482 266 12 604 1017 895 1373 2.21e-51 198
Msa0056090 AT1G58060.1 42.647 204 97 5 411 597 611 811 1.80e-36 150
Msa0056090 AT1G48650.2 30.023 443 281 13 604 1025 558 992 2.04e-47 185
Msa0056090 AT1G48650.2 46.798 203 100 2 411 609 296 494 6.27e-46 180
Msa0056090 AT1G48650.1 30.023 443 281 13 604 1025 558 992 2.59e-47 185
Msa0056090 AT1G48650.1 46.798 203 100 2 411 609 296 494 6.52e-46 180
Msa0056090 AT1G06670.2 33.245 379 231 9 623 984 576 949 5.24e-47 184
Msa0056090 AT1G06670.2 41.500 200 105 4 407 597 210 406 1.89e-41 166
Msa0056090 AT1G06670.1 33.245 379 231 10 623 984 576 949 6.23e-47 184
Msa0056090 AT1G06670.1 41.500 200 105 4 407 597 210 406 1.73e-41 167
Msa0056090 AT5G04895.1 45.274 201 106 1 401 597 247 447 1.44e-45 179
Msa0056090 AT5G04895.1 29.975 397 256 12 604 983 519 910 1.97e-45 179
Msa0056090 AT2G30800.2 31.044 364 229 10 623 969 209 567 1.06e-44 176
Msa0056090 AT2G30800.1 31.044 364 229 10 623 969 552 910 2.06e-44 176
Msa0056090 AT2G30800.1 40.933 193 108 2 407 593 180 372 2.60e-42 169
Msa0056090 AT2G47680.1 29.876 482 270 13 414 843 26 491 2.30e-36 149

Find 243 sgRNAs with CRISPR-Local

Find 1081 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATATATTATATATAAAT+AGG 0.146844 1_2:-11598236 None:intergenic
CTTGTTGCACTTTGAATTTA+TGG 0.177526 1_2:+11592584 Msa0056090:CDS
AGATTAGTCCGTTGTATTTC+AGG 0.194405 1_2:-11592519 None:intergenic
TTCCTCCCGATAAGTATAAA+TGG 0.197293 1_2:-11590173 None:intergenic
CATGCCTCTTGTTCAGAAAA+TGG 0.207622 1_2:-11588302 None:intergenic
CTGTGGCTATGCAGCGTTAC+AGG 0.216421 1_2:+11587805 Msa0056090:CDS
AAAGACTCCATTCCTGTCTT+TGG 0.226123 1_2:-11592366 None:intergenic
TTTATTCCTTGCAGTGAAAA+TGG 0.232905 1_2:+11583292 Msa0056090:intron
ACACCATTGTGTTGAATAAT+TGG 0.239583 1_2:-11593416 None:intergenic
TGTGATATTTATTATGAAAT+TGG 0.259135 1_2:+11597969 Msa0056090:three_prime_UTR
ACAAATAAAATTGTATTTGT+AGG 0.262153 1_2:-11598340 None:intergenic
GTGGGAAAGCTAGTGGAGTT+TGG 0.271397 1_2:+11583554 Msa0056090:CDS
TTTCCCAGGTTTACAATTCT+TGG 0.283777 1_2:+11593386 Msa0056090:intron
GCTCCAATATTTAAAATTCC+AGG 0.300236 1_2:+11591961 Msa0056090:CDS
GCGGCTTCAGCTGCGTATTC+CGG 0.307290 1_2:-11582231 None:intergenic
GCTCGAGTTGCTCACGAATT+AGG 0.308881 1_2:+11591031 Msa0056090:CDS
ATTGCTGCTATGCTTTCTAT+TGG 0.317382 1_2:+11592789 Msa0056090:CDS
ATGCAACGAGCTGGTCGTTC+TGG 0.323755 1_2:+11592420 Msa0056090:CDS
ACAACCTTTCGTGCCCCTTC+AGG 0.326868 1_2:-11592252 None:intergenic
CAATGATGTTTCTGCAATAT+TGG 0.329045 1_2:-11592283 None:intergenic
GCCAGCTTCATGAAGATATT+GGG 0.329381 1_2:-11590480 None:intergenic
GCATGCACTTGTTTATCCTT+TGG 0.340825 1_2:-11592831 None:intergenic
ATCAGAGGCATTTGCAATTC+AGG 0.344723 1_2:+11588897 Msa0056090:CDS
AATTACCCATTTATACTTAT+CGG 0.347344 1_2:+11590167 Msa0056090:CDS
GAAACATCATTGACAATTGA+TGG 0.350686 1_2:+11592294 Msa0056090:CDS
GATATATTGATATTCCTTAC+TGG 0.351891 1_2:+11592090 Msa0056090:CDS
ATTGTTGGTGAAACCGGTTC+TGG 0.354130 1_2:+11590440 Msa0056090:CDS
AAGCTCCAGGGCTTTCAATA+AGG 0.355213 1_2:-11592625 None:intergenic
CTCTGATGCCGACTTTGCTT+TGG 0.357796 1_2:-11588881 None:intergenic
CACTGATCAAAACCACAAAT+TGG 0.358739 1_2:+11582195 Msa0056090:five_prime_UTR
TTGAACCTCGTTGGTGGTAA+TGG 0.360128 1_2:+11598130 Msa0056090:three_prime_UTR
TGGGAAAGCTAGTGGAGTTT+GGG 0.365327 1_2:+11583555 Msa0056090:CDS
CTTGTAATTGTTGGTGAAAC+CGG 0.367977 1_2:+11590434 Msa0056090:CDS
CATACTGTCTTCAAGATCAT+TGG 0.369946 1_2:-11596298 None:intergenic
AGCCTGATCTGGCAAGTTAT+AGG 0.373072 1_2:+11591396 Msa0056090:CDS
GCATCTAAGTAGTCAGCTTC+TGG 0.375050 1_2:-11592021 None:intergenic
CTCTGCACGTCCTTCTCCAC+GGG 0.380162 1_2:-11597840 None:intergenic
AGCCAGCTTCATGAAGATAT+TGG 0.382933 1_2:-11590481 None:intergenic
ATGCCTTGATAAAATCGATT+TGG 0.390099 1_2:-11588726 None:intergenic
CCACTCAACTTCCGATATAT+CGG 0.390259 1_2:-11598068 None:intergenic
AAGCATCGAACTAGAGGCTT+AGG 0.390683 1_2:+11592147 Msa0056090:CDS
GTAGTCAGCTTCTGGTGCTT+TGG 0.393469 1_2:-11592013 None:intergenic
AGAAAGATTGAAAGATCAAA+GGG 0.396158 1_2:+11584566 Msa0056090:CDS
GAACCTTTAGCAATGCAATA+TGG 0.398379 1_2:-11592896 None:intergenic
AAATATATTATATATAAATA+GGG 0.400158 1_2:-11598235 None:intergenic
AACAGACACCCGTGCGTTTG+TGG 0.400171 1_2:+11583586 Msa0056090:CDS
GTTGGTAAGTTGGCATATAT+AGG 0.400851 1_2:-11592198 None:intergenic
TATAGGACATATAATTAATT+CGG 0.402494 1_2:-11592181 None:intergenic
CACGGTTTGTGATTTCTTTG+CGG 0.404242 1_2:-11582260 None:intergenic
ATTTCTTGGTGAGCCTGATC+TGG 0.405349 1_2:+11591385 Msa0056090:CDS
TGGTTGTGAGCACTAGTTCA+TGG 0.410005 1_2:-11596113 None:intergenic
CACCTATAACTTGCCAGATC+AGG 0.410649 1_2:-11591398 None:intergenic
ATTACCCATTTATACTTATC+GGG 0.413830 1_2:+11590168 Msa0056090:CDS
GGAAAGGCAACACTGAAGTA+TGG 0.421539 1_2:+11588452 Msa0056090:intron
TATCATCACCACTAACAATA+TGG 0.422069 1_2:-11583868 None:intergenic
GCATGGGAGGAACATCAAAT+TGG 0.423699 1_2:+11588320 Msa0056090:CDS
TTGTGTAGTCTTTCCAGAAC+CGG 0.423779 1_2:-11590453 None:intergenic
AAACAGGTACTTGTAATTGT+TGG 0.440991 1_2:+11590425 Msa0056090:intron
GATGAGCAATATCTATTTGA+AGG 0.443140 1_2:+11586164 Msa0056090:CDS
TGTATGTAGGTTTGTGTTCG+AGG 0.444416 1_2:+11588702 Msa0056090:intron
TTGAGTGGTGGTTGATTTGA+AGG 0.444883 1_2:+11598083 Msa0056090:three_prime_UTR
CAATTTCTTCTTGACCAGTA+AGG 0.444892 1_2:-11592104 None:intergenic
GATAATGACCATATTGTTAG+TGG 0.445192 1_2:+11583860 Msa0056090:CDS
ATAAAATATGTCATTGATCC+AGG 0.451351 1_2:+11592318 Msa0056090:CDS
TACTTCACCAGCTGATTTAG+TGG 0.452442 1_2:+11583535 Msa0056090:CDS
GAAGCTACGTCTCCAATTTG+TGG 0.452804 1_2:-11582207 None:intergenic
TTTCGTGCCCCTTCAGGAGT+TGG 0.453404 1_2:-11592246 None:intergenic
AAGGACGTGCAGAGAACCGC+AGG 0.454719 1_2:+11597849 Msa0056090:CDS
ATCAAGAAATCTATAGCATC+TGG 0.457130 1_2:+11594837 Msa0056090:CDS
TTAGGTAAGAAGTATGAAAC+AGG 0.458237 1_2:+11594731 Msa0056090:intron
TGTTGACATACACCCTAGTT+CGG 0.460180 1_2:+11595006 Msa0056090:CDS
AGATGCTATAGATTTCTTGA+TGG 0.460694 1_2:-11594835 None:intergenic
ATTACCCTTGATGAAGATAG+TGG 0.461633 1_2:+11584136 Msa0056090:CDS
CAGGTCCGGGAAAATGCTTC+CGG 0.462742 1_2:+11592448 Msa0056090:CDS
AATTGGAGACGTAGCTTCGC+CGG 0.464010 1_2:+11582212 Msa0056090:five_prime_UTR
TGGTGTCTCCTCCGATATAT+CGG 0.464267 1_2:+11598057 Msa0056090:three_prime_UTR
TACCTGTCTCATATATTCCT+TGG 0.466265 1_2:-11596133 None:intergenic
GTTAAAGTCACAGTGGTTGT+TGG 0.466697 1_2:+11596251 Msa0056090:CDS
AGAGTTCCTCGTAGATCGTC+TGG 0.468538 1_2:+11583623 Msa0056090:CDS
ATTGCACCTGTGGATAAAGT+TGG 0.468770 1_2:+11598290 Msa0056090:three_prime_UTR
AGACCATATTGCATTGCTAA+AGG 0.469557 1_2:+11592893 Msa0056090:CDS
ACAATTGTACAGTACATCAT+TGG 0.470196 1_2:+11583383 Msa0056090:CDS
ATTGAAAGATCAAAGGGAAA+AGG 0.471022 1_2:+11584572 Msa0056090:CDS
AAGAAAATGCCCCGTGGAGA+AGG 0.471143 1_2:+11597830 Msa0056090:CDS
AATTGTATGCAGTATACAAC+CGG 0.472110 1_2:-11592467 None:intergenic
AAGTGGAACAGCGTGAGTTA+AGG 0.473874 1_2:+11586201 Msa0056090:CDS
TCCTCCCGATAAGTATAAAT+GGG 0.473885 1_2:-11590172 None:intergenic
GCTGGTCGTTCTGGAAGAAC+AGG 0.475155 1_2:+11592429 Msa0056090:CDS
CCCCAATATCTTCATGAAGC+TGG 0.475172 1_2:+11590479 Msa0056090:CDS
AAGAAAGATTGAAAGATCAA+AGG 0.475191 1_2:+11584565 Msa0056090:CDS
ACCTGTGCCAGCCCCGAACT+AGG 0.477695 1_2:-11595019 None:intergenic
GTTGACATACACCCTAGTTC+GGG 0.478577 1_2:+11595007 Msa0056090:CDS
GTGTTATGAAAATTATATAC+AGG 0.478728 1_2:+11593435 Msa0056090:CDS
ATCCATGTTACTCAATCTCC+TGG 0.480603 1_2:+11592066 Msa0056090:CDS
TTTGATCAGTGTGGTTTCGA+TGG 0.481250 1_2:-11582183 None:intergenic
ATACTGTCTTCAAGATCATT+GGG 0.482974 1_2:-11596297 None:intergenic
CAACAATGCAGGTAAGTTCA+AGG 0.483223 1_2:+11584083 Msa0056090:intron
GCAATGACAATTTAAAGAGA+TGG 0.483789 1_2:+11583318 Msa0056090:CDS
AATTCCAGGGAGAAGGTATC+CGG 0.486709 1_2:+11591975 Msa0056090:CDS
TCATGGTACACAACGCATCT+TGG 0.487314 1_2:-11596096 None:intergenic
TCGTTCTGGAAGAACAGGTC+CGG 0.488085 1_2:+11592434 Msa0056090:CDS
AGGAATATCAATATATCTCC+AGG 0.491393 1_2:-11592084 None:intergenic
AGGTAAGTTCAAGGAAAGAA+AGG 0.492616 1_2:+11584092 Msa0056090:intron
TTGTAGTTCAGTTGGTAAGT+TGG 0.494861 1_2:-11592208 None:intergenic
CTAATATTGTAGTGTTGTGA+TGG 0.497399 1_2:+11591487 Msa0056090:intron
CCTTCCTTATCATAAGTGTC+TGG 0.497584 1_2:-11587756 None:intergenic
AGCTGGTGAAGTAGCTTGCT+TGG 0.497637 1_2:-11583525 None:intergenic
TCTCTGCACGTCCTTCTCCA+CGG 0.501082 1_2:-11597841 None:intergenic
TTGATCAGTGTGGTTTCGAT+GGG 0.503328 1_2:-11582182 None:intergenic
TGAGGCCTTATTGAAAGCCC+TGG 0.503893 1_2:+11592620 Msa0056090:CDS
TTCAATAAGGCCTCAGTAGG+TGG 0.504917 1_2:-11592612 None:intergenic
AAAAGTTATAATCCAAAGAC+AGG 0.505829 1_2:+11592354 Msa0056090:CDS
AATGCCAGACACTTATGATA+AGG 0.508097 1_2:+11587752 Msa0056090:CDS
TTAAATGCTTTAAATAAGCA+TGG 0.512174 1_2:+11592657 Msa0056090:CDS
ATGTTACTGAGAGAATTTCT+TGG 0.512332 1_2:+11591371 Msa0056090:CDS
AATAGAAAGCATAGCAGCAA+TGG 0.513412 1_2:-11592787 None:intergenic
TAGTGTTGTGATGGTGGATG+AGG 0.516430 1_2:+11591496 Msa0056090:intron
GATATCAGCAACTTGAGATC+AGG 0.516577 1_2:-11591892 None:intergenic
GCTTTATTGAACCTCGTTGG+TGG 0.517861 1_2:+11598124 Msa0056090:three_prime_UTR
ATGATGATATGTGCTGTTTG+AGG 0.517977 1_2:+11585320 Msa0056090:CDS
TTAAAGCAAATAGAAGCTCC+AGG 0.519132 1_2:-11592638 None:intergenic
ATCGGTGATGGATGGAGATA+AGG 0.522162 1_2:+11588747 Msa0056090:CDS
GAAGTACATTCGTTAGAAAG+TGG 0.522319 1_2:+11597871 Msa0056090:exon
CCTGTGCCAGCCCCGAACTA+GGG 0.522753 1_2:-11595018 None:intergenic
CTCCAATATTTAAAATTCCA+GGG 0.524324 1_2:+11591962 Msa0056090:CDS
GCTGCTTTATTGAACCTCGT+TGG 0.524864 1_2:+11598121 Msa0056090:three_prime_UTR
TTGAAGGAACAAATCATTGT+CGG 0.525786 1_2:+11598099 Msa0056090:three_prime_UTR
CTGAACCACTATCTTCATCA+AGG 0.525792 1_2:-11584141 None:intergenic
CAATGACAATTTAAAGAGAT+GGG 0.527977 1_2:+11583319 Msa0056090:CDS
CCCTAGTTCGGGGCTGGCAC+AGG 0.529477 1_2:+11595018 Msa0056090:CDS
AACTCCTGAAGGGGCACGAA+AGG 0.530127 1_2:+11592248 Msa0056090:CDS
AGAGAGAGAAGCTGCAATGT+TGG 0.534326 1_2:+11583790 Msa0056090:CDS
GATTTCTTTGCGGCGGCGAG+CGG 0.536919 1_2:-11582250 None:intergenic
ATACCTGGCGGCGTTTCTCA+CGG 0.537609 1_2:-11582278 None:intergenic
AGCTTTCCCACTAAATCAGC+TGG 0.539528 1_2:-11583542 None:intergenic
ATCAAGGCATCGGTGATGGA+TGG 0.540775 1_2:+11588739 Msa0056090:CDS
TTGGTGAAGTGTATTTCCAC+CGG 0.541108 1_2:-11591994 None:intergenic
GCCTCAGCAATGCAACGAGC+TGG 0.542261 1_2:+11592411 Msa0056090:CDS
GCAGTTTAATTACGATGAGA+TGG 0.542455 1_2:+11588840 Msa0056090:intron
CCAGGTTTACAATTCTTGGA+AGG 0.543423 1_2:+11593390 Msa0056090:intron
CGTTCTGGAAGAACAGGTCC+GGG 0.543431 1_2:+11592435 Msa0056090:CDS
TTATCGGGAGGAATTGCTCC+AGG 0.543928 1_2:+11590183 Msa0056090:CDS
CCAGGCTGTTCATGACCACC+AGG 0.545799 1_2:+11590201 Msa0056090:CDS
CTCCAGGAGATTGAGTAACA+TGG 0.546725 1_2:-11592068 None:intergenic
AGGTGTGAAGCTTTCAGAAG+TGG 0.547984 1_2:+11586184 Msa0056090:CDS
TATTTAAAATTCCAGGGAGA+AGG 0.552271 1_2:+11591968 Msa0056090:CDS
CAAAGCAAAGTCGGCATCAG+AGG 0.552593 1_2:+11588882 Msa0056090:CDS
ATATTTGAACCAACTCCTGA+AGG 0.552635 1_2:+11592237 Msa0056090:CDS
AGCATCGAACTAGAGGCTTA+GGG 0.553519 1_2:+11592148 Msa0056090:CDS
TGTCTTCAAGATCATTGGGC+TGG 0.553996 1_2:-11596293 None:intergenic
TTCTGAACAAGAGGCATGGG+AGG 0.554659 1_2:+11588307 Msa0056090:CDS
AAACCGTGAGAAACGCCGCC+AGG 0.557110 1_2:+11582275 Msa0056090:five_prime_UTR
TATTTGAACCAACTCCTGAA+GGG 0.558480 1_2:+11592238 Msa0056090:CDS
GATAAGTTGATGTCACTGCT+TGG 0.562270 1_2:+11583347 Msa0056090:CDS
ATATTGTAGTGTTGTGATGG+TGG 0.565373 1_2:+11591490 Msa0056090:intron
TACAAACCAACTTTATCCAC+AGG 0.567145 1_2:-11598296 None:intergenic
ACCAGCTCGTTGCATTGCTG+AGG 0.567730 1_2:-11592412 None:intergenic
GGTAAGTTCAAGGAAAGAAA+GGG 0.567833 1_2:+11584093 Msa0056090:intron
TCCACCGGATACCTTCTCCC+TGG 0.569655 1_2:-11591979 None:intergenic
TTTCTGCAATATTGGTAGCA+AGG 0.571378 1_2:-11592275 None:intergenic
AACCAAGGAATATATGAGAC+AGG 0.572507 1_2:+11596131 Msa0056090:CDS
TTGTGAACTTAAGTCACAGA+TGG 0.572563 1_2:+11598359 Msa0056090:three_prime_UTR
AGTCCGTTGTATTTCAGGAA+CGG 0.574985 1_2:-11592514 None:intergenic
GCACTTGTTTATCCTTTGGA+CGG 0.575029 1_2:-11592827 None:intergenic
TGAAAAGTCCAAAGCAAAGT+CGG 0.575985 1_2:+11588873 Msa0056090:CDS
TGCCATCCGTCTACCTACCT+TGG 0.577604 1_2:-11592688 None:intergenic
AATTTCTTCCACAAACGCAC+GGG 0.579411 1_2:-11583594 None:intergenic
CATACACCCTAGTTCGGGGC+TGG 0.580060 1_2:+11595012 Msa0056090:CDS
TGGTCAAGAAGAAATTGAAA+CGG 0.580204 1_2:+11592110 Msa0056090:CDS
CACGAATTAGGTGTTAAACT+AGG 0.581838 1_2:+11591043 Msa0056090:CDS
AAAAGAAATTAGAAGAACTG+AGG 0.584487 1_2:+11585955 Msa0056090:CDS
AAATTTCTTCCACAAACGCA+CGG 0.585934 1_2:-11583595 None:intergenic
TGGCTACACAAAACATGGAA+TGG 0.586250 1_2:+11590499 Msa0056090:CDS
TTATAATCCAAAGACAGGAA+TGG 0.587107 1_2:+11592359 Msa0056090:CDS
GCGGCGTTGATCAAGAAAAG+AGG 0.587462 1_2:+11587778 Msa0056090:CDS
ATGATGTACTGTACAATTGT+GGG 0.587763 1_2:-11583380 None:intergenic
ATCTTGAAGCATCGAACTAG+AGG 0.588718 1_2:+11592141 Msa0056090:CDS
TTTGACAACATAGGATCAAG+TGG 0.590587 1_2:-11592717 None:intergenic
AAATTAACACGAAAGGAAGA+AGG 0.591634 1_2:+11585148 Msa0056090:CDS
AACTCGCAGGTCTATTAGAG+AGG 0.593385 1_2:+11594772 Msa0056090:CDS
CATTGGGCTGGTAATAGTGA+GGG 0.595617 1_2:-11596281 None:intergenic
AATGATGTACTGTACAATTG+TGG 0.596474 1_2:-11583381 None:intergenic
TTCTCTCAGTAACATTCCAT+CGG 0.597057 1_2:-11591363 None:intergenic
TCAAGATGATCAAGAAGATG+AGG 0.598731 1_2:+11583967 Msa0056090:CDS
CAATAGGGATTCAAATGCTG+AGG 0.601241 1_2:+11588268 Msa0056090:intron
CTGATGTGCAATCCTCAAAA+CGG 0.602256 1_2:-11591316 None:intergenic
ATAGACCTGCGAGTTGATCA+CGG 0.603466 1_2:-11594764 None:intergenic
CATGGTCAGTTAACCAAGGT+AGG 0.603597 1_2:+11592675 Msa0056090:CDS
CCTGGTGGTCATGAACAGCC+TGG 0.603608 1_2:-11590201 None:intergenic
ACTTCACCAGCTGATTTAGT+GGG 0.604883 1_2:+11583536 Msa0056090:CDS
CCGATATATCGGAAGTTGAG+TGG 0.605601 1_2:+11598068 Msa0056090:three_prime_UTR
GTGGTTATTCATTGCACCTG+TGG 0.605863 1_2:+11598280 Msa0056090:three_prime_UTR
TAAAGCAAATAGAAGCTCCA+GGG 0.607651 1_2:-11592637 None:intergenic
TGATGAAGATAGTGGTTCAG+AGG 0.608695 1_2:+11584144 Msa0056090:CDS
GCAGGCGGACAATGTAAATG+AGG 0.610136 1_2:+11586677 Msa0056090:CDS
GAGAAGCTGCAATGTTGGCA+AGG 0.611056 1_2:+11583795 Msa0056090:CDS
GCTTTCAATAAGGCCTCAGT+AGG 0.611250 1_2:-11592615 None:intergenic
TGTGCAATCCTCAAAACGGA+TGG 0.611786 1_2:-11591312 None:intergenic
CCAGCTTCATGAAGATATTG+GGG 0.612263 1_2:-11590479 None:intergenic
AATAAGGCCTCAGTAGGTGG+AGG 0.613182 1_2:-11592609 None:intergenic
GAAGCTGGCTACACAAAACA+TGG 0.615560 1_2:+11590494 Msa0056090:CDS
AAAGAGATGCTGCAGCGACA+CGG 0.616391 1_2:+11584619 Msa0056090:CDS
ATTTGAACCAACTCCTGAAG+GGG 0.617393 1_2:+11592239 Msa0056090:CDS
CCAGACACTTATGATAAGGA+AGG 0.618945 1_2:+11587756 Msa0056090:CDS
TTGACAACATAGGATCAAGT+GGG 0.619054 1_2:-11592716 None:intergenic
GATATCCGTGATCAACTCGC+AGG 0.622187 1_2:+11594759 Msa0056090:CDS
TGATTTAGTGGGAAAGCTAG+TGG 0.623101 1_2:+11583547 Msa0056090:CDS
AGATGCTGCAGCGACACGGA+AGG 0.626124 1_2:+11584623 Msa0056090:CDS
TCATTGGGCTGGTAATAGTG+AGG 0.626565 1_2:-11596282 None:intergenic
CCGTGTTGCTGCTATGAGTG+TGG 0.626901 1_2:+11591006 Msa0056090:CDS
AGAATACTTGAAGAAAAGAG+AGG 0.628022 1_2:+11585932 Msa0056090:CDS
CTTAGATGCAGCTATTGTCA+CGG 0.630129 1_2:+11592035 Msa0056090:CDS
TATGGATCCTCCACCTACTG+AGG 0.632354 1_2:+11592602 Msa0056090:CDS
CCACACTCATAGCAGCAACA+CGG 0.633863 1_2:-11591006 None:intergenic
ACCCATTTATACTTATCGGG+AGG 0.636238 1_2:+11590171 Msa0056090:CDS
AACTTACTGGTAATCATCAG+AGG 0.636448 1_2:-11588495 None:intergenic
GACACTTATGATAAGGAAGG+CGG 0.642296 1_2:+11587759 Msa0056090:CDS
ACTCGCAGGTCTATTAGAGA+GGG 0.649165 1_2:+11594773 Msa0056090:CDS
TGAACCACTATCTTCATCAA+GGG 0.651196 1_2:-11584140 None:intergenic
AACCAAGGTAGGTAGACGGA+TGG 0.651340 1_2:+11592686 Msa0056090:CDS
TCCAGGGAGAAGGTATCCGG+TGG 0.655814 1_2:+11591978 Msa0056090:CDS
CTCATAGCAGCAACACGGCG+TGG 0.668107 1_2:-11591001 None:intergenic
AGACCAATTATTCAACACAA+TGG 0.671069 1_2:+11593413 Msa0056090:CDS
AGTTAACCAAGGTAGGTAGA+CGG 0.674267 1_2:+11592682 Msa0056090:CDS
GGTTTGTGATTTCTTTGCGG+CGG 0.677473 1_2:-11582257 None:intergenic
ATTGGGCTGGTAATAGTGAG+GGG 0.677716 1_2:-11596280 None:intergenic
GCAACTTGAGATCAGGTCGG+AGG 0.678991 1_2:-11591885 None:intergenic
TGAACTAGTGCTCACAACCA+AGG 0.679202 1_2:+11596116 Msa0056090:CDS
CTCAACTTCCGATATATCGG+AGG 0.681852 1_2:-11598065 None:intergenic
CAATGTTGGCAAGGAAACAG+CGG 0.684749 1_2:+11583804 Msa0056090:CDS
TAAGCATGGTCAGTTAACCA+AGG 0.687119 1_2:+11592671 Msa0056090:CDS
TTGGTGGTAATGGAAATTGA+CGG 0.687338 1_2:+11598140 Msa0056090:three_prime_UTR
TCTAACGAATGTACTTCCTG+CGG 0.687433 1_2:-11597865 None:intergenic
ACACCGTTCCTGAAATACAA+CGG 0.689022 1_2:+11592511 Msa0056090:CDS
TTGACATACACCCTAGTTCG+GGG 0.689250 1_2:+11595008 Msa0056090:CDS
ATATATCGGAAGTTGAGTGG+TGG 0.693892 1_2:+11598071 Msa0056090:three_prime_UTR
TCAGCAACTTGAGATCAGGT+CGG 0.700568 1_2:-11591888 None:intergenic
ATCTCAAAGAAAATGCCCCG+TGG 0.718376 1_2:+11597824 Msa0056090:CDS
AATTTCCATTACCACCAACG+AGG 0.727578 1_2:-11598135 None:intergenic
AGGTGTTAAACTAGGACACG+AGG 0.732412 1_2:+11591051 Msa0056090:CDS
TCTGCACGTCCTTCTCCACG+GGG 0.743537 1_2:-11597839 None:intergenic
TCACGGAGTTAAAGTCACAG+TGG 0.770894 1_2:+11596244 Msa0056090:CDS
TTTAAGCCAGACGATCTACG+AGG 0.785498 1_2:-11583629 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAAAAATAATAAAT+AGG - chr1_2:11583026-11583045 None:intergenic 0.0%
!! AAATATATTATATATAAATA+GGG - chr1_2:11598238-11598257 None:intergenic 0.0%
!! AAAATATATTATATATAAAT+AGG - chr1_2:11598239-11598258 None:intergenic 0.0%
!! TTTCACAATTTATTTAAATT+TGG + chr1_2:11582497-11582516 Msa0056090:intron 10.0%
!! TTCACAATTTATTTAAATTT+GGG + chr1_2:11582498-11582517 Msa0056090:intron 10.0%
!!! AAATAAAAGTTTTAGTTAAT+CGG + chr1_2:11583046-11583065 Msa0056090:intron 10.0%
!!! GATTGTATATAATAATTTTT+AGG - chr1_2:11583441-11583460 None:intergenic 10.0%
!!! ATTATTATATACAATCATTT+TGG + chr1_2:11583445-11583464 Msa0056090:intron 10.0%
!!! ATATTTCATTAATATCATTT+TGG + chr1_2:11583494-11583513 Msa0056090:intron 10.0%
!! CAAATATATAAAAATATACA+AGG - chr1_2:11587487-11587506 None:intergenic 10.0%
!!! CTTGTATATTTTTATATATT+TGG + chr1_2:11587485-11587504 Msa0056090:intron 10.0%
!!! TTATATTTTTTTGGAAAATT+GGG + chr1_2:11587628-11587647 Msa0056090:intron 10.0%
!!! ATTGATTTTTTTTATCAATA+GGG + chr1_2:11588253-11588272 Msa0056090:intron 10.0%
!!! TAAGTCATTTTTTTTTTTAA+AGG + chr1_2:11590581-11590600 Msa0056090:intron 10.0%
!!! ATTTTTTTTTTTAAAGGAAT+AGG + chr1_2:11590587-11590606 Msa0056090:intron 10.0%
!!! TAAGTCATTTTTTTTTTAAA+AGG + chr1_2:11590643-11590662 Msa0056090:intron 10.0%
!!! ATTTTTTTTTTAAAAGGAAT+AGG + chr1_2:11590649-11590668 Msa0056090:intron 10.0%
!! TGTTATATGAATAATTTAAT+TGG - chr1_2:11593602-11593621 None:intergenic 10.0%
!!! TTTTTTTTTTTTGTTGATTT+TGG + chr1_2:11596581-11596600 Msa0056090:intron 10.0%
!!! TGTATTTTTATTTTTCTTTT+TGG + chr1_2:11598192-11598211 Msa0056090:three_prime_UTR 10.0%
!!! AATAAAAGTTTTAGTTAATC+GGG + chr1_2:11583047-11583066 Msa0056090:intron 15.0%
!!! ATAAACATTTTTTAACATGA+TGG + chr1_2:11583230-11583249 Msa0056090:intron 15.0%
!!! AAAATAAATAAGCCTAATTT+TGG - chr1_2:11583275-11583294 None:intergenic 15.0%
!! TTACAAAAAAAAGAAAATAG+AGG - chr1_2:11584337-11584356 None:intergenic 15.0%
!! AAGAAATTAAAATCAACATT+TGG - chr1_2:11585245-11585264 None:intergenic 15.0%
!!! AAATGTTGATTTTAATTTCT+TGG + chr1_2:11585244-11585263 Msa0056090:intron 15.0%
!!! AGAAGAAGAAATATATTTTT+GGG + chr1_2:11585433-11585452 Msa0056090:intron 15.0%
!!! CTATATGTTGTTTTTTATTT+GGG - chr1_2:11585787-11585806 None:intergenic 15.0%
!!! ACTATATGTTGTTTTTTATT+TGG - chr1_2:11585788-11585807 None:intergenic 15.0%
!! CAAATTAATATTTGATATCT+TGG + chr1_2:11586045-11586064 Msa0056090:intron 15.0%
!! AATATAACTATAGAAGATTA+AGG - chr1_2:11586104-11586123 None:intergenic 15.0%
!! TATATGAACTTATAAAAAAG+CGG + chr1_2:11586649-11586668 Msa0056090:CDS 15.0%
!! ATATTTATTATATCATTACG+TGG + chr1_2:11586734-11586753 Msa0056090:intron 15.0%
!! TATTTATTATATCATTACGT+GGG + chr1_2:11586735-11586754 Msa0056090:intron 15.0%
!!! ATATATGTTTTGTTAAATAG+TGG + chr1_2:11587385-11587404 Msa0056090:intron 15.0%
!!! TATATGTTTTGTTAAATAGT+GGG + chr1_2:11587386-11587405 Msa0056090:intron 15.0%
!!! CTTATATTTTTTTGGAAAAT+TGG + chr1_2:11587627-11587646 Msa0056090:intron 15.0%
!! GACAATAATATAAAAAGAAA+AGG + chr1_2:11587860-11587879 Msa0056090:intron 15.0%
!! AATATAAAAAGAAAAGGAAA+AGG + chr1_2:11587866-11587885 Msa0056090:intron 15.0%
!! ATATAAAAAGAAAAGGAAAA+GGG + chr1_2:11587867-11587886 Msa0056090:intron 15.0%
!! ATATTGTATATTCCTAATAA+AGG - chr1_2:11587976-11587995 None:intergenic 15.0%
!!! CATTGATTTTTTTTATCAAT+AGG + chr1_2:11588252-11588271 Msa0056090:intron 15.0%
!! TATTCTTAATAATATCTTCT+AGG + chr1_2:11588431-11588450 Msa0056090:intron 15.0%
!!! TTTTTACAATTTATGTATGT+AGG + chr1_2:11588689-11588708 Msa0056090:intron 15.0%
!!! GAGAAGTTTTTAATTAAATA+AGG + chr1_2:11589118-11589137 Msa0056090:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + chr1_2:11589328-11589347 Msa0056090:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + chr1_2:11589329-11589348 Msa0056090:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr1_2:11589393-11589412 Msa0056090:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr1_2:11589394-11589413 Msa0056090:intron 15.0%
!! TTGTGTAAATTTAAATTCAT+AGG - chr1_2:11589917-11589936 None:intergenic 15.0%
!!! ATTTTTTATGTTCATACAAT+AGG + chr1_2:11590557-11590576 Msa0056090:intron 15.0%
!! TACATATAAATAATATAACG+AGG - chr1_2:11590704-11590723 None:intergenic 15.0%
!!! TGTACTTTTATTTTTACAAT+TGG + chr1_2:11590720-11590739 Msa0056090:intron 15.0%
!! TATAGGACATATAATTAATT+CGG - chr1_2:11592184-11592203 None:intergenic 15.0%
!!! ATACAATTTTCAAAATGATT+TGG + chr1_2:11592482-11592501 Msa0056090:CDS 15.0%
!!! TACTCATTATTATTTTGATT+TGG - chr1_2:11593159-11593178 None:intergenic 15.0%
!! TGGGAAAAAAATTATTAATA+AGG - chr1_2:11593373-11593392 None:intergenic 15.0%
!!! TTATTAATAATTTTTTTCCC+AGG + chr1_2:11593372-11593391 Msa0056090:intron 15.0%
!!! ATGCTATCATTTTTTTTATT+AGG + chr1_2:11593834-11593853 Msa0056090:intron 15.0%
!!! TGCTATCATTTTTTTTATTA+GGG + chr1_2:11593835-11593854 Msa0056090:intron 15.0%
!! AAGAAGAATTTGAATTTAAA+TGG - chr1_2:11593960-11593979 None:intergenic 15.0%
!!! TTTTATTGGTAAAAATTCAT+AGG - chr1_2:11595734-11595753 None:intergenic 15.0%
!!! TTATATTGTTGTTTTATCTA+TGG + chr1_2:11595875-11595894 Msa0056090:intron 15.0%
!! TTGAAAAAATTCAAAACATT+TGG - chr1_2:11596177-11596196 None:intergenic 15.0%
!!! AATGTTTTGAATTTTTTCAA+TGG + chr1_2:11596177-11596196 Msa0056090:intron 15.0%
!!! TCAATATTTAAAACCAAATT+AGG - chr1_2:11596393-11596412 None:intergenic 15.0%
!!! ATAAAACAAAAATTTTTGTG+AGG + chr1_2:11596758-11596777 Msa0056090:intron 15.0%
!!! AACATCTCATTTTATTTTTT+AGG + chr1_2:11596786-11596805 Msa0056090:intron 15.0%
!!! ACATCTCATTTTATTTTTTA+GGG + chr1_2:11596787-11596806 Msa0056090:intron 15.0%
!!! TCAAATTTTGATGTATTTAT+AGG + chr1_2:11596817-11596836 Msa0056090:intron 15.0%
!!! CAAATTTTGATGTATTTATA+GGG + chr1_2:11596818-11596837 Msa0056090:intron 15.0%
!! AAACTAGATTAAAAGATTAA+GGG - chr1_2:11596861-11596880 None:intergenic 15.0%
!! AAAACTAGATTAAAAGATTA+AGG - chr1_2:11596862-11596881 None:intergenic 15.0%
!! TTTAATAAAAGTTCCTATTA+AGG - chr1_2:11596925-11596944 None:intergenic 15.0%
!! AAAACATATTTCAATTGAAA+AGG - chr1_2:11597640-11597659 None:intergenic 15.0%
!! TGTGATATTTATTATGAAAT+TGG + chr1_2:11597969-11597988 Msa0056090:three_prime_UTR 15.0%
!! ACAAATAAAATTGTATTTGT+AGG - chr1_2:11598343-11598362 None:intergenic 15.0%
!!! TATTAGTTCTTAATCTTAAC+TGG + chr1_2:11582868-11582887 Msa0056090:intron 20.0%
!!! GAATTCTTATGTATTTTTCT+TGG + chr1_2:11582917-11582936 Msa0056090:intron 20.0%
!!! CTAATTTTGGATAAAAAAAG+TGG - chr1_2:11583262-11583281 None:intergenic 20.0%
!!! CACTTTTTTTATCCAAAATT+AGG + chr1_2:11583260-11583279 Msa0056090:intron 20.0%
!! ACAGAAATAATTATTATCTG+CGG + chr1_2:11583724-11583743 Msa0056090:intron 20.0%
!! AATATGAAAGTGAATCTAAT+AGG - chr1_2:11584007-11584026 None:intergenic 20.0%
!! AACAAAATTAATCAAACAAG+TGG - chr1_2:11584250-11584269 None:intergenic 20.0%
!! GCTAAAAAATATAAATCTGA+CGG - chr1_2:11584280-11584299 None:intergenic 20.0%
!! TGTTCTCAAAAAGAAAAAAA+AGG + chr1_2:11584376-11584395 Msa0056090:intron 20.0%
!! TATGGATAAAAGAAGAAAAT+TGG + chr1_2:11584772-11584791 Msa0056090:intron 20.0%
!! TCTGATTATATAACTGTAAT+GGG + chr1_2:11584881-11584900 Msa0056090:intron 20.0%
!! AAACAAGTTCCTAAAATTAT+GGG - chr1_2:11585040-11585059 None:intergenic 20.0%
!! AAAACAAGTTCCTAAAATTA+TGG - chr1_2:11585041-11585060 None:intergenic 20.0%
!!! CAGAAGAAGAAATATATTTT+TGG + chr1_2:11585432-11585451 Msa0056090:intron 20.0%
!!! GAAGAAGAAATATATTTTTG+GGG + chr1_2:11585434-11585453 Msa0056090:intron 20.0%
!!! AAGAAGAAATATATTTTTGG+GGG + chr1_2:11585435-11585454 Msa0056090:intron 20.0%
!! CCATAAGAAAATAAATGAAA+CGG - chr1_2:11585994-11586013 None:intergenic 20.0%
!! AACAAAAATGTAACATAAAG+TGG - chr1_2:11586265-11586284 None:intergenic 20.0%
!! TTAGAATAAAAGAAAGACTA+TGG + chr1_2:11586367-11586386 Msa0056090:intron 20.0%
!! ATATCTTATGTATCTTTAGA+AGG + chr1_2:11586579-11586598 Msa0056090:intron 20.0%
!! ATTAATCAATACAATCAAGA+GGG + chr1_2:11586816-11586835 Msa0056090:intron 20.0%
!! AATAGTGATTTAAAGATGAA+GGG - chr1_2:11587294-11587313 None:intergenic 20.0%
!! TAATAGTGATTTAAAGATGA+AGG - chr1_2:11587295-11587314 None:intergenic 20.0%
!!! ATATGTTTTGTTAAATAGTG+GGG + chr1_2:11587387-11587406 Msa0056090:intron 20.0%
!!! AACGTGAATGAAATTTTATA+TGG + chr1_2:11587413-11587432 Msa0056090:intron 20.0%
!!! TTATATGGACTAAATTTCAA+TGG + chr1_2:11587428-11587447 Msa0056090:intron 20.0%
!!! TTCAATGGTTCTTATTTTAT+AGG + chr1_2:11587443-11587462 Msa0056090:intron 20.0%
!!! TCAATGGTTCTTATTTTATA+GGG + chr1_2:11587444-11587463 Msa0056090:intron 20.0%
!!! ACTTGTGTAGTTTTATAATA+TGG + chr1_2:11587556-11587575 Msa0056090:intron 20.0%
!!! CACAATCTCTTATATTTTTT+TGG + chr1_2:11587619-11587638 Msa0056090:intron 20.0%
!! TATATTATTGTCAATTGTAG+TGG - chr1_2:11587852-11587871 None:intergenic 20.0%
!! CAGAGAAAATACATTATAAA+TGG - chr1_2:11587920-11587939 None:intergenic 20.0%
!! AAAAAATCAATGTACGATAA+GGG - chr1_2:11588244-11588263 None:intergenic 20.0%
!! AAAAAAATCAATGTACGATA+AGG - chr1_2:11588245-11588264 None:intergenic 20.0%
!!! TTAATAATATCTTCTAGGAA+AGG + chr1_2:11588436-11588455 Msa0056090:intron 20.0%
!!! TTTTAAATGAACAAACTTAC+TGG - chr1_2:11588511-11588530 None:intergenic 20.0%
!!! AATATAAAATGTTGATTGAC+TGG - chr1_2:11588990-11589009 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + chr1_2:11589330-11589349 Msa0056090:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr1_2:11589426-11589445 Msa0056090:intron 20.0%
!!! TTGAAATGGATCAATTATTT+TGG + chr1_2:11589440-11589459 Msa0056090:intron 20.0%
!!! TGAAATGGATCAATTATTTT+GGG + chr1_2:11589441-11589460 Msa0056090:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr1_2:11589463-11589482 Msa0056090:intron 20.0%
!!! AACTGTTATTAATGCATTTT+TGG - chr1_2:11589628-11589647 None:intergenic 20.0%
!!! ATCAAGATTTTACGTAAAAT+CGG - chr1_2:11590094-11590113 None:intergenic 20.0%
!! AATTACCCATTTATACTTAT+CGG + chr1_2:11590167-11590186 Msa0056090:CDS 20.0%
!! GAACTATCAGAATAAAAAAT+GGG - chr1_2:11590261-11590280 None:intergenic 20.0%
!! AGAACTATCAGAATAAAAAA+TGG - chr1_2:11590262-11590281 None:intergenic 20.0%
!!! TGTCATTTAAAAACTTCATT+TGG + chr1_2:11590613-11590632 Msa0056090:intron 20.0%
!! AGTCATTTAAAAACTTCATT+TGG + chr1_2:11590675-11590694 Msa0056090:intron 20.0%
!! AAAAGCAGATTTGTATAAAA+TGG - chr1_2:11590787-11590806 None:intergenic 20.0%
!!! CTAGCTATATATATGTTTTA+TGG + chr1_2:11590841-11590860 Msa0056090:intron 20.0%
!!! TATTATTTTATGTTCTGTGT+TGG + chr1_2:11591098-11591117 Msa0056090:intron 20.0%
!! TACAAATATGTACACTATAT+GGG + chr1_2:11591169-11591188 Msa0056090:intron 20.0%
!! AATACTAGAAAAACTCAATT+GGG - chr1_2:11591249-11591268 None:intergenic 20.0%
!! TAATACTAGAAAAACTCAAT+TGG - chr1_2:11591250-11591269 None:intergenic 20.0%
!!! ATTCAAAGTTCTGTTTTTAA+AGG + chr1_2:11591280-11591299 Msa0056090:intron 20.0%
!!! TATTTTGTTTGCATTAGTAA+AGG + chr1_2:11591544-11591563 Msa0056090:CDS 20.0%
!!! AACATTATAATTTTTGTGAC+AGG + chr1_2:11591852-11591871 Msa0056090:intron 20.0%
!!! TTAAATGCTTTAAATAAGCA+TGG + chr1_2:11592657-11592676 Msa0056090:CDS 20.0%
!! GTGTTATGAAAATTATATAC+AGG + chr1_2:11593435-11593454 Msa0056090:CDS 20.0%
!! ATGAAAATTATATACAGGTA+TGG + chr1_2:11593440-11593459 Msa0056090:intron 20.0%
!! TAAATTCAAATTCTTCTTGA+TGG + chr1_2:11593962-11593981 Msa0056090:intron 20.0%
!! TTATCTACATAAGAAATTTG+AGG - chr1_2:11594008-11594027 None:intergenic 20.0%
!! TAGCAAAAAAAAAAAAACAG+AGG - chr1_2:11594465-11594484 None:intergenic 20.0%
!! CTTCAATATAAAGGAATTTA+AGG - chr1_2:11595213-11595232 None:intergenic 20.0%
!! TAAGTTCTTCTCTAATAATA+GGG - chr1_2:11595474-11595493 None:intergenic 20.0%
!! TTAAGTTCTTCTCTAATAAT+AGG - chr1_2:11595475-11595494 None:intergenic 20.0%
!!! TATAGACATATTTAGAACAT+AGG + chr1_2:11595849-11595868 Msa0056090:intron 20.0%
!! TAATATGTAAGAGAGAAATT+GGG - chr1_2:11596044-11596063 None:intergenic 20.0%
!! TTAATATGTAAGAGAGAAAT+TGG - chr1_2:11596045-11596064 None:intergenic 20.0%
!!! ACAATATTTTAAACCGAATT+AGG - chr1_2:11596440-11596459 None:intergenic 20.0%
!! CAAAATTCGCTATATTTATA+GGG - chr1_2:11596513-11596532 None:intergenic 20.0%
!! TCAAAATTCGCTATATTTAT+AGG - chr1_2:11596514-11596533 None:intergenic 20.0%
!! CATAATAAACGAACATAATT+TGG - chr1_2:11596673-11596692 None:intergenic 20.0%
!!! TAATCTAGTTTTGTTTCTAA+CGG + chr1_2:11596870-11596889 Msa0056090:intron 20.0%
!!! ATTAATATGGACTCTTTTAA+TGG - chr1_2:11596981-11597000 None:intergenic 20.0%
!! TCAATATGTTAAACCAAATT+AGG - chr1_2:11597032-11597051 None:intergenic 20.0%
!!! AACTTGTAAAGTTGATAAAT+AGG + chr1_2:11597594-11597613 Msa0056090:intron 20.0%
!!! ACTTGTAAAGTTGATAAATA+GGG + chr1_2:11597595-11597614 Msa0056090:intron 20.0%
!!! ACATTAGTCTCAAATTTTAA+CGG - chr1_2:11597748-11597767 None:intergenic 20.0%
!! AAAAATGTTGCTCTTAAAAT+TGG + chr1_2:11597911-11597930 Msa0056090:three_prime_UTR 20.0%
!!! TTTCTTTTTGGTGTAATATT+TGG + chr1_2:11598204-11598223 Msa0056090:three_prime_UTR 20.0%
!!! TTCTTTTTGGTGTAATATTT+GGG + chr1_2:11598205-11598224 Msa0056090:three_prime_UTR 20.0%
!! TATCTTTTCTTTTCTACCAT+AGG - chr1_2:11582533-11582552 None:intergenic 25.0%
! TGGTAGAAAAGAAAAGATAA+TGG + chr1_2:11582534-11582553 Msa0056090:intron 25.0%
!!! AAAAGATAATGGAAACAACT+TGG + chr1_2:11582545-11582564 Msa0056090:intron 25.0%
! AACATGTAGATTCTATAGTA+AGG + chr1_2:11582588-11582607 Msa0056090:intron 25.0%
!!! TATTAGCTCTAATTGAAAGT+GGG - chr1_2:11582757-11582776 None:intergenic 25.0%
!!! TTATTAGCTCTAATTGAAAG+TGG - chr1_2:11582758-11582777 None:intergenic 25.0%
! AAATAATAAATAGGACCAGA+GGG - chr1_2:11583017-11583036 None:intergenic 25.0%
! AAAATAATAAATAGGACCAG+AGG - chr1_2:11583018-11583037 None:intergenic 25.0%
! CAATGACAATTTAAAGAGAT+GGG + chr1_2:11583319-11583338 Msa0056090:CDS 25.0%
! TTAGGGTGATAAAACAATAT+TGG - chr1_2:11583423-11583442 None:intergenic 25.0%
! TGGATAGTAGTGTAAAAAAA+TGG - chr1_2:11583690-11583709 None:intergenic 25.0%
!! TTCTGTAAGAAAAGATTTTC+TGG - chr1_2:11583710-11583729 None:intergenic 25.0%
! CAGAAATAATTATTATCTGC+GGG + chr1_2:11583725-11583744 Msa0056090:intron 25.0%
!! ACAGTCATAAAAAACGTTTT+AGG + chr1_2:11583930-11583949 Msa0056090:CDS 25.0%
! ACATCTAGACATTAAGAAAA+TGG - chr1_2:11584172-11584191 None:intergenic 25.0%
! TATAGTAGGAATTTCATCAT+TGG - chr1_2:11584226-11584245 None:intergenic 25.0%
! AAGAAAGATTGAAAGATCAA+AGG + chr1_2:11584565-11584584 Msa0056090:CDS 25.0%
! AGAAAGATTGAAAGATCAAA+GGG + chr1_2:11584566-11584585 Msa0056090:CDS 25.0%
! TCTACATTAATGCTTTCTTA+TGG + chr1_2:11584754-11584773 Msa0056090:intron 25.0%
!!! AGAAAATTGGTTTGAATGAA+TGG + chr1_2:11584785-11584804 Msa0056090:intron 25.0%
!!! GAAAATTGGTTTGAATGAAT+GGG + chr1_2:11584786-11584805 Msa0056090:intron 25.0%
! GTCTGATTATATAACTGTAA+TGG + chr1_2:11584880-11584899 Msa0056090:intron 25.0%
!! TGTTAATATGCAAGTTGTTT+TGG + chr1_2:11584950-11584969 Msa0056090:intron 25.0%
!! ATGATCTAACATGGATTTTA+AGG - chr1_2:11585009-11585028 None:intergenic 25.0%
!! TATCCATTTCCCATAATTTT+AGG + chr1_2:11585028-11585047 Msa0056090:intron 25.0%
! TGAACAAAAATTAACACGAA+AGG + chr1_2:11585141-11585160 Msa0056090:CDS 25.0%
! AAATCAACATTTGGATATGA+AGG - chr1_2:11585236-11585255 None:intergenic 25.0%
! ATGGATAGTTGTTAAGATAA+GGG + chr1_2:11585407-11585426 Msa0056090:intron 25.0%
!! AAAGACTAGAATTAGTTTAG+TGG - chr1_2:11585656-11585675 None:intergenic 25.0%
!!! CGATTTTTTGAGAGTATATA+AGG - chr1_2:11585685-11585704 None:intergenic 25.0%
! AAAACAACATATAGTGCATA+AGG + chr1_2:11585793-11585812 Msa0056090:intron 25.0%
! AAAAGAAATTAGAAGAACTG+AGG + chr1_2:11585955-11585974 Msa0056090:CDS 25.0%
!!! CCGTTTCATTTATTTTCTTA+TGG + chr1_2:11585991-11586010 Msa0056090:intron 25.0%
! TTAAAAACTCAGCATAATGA+TGG - chr1_2:11586530-11586549 None:intergenic 25.0%
!! ATTAATCTTCCCTATTGATT+GGG - chr1_2:11586802-11586821 None:intergenic 25.0%
! GATTAATCAATACAATCAAG+AGG + chr1_2:11586815-11586834 Msa0056090:intron 25.0%
!!! TGTGTAGTTTTATAATATGG+TGG + chr1_2:11587559-11587578 Msa0056090:intron 25.0%
!!! TTTTTTTGGAAAATTGGGAT+AGG + chr1_2:11587633-11587652 Msa0056090:intron 25.0%
! TTTAACAGAATTATGATTGG+TGG - chr1_2:11588048-11588067 None:intergenic 25.0%
! ACCAATCATAATTCTGTTAA+AGG + chr1_2:11588047-11588066 Msa0056090:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr1_2:11589352-11589371 Msa0056090:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr1_2:11589462-11589481 Msa0056090:intron 25.0%
!! CATTAATAACAGTTTTCATG+TGG + chr1_2:11589634-11589653 Msa0056090:intron 25.0%
!! AGTATTTCAAGTGTGATTTA+AGG + chr1_2:11589936-11589955 Msa0056090:intron 25.0%
! TACATGCATTTAAATTGCAT+AGG - chr1_2:11589976-11589995 None:intergenic 25.0%
!! ATTTTACGTAAAATCGGAAA+GGG - chr1_2:11590088-11590107 None:intergenic 25.0%
! ATTACCCATTTATACTTATC+GGG + chr1_2:11590168-11590187 Msa0056090:CDS 25.0%
! CAGAATAAAAAATGGGAAAA+GGG - chr1_2:11590254-11590273 None:intergenic 25.0%
! TCAGAATAAAAAATGGGAAA+AGG - chr1_2:11590255-11590274 None:intergenic 25.0%
!! ACATGAAAGTGTGAATAAAA+GGG - chr1_2:11590360-11590379 None:intergenic 25.0%
!! TACATGAAAGTGTGAATAAA+AGG - chr1_2:11590361-11590380 None:intergenic 25.0%
! CTGTTTAAGGAAATTATTAC+AGG - chr1_2:11590411-11590430 None:intergenic 25.0%
! CTGTAATAATTTCCTTAAAC+AGG + chr1_2:11590409-11590428 Msa0056090:intron 25.0%
!!! TTAAAAACTTCATTTGGTGT+AGG + chr1_2:11590619-11590638 Msa0056090:intron 25.0%
! CACAAATGACAAATAATAGT+TGG - chr1_2:11590815-11590834 None:intergenic 25.0%
!! CAACTATTATTTGTCATTTG+TGG + chr1_2:11590813-11590832 Msa0056090:intron 25.0%
! ATTTCTTACTTCCTAAAAGA+TGG + chr1_2:11591146-11591165 Msa0056090:intron 25.0%
!! ACATATTTGTACCATCTTTT+AGG - chr1_2:11591160-11591179 None:intergenic 25.0%
! GTACAAATATGTACACTATA+TGG + chr1_2:11591168-11591187 Msa0056090:intron 25.0%
!!! AAAGTTCTGTTTTTAAAGGT+TGG + chr1_2:11591284-11591303 Msa0056090:intron 25.0%
!!! AAGTTCTGTTTTTAAAGGTT+GGG + chr1_2:11591285-11591304 Msa0056090:intron 25.0%
!!! ATTTTGAAATATATGACCGA+TGG + chr1_2:11591347-11591366 Msa0056090:CDS 25.0%
!!! TTTTCAATGACTCTTGTTTT+TGG + chr1_2:11591727-11591746 Msa0056090:intron 25.0%
!! CTCCAATATTTAAAATTCCA+GGG + chr1_2:11591962-11591981 Msa0056090:CDS 25.0%
! GATATATTGATATTCCTTAC+TGG + chr1_2:11592090-11592109 Msa0056090:CDS 25.0%
! ATAAAATATGTCATTGATCC+AGG + chr1_2:11592318-11592337 Msa0056090:CDS 25.0%
! AAAAGTTATAATCCAAAGAC+AGG + chr1_2:11592354-11592373 Msa0056090:CDS 25.0%
!! ATCAATACCAAGACATTTTA+AGG - chr1_2:11592562-11592581 None:intergenic 25.0%
!!! ACTATCATTTTTGACAACAT+AGG - chr1_2:11592729-11592748 None:intergenic 25.0%
! TATGTTGTCAAAAATGATAG+TGG + chr1_2:11592728-11592747 Msa0056090:CDS 25.0%
!! CTTTTGAATTTGTGTTTAGT+TGG + chr1_2:11592924-11592943 Msa0056090:intron 25.0%
! GGAAAAGAGAATAATAAGAA+CGG + chr1_2:11593037-11593056 Msa0056090:intron 25.0%
! AAGACTTAATCCCTATTTAT+AGG + chr1_2:11593105-11593124 Msa0056090:intron 25.0%
! AGACTTAATCCCTATTTATA+GGG + chr1_2:11593106-11593125 Msa0056090:intron 25.0%
!!! TTTTGATTTGGTCTTGATTT+AGG - chr1_2:11593147-11593166 None:intergenic 25.0%
! GTAAATCAAATCATGAGATA+CGG + chr1_2:11593257-11593276 Msa0056090:intron 25.0%
! CTCTCATTATTTATATCTTG+AGG + chr1_2:11593796-11593815 Msa0056090:intron 25.0%
! TATCTTGAGGTTATTTAAGA+TGG + chr1_2:11593809-11593828 Msa0056090:intron 25.0%
!! ATCTTGAGGTTATTTAAGAT+GGG + chr1_2:11593810-11593829 Msa0056090:intron 25.0%
! ATTTACAATTCTAAGTACTC+GGG - chr1_2:11594078-11594097 None:intergenic 25.0%
! CATTTACAATTCTAAGTACT+CGG - chr1_2:11594079-11594098 None:intergenic 25.0%
! TAGCAAAAAAACAAAAACAG+AGG - chr1_2:11594170-11594189 None:intergenic 25.0%
! NNNNNNNNNNTCAAGGTCTC+AGG - chr1_2:11594230-11594249 None:intergenic 25.0%
! ATTTACAATTCTAAGTACTC+GGG - chr1_2:11594078-11594097 None:intergenic 25.0%
! CATTTACAATTCTAAGTACT+CGG - chr1_2:11594079-11594098 None:intergenic 25.0%
! CTTTAGTTAAAGTGAAACTT+GGG - chr1_2:11594616-11594635 None:intergenic 25.0%
! TCTTTAGTTAAAGTGAAACT+TGG - chr1_2:11594617-11594636 None:intergenic 25.0%
!! TTTTATGGGGTTAATATTTG+TGG + chr1_2:11594694-11594713 Msa0056090:intron 25.0%
! TTGAATCAGCATTATGAAAA+AGG - chr1_2:11594903-11594922 None:intergenic 25.0%
!!! GTTGTGTTAGTTCTATTTTT+GGG - chr1_2:11595111-11595130 None:intergenic 25.0%
!!! AGTTGTGTTAGTTCTATTTT+TGG - chr1_2:11595112-11595131 None:intergenic 25.0%
! TTATCTTACAAACTGGATTT+AGG - chr1_2:11595167-11595186 None:intergenic 25.0%
! TAAATCCAGTTTGTAAGATA+AGG + chr1_2:11595166-11595185 Msa0056090:intron 25.0%
! AAATCCAGTTTGTAAGATAA+GGG + chr1_2:11595167-11595186 Msa0056090:intron 25.0%
! CAATTGCAACTTCAATATAA+AGG - chr1_2:11595222-11595241 None:intergenic 25.0%
! TTGAAATGAGATGAAGAAAA+TGG - chr1_2:11595350-11595369 None:intergenic 25.0%
! AAGTTCTTCTCTAATAATAG+GGG - chr1_2:11595473-11595492 None:intergenic 25.0%
! ACTTAGAACTAGTTAGTTAA+GGG + chr1_2:11595510-11595529 Msa0056090:intron 25.0%
! TTCAATATAGATAACCCAAA+TGG + chr1_2:11595779-11595798 Msa0056090:intron 25.0%
! CATCACAATTTAGTTGAAAA+GGG + chr1_2:11595901-11595920 Msa0056090:intron 25.0%
! TATATTCTTATTGCAGATCA+CGG + chr1_2:11596227-11596246 Msa0056090:intron 25.0%
!! AAATATTGTGATCCTTTTGT+AGG + chr1_2:11596451-11596470 Msa0056090:intron 25.0%
!! AATATTGTGATCCTTTTGTA+GGG + chr1_2:11596452-11596471 Msa0056090:intron 25.0%
! ATTAATTCATTCCCTACAAA+AGG - chr1_2:11596466-11596485 None:intergenic 25.0%
! TAGGGAATGAATTAATCTTT+GGG + chr1_2:11596470-11596489 Msa0056090:intron 25.0%
! TGAATATAAAGTGGTCATTA+AGG - chr1_2:11596608-11596627 None:intergenic 25.0%
! ACATTCACATGAATATAAAG+TGG - chr1_2:11596617-11596636 None:intergenic 25.0%
!!! GTTTTATTTTTGGTCTCTAA+TGG - chr1_2:11596745-11596764 None:intergenic 25.0%
! ACAATGACTGTACATTAATA+TGG - chr1_2:11596994-11597013 None:intergenic 25.0%
! ATATTAATGTACAGTCATTG+TGG + chr1_2:11596993-11597012 Msa0056090:intron 25.0%
!! ATGCTTTTAGATTCCTAATT+TGG + chr1_2:11597016-11597035 Msa0056090:intron 25.0%
!! ACATATTGACATCCTTTTAT+AGG + chr1_2:11597043-11597062 Msa0056090:intron 25.0%
!!! AATGGTAGTTTTGTTTCTAA+TGG + chr1_2:11597082-11597101 Msa0056090:intron 25.0%
! TACAAAATTCTTCATTTGCA+GGG - chr1_2:11597206-11597225 None:intergenic 25.0%
! TTACAAAATTCTTCATTTGC+AGG - chr1_2:11597207-11597226 None:intergenic 25.0%
! TACTTTGGGCTTATAAATTA+GGG - chr1_2:11597231-11597250 None:intergenic 25.0%
! TGTGTGTAATTATCTACTTT+GGG - chr1_2:11597245-11597264 None:intergenic 25.0%
! GAAATCAATTTAGATTGTTG+TGG + chr1_2:11597412-11597431 Msa0056090:intron 25.0%
! AATTTAGATTGTTGTGGAAT+TGG + chr1_2:11597418-11597437 Msa0056090:intron 25.0%
! AAACTTTGATACTAATGTCT+TGG - chr1_2:11597555-11597574 None:intergenic 25.0%
! AAGTTAGTTGAAGTTATACA+GGG - chr1_2:11597579-11597598 None:intergenic 25.0%
!!! TAAAGTTGATAAATAGGGAA+AGG + chr1_2:11597600-11597619 Msa0056090:intron 25.0%
!!! AAAGTTGATAAATAGGGAAA+GGG + chr1_2:11597601-11597620 Msa0056090:intron 25.0%
!!! ATTGACAGTTTTAAATTTGC+TGG + chr1_2:11597690-11597709 Msa0056090:intron 25.0%
! TGCCATTCAAAAAAAAGAAT+TGG + chr1_2:11598258-11598277 Msa0056090:three_prime_UTR 25.0%
!!! CACCAATTCTTTTTTTTGAA+TGG - chr1_2:11598263-11598282 None:intergenic 25.0%
! CATTCAAAAAAAAGAATTGG+TGG + chr1_2:11598261-11598280 Msa0056090:three_prime_UTR 25.0%
TAGATTCTATAGTAAGGAGA+TGG + chr1_2:11582594-11582613 Msa0056090:intron 30.0%
! TAATTAGTTTAGGTCTTCCT+CGG - chr1_2:11582652-11582671 None:intergenic 30.0%
CCTTAAAAACACACATAAAC+TGG - chr1_2:11582846-11582865 None:intergenic 30.0%
!! CCAGTTTATGTGTGTTTTTA+AGG + chr1_2:11582843-11582862 Msa0056090:intron 30.0%
CAAAAATAAAATACTCCCTC+TGG + chr1_2:11582999-11583018 Msa0056090:intron 30.0%
!!! CATTTTTTAACATGATGGTC+TGG + chr1_2:11583235-11583254 Msa0056090:intron 30.0%
TTTATTCCTTGCAGTGAAAA+TGG + chr1_2:11583292-11583311 Msa0056090:intron 30.0%
GCAATGACAATTTAAAGAGA+TGG + chr1_2:11583318-11583337 Msa0056090:CDS 30.0%
ATGATGTACTGTACAATTGT+GGG - chr1_2:11583383-11583402 None:intergenic 30.0%
AATGATGTACTGTACAATTG+TGG - chr1_2:11583384-11583403 None:intergenic 30.0%
ACAATTGTACAGTACATCAT+TGG + chr1_2:11583383-11583402 Msa0056090:CDS 30.0%
!! TCATTTTGGAAACGTTGTTT+TGG + chr1_2:11583459-11583478 Msa0056090:intron 30.0%
!! CATTTTGGAAACGTTGTTTT+GGG + chr1_2:11583460-11583479 Msa0056090:intron 30.0%
GATAATGACCATATTGTTAG+TGG + chr1_2:11583860-11583879 Msa0056090:CDS 30.0%
TATCATCACCACTAACAATA+TGG - chr1_2:11583871-11583890 None:intergenic 30.0%
!!! AAACGTTTTTTATGACTGTC+TGG - chr1_2:11583929-11583948 None:intergenic 30.0%
ATCAAACAAGTGGATATAGT+AGG - chr1_2:11584240-11584259 None:intergenic 30.0%
GCAAAGAAAGAAACAAACAA+AGG - chr1_2:11584443-11584462 None:intergenic 30.0%
TAGACAAGTAATCACATCAA+GGG - chr1_2:11584527-11584546 None:intergenic 30.0%
ATAGACAAGTAATCACATCA+AGG - chr1_2:11584528-11584547 None:intergenic 30.0%
ATTGAAAGATCAAAGGGAAA+AGG + chr1_2:11584572-11584591 Msa0056090:CDS 30.0%
CATTAGTAGTCGGATTTATT+TGG + chr1_2:11584650-11584669 Msa0056090:intron 30.0%
ATTTGGTCAATTGTACTTGA+AGG + chr1_2:11584667-11584686 Msa0056090:intron 30.0%
CACTGGAAGAAACATTTAAT+GGG - chr1_2:11584932-11584951 None:intergenic 30.0%
ACACTGGAAGAAACATTTAA+TGG - chr1_2:11584933-11584952 None:intergenic 30.0%
AACAACTTGCATATTAACAC+TGG - chr1_2:11584949-11584968 None:intergenic 30.0%
GAAATGGATATGATCTAACA+TGG - chr1_2:11585018-11585037 None:intergenic 30.0%
GTTCCTAAAATTATGGGAAA+TGG - chr1_2:11585034-11585053 None:intergenic 30.0%
AAATTAACACGAAAGGAAGA+AGG + chr1_2:11585148-11585167 Msa0056090:CDS 30.0%
CTTAACAACTATCCATCAAA+AGG - chr1_2:11585403-11585422 None:intergenic 30.0%
GATGGATAGTTGTTAAGATA+AGG + chr1_2:11585406-11585425 Msa0056090:intron 30.0%
! TAGAATTAGTTTAGTGGTGA+GGG - chr1_2:11585650-11585669 None:intergenic 30.0%
ATACTCTCAAAAAATCGTCT+AGG + chr1_2:11585688-11585707 Msa0056090:intron 30.0%
! AGATGGAGTTGTTGAAATTT+TGG + chr1_2:11585732-11585751 Msa0056090:intron 30.0%
AGAATACTTGAAGAAAAGAG+AGG + chr1_2:11585932-11585951 Msa0056090:CDS 30.0%
GATGAGCAATATCTATTTGA+AGG + chr1_2:11586164-11586183 Msa0056090:CDS 30.0%
!!! GCTTGACACTACTTTTTATA+GGG - chr1_2:11586304-11586323 None:intergenic 30.0%
AAGCATTTCCTTTACAGAAT+TGG - chr1_2:11586326-11586345 None:intergenic 30.0%
! TTTGTTAAGAGGCATAATGA+TGG - chr1_2:11586430-11586449 None:intergenic 30.0%
! TTTCAAACCTGTTTGTTAAG+AGG - chr1_2:11586441-11586460 None:intergenic 30.0%
ATCTAGTTAAATAGACAGAC+AGG + chr1_2:11586460-11586479 Msa0056090:intron 30.0%
GGCAGAATGTACATTTATAT+AGG + chr1_2:11586756-11586775 Msa0056090:intron 30.0%
GAATGTACATTTATATAGGC+AGG + chr1_2:11586760-11586779 Msa0056090:intron 30.0%
TAGTTAATCCCCAATCAATA+GGG + chr1_2:11586790-11586809 Msa0056090:intron 30.0%
! TTAATCTTCCCTATTGATTG+GGG - chr1_2:11586801-11586820 None:intergenic 30.0%
GATTAATCTTCCCTATTGAT+TGG - chr1_2:11586803-11586822 None:intergenic 30.0%
! CTTTTCTCTTTTTCTAGACA+AGG - chr1_2:11586971-11586990 None:intergenic 30.0%
AGAGAAAAGAAACATCTGTA+AGG + chr1_2:11586982-11587001 Msa0056090:intron 30.0%
!! AAAACAACTTGTTGTATCTC+TGG + chr1_2:11587077-11587096 Msa0056090:intron 30.0%
TGTTAGGGTTAAATATGTTG+CGG + chr1_2:11587252-11587271 Msa0056090:intron 30.0%
AAAGAAAAGGAAAAGGGAAT+CGG + chr1_2:11587873-11587892 Msa0056090:intron 30.0%
TTATCCCATGAATTTCCAAA+AGG + chr1_2:11587944-11587963 Msa0056090:intron 30.0%
!! AGTACCTTTTGGAAATTCAT+GGG - chr1_2:11587951-11587970 None:intergenic 30.0%
!! AAGTACCTTTTGGAAATTCA+TGG - chr1_2:11587952-11587971 None:intergenic 30.0%
! TAATAAAGGCAAGTACCTTT+TGG - chr1_2:11587962-11587981 None:intergenic 30.0%
!! AAAAGGTACTTGCCTTTATT+AGG + chr1_2:11587961-11587980 Msa0056090:intron 30.0%
TGCTATCTTGTATTAAGAGT+TGG + chr1_2:11587999-11588018 Msa0056090:intron 30.0%
GCTATCTTGTATTAAGAGTT+GGG + chr1_2:11588000-11588019 Msa0056090:intron 30.0%
GCCTTTAACAGAATTATGAT+TGG - chr1_2:11588051-11588070 None:intergenic 30.0%
!! TACGATAAGGGTATTAGAAA+GGG - chr1_2:11588232-11588251 None:intergenic 30.0%
!! AGAACAGGGATTTATTTTCT+CGG - chr1_2:11588388-11588407 None:intergenic 30.0%
GAAAACAAACGAAAAGAACA+GGG - chr1_2:11588402-11588421 None:intergenic 30.0%
TGAAAACAAACGAAAAGAAC+AGG - chr1_2:11588403-11588422 None:intergenic 30.0%
!!! AGAGGCTTGCTTTTTATTTT+TGG - chr1_2:11588480-11588499 None:intergenic 30.0%
CGCAATGTTATATTGTAATC+TGG + chr1_2:11588541-11588560 Msa0056090:intron 30.0%
! TCAGTGTGCTTTTATTCTTT+AGG + chr1_2:11588602-11588621 Msa0056090:intron 30.0%
ATGCCTTGATAAAATCGATT+TGG - chr1_2:11588729-11588748 None:intergenic 30.0%
!! AATCGATTTTATCAAGGCAT+CGG + chr1_2:11588729-11588748 Msa0056090:CDS 30.0%
!!! TTTAGTTTTAGTAGCTCTAC+AGG + chr1_2:11588954-11588973 Msa0056090:intron 30.0%
!! ATCAGTTTTCAGTTACTTTG+TGG + chr1_2:11589141-11589160 Msa0056090:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr1_2:11589337-11589356 Msa0056090:intron 30.0%
GAGTAGCAAAGATAATCAAA+GGG + chr1_2:11589507-11589526 Msa0056090:intron 30.0%
AGTAGCAAAGATAATCAAAG+GGG + chr1_2:11589508-11589527 Msa0056090:intron 30.0%
TTGACCCGTATTAATATACT+AGG + chr1_2:11589549-11589568 Msa0056090:intron 30.0%
TGACCCGTATTAATATACTA+GGG + chr1_2:11589550-11589569 Msa0056090:intron 30.0%
TCTCCCCTAGTATATTAATA+CGG - chr1_2:11589557-11589576 None:intergenic 30.0%
!! TGCATTTTTGGATATCTCAA+AGG - chr1_2:11589616-11589635 None:intergenic 30.0%
! TAACAGTTTTCATGTGGTAT+AGG + chr1_2:11589640-11589659 Msa0056090:intron 30.0%
AGAATCGTTTCAAAGAAAAG+TGG - chr1_2:11589698-11589717 None:intergenic 30.0%
TTGAAACGATTCTACGATTA+TGG + chr1_2:11589705-11589724 Msa0056090:intron 30.0%
! GATTTTACGTAAAATCGGAA+AGG - chr1_2:11590089-11590108 None:intergenic 30.0%
AAAAGGGAAGAGATTGAAAA+GGG - chr1_2:11590238-11590257 None:intergenic 30.0%
AAGTGTGAATAAAAGGGTAA+TGG - chr1_2:11590354-11590373 None:intergenic 30.0%
CAATTACAAGTACCTGTTTA+AGG - chr1_2:11590424-11590443 None:intergenic 30.0%
AAACAGGTACTTGTAATTGT+TGG + chr1_2:11590425-11590444 Msa0056090:intron 30.0%
CATAATAACTTCAGAAGATG+GGG - chr1_2:11590915-11590934 None:intergenic 30.0%
GCATAATAACTTCAGAAGAT+GGG - chr1_2:11590916-11590935 None:intergenic 30.0%
!! GTTCTGTGTTGGTTATAATA+TGG + chr1_2:11591109-11591128 Msa0056090:intron 30.0%
AAAACTCAATTGGGAAAAAG+AGG - chr1_2:11591240-11591259 None:intergenic 30.0%
ATGTTACTGAGAGAATTTCT+TGG + chr1_2:11591371-11591390 Msa0056090:CDS 30.0%
CTAATATTGTAGTGTTGTGA+TGG + chr1_2:11591487-11591506 Msa0056090:intron 30.0%
TCAACTCACTTGGATTATAA+AGG - chr1_2:11591597-11591616 None:intergenic 30.0%
! TATAATCCAAGTGAGTTGAA+TGG + chr1_2:11591598-11591617 Msa0056090:intron 30.0%
! ATCAAGATACTGATTGTTCA+AGG - chr1_2:11591645-11591664 None:intergenic 30.0%
! TGTATTTAAAGCATGTGCTT+AGG + chr1_2:11591796-11591815 Msa0056090:intron 30.0%
! GCTCCAATATTTAAAATTCC+AGG + chr1_2:11591961-11591980 Msa0056090:CDS 30.0%
! CTCCCTGGAATTTTAAATAT+TGG - chr1_2:11591967-11591986 None:intergenic 30.0%
! TATTTAAAATTCCAGGGAGA+AGG + chr1_2:11591968-11591987 Msa0056090:CDS 30.0%
AGGAATATCAATATATCTCC+AGG - chr1_2:11592087-11592106 None:intergenic 30.0%
TGGTCAAGAAGAAATTGAAA+CGG + chr1_2:11592110-11592129 Msa0056090:CDS 30.0%
!!! ATTTTAGCTTGTAGTTCAGT+TGG - chr1_2:11592219-11592238 None:intergenic 30.0%
! CAATGATGTTTCTGCAATAT+TGG - chr1_2:11592286-11592305 None:intergenic 30.0%
GAAACATCATTGACAATTGA+TGG + chr1_2:11592294-11592313 Msa0056090:CDS 30.0%
TTATAATCCAAAGACAGGAA+TGG + chr1_2:11592359-11592378 Msa0056090:CDS 30.0%
AATTGTATGCAGTATACAAC+CGG - chr1_2:11592470-11592489 None:intergenic 30.0%
!! GTTTTGACCTTAAAATGTCT+TGG + chr1_2:11592552-11592571 Msa0056090:CDS 30.0%
CTTGTTGCACTTTGAATTTA+TGG + chr1_2:11592584-11592603 Msa0056090:CDS 30.0%
!! AATTTTCACTCTGGAAATGT+TGG + chr1_2:11592870-11592889 Msa0056090:CDS 30.0%
AGACCAATTATTCAACACAA+TGG + chr1_2:11593413-11593432 Msa0056090:CDS 30.0%
ACACCATTGTGTTGAATAAT+TGG - chr1_2:11593419-11593438 None:intergenic 30.0%
GACTTCACTTATTAACGTAA+AGG - chr1_2:11593488-11593507 None:intergenic 30.0%
TACGTTAATAAGTGAAGTCA+TGG + chr1_2:11593489-11593508 Msa0056090:intron 30.0%
TGAAGTCATGGAAATAATAG+TGG + chr1_2:11593501-11593520 Msa0056090:intron 30.0%
! AATAATAGTGGAGGAAATCA+AGG + chr1_2:11593513-11593532 Msa0056090:intron 30.0%
ACAGTCAATAAGGATAATAG+GGG - chr1_2:11593697-11593716 None:intergenic 30.0%
CACAGTCAATAAGGATAATA+GGG - chr1_2:11593698-11593717 None:intergenic 30.0%
!!! AGTGGTTATTTTTTTGTGCT+TGG + chr1_2:11593742-11593761 Msa0056090:intron 30.0%
! TACATAAGAAATTTGAGGCA+GGG - chr1_2:11594003-11594022 None:intergenic 30.0%
CGAGTACTTAGAATTGTAAA+TGG + chr1_2:11594077-11594096 Msa0056090:intron 30.0%
CGAGTACTTAGAATTGTAAA+TGG + chr1_2:11594077-11594096 Msa0056090:intron 30.0%
ATGAAATAAGAAACCCACTT+GGG - chr1_2:11594582-11594601 None:intergenic 30.0%
! TGGGTTTCTTATTTCATGTT+GGG + chr1_2:11594585-11594604 Msa0056090:intron 30.0%
TATTAACCCCATAAAATCGA+GGG - chr1_2:11594690-11594709 None:intergenic 30.0%
ATATTAACCCCATAAAATCG+AGG - chr1_2:11594691-11594710 None:intergenic 30.0%
!!! GTGGTGTTATTTTGATGTTT+AGG + chr1_2:11594713-11594732 Msa0056090:intron 30.0%
! TTAGGTAAGAAGTATGAAAC+AGG + chr1_2:11594731-11594750 Msa0056090:intron 30.0%
AGATGCTATAGATTTCTTGA+TGG - chr1_2:11594838-11594857 None:intergenic 30.0%
ATCAAGAAATCTATAGCATC+TGG + chr1_2:11594837-11594856 Msa0056090:CDS 30.0%
! ATTCAATTTTTAACGACTGC+AGG + chr1_2:11594917-11594936 Msa0056090:intron 30.0%
ACTGCAAAATTGCACAAAAA+CGG + chr1_2:11594953-11594972 Msa0056090:CDS 30.0%
!! TTTTGAGTATCTTAGATCTC+AGG + chr1_2:11595069-11595088 Msa0056090:intron 30.0%
TTTAATACACCCTCTTTCAT+TGG + chr1_2:11595407-11595426 Msa0056090:intron 30.0%
GACTTAGAACTAGTTAGTTA+AGG + chr1_2:11595509-11595528 Msa0056090:intron 30.0%
AGTATCATTCTTCTCCATTT+GGG - chr1_2:11595796-11595815 None:intergenic 30.0%
AAGTATCATTCTTCTCCATT+TGG - chr1_2:11595797-11595816 None:intergenic 30.0%
TGAAGAACTGATACGAAAAA+CGG + chr1_2:11595816-11595835 Msa0056090:intron 30.0%
! CCTTTTCAACTAAATTGTGA+TGG - chr1_2:11595903-11595922 None:intergenic 30.0%
CCATCACAATTTAGTTGAAA+AGG + chr1_2:11595900-11595919 Msa0056090:intron 30.0%
CAATTTAGTTGAAAAGGGTT+TGG + chr1_2:11595906-11595925 Msa0056090:intron 30.0%
!!! GAATTTTTTCAATGGATGCT+CGG + chr1_2:11596185-11596204 Msa0056090:intron 30.0%
!!! AATTTTTTCAATGGATGCTC+GGG + chr1_2:11596186-11596205 Msa0056090:intron 30.0%
ATACTGTCTTCAAGATCATT+GGG - chr1_2:11596300-11596319 None:intergenic 30.0%
AAACCAAATTAGGAACCTAA+GGG - chr1_2:11596383-11596402 None:intergenic 30.0%
AAAACCAAATTAGGAACCTA+AGG - chr1_2:11596384-11596403 None:intergenic 30.0%
GTAGGGAATGAATTAATCTT+TGG + chr1_2:11596469-11596488 Msa0056090:intron 30.0%
ATAAATGAGGTGTACATTTG+AGG + chr1_2:11596954-11596973 Msa0056090:intron 30.0%
TAAATGAGGTGTACATTTGA+GGG + chr1_2:11596955-11596974 Msa0056090:intron 30.0%
TAGAAACAAAACTACCATTG+TGG - chr1_2:11597081-11597100 None:intergenic 30.0%
TTGTACTACTAACTCAGTTT+AGG + chr1_2:11597150-11597169 Msa0056090:intron 30.0%
TGTACTACTAACTCAGTTTA+GGG + chr1_2:11597151-11597170 Msa0056090:intron 30.0%
CTACTTTGGGCTTATAAATT+AGG - chr1_2:11597232-11597251 None:intergenic 30.0%
GTGTGTGTAATTATCTACTT+TGG - chr1_2:11597246-11597265 None:intergenic 30.0%
ATGAATATTCTGGTAAGGAT+AGG - chr1_2:11597279-11597298 None:intergenic 30.0%
ATTGTTGTGGAATTGGAAAA+AGG + chr1_2:11597425-11597444 Msa0056090:intron 30.0%
TGTTTAACAGAATGGATATG+TGG + chr1_2:11597457-11597476 Msa0056090:intron 30.0%
! AAGATTGGTTAGAACAATTC+AGG + chr1_2:11597486-11597505 Msa0056090:intron 30.0%
CAAGTTAGTTGAAGTTATAC+AGG - chr1_2:11597580-11597599 None:intergenic 30.0%
CAACAACTCAAATAGATGAA+GGG - chr1_2:11597784-11597803 None:intergenic 30.0%
TCAACAACTCAAATAGATGA+AGG - chr1_2:11597785-11597804 None:intergenic 30.0%
TTGAAGGAACAAATCATTGT+CGG + chr1_2:11598099-11598118 Msa0056090:three_prime_UTR 30.0%
!!! ATTTGTGGTTTTGATCAGTG+TGG - chr1_2:11582195-11582214 None:intergenic 35.0%
CACTGATCAAAACCACAAAT+TGG + chr1_2:11582195-11582214 Msa0056090:five_prime_UTR 35.0%
AGAGAGTAAAATGCAATACC+TGG - chr1_2:11582296-11582315 None:intergenic 35.0%
CAACAAACTATAACTCTCTC+TGG - chr1_2:11582374-11582393 None:intergenic 35.0%
! TGAAAAGAAGCGTATGTCTA+GGG - chr1_2:11582482-11582501 None:intergenic 35.0%
! ATTTGGGTTACTAACACCTA+TGG + chr1_2:11582514-11582533 Msa0056090:intron 35.0%
TAATGGAAACAACTTGGCTT+AGG + chr1_2:11582551-11582570 Msa0056090:intron 35.0%
! TAGAGATCAATGAGTTGAGA+TGG + chr1_2:11582690-11582709 Msa0056090:intron 35.0%
AGAGCTAATAATACGATACG+TGG + chr1_2:11582767-11582786 Msa0056090:intron 35.0%
!! ATACGTGGTAGTGTTTTTCT+TGG + chr1_2:11582782-11582801 Msa0056090:intron 35.0%
GTATGACCTTTGTGAATGAT+TGG + chr1_2:11582890-11582909 Msa0056090:intron 35.0%
TCATGACCAATCATTCACAA+AGG - chr1_2:11582899-11582918 None:intergenic 35.0%
!!! AAAGTTTTAGTTAATCGGGC+CGG + chr1_2:11583051-11583070 Msa0056090:intron 35.0%
TAAAAATTTGTGTCCAAGCC+CGG - chr1_2:11583104-11583123 None:intergenic 35.0%
! CTGCTGATTGAGTTCTATTT+AGG + chr1_2:11583204-11583223 Msa0056090:intron 35.0%
AAATTTCTTCCACAAACGCA+CGG - chr1_2:11583598-11583617 None:intergenic 35.0%
GCAGTATATTCATTGTGTCT+TGG - chr1_2:11583668-11583687 None:intergenic 35.0%
TCAAGATGATCAAGAAGATG+AGG + chr1_2:11583967-11583986 Msa0056090:CDS 35.0%
AGGTAAGTTCAAGGAAAGAA+AGG + chr1_2:11584092-11584111 Msa0056090:intron 35.0%
GGTAAGTTCAAGGAAAGAAA+GGG + chr1_2:11584093-11584112 Msa0056090:intron 35.0%
ATTACCCTTGATGAAGATAG+TGG + chr1_2:11584136-11584155 Msa0056090:CDS 35.0%
TGAACCACTATCTTCATCAA+GGG - chr1_2:11584143-11584162 None:intergenic 35.0%
GAAACAAACAAAGGACTCTT+TGG - chr1_2:11584434-11584453 None:intergenic 35.0%
AATGAATGGGTGAAAATGTG+TGG + chr1_2:11584799-11584818 Msa0056090:intron 35.0%
! GGAAGAAACATTTAATGGGT+GGG - chr1_2:11584928-11584947 None:intergenic 35.0%
TGGAAGAAACATTTAATGGG+TGG - chr1_2:11584929-11584948 None:intergenic 35.0%
!!! ATGCAAGTTGTTTTGGCTTA+AGG + chr1_2:11584957-11584976 Msa0056090:intron 35.0%
!! ATGATGATATGTGCTGTTTG+AGG + chr1_2:11585320-11585339 Msa0056090:CDS 35.0%
!!! GTTTGAGGTTTGCTATTTTG+TGG + chr1_2:11585335-11585354 Msa0056090:intron 35.0%
! CACAAAATTCTGCCTTTTGA+TGG + chr1_2:11585388-11585407 Msa0056090:intron 35.0%
! AGAATTAGTTTAGTGGTGAG+GGG - chr1_2:11585649-11585668 None:intergenic 35.0%
! CTAGAATTAGTTTAGTGGTG+AGG - chr1_2:11585651-11585670 None:intergenic 35.0%
! TCAAAAAATCGTCTAGGACA+TGG + chr1_2:11585694-11585713 Msa0056090:intron 35.0%
GGTTTGGAAAAGACTTAAGA+TGG + chr1_2:11585715-11585734 Msa0056090:intron 35.0%
! TGGTTTTTGATATTACCCGT+CGG + chr1_2:11585752-11585771 Msa0056090:intron 35.0%
! TTAAGATACGCTTTTGATCG+CGG + chr1_2:11585846-11585865 Msa0056090:intron 35.0%
! CATTGACTGAAAATCAGAAC+TGG - chr1_2:11586023-11586042 None:intergenic 35.0%
!!! GGCTTGACACTACTTTTTAT+AGG - chr1_2:11586305-11586324 None:intergenic 35.0%
TTATTCTAACTCCATTACCG+AGG - chr1_2:11586356-11586375 None:intergenic 35.0%
CATTATGCCTCTTAACAAAC+AGG + chr1_2:11586431-11586450 Msa0056090:intron 35.0%
! AACTCAGCATAATGATGGAA+GGG - chr1_2:11586525-11586544 None:intergenic 35.0%
! AAACTCAGCATAATGATGGA+AGG - chr1_2:11586526-11586545 None:intergenic 35.0%
!! AAAGTTTTCTATTTCTCCCC+AGG + chr1_2:11586613-11586632 Msa0056090:intron 35.0%
! CTATTGATTGGGGATTAACT+AGG - chr1_2:11586791-11586810 None:intergenic 35.0%
CTAGTTAATCCCCAATCAAT+AGG + chr1_2:11586789-11586808 Msa0056090:intron 35.0%
CAATAGCTCAGCATATTTCA+TGG + chr1_2:11586867-11586886 Msa0056090:intron 35.0%
TGTATCTCTGGATTGAGATT+AGG + chr1_2:11587089-11587108 Msa0056090:intron 35.0%
TGAATAACGAGTGTTAGATC+AGG - chr1_2:11587207-11587226 None:intergenic 35.0%
ATTTGCCAGTTGTTCTTGTT+AGG + chr1_2:11587236-11587255 Msa0056090:intron 35.0%
TTTGCCAGTTGTTCTTGTTA+GGG + chr1_2:11587237-11587256 Msa0056090:intron 35.0%
TTAACCCTAACAAGAACAAC+TGG - chr1_2:11587244-11587263 None:intergenic 35.0%
GTTAGGGTTAAATATGTTGC+GGG + chr1_2:11587253-11587272 Msa0056090:intron 35.0%
AAAACTACACAAGTCAGTCA+AGG - chr1_2:11587550-11587569 None:intergenic 35.0%
GTGGTTCTTCTCATTTGTAA+TGG + chr1_2:11587578-11587597 Msa0056090:intron 35.0%
AATGCCAGACACTTATGATA+AGG + chr1_2:11587752-11587771 Msa0056090:CDS 35.0%
! TCAAGAAAAGAGGTTTTCTG+TGG + chr1_2:11587788-11587807 Msa0056090:CDS 35.0%
TTGTATTAAGAGTTGGGCTT+TGG + chr1_2:11588006-11588025 Msa0056090:intron 35.0%
AACAGAATTATGATTGGTGG+AGG - chr1_2:11588045-11588064 None:intergenic 35.0%
!! GTACGATAAGGGTATTAGAA+AGG - chr1_2:11588233-11588252 None:intergenic 35.0%
! GAATCCATTTTCTGAACAAG+AGG + chr1_2:11588298-11588317 Msa0056090:CDS 35.0%
!! ATTTTCTGAACAAGAGGCAT+GGG + chr1_2:11588304-11588323 Msa0056090:CDS 35.0%
CTCGGAAAGTAGATATTACA+AGG - chr1_2:11588370-11588389 None:intergenic 35.0%
AACTTACTGGTAATCATCAG+AGG - chr1_2:11588498-11588517 None:intergenic 35.0%
!! CTGGTTCTGTTGTTACTTAT+CGG + chr1_2:11588560-11588579 Msa0056090:intron 35.0%
! TTCTTTAGGTGTAGCATTGA+AGG + chr1_2:11588616-11588635 Msa0056090:intron 35.0%
! TCTTTTAGTGCACACATTAC+TGG + chr1_2:11588657-11588676 Msa0056090:intron 35.0%
!! GGACCAAATCGATTTTATCA+AGG + chr1_2:11588723-11588742 Msa0056090:CDS 35.0%
ACTTGACTCATGACGTTTAA+TGG + chr1_2:11588785-11588804 Msa0056090:intron 35.0%
ATTAAACTGCAAAGCAAGTC+TGG - chr1_2:11588830-11588849 None:intergenic 35.0%
GCAGTTTAATTACGATGAGA+TGG + chr1_2:11588840-11588859 Msa0056090:intron 35.0%
TGAAAAGTCCAAAGCAAAGT+CGG + chr1_2:11588873-11588892 Msa0056090:CDS 35.0%
! AAAATGTTGATTGACTGGCA+AGG - chr1_2:11588985-11589004 None:intergenic 35.0%
! ATGTATATTAAGGAGTGCAG+TGG + chr1_2:11589186-11589205 Msa0056090:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG - chr1_2:11589293-11589312 None:intergenic 35.0%
CCAAAGTAGGTCAATTATAC+CGG - chr1_2:11589294-11589313 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr1_2:11589307-11589326 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr1_2:11589476-11589495 Msa0056090:intron 35.0%
GGAGTAGCAAAGATAATCAA+AGG + chr1_2:11589506-11589525 Msa0056090:intron 35.0%
GACCCGTATTAATATACTAG+GGG + chr1_2:11589551-11589570 Msa0056090:intron 35.0%
CTCCCCTAGTATATTAATAC+GGG - chr1_2:11589556-11589575 None:intergenic 35.0%
!! AAGAAGGGTGCCAAAAAAAA+CGG + chr1_2:11589580-11589599 Msa0056090:intron 35.0%
! AAGTCGGAAAAGTATATGCA+AGG - chr1_2:11590125-11590144 None:intergenic 35.0%
TCCTCCCGATAAGTATAAAT+GGG - chr1_2:11590175-11590194 None:intergenic 35.0%
TTCCTCCCGATAAGTATAAA+TGG - chr1_2:11590176-11590195 None:intergenic 35.0%
AAAGGGAAGAGATTGAAAAG+GGG - chr1_2:11590237-11590256 None:intergenic 35.0%
GAAAAGGGAAGAGATTGAAA+AGG - chr1_2:11590239-11590258 None:intergenic 35.0%
! ATTCTGATAGTTCTGTCTTC+TGG + chr1_2:11590268-11590287 Msa0056090:intron 35.0%
! CTTGTAATTGTTGGTGAAAC+CGG + chr1_2:11590434-11590453 Msa0056090:CDS 35.0%
GGCATAATAACTTCAGAAGA+TGG - chr1_2:11590917-11590936 None:intergenic 35.0%
ATTATGCCTTTCCTATGCAT+TGG + chr1_2:11590929-11590948 Msa0056090:intron 35.0%
TTCTTTCCAATGCATAGGAA+AGG - chr1_2:11590938-11590957 None:intergenic 35.0%
TTTCCTATGCATTGGAAAGA+AGG + chr1_2:11590937-11590956 Msa0056090:intron 35.0%
AAACCTTCTTTCCAATGCAT+AGG - chr1_2:11590943-11590962 None:intergenic 35.0%
CACGAATTAGGTGTTAAACT+AGG + chr1_2:11591043-11591062 Msa0056090:CDS 35.0%
TTCTCTCAGTAACATTCCAT+CGG - chr1_2:11591366-11591385 None:intergenic 35.0%
! TTGGATTAGGATTCTGGATT+AGG + chr1_2:11591429-11591448 Msa0056090:intron 35.0%
! ATTAGGATTCTGGATTAGGT+TGG + chr1_2:11591433-11591452 Msa0056090:intron 35.0%
ATATTGTAGTGTTGTGATGG+TGG + chr1_2:11591490-11591509 Msa0056090:intron 35.0%
ATTAGTAAAGGTGAGCTGTT+TGG + chr1_2:11591556-11591575 Msa0056090:intron 35.0%
TTAGTAAAGGTGAGCTGTTT+GGG + chr1_2:11591557-11591576 Msa0056090:intron 35.0%
CAATTTCTTCTTGACCAGTA+AGG - chr1_2:11592107-11592126 None:intergenic 35.0%
! GTTGGTAAGTTGGCATATAT+AGG - chr1_2:11592201-11592220 None:intergenic 35.0%
!! TTGTAGTTCAGTTGGTAAGT+TGG - chr1_2:11592211-11592230 None:intergenic 35.0%
ATATTTGAACCAACTCCTGA+AGG + chr1_2:11592237-11592256 Msa0056090:CDS 35.0%
TATTTGAACCAACTCCTGAA+GGG + chr1_2:11592238-11592257 Msa0056090:CDS 35.0%
! TTTCTGCAATATTGGTAGCA+AGG - chr1_2:11592278-11592297 None:intergenic 35.0%
! CTTTTCATCTTAACGAATCC+TGG - chr1_2:11592339-11592358 None:intergenic 35.0%
! AGATTAGTCCGTTGTATTTC+AGG - chr1_2:11592522-11592541 None:intergenic 35.0%
TAAAGCAAATAGAAGCTCCA+GGG - chr1_2:11592640-11592659 None:intergenic 35.0%
TTAAAGCAAATAGAAGCTCC+AGG - chr1_2:11592641-11592660 None:intergenic 35.0%
TTGACAACATAGGATCAAGT+GGG - chr1_2:11592719-11592738 None:intergenic 35.0%
TTTGACAACATAGGATCAAG+TGG - chr1_2:11592720-11592739 None:intergenic 35.0%
! AATAGAAAGCATAGCAGCAA+TGG - chr1_2:11592790-11592809 None:intergenic 35.0%
ATTGCTGCTATGCTTTCTAT+TGG + chr1_2:11592789-11592808 Msa0056090:CDS 35.0%
! CTCAATATTTTACCGTCCAA+AGG + chr1_2:11592815-11592834 Msa0056090:CDS 35.0%
AGACCATATTGCATTGCTAA+AGG + chr1_2:11592893-11592912 Msa0056090:CDS 35.0%
GAACCTTTAGCAATGCAATA+TGG - chr1_2:11592899-11592918 None:intergenic 35.0%
!! GCATCTTTGAAGTGGAAATT+AGG + chr1_2:11592979-11592998 Msa0056090:intron 35.0%
!! CTTTGAAGTGGAAATTAGGA+TGG + chr1_2:11592983-11593002 Msa0056090:intron 35.0%
! TCAGGGTATCCCTATAAATA+GGG - chr1_2:11593118-11593137 None:intergenic 35.0%
! CTTGATTTAGGATTGAGTCA+GGG - chr1_2:11593135-11593154 None:intergenic 35.0%
! TCTTGATTTAGGATTGAGTC+AGG - chr1_2:11593136-11593155 None:intergenic 35.0%
! TCCAACACTTTTCATCTAGA+TGG + chr1_2:11593226-11593245 Msa0056090:intron 35.0%
! TCCATCTAGATGAAAAGTGT+TGG - chr1_2:11593230-11593249 None:intergenic 35.0%
AGATACGGTGAGATTATTGT+TGG + chr1_2:11593272-11593291 Msa0056090:intron 35.0%
GATACGGTGAGATTATTGTT+GGG + chr1_2:11593273-11593292 Msa0056090:intron 35.0%
GCATGCATATGTATACTTGT+TGG + chr1_2:11593298-11593317 Msa0056090:intron 35.0%
! TCCTTGTTCTAGATTGTTGT+TGG + chr1_2:11593346-11593365 Msa0056090:intron 35.0%
! TCCAACAACAATCTAGAACA+AGG - chr1_2:11593350-11593369 None:intergenic 35.0%
TTTCCCAGGTTTACAATTCT+TGG + chr1_2:11593386-11593405 Msa0056090:intron 35.0%
CTTCCAAGAATTGTAAACCT+GGG - chr1_2:11593392-11593411 None:intergenic 35.0%
AGTCATGGAAATAATAGTGG+AGG + chr1_2:11593504-11593523 Msa0056090:intron 35.0%
! TGAGTAATGTACCGTCATTT+TGG + chr1_2:11593630-11593649 Msa0056090:intron 35.0%
!! ATGTACCGTCATTTTGGATA+AGG + chr1_2:11593636-11593655 Msa0056090:intron 35.0%
TCAGTCCTTATCCAAAATGA+CGG - chr1_2:11593644-11593663 None:intergenic 35.0%
CAGTCAATAAGGATAATAGG+GGG - chr1_2:11593696-11593715 None:intergenic 35.0%
CCACAGTCAATAAGGATAAT+AGG - chr1_2:11593699-11593718 None:intergenic 35.0%
! CCTATTATCCTTATTGACTG+TGG + chr1_2:11593696-11593715 Msa0056090:intron 35.0%
! ATTATCCTTATTGACTGTGG+AGG + chr1_2:11593699-11593718 Msa0056090:intron 35.0%
TGTCTTATCCTTTGTGTCTA+AGG + chr1_2:11593929-11593948 Msa0056090:intron 35.0%
!! CTTCTTGATGGTTTTTCACT+TGG + chr1_2:11593974-11593993 Msa0056090:intron 35.0%
! CTACATAAGAAATTTGAGGC+AGG - chr1_2:11594004-11594023 None:intergenic 35.0%
! TAGAACTTTTTGCAGCCTTA+TGG + chr1_2:11594034-11594053 Msa0056090:intron 35.0%
CATGAAATAAGAAACCCACT+TGG - chr1_2:11594583-11594602 None:intergenic 35.0%
! GTGGGTTTCTTATTTCATGT+TGG + chr1_2:11594584-11594603 Msa0056090:intron 35.0%
TGCACAAAAACGGATCATAT+CGG + chr1_2:11594963-11594982 Msa0056090:CDS 35.0%
TCTTACAAACTGGATTTAGG+AGG - chr1_2:11595164-11595183 None:intergenic 35.0%
ACAACCCTTATCTTACAAAC+TGG - chr1_2:11595174-11595193 None:intergenic 35.0%
! GGAATTTAAGGTCTATGCAT+CGG - chr1_2:11595201-11595220 None:intergenic 35.0%
ATGCGGATCCCATATAAATT+TGG + chr1_2:11595442-11595461 Msa0056090:intron 35.0%
GGGTCTCACCAAATTTATAT+GGG - chr1_2:11595453-11595472 None:intergenic 35.0%
!! TGCTATAACAGGTTGATCTA+TGG - chr1_2:11595599-11595618 None:intergenic 35.0%
ATAGATCAACCTGTTATAGC+AGG + chr1_2:11595598-11595617 Msa0056090:intron 35.0%
TAGATCAACCTGTTATAGCA+GGG + chr1_2:11595599-11595618 Msa0056090:intron 35.0%
GCATCTGGATGTTCAATTTA+AGG + chr1_2:11595952-11595971 Msa0056090:intron 35.0%
! TCCACTTTGTTTATACTCGA+AGG + chr1_2:11596068-11596087 Msa0056090:intron 35.0%
ACCTTCGAGTATAAACAAAG+TGG - chr1_2:11596072-11596091 None:intergenic 35.0%
AACCAAGGAATATATGAGAC+AGG + chr1_2:11596131-11596150 Msa0056090:CDS 35.0%
TACCTGTCTCATATATTCCT+TGG - chr1_2:11596136-11596155 None:intergenic 35.0%
CATTTGGTTGCTTAAATGCA+GGG - chr1_2:11596161-11596180 None:intergenic 35.0%
ACATTTGGTTGCTTAAATGC+AGG - chr1_2:11596162-11596181 None:intergenic 35.0%
CATACTGTCTTCAAGATCAT+TGG - chr1_2:11596301-11596320 None:intergenic 35.0%
ATTCCCTTAGGTTCCTAATT+TGG + chr1_2:11596377-11596396 Msa0056090:intron 35.0%
AAACCGAATTAGGAACCTAA+GGG - chr1_2:11596430-11596449 None:intergenic 35.0%
TAAACCGAATTAGGAACCTA+AGG - chr1_2:11596431-11596450 None:intergenic 35.0%
! AGTAGTACAATCTCCTTTTC+TGG - chr1_2:11597140-11597159 None:intergenic 35.0%
TAGGCATGAATATTCTGGTA+AGG - chr1_2:11597284-11597303 None:intergenic 35.0%
GAAAGTCAATTAGGAAGAGA+GGG - chr1_2:11597309-11597328 None:intergenic 35.0%
! TTCCCTCCCAAATCATTTTA+TGG + chr1_2:11597326-11597345 Msa0056090:intron 35.0%
! TCCCTCCCAAATCATTTTAT+GGG + chr1_2:11597327-11597346 Msa0056090:intron 35.0%
CTGCTTGAAAAATACTTGGA+GGG + chr1_2:11597351-11597370 Msa0056090:intron 35.0%
TGCTTGAAAAATACTTGGAG+GGG + chr1_2:11597352-11597371 Msa0056090:intron 35.0%
TGGAATTGGAAAAAGGAATC+AGG + chr1_2:11597432-11597451 Msa0056090:intron 35.0%
GGAATTGGAAAAAGGAATCA+GGG + chr1_2:11597433-11597452 Msa0056090:intron 35.0%
ATCAGGGTTGTTTAACAGAA+TGG + chr1_2:11597449-11597468 Msa0056090:intron 35.0%
GATATGTGGCAAACTAAGAT+TGG + chr1_2:11597471-11597490 Msa0056090:intron 35.0%
! GTTTAAAACCATCAAGCTCA+AGG + chr1_2:11597526-11597545 Msa0056090:intron 35.0%
GAAGTACATTCGTTAGAAAG+TGG + chr1_2:11597871-11597890 Msa0056090:exon 35.0%
!! TTAGAAAGTGGTTTTGCTAG+AGG + chr1_2:11597883-11597902 Msa0056090:exon 35.0%
TGGTCATGTGATGATATGTT+TGG + chr1_2:11598013-11598032 Msa0056090:intron 35.0%
GGTCATGTGATGATATGTTT+GGG + chr1_2:11598014-11598033 Msa0056090:intron 35.0%
ATGTGATGATATGTTTGGGT+GGG + chr1_2:11598018-11598037 Msa0056090:intron 35.0%
!! TTGGTGGTAATGGAAATTGA+CGG + chr1_2:11598140-11598159 Msa0056090:three_prime_UTR 35.0%
TACAAACCAACTTTATCCAC+AGG - chr1_2:11598299-11598318 None:intergenic 35.0%
TTGTGAACTTAAGTCACAGA+TGG + chr1_2:11598359-11598378 Msa0056090:three_prime_UTR 35.0%
TTGATCAGTGTGGTTTCGAT+GGG - chr1_2:11582185-11582204 None:intergenic 40.0%
TTTGATCAGTGTGGTTTCGA+TGG - chr1_2:11582186-11582205 None:intergenic 40.0%
CACGGTTTGTGATTTCTTTG+CGG - chr1_2:11582263-11582282 None:intergenic 40.0%
GAGTAAAATGCAATACCTGG+CGG - chr1_2:11582293-11582312 None:intergenic 40.0%
! TGTTTTCCTTCCCCTGTTAA+CGG + chr1_2:11582341-11582360 Msa0056090:intron 40.0%
! GTGAAAAGAAGCGTATGTCT+AGG - chr1_2:11582483-11582502 None:intergenic 40.0%
AGTAAGGAGATGGAATCAGA+TGG + chr1_2:11582604-11582623 Msa0056090:intron 40.0%
! AGCTCTAATTGAAAGTGGGT+CGG - chr1_2:11582753-11582772 None:intergenic 40.0%
ATTGCAAGTAGCTGTCAAGA+AGG - chr1_2:11583146-11583165 None:intergenic 40.0%
TTCTTGACAGCTACTTGCAA+TGG + chr1_2:11583145-11583164 Msa0056090:intron 40.0%
!! GATAAGTTGATGTCACTGCT+TGG + chr1_2:11583347-11583366 Msa0056090:CDS 40.0%
! TACTTCACCAGCTGATTTAG+TGG + chr1_2:11583535-11583554 Msa0056090:CDS 40.0%
! ACTTCACCAGCTGATTTAGT+GGG + chr1_2:11583536-11583555 Msa0056090:CDS 40.0%
TGATTTAGTGGGAAAGCTAG+TGG + chr1_2:11583547-11583566 Msa0056090:CDS 40.0%
AATTTCTTCCACAAACGCAC+GGG - chr1_2:11583597-11583616 None:intergenic 40.0%
! GCGGACTTACACAATTTTGA+AGG + chr1_2:11583823-11583842 Msa0056090:CDS 40.0%
TTGACCAAATGCAACAATGC+AGG + chr1_2:11584072-11584091 Msa0056090:intron 40.0%
CTTACCTGCATTGTTGCATT+TGG - chr1_2:11584079-11584098 None:intergenic 40.0%
CAACAATGCAGGTAAGTTCA+AGG + chr1_2:11584083-11584102 Msa0056090:intron 40.0%
CTGAACCACTATCTTCATCA+AGG - chr1_2:11584144-11584163 None:intergenic 40.0%
! TGATGAAGATAGTGGTTCAG+AGG + chr1_2:11584144-11584163 Msa0056090:CDS 40.0%
AATCACATCAAGGGAGTTGA+TGG - chr1_2:11584518-11584537 None:intergenic 40.0%
!! GGAAGGTACTCATTAGTAGT+CGG + chr1_2:11584640-11584659 Msa0056090:intron 40.0%
TGATACCATCATGCTCAAGT+TGG + chr1_2:11584718-11584737 Msa0056090:intron 40.0%
GGTGAAAATGTGTGGAAGAT+GGG + chr1_2:11584807-11584826 Msa0056090:intron 40.0%
GTGAAAATGTGTGGAAGATG+GGG + chr1_2:11584808-11584827 Msa0056090:intron 40.0%
! AAACATTTAATGGGTGGGAG+AGG - chr1_2:11584923-11584942 None:intergenic 40.0%
! ACGAAAGGAAGAAGGTATGT+CGG + chr1_2:11585156-11585175 Msa0056090:intron 40.0%
GATTCTGTTGTGCTGTACAA+TGG + chr1_2:11585579-11585598 Msa0056090:intron 40.0%
! AAATCGTCTAGGACATGGTT+TGG + chr1_2:11585699-11585718 Msa0056090:intron 40.0%
GTGTCAAGCCAATTCTGTAA+AGG + chr1_2:11586315-11586334 Msa0056090:intron 40.0%
GGAAATGCTTTATGCAACCT+CGG + chr1_2:11586336-11586355 Msa0056090:intron 40.0%
AAAGAAAGACTATGGTACCG+AGG + chr1_2:11586375-11586394 Msa0056090:intron 40.0%
TATAAAAAAGCGGTCAGAGC+AGG + chr1_2:11586659-11586678 Msa0056090:CDS 40.0%
TGGATAACGAGTGTTAGATC+AGG + chr1_2:11586887-11586906 Msa0056090:intron 40.0%
TTGAGATTAGGAAGTCCTCT+AGG + chr1_2:11587101-11587120 Msa0056090:intron 40.0%
ATTAGGAAGTCCTCTAGGTT+GGG + chr1_2:11587106-11587125 Msa0056090:intron 40.0%
GAAAATTGGGATAGGATCCT+CGG + chr1_2:11587641-11587660 Msa0056090:intron 40.0%
GCTAAACTCTCATGTTCTTC+TGG + chr1_2:11587716-11587735 Msa0056090:intron 40.0%
CCTTCCTTATCATAAGTGTC+TGG - chr1_2:11587759-11587778 None:intergenic 40.0%
CCAGACACTTATGATAAGGA+AGG + chr1_2:11587756-11587775 Msa0056090:CDS 40.0%
GACACTTATGATAAGGAAGG+CGG + chr1_2:11587759-11587778 Msa0056090:CDS 40.0%
! CAATTGTAGTGGAGATCATG+AGG - chr1_2:11587841-11587860 None:intergenic 40.0%
CAATAGGGATTCAAATGCTG+AGG + chr1_2:11588268-11588287 Msa0056090:intron 40.0%
CATGCCTCTTGTTCAGAAAA+TGG - chr1_2:11588305-11588324 None:intergenic 40.0%
! CATTTTCTGAACAAGAGGCA+TGG + chr1_2:11588303-11588322 Msa0056090:CDS 40.0%
TGTATGTAGGTTTGTGTTCG+AGG + chr1_2:11588702-11588721 Msa0056090:intron 40.0%
!!! TTTTATCAAGGCATCGGTGA+TGG + chr1_2:11588735-11588754 Msa0056090:CDS 40.0%
!! ATCAGAGGCATTTGCAATTC+AGG + chr1_2:11588897-11588916 Msa0056090:CDS 40.0%
TGTCAGTCTGTTGCATTAAC+CGG - chr1_2:11589233-11589252 None:intergenic 40.0%
ATCTGTTAGTCATTCCCACT+TGG - chr1_2:11589259-11589278 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG + chr1_2:11589291-11589310 Msa0056090:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr1_2:11589477-11589496 Msa0056090:intron 40.0%
!! GATAATCAAAGGGGCATTGA+AGG + chr1_2:11589517-11589536 Msa0056090:intron 40.0%
ATACTAGGGGAGAAGAAAGA+AGG + chr1_2:11589564-11589583 Msa0056090:intron 40.0%
TACTAGGGGAGAAGAAAGAA+GGG + chr1_2:11589565-11589584 Msa0056090:intron 40.0%
!! AGAAGGGTGCCAAAAAAAAC+GGG + chr1_2:11589581-11589600 Msa0056090:intron 40.0%
! ACTTTTCCGACTTCCTTTTC+AGG + chr1_2:11590132-11590151 Msa0056090:intron 40.0%
TTCTTTCTCTCCTCCTGAAA+AGG - chr1_2:11590148-11590167 None:intergenic 40.0%
ACCCATTTATACTTATCGGG+AGG + chr1_2:11590171-11590190 Msa0056090:CDS 40.0%
AAGGGAAGAGATTGAAAAGG+GGG - chr1_2:11590236-11590255 None:intergenic 40.0%
!!! GTTCTGTCTTCTGGTTTTTG+AGG + chr1_2:11590277-11590296 Msa0056090:intron 40.0%
TTGTGTAGTCTTTCCAGAAC+CGG - chr1_2:11590456-11590475 None:intergenic 40.0%
CCAGCTTCATGAAGATATTG+GGG - chr1_2:11590482-11590501 None:intergenic 40.0%
GCCAGCTTCATGAAGATATT+GGG - chr1_2:11590483-11590502 None:intergenic 40.0%
AGCCAGCTTCATGAAGATAT+TGG - chr1_2:11590484-11590503 None:intergenic 40.0%
TGGCTACACAAAACATGGAA+TGG + chr1_2:11590499-11590518 Msa0056090:CDS 40.0%
ACACAAAACATGGAATGGTG+TGG + chr1_2:11590504-11590523 Msa0056090:intron 40.0%
TACACTATATGGGAAGCAAG+AGG + chr1_2:11591179-11591198 Msa0056090:intron 40.0%
CTGATGTGCAATCCTCAAAA+CGG - chr1_2:11591319-11591338 None:intergenic 40.0%
AGTTATAGGTGAGCGCATAT+TGG + chr1_2:11591410-11591429 Msa0056090:intron 40.0%
! CGCATATTGGATTAGGATTC+TGG + chr1_2:11591423-11591442 Msa0056090:intron 40.0%
!! GGATTAGGTTGGATGCTTTA+TGG + chr1_2:11591444-11591463 Msa0056090:intron 40.0%
! AATCCAAGTGAGTTGAATGG+CGG + chr1_2:11591601-11591620 Msa0056090:intron 40.0%
GCATTGTCTTCGCTTATATC+TGG + chr1_2:11591772-11591791 Msa0056090:intron 40.0%
GATATCAGCAACTTGAGATC+AGG - chr1_2:11591895-11591914 None:intergenic 40.0%
TTGGTGAAGTGTATTTCCAC+CGG - chr1_2:11591997-11592016 None:intergenic 40.0%
CTTAGATGCAGCTATTGTCA+CGG + chr1_2:11592035-11592054 Msa0056090:CDS 40.0%
ATCCATGTTACTCAATCTCC+TGG + chr1_2:11592066-11592085 Msa0056090:CDS 40.0%
!! ATCTTGAAGCATCGAACTAG+AGG + chr1_2:11592141-11592160 Msa0056090:CDS 40.0%
ATTTGAACCAACTCCTGAAG+GGG + chr1_2:11592239-11592258 Msa0056090:CDS 40.0%
AAAGACTCCATTCCTGTCTT+TGG - chr1_2:11592369-11592388 None:intergenic 40.0%
!!! ATTGCTGAGGCTTTTGAGAT+GGG - chr1_2:11592402-11592421 None:intergenic 40.0%
ACACCGTTCCTGAAATACAA+CGG + chr1_2:11592511-11592530 Msa0056090:CDS 40.0%
AGTCCGTTGTATTTCAGGAA+CGG - chr1_2:11592517-11592536 None:intergenic 40.0%
TAAGCATGGTCAGTTAACCA+AGG + chr1_2:11592671-11592690 Msa0056090:CDS 40.0%
AGTTAACCAAGGTAGGTAGA+CGG + chr1_2:11592682-11592701 Msa0056090:CDS 40.0%
GCACTTGTTTATCCTTTGGA+CGG - chr1_2:11592830-11592849 None:intergenic 40.0%
GCATGCACTTGTTTATCCTT+TGG - chr1_2:11592834-11592853 None:intergenic 40.0%
! GCAAGACTGAATTTTCACTC+TGG + chr1_2:11592861-11592880 Msa0056090:CDS 40.0%
TGAAGTGGAAATTAGGATGG+AGG + chr1_2:11592986-11593005 Msa0056090:intron 40.0%
! GTCAGGGTATCCCTATAAAT+AGG - chr1_2:11593119-11593138 None:intergenic 40.0%
CCTTCCAAGAATTGTAAACC+TGG - chr1_2:11593393-11593412 None:intergenic 40.0%
CCAGGTTTACAATTCTTGGA+AGG + chr1_2:11593390-11593409 Msa0056090:intron 40.0%
ATAAGGATAATAGGGGGAGT+AGG - chr1_2:11593690-11593709 None:intergenic 40.0%
!! CATGATTTTGTGGACTGTAG+TGG + chr1_2:11593724-11593743 Msa0056090:intron 40.0%
! TGCCTTACCCTCGATTTTAT+GGG + chr1_2:11594680-11594699 Msa0056090:intron 40.0%
! TTGTGCAATTTTGCAGTGTG+TGG - chr1_2:11594950-11594969 None:intergenic 40.0%
TGTTGACATACACCCTAGTT+CGG + chr1_2:11595006-11595025 Msa0056090:CDS 40.0%
ACAAACTGGATTTAGGAGGT+TGG - chr1_2:11595160-11595179 None:intergenic 40.0%
TGTGTCAGGATTTACACTCT+AGG + chr1_2:11595305-11595324 Msa0056090:intron 40.0%
GTGTCAGGATTTACACTCTA+GGG + chr1_2:11595306-11595325 Msa0056090:intron 40.0%
! TGTGTTAGAGTGAGTGTTGT+TGG - chr1_2:11595384-11595403 None:intergenic 40.0%
TTAGTGCGACCAATGAAAGA+GGG - chr1_2:11595419-11595438 None:intergenic 40.0%
TTTAGTGCGACCAATGAAAG+AGG - chr1_2:11595420-11595439 None:intergenic 40.0%
ATTGGTCGCACTAAATCATG+CGG + chr1_2:11595425-11595444 Msa0056090:intron 40.0%
GGGGTCTCACCAAATTTATA+TGG - chr1_2:11595454-11595473 None:intergenic 40.0%
TATGGATGACTGACAGTTGT+CGG - chr1_2:11595581-11595600 None:intergenic 40.0%
AAGAGTTACCCTGCTATAAC+AGG - chr1_2:11595610-11595629 None:intergenic 40.0%
TTATAGCAGGGTAACTCTTC+AGG + chr1_2:11595611-11595630 Msa0056090:intron 40.0%
! ACCAATAAAAGAGCGTGTGT+TGG + chr1_2:11595744-11595763 Msa0056090:intron 40.0%
! ACCAACACACGCTCTTTTAT+TGG - chr1_2:11595748-11595767 None:intergenic 40.0%
! GTTGAAAAGGGTTTGGTTGT+TGG + chr1_2:11595913-11595932 Msa0056090:intron 40.0%
GTTAAAGTCACAGTGGTTGT+TGG + chr1_2:11596251-11596270 Msa0056090:CDS 40.0%
! ACGTCCTTTTATAGACCCTT+AGG + chr1_2:11596412-11596431 Msa0056090:intron 40.0%
GGAACCTAAGGGTCTATAAA+AGG - chr1_2:11596419-11596438 None:intergenic 40.0%
AGACCCTTAGGTTCCTAATT+CGG + chr1_2:11596424-11596443 Msa0056090:intron 40.0%
!! ATGCTCTAAGGGCCTATAAA+AGG - chr1_2:11597058-11597077 None:intergenic 40.0%
TACCATTGTGGATGCTCTAA+GGG - chr1_2:11597069-11597088 None:intergenic 40.0%
ATGGAGTCCATAAAGTGATG+TGG + chr1_2:11597101-11597120 Msa0056090:intron 40.0%
GTTAGAGCCACATCACTTTA+TGG - chr1_2:11597111-11597130 None:intergenic 40.0%
CTCTAACTGCTATCCAGAAA+AGG + chr1_2:11597124-11597143 Msa0056090:intron 40.0%
TGGTAAGGATAGGAACATGA+GGG - chr1_2:11597269-11597288 None:intergenic 40.0%
GGGAATAGGCATGAATATTC+TGG - chr1_2:11597289-11597308 None:intergenic 40.0%
CAATTAGGAAGAGAGGGAAT+AGG - chr1_2:11597303-11597322 None:intergenic 40.0%
GGAAAGTCAATTAGGAAGAG+AGG - chr1_2:11597310-11597329 None:intergenic 40.0%
TTTGGGAGGGAAAGTCAATT+AGG - chr1_2:11597318-11597337 None:intergenic 40.0%
! GCCCATAAAATGATTTGGGA+GGG - chr1_2:11597331-11597350 None:intergenic 40.0%
GCAGGCCCATAAAATGATTT+GGG - chr1_2:11597335-11597354 None:intergenic 40.0%
AGCAGGCCCATAAAATGATT+TGG - chr1_2:11597336-11597355 None:intergenic 40.0%
!!! CCTCCAAGTATTTTTCAAGC+AGG - chr1_2:11597353-11597372 None:intergenic 40.0%
CCTGCTTGAAAAATACTTGG+AGG + chr1_2:11597350-11597369 Msa0056090:intron 40.0%
! GTTGATAAATAGGGAAAGGG+TGG + chr1_2:11597604-11597623 Msa0056090:intron 40.0%
TCTAACGAATGTACTTCCTG+CGG - chr1_2:11597868-11597887 None:intergenic 40.0%
! GATCTTCTAGTGAGCTTTTG+TGG + chr1_2:11597993-11598012 Msa0056090:intron 40.0%
CATGTGATGATATGTTTGGG+TGG + chr1_2:11598017-11598036 Msa0056090:intron 40.0%
! ATGTTTGGGTGGGTACTTTT+AGG + chr1_2:11598028-11598047 Msa0056090:intron 40.0%
!! TGGGTACTTTTAGGCTTTGT+TGG + chr1_2:11598037-11598056 Msa0056090:intron 40.0%
CCACTCAACTTCCGATATAT+CGG - chr1_2:11598071-11598090 None:intergenic 40.0%
ATATATCGGAAGTTGAGTGG+TGG + chr1_2:11598071-11598090 Msa0056090:three_prime_UTR 40.0%
!! TTGAGTGGTGGTTGATTTGA+AGG + chr1_2:11598083-11598102 Msa0056090:three_prime_UTR 40.0%
AATTTCCATTACCACCAACG+AGG - chr1_2:11598138-11598157 None:intergenic 40.0%
!!! GGTGTTGTTGATTTTTCGCT+GGG + chr1_2:11598161-11598180 Msa0056090:three_prime_UTR 40.0%
! TGATTTTTCGCTGGGTGTTT+AGG + chr1_2:11598169-11598188 Msa0056090:three_prime_UTR 40.0%
ATTGCACCTGTGGATAAAGT+TGG + chr1_2:11598290-11598309 Msa0056090:three_prime_UTR 40.0%
GAAGCTACGTCTCCAATTTG+TGG - chr1_2:11582210-11582229 None:intergenic 45.0%
GGTTTGTGATTTCTTTGCGG+CGG - chr1_2:11582260-11582279 None:intergenic 45.0%
TGGTACATTGCCGTTAACAG+GGG - chr1_2:11582354-11582373 None:intergenic 45.0%
CTGGTACATTGCCGTTAACA+GGG - chr1_2:11582355-11582374 None:intergenic 45.0%
TCTGGTACATTGCCGTTAAC+AGG - chr1_2:11582356-11582375 None:intergenic 45.0%
TGGAAACAACTTGGCTTAGG+TGG + chr1_2:11582554-11582573 Msa0056090:intron 45.0%
AAGGAGATGGAATCAGATGG+AGG + chr1_2:11582607-11582626 Msa0056090:intron 45.0%
AGGAGATGGAATCAGATGGA+GGG + chr1_2:11582608-11582627 Msa0056090:intron 45.0%
AGAAGGCTCGGATGATTGAA+GGG - chr1_2:11583129-11583148 None:intergenic 45.0%
AAGAAGGCTCGGATGATTGA+AGG - chr1_2:11583130-11583149 None:intergenic 45.0%
AAGTAGCTGTCAAGAAGGCT+CGG - chr1_2:11583141-11583160 None:intergenic 45.0%
AGCTTTCCCACTAAATCAGC+TGG - chr1_2:11583545-11583564 None:intergenic 45.0%
TGGGAAAGCTAGTGGAGTTT+GGG + chr1_2:11583555-11583574 Msa0056090:CDS 45.0%
TTTAAGCCAGACGATCTACG+AGG - chr1_2:11583632-11583651 None:intergenic 45.0%
AGAGAGAGAAGCTGCAATGT+TGG + chr1_2:11583790-11583809 Msa0056090:CDS 45.0%
CAATGTTGGCAAGGAAACAG+CGG + chr1_2:11583804-11583823 Msa0056090:CDS 45.0%
! TTACGACACAGTTTTGCAGC+TGG + chr1_2:11584198-11584217 Msa0056090:intron 45.0%
AGACACCAACTTGAGCATGA+TGG - chr1_2:11584726-11584745 None:intergenic 45.0%
GGGTGAAAATGTGTGGAAGA+TGG + chr1_2:11584806-11584825 Msa0056090:intron 45.0%
CCATGCTACTACTGTGAGAA+TGG - chr1_2:11584837-11584856 None:intergenic 45.0%
CCATTCTCACAGTAGTAGCA+TGG + chr1_2:11584834-11584853 Msa0056090:intron 45.0%
! AAAGGAAGAAGGTATGTCGG+TGG + chr1_2:11585159-11585178 Msa0056090:intron 45.0%
CTTCGAATTGCTTCGTCTGT+TGG - chr1_2:11585283-11585302 None:intergenic 45.0%
TCTGTTGTGCTGTACAATGG+AGG + chr1_2:11585582-11585601 Msa0056090:intron 45.0%
AGTTTAGTGGTGAGGGGTTT+GGG - chr1_2:11585643-11585662 None:intergenic 45.0%
TAGTTTAGTGGTGAGGGGTT+TGG - chr1_2:11585644-11585663 None:intergenic 45.0%
AGGTGTGAAGCTTTCAGAAG+TGG + chr1_2:11586184-11586203 Msa0056090:CDS 45.0%
AAGTGGAACAGCGTGAGTTA+AGG + chr1_2:11586201-11586220 Msa0056090:CDS 45.0%
GCTTTATGCAACCTCGGTAA+TGG + chr1_2:11586342-11586361 Msa0056090:intron 45.0%
! AAAGACTATGGTACCGAGGT+TGG + chr1_2:11586379-11586398 Msa0056090:intron 45.0%
! AAGACTATGGTACCGAGGTT+GGG + chr1_2:11586380-11586399 Msa0056090:intron 45.0%
ACAAGTGCTTTACCCAACCT+CGG - chr1_2:11586395-11586414 None:intergenic 45.0%
GATTAGGAAGTCCTCTAGGT+TGG + chr1_2:11587105-11587124 Msa0056090:intron 45.0%
! TAGGTTGGGCAAGGAAATCT+AGG + chr1_2:11587120-11587139 Msa0056090:intron 45.0%
CTAGGACAAGGTTGTCTTAG+TGG + chr1_2:11587138-11587157 Msa0056090:intron 45.0%
GCATGGGAGGAACATCAAAT+TGG + chr1_2:11588320-11588339 Msa0056090:CDS 45.0%
GGAAAGGCAACACTGAAGTA+TGG + chr1_2:11588452-11588471 Msa0056090:intron 45.0%
!! ATCGGTGATGGATGGAGATA+AGG + chr1_2:11588747-11588766 Msa0056090:CDS 45.0%
! TCAGTTACTTTGTGGCAGTC+AGG + chr1_2:11589149-11589168 Msa0056090:intron 45.0%
AACAGACTGACATCTCCAAG+TGG + chr1_2:11589241-11589260 Msa0056090:intron 45.0%
ACAGACTGACATCTCCAAGT+GGG + chr1_2:11589242-11589261 Msa0056090:intron 45.0%
GTAGGTCAATTATACCGGGA+CGG - chr1_2:11589289-11589308 None:intergenic 45.0%
CGATTCTACGATTATGGACG+AGG + chr1_2:11589711-11589730 Msa0056090:intron 45.0%
TTCTACGATTATGGACGAGG+TGG + chr1_2:11589714-11589733 Msa0056090:intron 45.0%
GAAGTCGTAACACTACTCGT+AGG - chr1_2:11590045-11590064 None:intergenic 45.0%
!! TTTCCGACTTCCTTTTCAGG+AGG + chr1_2:11590135-11590154 Msa0056090:intron 45.0%
TCTCCTCCTGAAAAGGAAGT+CGG - chr1_2:11590141-11590160 None:intergenic 45.0%
AGGGAAGAGATTGAAAAGGG+GGG - chr1_2:11590235-11590254 None:intergenic 45.0%
! ATTGTTGGTGAAACCGGTTC+TGG + chr1_2:11590440-11590459 Msa0056090:CDS 45.0%
CCCCAATATCTTCATGAAGC+TGG + chr1_2:11590479-11590498 Msa0056090:CDS 45.0%
GAAGCTGGCTACACAAAACA+TGG + chr1_2:11590494-11590513 Msa0056090:CDS 45.0%
TCGTGTCATCGAATTGCAAG+TGG + chr1_2:11590879-11590898 Msa0056090:intron 45.0%
AGGTGTTAAACTAGGACACG+AGG + chr1_2:11591051-11591070 Msa0056090:CDS 45.0%
GTTAAACTAGGACACGAGGT+AGG + chr1_2:11591055-11591074 Msa0056090:intron 45.0%
TGTGCAATCCTCAAAACGGA+TGG - chr1_2:11591315-11591334 None:intergenic 45.0%
ATTTCTTGGTGAGCCTGATC+TGG + chr1_2:11591385-11591404 Msa0056090:CDS 45.0%
AGCCTGATCTGGCAAGTTAT+AGG + chr1_2:11591396-11591415 Msa0056090:CDS 45.0%
! CACCTATAACTTGCCAGATC+AGG - chr1_2:11591401-11591420 None:intergenic 45.0%
AGGTGAGCGCATATTGGATT+AGG + chr1_2:11591416-11591435 Msa0056090:intron 45.0%
!! TAGTGTTGTGATGGTGGATG+AGG + chr1_2:11591496-11591515 Msa0056090:intron 45.0%
TCAGCAACTTGAGATCAGGT+CGG - chr1_2:11591891-11591910 None:intergenic 45.0%
!! AATTCCAGGGAGAAGGTATC+CGG + chr1_2:11591975-11591994 Msa0056090:CDS 45.0%
GCATCTAAGTAGTCAGCTTC+TGG - chr1_2:11592024-11592043 None:intergenic 45.0%
CTCCAGGAGATTGAGTAACA+TGG - chr1_2:11592071-11592090 None:intergenic 45.0%
!! AAGCATCGAACTAGAGGCTT+AGG + chr1_2:11592147-11592166 Msa0056090:CDS 45.0%
! AGCATCGAACTAGAGGCTTA+GGG + chr1_2:11592148-11592167 Msa0056090:CDS 45.0%
!! CATTGCTGAGGCTTTTGAGA+TGG - chr1_2:11592403-11592422 None:intergenic 45.0%
!!! TACAACCGGAAGCATTTTCC+CGG - chr1_2:11592456-11592475 None:intergenic 45.0%
TTCAATAAGGCCTCAGTAGG+TGG - chr1_2:11592615-11592634 None:intergenic 45.0%
GCTTTCAATAAGGCCTCAGT+AGG - chr1_2:11592618-11592637 None:intergenic 45.0%
AAGCTCCAGGGCTTTCAATA+AGG - chr1_2:11592628-11592647 None:intergenic 45.0%
CATGGTCAGTTAACCAAGGT+AGG + chr1_2:11592675-11592694 Msa0056090:CDS 45.0%
! GTGCTTGTGCATCTTTGAAG+TGG + chr1_2:11592971-11592990 Msa0056090:intron 45.0%
! TCCTAGTTCTCTCCCATACA+CGG + chr1_2:11593009-11593028 Msa0056090:intron 45.0%
! CTTTTCCCTACTCCGTGTAT+GGG - chr1_2:11593024-11593043 None:intergenic 45.0%
! TCTTTTCCCTACTCCGTGTA+TGG - chr1_2:11593025-11593044 None:intergenic 45.0%
AGGAAATCAAGGAAAGCGAG+CGG + chr1_2:11593524-11593543 Msa0056090:intron 45.0%
ATGCACCTCCACAGTCAATA+AGG - chr1_2:11593707-11593726 None:intergenic 45.0%
!! TGTGGAGGTGCATGATTTTG+TGG + chr1_2:11593714-11593733 Msa0056090:intron 45.0%
GTCGGACAAACATTGCCATA+AGG - chr1_2:11594052-11594071 None:intergenic 45.0%
TTCTAAGTACTCGGGAGAGT+CGG - chr1_2:11594070-11594089 None:intergenic 45.0%
GTCGGACAAACATTGCCATA+AGG - chr1_2:11594052-11594071 None:intergenic 45.0%
TTCTAAGTACTCGGGAGAGT+CGG - chr1_2:11594070-11594089 None:intergenic 45.0%
!! GTGGCATTGACTTGAAACCT+GGG - chr1_2:11594551-11594570 None:intergenic 45.0%
!! TGTGGCATTGACTTGAAACC+TGG - chr1_2:11594552-11594571 None:intergenic 45.0%
AAAATCGAGGGTAAGGCACA+AGG - chr1_2:11594678-11594697 None:intergenic 45.0%
! GTGCCTTACCCTCGATTTTA+TGG + chr1_2:11594679-11594698 Msa0056090:intron 45.0%
! GCCTTACCCTCGATTTTATG+GGG + chr1_2:11594681-11594700 Msa0056090:intron 45.0%
ACCCCATAAAATCGAGGGTA+AGG - chr1_2:11594685-11594704 None:intergenic 45.0%
!! ATAGACCTGCGAGTTGATCA+CGG - chr1_2:11594767-11594786 None:intergenic 45.0%
AACTCGCAGGTCTATTAGAG+AGG + chr1_2:11594772-11594791 Msa0056090:CDS 45.0%
ACTCGCAGGTCTATTAGAGA+GGG + chr1_2:11594773-11594792 Msa0056090:CDS 45.0%
GTTGACATACACCCTAGTTC+GGG + chr1_2:11595007-11595026 Msa0056090:CDS 45.0%
TTGACATACACCCTAGTTCG+GGG + chr1_2:11595008-11595027 Msa0056090:CDS 45.0%
! CTGGATTTAGGAGGTTGGTT+GGG - chr1_2:11595155-11595174 None:intergenic 45.0%
! ACTGGATTTAGGAGGTTGGT+TGG - chr1_2:11595156-11595175 None:intergenic 45.0%
! TGAACCGCAATTTGAAGCCA+TGG + chr1_2:11595242-11595261 Msa0056090:intron 45.0%
ACCACCATGGCTTCAAATTG+CGG - chr1_2:11595249-11595268 None:intergenic 45.0%
TACCATACCTTTCTGAGTCG+AGG - chr1_2:11595277-11595296 None:intergenic 45.0%
! TCGACTCAGAAAGGTATGGT+AGG + chr1_2:11595276-11595295 Msa0056090:intron 45.0%
ATGGTAGGCATGTTTGTGTC+AGG + chr1_2:11595291-11595310 Msa0056090:intron 45.0%
TCTAGGGACGACAAGAGATT+GGG + chr1_2:11595322-11595341 Msa0056090:intron 45.0%
AGTTGTCGGTCAGTTAACAG+CGG - chr1_2:11595567-11595586 None:intergenic 45.0%
GTTGTTTGTGTGTGTGCATC+TGG + chr1_2:11595937-11595956 Msa0056090:intron 45.0%
TCATGGTACACAACGCATCT+TGG - chr1_2:11596099-11596118 None:intergenic 45.0%
TGGTTGTGAGCACTAGTTCA+TGG - chr1_2:11596116-11596135 None:intergenic 45.0%
TGAACTAGTGCTCACAACCA+AGG + chr1_2:11596116-11596135 Msa0056090:CDS 45.0%
TCACGGAGTTAAAGTCACAG+TGG + chr1_2:11596244-11596263 Msa0056090:CDS 45.0%
!! ATTGGGCTGGTAATAGTGAG+GGG - chr1_2:11596283-11596302 None:intergenic 45.0%
!! CATTGGGCTGGTAATAGTGA+GGG - chr1_2:11596284-11596303 None:intergenic 45.0%
!! TCATTGGGCTGGTAATAGTG+AGG - chr1_2:11596285-11596304 None:intergenic 45.0%
TGTCTTCAAGATCATTGGGC+TGG - chr1_2:11596296-11596315 None:intergenic 45.0%
TATCGTTGTTCTACGCTGCA+AGG + chr1_2:11596343-11596362 Msa0056090:intron 45.0%
TTGCCATCGGAGTCCTTAAT+AGG + chr1_2:11596909-11596928 Msa0056090:intron 45.0%
GTTCCTATTAAGGACTCCGA+TGG - chr1_2:11596915-11596934 None:intergenic 45.0%
CTACCATTGTGGATGCTCTA+AGG - chr1_2:11597070-11597089 None:intergenic 45.0%
GGTAAGGATAGGAACATGAG+GGG - chr1_2:11597268-11597287 None:intergenic 45.0%
CTGGTAAGGATAGGAACATG+AGG - chr1_2:11597270-11597289 None:intergenic 45.0%
! GGCCCATAAAATGATTTGGG+AGG - chr1_2:11597332-11597351 None:intergenic 45.0%
GGGCCTGCTTGAAAAATACT+TGG + chr1_2:11597347-11597366 Msa0056090:intron 45.0%
AGTGTTAGACCCAGTGACAT+TGG + chr1_2:11597380-11597399 Msa0056090:intron 45.0%
ATCATGCCTCCAATGTCACT+GGG - chr1_2:11597392-11597411 None:intergenic 45.0%
ATCTCAAAGAAAATGCCCCG+TGG + chr1_2:11597824-11597843 Msa0056090:CDS 45.0%
TGGTGTCTCCTCCGATATAT+CGG + chr1_2:11598057-11598076 Msa0056090:three_prime_UTR 45.0%
CTCAACTTCCGATATATCGG+AGG - chr1_2:11598068-11598087 None:intergenic 45.0%
CCGATATATCGGAAGTTGAG+TGG + chr1_2:11598068-11598087 Msa0056090:three_prime_UTR 45.0%
! GCTGCTTTATTGAACCTCGT+TGG + chr1_2:11598121-11598140 Msa0056090:three_prime_UTR 45.0%
! GCTTTATTGAACCTCGTTGG+TGG + chr1_2:11598124-11598143 Msa0056090:three_prime_UTR 45.0%
!! TTGAACCTCGTTGGTGGTAA+TGG + chr1_2:11598130-11598149 Msa0056090:three_prime_UTR 45.0%
!!! CGGTGTTGTTGATTTTTCGC+TGG + chr1_2:11598160-11598179 Msa0056090:three_prime_UTR 45.0%
GTGGTTATTCATTGCACCTG+TGG + chr1_2:11598280-11598299 Msa0056090:three_prime_UTR 45.0%
!!! TTTAAATTTATAATTAGTTT+AGG - chr1_2:11582662-11582681 None:intergenic 5.0%
!!! ATTGTATATAATAATTTTTA+GGG - chr1_2:11583440-11583459 None:intergenic 5.0%
!! TTAAATAATTCAATTAATAA+TGG + chr1_2:11588926-11588945 Msa0056090:intron 5.0%
!! TATAACTATTAAATATTTAT+GGG - chr1_2:11589028-11589047 None:intergenic 5.0%
!! TTATAACTATTAAATATTTA+TGG - chr1_2:11589029-11589048 None:intergenic 5.0%
!!! TTTTAAAATAAATAAAATGA+TGG + chr1_2:11589079-11589098 Msa0056090:intron 5.0%
!! TTAATATACATATTATTTAT+AGG - chr1_2:11589177-11589196 None:intergenic 5.0%
!! TATAAATAATATGTATATTA+AGG + chr1_2:11589176-11589195 Msa0056090:intron 5.0%
!! AAATCTTAATATTTATTATT+AGG - chr1_2:11593195-11593214 None:intergenic 5.0%
!! TAATAATAAATATTAAGATT+TGG + chr1_2:11593194-11593213 Msa0056090:intron 5.0%
!! AAAAAAAAAAAAAAAAACTA+AGG - chr1_2:11596573-11596592 None:intergenic 5.0%
!!! AAAAATTTTTGTTTTATTTT+TGG - chr1_2:11596755-11596774 None:intergenic 5.0%
!! TAAAAAATTATAAATAAATG+AGG + chr1_2:11596941-11596960 Msa0056090:intron 5.0%
AATTGGAGACGTAGCTTCGC+CGG + chr1_2:11582212-11582231 Msa0056090:five_prime_UTR 50.0%
ACATTGCCGTTAACAGGGGA+AGG - chr1_2:11582350-11582369 None:intergenic 50.0%
AGTCAAACCACTAGAGACCG+AGG + chr1_2:11582632-11582651 Msa0056090:intron 50.0%
TTGAAAGTGGGTCGGCTACA+TGG - chr1_2:11582745-11582764 None:intergenic 50.0%
!! TGCTCGCCATTTTCACTGCA+AGG - chr1_2:11583301-11583320 None:intergenic 50.0%
!! AGCTGGTGAAGTAGCTTGCT+TGG - chr1_2:11583528-11583547 None:intergenic 50.0%
GTGGGAAAGCTAGTGGAGTT+TGG + chr1_2:11583554-11583573 Msa0056090:CDS 50.0%
AGAGTTCCTCGTAGATCGTC+TGG + chr1_2:11583623-11583642 Msa0056090:CDS 50.0%
GAGAAGCTGCAATGTTGGCA+AGG + chr1_2:11583795-11583814 Msa0056090:CDS 50.0%
AAAGAGATGCTGCAGCGACA+CGG + chr1_2:11584619-11584638 Msa0056090:CDS 50.0%
!! CTGTCTAGTCTCTGAGACAG+AGG + chr1_2:11585509-11585528 Msa0056090:intron 50.0%
GCTGTACAATGGAGGCAACA+AGG + chr1_2:11585590-11585609 Msa0056090:intron 50.0%
GGTAGTATGCACGAGGTTCT+AGG - chr1_2:11585622-11585641 None:intergenic 50.0%
ATTTGGGCACATGACACCGA+CGG - chr1_2:11585771-11585790 None:intergenic 50.0%
! CGCTTTTGATCGCGGAAAGT+TGG + chr1_2:11585854-11585873 Msa0056090:intron 50.0%
AAAAAAGCGGTCAGAGCAGG+CGG + chr1_2:11586662-11586681 Msa0056090:CDS 50.0%
GCAGGCGGACAATGTAAATG+AGG + chr1_2:11586677-11586696 Msa0056090:CDS 50.0%
GATTTCCTTGCCCAACCTAG+AGG - chr1_2:11587119-11587138 None:intergenic 50.0%
! GGGCAAGGAAATCTAGGACA+AGG + chr1_2:11587126-11587145 Msa0056090:intron 50.0%
!! GCGGCGTTGATCAAGAAAAG+AGG + chr1_2:11587778-11587797 Msa0056090:CDS 50.0%
! TTCTGAACAAGAGGCATGGG+AGG + chr1_2:11588307-11588326 Msa0056090:CDS 50.0%
!! ATCAAGGCATCGGTGATGGA+TGG + chr1_2:11588739-11588758 Msa0056090:CDS 50.0%
!! CTCTGATGCCGACTTTGCTT+TGG - chr1_2:11588884-11588903 None:intergenic 50.0%
CAAAGCAAAGTCGGCATCAG+AGG + chr1_2:11588882-11588901 Msa0056090:CDS 50.0%
TGGATCTAGTCTCTCCTGGA+GGG + chr1_2:11589206-11589225 Msa0056090:intron 50.0%
AACAGATACTACCTCCGTCC+CGG + chr1_2:11589272-11589291 Msa0056090:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr1_2:11589481-11589500 Msa0056090:intron 50.0%
!! TGCCAAAAAAAACGGGCTGC+AGG + chr1_2:11589588-11589607 Msa0056090:intron 50.0%
!! GCCAAAAAAAACGGGCTGCA+GGG + chr1_2:11589589-11589608 Msa0056090:intron 50.0%
!! CCAAAAAAAACGGGCTGCAG+GGG + chr1_2:11589590-11589609 Msa0056090:intron 50.0%
TACGATTATGGACGAGGTGG+TGG + chr1_2:11589717-11589736 Msa0056090:intron 50.0%
!! CGAGGTGGTGGAACTACAAA+AGG + chr1_2:11589729-11589748 Msa0056090:intron 50.0%
TTATCGGGAGGAATTGCTCC+AGG + chr1_2:11590183-11590202 Msa0056090:CDS 50.0%
CCACACTCATAGCAGCAACA+CGG - chr1_2:11591009-11591028 None:intergenic 50.0%
! GCTCGAGTTGCTCACGAATT+AGG + chr1_2:11591031-11591050 Msa0056090:CDS 50.0%
! TGGGTACTCCATCCGTTTTG+AGG + chr1_2:11591304-11591323 Msa0056090:CDS 50.0%
CATCCGCCATTCAACTCACT+TGG - chr1_2:11591607-11591626 None:intergenic 50.0%
GTAGTCAGCTTCTGGTGCTT+TGG - chr1_2:11592016-11592035 None:intergenic 50.0%
!! TCGTTCTGGAAGAACAGGTC+CGG + chr1_2:11592434-11592453 Msa0056090:CDS 50.0%
TATGGATCCTCCACCTACTG+AGG + chr1_2:11592602-11592621 Msa0056090:CDS 50.0%
AATAAGGCCTCAGTAGGTGG+AGG - chr1_2:11592612-11592631 None:intergenic 50.0%
!! TGAGGCCTTATTGAAAGCCC+TGG + chr1_2:11592620-11592639 Msa0056090:CDS 50.0%
AACCAAGGTAGGTAGACGGA+TGG + chr1_2:11592686-11592705 Msa0056090:CDS 50.0%
TCCGTGTATGGGAGAGAACT+AGG - chr1_2:11593013-11593032 None:intergenic 50.0%
TTCTCTCCCATACACGGAGT+AGG + chr1_2:11593015-11593034 Msa0056090:intron 50.0%
TCTCTCCCATACACGGAGTA+GGG + chr1_2:11593016-11593035 Msa0056090:intron 50.0%
! TACCGTAGCCTTTTCCCACT+GGG + chr1_2:11593877-11593896 Msa0056090:intron 50.0%
TGGTCGCTCCTTAGACACAA+AGG - chr1_2:11593940-11593959 None:intergenic 50.0%
! ATTCTCCCCGGTGCTAACTT+GGG - chr1_2:11594203-11594222 None:intergenic 50.0%
! ATTCTCCCCGGTGCTAACTT+GGG - chr1_2:11594203-11594222 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+AGG + chr1_2:11594219-11594238 Msa0056090:intron 50.0%
GATATCCGTGATCAACTCGC+AGG + chr1_2:11594759-11594778 Msa0056090:CDS 50.0%
! ACCGCAATTTGAAGCCATGG+TGG + chr1_2:11595245-11595264 Msa0056090:intron 50.0%
GTGATGACCTCGACTCAGAA+AGG + chr1_2:11595267-11595286 Msa0056090:intron 50.0%
GACCTCGACTCAGAAAGGTA+TGG + chr1_2:11595272-11595291 Msa0056090:intron 50.0%
! CTCTAGGGACGACAAGAGAT+TGG + chr1_2:11595321-11595340 Msa0056090:intron 50.0%
GAGTCGAGCACAATTCCCTT+AGG + chr1_2:11596365-11596384 Msa0056090:intron 50.0%
CCGATGGCAATACACTAACG+CGG - chr1_2:11596899-11596918 None:intergenic 50.0%
CCGCGTTAGTGTATTGCCAT+CGG + chr1_2:11596896-11596915 Msa0056090:intron 50.0%
GTTAGACCCAGTGACATTGG+AGG + chr1_2:11597383-11597402 Msa0056090:intron 50.0%
CATCATGCCTCCAATGTCAC+TGG - chr1_2:11597393-11597412 None:intergenic 50.0%
CTTGGCTACCTTGAGCTTGA+TGG - chr1_2:11597537-11597556 None:intergenic 50.0%
AAGAAAATGCCCCGTGGAGA+AGG + chr1_2:11597830-11597849 Msa0056090:CDS 50.0%
ATACCTGGCGGCGTTTCTCA+CGG - chr1_2:11582281-11582300 None:intergenic 55.0%
AGGTCTTCCTCGGTCTCTAG+TGG - chr1_2:11582642-11582661 None:intergenic 55.0%
TTAATCGGGCCGGCCCAAAA+AGG + chr1_2:11583061-11583080 Msa0056090:intron 55.0%
!! TTGCGGGCTACGGCCTTTTT+GGG - chr1_2:11583077-11583096 None:intergenic 55.0%
!! TTTGCGGGCTACGGCCTTTT+TGG - chr1_2:11583078-11583097 None:intergenic 55.0%
AACAGACACCCGTGCGTTTG+TGG + chr1_2:11583586-11583605 Msa0056090:CDS 55.0%
GGGTTTGGGTAGTATGCACG+AGG - chr1_2:11585629-11585648 None:intergenic 55.0%
TTTGGGCACATGACACCGAC+GGG - chr1_2:11585770-11585789 None:intergenic 55.0%
! GAAGTCCTCTAGGTTGGGCA+AGG + chr1_2:11587111-11587130 Msa0056090:intron 55.0%
TGGGATAGGATCCTCGGCAA+AGG + chr1_2:11587647-11587666 Msa0056090:intron 55.0%
GGGATAGGATCCTCGGCAAA+GGG + chr1_2:11587648-11587667 Msa0056090:intron 55.0%
GGATAGGATCCTCGGCAAAG+GGG + chr1_2:11587649-11587668 Msa0056090:intron 55.0%
TCCTCGGCAAAGGGGTCATT+TGG + chr1_2:11587657-11587676 Msa0056090:intron 55.0%
CCTCGGCAAAGGGGTCATTT+GGG + chr1_2:11587658-11587677 Msa0056090:intron 55.0%
CTGTGGCTATGCAGCGTTAC+AGG + chr1_2:11587805-11587824 Msa0056090:CDS 55.0%
GCAGTGGATCTAGTCTCTCC+TGG + chr1_2:11589202-11589221 Msa0056090:intron 55.0%
GTGGATCTAGTCTCTCCTGG+AGG + chr1_2:11589205-11589224 Msa0056090:intron 55.0%
TTGCATTAACCGGTCCCTCC+AGG - chr1_2:11589223-11589242 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG - chr1_2:11589286-11589305 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr1_2:11589485-11589504 Msa0056090:intron 55.0%
!!! CCCCTGCAGCCCGTTTTTTT+TGG - chr1_2:11589593-11589612 None:intergenic 55.0%
CTGTTCATGACCACCAGGCA+TGG + chr1_2:11590206-11590225 Msa0056090:intron 55.0%
AAAAGGGGGGTAACCATGCC+TGG - chr1_2:11590222-11590241 None:intergenic 55.0%
! CCGTGTTGCTGCTATGAGTG+TGG + chr1_2:11591006-11591025 Msa0056090:CDS 55.0%
GCAACTTGAGATCAGGTCGG+AGG - chr1_2:11591888-11591907 None:intergenic 55.0%
TTTCGTGCCCCTTCAGGAGT+TGG - chr1_2:11592249-11592268 None:intergenic 55.0%
! AACTCCTGAAGGGGCACGAA+AGG + chr1_2:11592248-11592267 Msa0056090:CDS 55.0%
ACAACCTTTCGTGCCCCTTC+AGG - chr1_2:11592255-11592274 None:intergenic 55.0%
ACCAGCTCGTTGCATTGCTG+AGG - chr1_2:11592415-11592434 None:intergenic 55.0%
ATGCAACGAGCTGGTCGTTC+TGG + chr1_2:11592420-11592439 Msa0056090:CDS 55.0%
!! GCTGGTCGTTCTGGAAGAAC+AGG + chr1_2:11592429-11592448 Msa0056090:CDS 55.0%
!! CGTTCTGGAAGAACAGGTCC+GGG + chr1_2:11592435-11592454 Msa0056090:CDS 55.0%
CAGGTCCGGGAAAATGCTTC+CGG + chr1_2:11592448-11592467 Msa0056090:CDS 55.0%
TGCCATCCGTCTACCTACCT+TGG - chr1_2:11592691-11592710 None:intergenic 55.0%
! CTACCGTAGCCTTTTCCCAC+TGG + chr1_2:11593876-11593895 Msa0056090:intron 55.0%
CACCCAGTGGGAAAAGGCTA+CGG - chr1_2:11593882-11593901 None:intergenic 55.0%
! GTAGCCTTTTCCCACTGGGT+GGG + chr1_2:11593881-11593900 Msa0056090:intron 55.0%
! TAGCCTTTTCCCACTGGGTG+GGG + chr1_2:11593882-11593901 Msa0056090:intron 55.0%
AAACCCCACCCAGTGGGAAA+AGG - chr1_2:11593888-11593907 None:intergenic 55.0%
GTAGTCAAACCCCACCCAGT+GGG - chr1_2:11593894-11593913 None:intergenic 55.0%
TGTAGTCAAACCCCACCCAG+TGG - chr1_2:11593895-11593914 None:intergenic 55.0%
TAGCCCACCCAAGTTAGCAC+CGG + chr1_2:11594193-11594212 Msa0056090:intron 55.0%
! GATTCTCCCCGGTGCTAACT+TGG - chr1_2:11594204-11594223 None:intergenic 55.0%
GTCTCAGGTTCGATTCTCCC+CGG - chr1_2:11594215-11594234 None:intergenic 55.0%
TAGCCCACCCAAGTTAGCAC+CGG + chr1_2:11594193-11594212 Msa0056090:intron 55.0%
! GATTCTCCCCGGTGCTAACT+TGG - chr1_2:11594204-11594223 None:intergenic 55.0%
GTCTCAGGTTCGATTCTCCC+CGG - chr1_2:11594215-11594234 None:intergenic 55.0%
! GTGCTACTCCTCAAGGTCTC+AGG - chr1_2:11594525-11594544 None:intergenic 55.0%
! TGGGAGTGTGCTACTCCTCA+AGG - chr1_2:11594532-11594551 None:intergenic 55.0%
TTGAGGAGTAGCACACTCCC+AGG + chr1_2:11594531-11594550 Msa0056090:intron 55.0%
AGTCGAGGTCATCACCACCA+TGG - chr1_2:11595262-11595281 None:intergenic 55.0%
AAGTGCCAGTTGTGTGCAGC+TGG - chr1_2:11595539-11595558 None:intergenic 55.0%
! GGCCCTTAGAGCATCCACAA+TGG + chr1_2:11597064-11597083 Msa0056090:intron 55.0%
TCTCTGCACGTCCTTCTCCA+CGG - chr1_2:11597844-11597863 None:intergenic 55.0%
GCGGCTTCAGCTGCGTATTC+CGG - chr1_2:11582234-11582253 None:intergenic 60.0%
GATTTCTTTGCGGCGGCGAG+CGG - chr1_2:11582253-11582272 None:intergenic 60.0%
AAACCGTGAGAAACGCCGCC+AGG + chr1_2:11582275-11582294 Msa0056090:five_prime_UTR 60.0%
TGTCCAAGCCCGGCTCTTTG+CGG - chr1_2:11583094-11583113 None:intergenic 60.0%
AGATGCTGCAGCGACACGGA+AGG + chr1_2:11584623-11584642 Msa0056090:CDS 60.0%
CCCAAATGACCCCTTTGCCG+AGG - chr1_2:11587661-11587680 None:intergenic 60.0%
CTAGTCTCTCCTGGAGGGAC+CGG + chr1_2:11589211-11589230 Msa0056090:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr1_2:11589484-11589503 Msa0056090:intron 60.0%
CTTTGCTACTCCCTCCGTCC+CGG - chr1_2:11589498-11589517 None:intergenic 60.0%
CCTGGTGGTCATGAACAGCC+TGG - chr1_2:11590204-11590223 None:intergenic 60.0%
CCAGGCTGTTCATGACCACC+AGG + chr1_2:11590201-11590220 Msa0056090:CDS 60.0%
CTCATAGCAGCAACACGGCG+TGG - chr1_2:11591004-11591023 None:intergenic 60.0%
!! TCCAGGGAGAAGGTATCCGG+TGG + chr1_2:11591978-11591997 Msa0056090:CDS 60.0%
TCCACCGGATACCTTCTCCC+TGG - chr1_2:11591982-11592001 None:intergenic 60.0%
GCCTCAGCAATGCAACGAGC+TGG + chr1_2:11592411-11592430 Msa0056090:CDS 60.0%
! CGTAGCCTTTTCCCACTGGG+TGG + chr1_2:11593880-11593899 Msa0056090:intron 60.0%
AGCCCACCCAAGTTAGCACC+GGG + chr1_2:11594194-11594213 Msa0056090:intron 60.0%
! TCCCCGGTGCTAACTTGGGT+GGG - chr1_2:11594199-11594218 None:intergenic 60.0%
AGCCCACCCAAGTTAGCACC+GGG + chr1_2:11594194-11594213 Msa0056090:intron 60.0%
! TCCCCGGTGCTAACTTGGGT+GGG - chr1_2:11594199-11594218 None:intergenic 60.0%
TGCCACAACGCTAGCCCAAG+TGG + chr1_2:11594565-11594584 Msa0056090:intron 60.0%
GCCACAACGCTAGCCCAAGT+GGG + chr1_2:11594566-11594585 Msa0056090:intron 60.0%
!! ACCCACTTGGGCTAGCGTTG+TGG - chr1_2:11594570-11594589 None:intergenic 60.0%
CATACACCCTAGTTCGGGGC+TGG + chr1_2:11595012-11595031 Msa0056090:CDS 60.0%
GGATGCCAGCTGCACACAAC+TGG + chr1_2:11595531-11595550 Msa0056090:intron 60.0%
TCTGCACGTCCTTCTCCACG+GGG - chr1_2:11597842-11597861 None:intergenic 60.0%
CTCTGCACGTCCTTCTCCAC+GGG - chr1_2:11597843-11597862 None:intergenic 60.0%
AAGGACGTGCAGAGAACCGC+AGG + chr1_2:11597849-11597868 Msa0056090:CDS 60.0%
!! GGGCTACGGCCTTTTTGGGC+CGG - chr1_2:11583073-11583092 None:intergenic 65.0%
GTCCAAGCCCGGCTCTTTGC+GGG - chr1_2:11583093-11583112 None:intergenic 65.0%
AGGGGGGTAACCATGCCTGG+TGG - chr1_2:11590219-11590238 None:intergenic 65.0%
GCCCACCCAAGTTAGCACCG+GGG + chr1_2:11594195-11594214 Msa0056090:intron 65.0%
! CTCCCCGGTGCTAACTTGGG+TGG - chr1_2:11594200-11594219 None:intergenic 65.0%
GCCCACCCAAGTTAGCACCG+GGG + chr1_2:11594195-11594214 Msa0056090:intron 65.0%
! CTCCCCGGTGCTAACTTGGG+TGG - chr1_2:11594200-11594219 None:intergenic 65.0%
CCTGTGCCAGCCCCGAACTA+GGG - chr1_2:11595021-11595040 None:intergenic 65.0%
ACCTGTGCCAGCCCCGAACT+AGG - chr1_2:11595022-11595041 None:intergenic 65.0%
! CGGGGCTGGCACAGGTACTT+TGG + chr1_2:11595026-11595045 Msa0056090:intron 65.0%
GGCCGTAGCCCGCAAAGAGC+CGG + chr1_2:11583082-11583101 Msa0056090:intron 70.0%
GCCGTAGCCCGCAAAGAGCC+GGG + chr1_2:11583083-11583102 Msa0056090:intron 70.0%
! GCCCGGCTCTTTGCGGGCTA+CGG - chr1_2:11583087-11583106 None:intergenic 70.0%
AGCCCGCAAAGAGCCGGGCT+TGG + chr1_2:11583088-11583107 Msa0056090:intron 70.0%
! CCCTAGTTCGGGGCTGGCAC+AGG + chr1_2:11595018-11595037 Msa0056090:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 11582139 11598388 11582139 ID=Msa0056090;Name=Msa0056090
chr1_2 mRNA 11582139 11598388 11582139 ID=Msa0056090-mRNA-1;Parent=Msa0056090;Name=Msa0056090-mRNA-1;_AED=0.11;_eAED=0.11;_QI=163|1|1|1|0.92|0.86|29|454|1060
chr1_2 exon 11582139 11582296 11582139 ID=Msa0056090-mRNA-1:exon:4403;Parent=Msa0056090-mRNA-1
chr1_2 exon 11583306 11583410 11583306 ID=Msa0056090-mRNA-1:exon:4404;Parent=Msa0056090-mRNA-1
chr1_2 exon 11583525 11583652 11583525 ID=Msa0056090-mRNA-1:exon:4405;Parent=Msa0056090-mRNA-1
chr1_2 exon 11583776 11583988 11583776 ID=Msa0056090-mRNA-1:exon:4406;Parent=Msa0056090-mRNA-1
chr1_2 exon 11584094 11584165 11584094 ID=Msa0056090-mRNA-1:exon:4407;Parent=Msa0056090-mRNA-1
chr1_2 exon 11584558 11584644 11584558 ID=Msa0056090-mRNA-1:exon:4408;Parent=Msa0056090-mRNA-1
chr1_2 exon 11585136 11585169 11585136 ID=Msa0056090-mRNA-1:exon:4409;Parent=Msa0056090-mRNA-1
chr1_2 exon 11585287 11585341 11585287 ID=Msa0056090-mRNA-1:exon:4410;Parent=Msa0056090-mRNA-1
chr1_2 exon 11585917 11585976 11585917 ID=Msa0056090-mRNA-1:exon:4411;Parent=Msa0056090-mRNA-1
chr1_2 exon 11586151 11586222 11586151 ID=Msa0056090-mRNA-1:exon:4412;Parent=Msa0056090-mRNA-1
chr1_2 exon 11586635 11586698 11586635 ID=Msa0056090-mRNA-1:exon:4413;Parent=Msa0056090-mRNA-1
chr1_2 exon 11587747 11587826 11587747 ID=Msa0056090-mRNA-1:exon:4414;Parent=Msa0056090-mRNA-1
chr1_2 exon 11588274 11588341 11588274 ID=Msa0056090-mRNA-1:exon:4415;Parent=Msa0056090-mRNA-1
chr1_2 exon 11588453 11588510 11588453 ID=Msa0056090-mRNA-1:exon:4416;Parent=Msa0056090-mRNA-1
chr1_2 exon 11588711 11588768 11588711 ID=Msa0056090-mRNA-1:exon:4417;Parent=Msa0056090-mRNA-1
chr1_2 exon 11588844 11588918 11588844 ID=Msa0056090-mRNA-1:exon:4418;Parent=Msa0056090-mRNA-1
chr1_2 exon 11590154 11590222 11590154 ID=Msa0056090-mRNA-1:exon:4419;Parent=Msa0056090-mRNA-1
chr1_2 exon 11590431 11590520 11590431 ID=Msa0056090-mRNA-1:exon:4420;Parent=Msa0056090-mRNA-1
chr1_2 exon 11590986 11591072 11590986 ID=Msa0056090-mRNA-1:exon:4421;Parent=Msa0056090-mRNA-1
chr1_2 exon 11591302 11591417 11591302 ID=Msa0056090-mRNA-1:exon:4422;Parent=Msa0056090-mRNA-1
chr1_2 exon 11591499 11591565 11591499 ID=Msa0056090-mRNA-1:exon:4423;Parent=Msa0056090-mRNA-1
chr1_2 exon 11591874 11592914 11591874 ID=Msa0056090-mRNA-1:exon:4424;Parent=Msa0056090-mRNA-1
chr1_2 exon 11593394 11593456 11593394 ID=Msa0056090-mRNA-1:exon:4425;Parent=Msa0056090-mRNA-1
chr1_2 exon 11594735 11594858 11594735 ID=Msa0056090-mRNA-1:exon:4426;Parent=Msa0056090-mRNA-1
chr1_2 exon 11594939 11595039 11594939 ID=Msa0056090-mRNA-1:exon:4427;Parent=Msa0056090-mRNA-1
chr1_2 exon 11596090 11596152 11596090 ID=Msa0056090-mRNA-1:exon:4428;Parent=Msa0056090-mRNA-1
chr1_2 exon 11596243 11596315 11596243 ID=Msa0056090-mRNA-1:exon:4429;Parent=Msa0056090-mRNA-1
chr1_2 exon 11597822 11597990 11597822 ID=Msa0056090-mRNA-1:exon:4430;Parent=Msa0056090-mRNA-1
chr1_2 exon 11598039 11598388 11598039 ID=Msa0056090-mRNA-1:exon:4431;Parent=Msa0056090-mRNA-1
chr1_2 five_prime_UTR 11582139 11582296 11582139 ID=Msa0056090-mRNA-1:five_prime_utr;Parent=Msa0056090-mRNA-1
chr1_2 five_prime_UTR 11583306 11583310 11583306 ID=Msa0056090-mRNA-1:five_prime_utr;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11583311 11583410 11583311 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11583525 11583652 11583525 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11583776 11583988 11583776 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11584094 11584165 11584094 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11584558 11584644 11584558 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11585136 11585169 11585136 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11585287 11585341 11585287 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11585917 11585976 11585917 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11586151 11586222 11586151 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11586635 11586698 11586635 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11587747 11587826 11587747 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11588274 11588341 11588274 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11588453 11588510 11588453 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11588711 11588768 11588711 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11588844 11588918 11588844 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11590154 11590222 11590154 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11590431 11590520 11590431 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11590986 11591072 11590986 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11591302 11591417 11591302 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11591499 11591565 11591499 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11591874 11592914 11591874 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11593394 11593456 11593394 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11594735 11594858 11594735 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11594939 11595039 11594939 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11596090 11596152 11596090 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11596243 11596315 11596243 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 CDS 11597822 11597886 11597822 ID=Msa0056090-mRNA-1:cds;Parent=Msa0056090-mRNA-1
chr1_2 three_prime_UTR 11597887 11597990 11597887 ID=Msa0056090-mRNA-1:three_prime_utr;Parent=Msa0056090-mRNA-1
chr1_2 three_prime_UTR 11598039 11598388 11598039 ID=Msa0056090-mRNA-1:three_prime_utr;Parent=Msa0056090-mRNA-1
Gene Sequence

>Msa0056090

ATGGCGAGCAATGACAATTTAAAGAGATGGGTATCTGATAAGTTGATGTCACTGCTTGGATATTCTCAACCCACAATTGTACAGTACATCATTGGACTATCCAAGCAAGCTACTTCACCAGCTGATTTAGTGGGAAAGCTAGTGGAGTTTGGGTTCTCATCAACAGACACCCGTGCGTTTGTGGAAGAAATTTTCTCTAGAGTTCCTCGTAGATCGTCTGGCTTAAATCAATATCAAAAACAAGAGAGAGAAGCTGCAATGTTGGCAAGGAAACAGCGGACTTACACAATTTTGAAGGATGATGACTGTATCGATAATGACCATATTGTTAGTGGTGATGATAAATCATCGATAACTACTGCTTCTACATCTAGAAAGCCAGACAGTCATAAAAAACGTTTTAGGAAGAAAACTGAAGTTCAAGATGATCAAGAAGATGAGGTAAGTTCAAGGAAAGAAAGGGAAAGACAAGTTAAGAGAAGAATTACCCTTGATGAAGATAGTGGTTCAGAGTCAGAAGAAGAAAGATTGAAAGATCAAAGGGAAAAGGATGAATTAGTGCAGCATATGAGAGAAAGAGATGCTGCAGCGACACGGAAGTTGACTGAACAAAAATTAACACGAAAGGAAGAAGACGAAGCAATTCGAAGATCTAATGCTGCAGAACATGATGATATGTGCTGTTTGAGAAAGTATTCACGACAAGAATACTTGAAGAAAAGAGAGGAAAAGAAATTAGAAGAACTGAGAGATGATATAGAAGATGAGCAATATCTATTTGAAGGTGTGAAGCTTTCAGAAGTGGAACAGCGTGAGTTAAGGCACAAGAAAGAGCTATATGAACTTATAAAAAAGCGGTCAGAGCAGGCGGACAATGTAAATGAGTATAGAATGCCAGACACTTATGATAAGGAAGGCGGCGTTGATCAAGAAAAGAGGTTTTCTGTGGCTATGCAGCGTTACAGGGATTCAAATGCTGAGGAAAAGATGAATCCATTTTCTGAACAAGAGGCATGGGAGGAACATCAAATTGGAAAGGCAACACTGAAGTATGGCTCCAAAAATAAAAAGCAAGCCTCTGATGATTACCAGTTTGTGTTCGAGGACCAAATCGATTTTATCAAGGCATCGGTGATGGATGGAGATAAGTTTAATTACGATGAGATGGCAGATTCAATTGAAAAGTCCAAAGCAAAGTCGGCATCAGAGGCATTTGCAATTCAGGAGGAGAGAAAGAAATTACCCATTTATACTTATCGGGAGGAATTGCTCCAGGCTGTTCATGACCACCAGGTACTTGTAATTGTTGGTGAAACCGGTTCTGGAAAGACTACACAAATTCCCCAATATCTTCATGAAGCTGGCTACACAAAACATGGAATGATTGCATGTACTCAACCACGCCGTGTTGCTGCTATGAGTGTGGCTGCTCGAGTTGCTCACGAATTAGGTGTTAAACTAGGACACGAGGTTGGGTACTCCATCCGTTTTGAGGATTGCACATCAGACAAGACTATTTTGAAATATATGACCGATGGAATGTTACTGAGAGAATTTCTTGGTGAGCCTGATCTGGCAAGTTATAGTGTTGTGATGGTGGATGAGGCTCATGAAAGAACACTCTCAACTGATATTTTGTTTGCATTAGTAAAGGATATTTCTCGCCTCCGACCTGATCTCAAGTTGCTGATATCAAGTGCTACACTTGATGCAGAAAAGTTCAGTAATTACTTTGATTCTGCTCCAATATTTAAAATTCCAGGGAGAAGGTATCCGGTGGAAATACACTTCACCAAAGCACCAGAAGCTGACTACTTAGATGCAGCTATTGTCACGGCACTTCAAATCCATGTTACTCAATCTCCTGGAGATATATTGATATTCCTTACTGGTCAAGAAGAAATTGAAACGGCTGAAGAAATCTTGAAGCATCGAACTAGAGGCTTAGGGACTAAAATTGCCGAATTAATTATATGTCCTATATATGCCAACTTACCAACTGAACTACAAGCTAAAATATTTGAACCAACTCCTGAAGGGGCACGAAAGGTTGTCCTTGCTACCAATATTGCAGAAACATCATTGACAATTGATGGAATAAAATATGTCATTGATCCAGGATTCGTTAAGATGAAAAGTTATAATCCAAAGACAGGAATGGAGTCTTTACTAGTGACTCCCATCTCAAAAGCCTCAGCAATGCAACGAGCTGGTCGTTCTGGAAGAACAGGTCCGGGAAAATGCTTCCGGTTGTATACTGCATACAATTTTCAAAATGATTTGGATGATAACACCGTTCCTGAAATACAACGGACTAATCTCGCAAATGTAGTTTTGACCTTAAAATGTCTTGGTATTGATGACTTGTTGCACTTTGAATTTATGGATCCTCCACCTACTGAGGCCTTATTGAAAGCCCTGGAGCTTCTATTTGCTTTAAATGCTTTAAATAAGCATGGTCAGTTAACCAAGGTAGGTAGACGGATGGCAGAGTTCCCACTTGATCCTATGTTGTCAAAAATGATAGTGGTTTCAGAAAAGTACAAGTGTTCAGATGACATCATTTCCATTGCTGCTATGCTTTCTATTGGAAACTCAATATTTTACCGTCCAAAGGATAAACAAGTGCATGCAGACAATGCAAGACTGAATTTTCACTCTGGAAATGTTGGAGACCATATTGCATTGCTAAAGGTTTACAATTCTTGGAAGGAGACCAATTATTCAACACAATGGTGTTATGAAAATTATATACAGGTAAGAAGTATGAAACAGGCGAGAGATATCCGTGATCAACTCGCAGGTCTATTAGAGAGGGTTGAGATCGAGCTTACTACAAATACTAATGATTCAGATGCCATCAAGAAATCTATAGCATCTGGATTTTTTCCACACACTGCAAAATTGCACAAAAACGGATCATATCGGACACTTAAACATGCACAGACTGTTGACATACACCCTAGTTCGGGGCTGGCACAGGTTCGTCCAAGATGCGTTGTGTACCATGAACTAGTGCTCACAACCAAGGAATATATGAGACAGATCACGGAGTTAAAGTCACAGTGGTTGTTGGAGATAGCCCCTCACTATTACCAGCCCAATGATCTTGAAGACACTATCTCAAAGAAAATGCCCCGTGGAGAAGGACGTGCAGAGAACCGCAGGAAGTACATTCGTTAG
Protein sequence

>Msa0056090

MASNDNLKRWVSDKLMSLLGYSQPTIVQYIIGLSKQATSPADLVGKLVEFGFSSTDTRAFVEEIFSRVPRRSSGLNQYQKQEREAAMLARKQRTYTILKDDDCIDNDHIVSGDDKSSITTASTSRKPDSHKKRFRKKTEVQDDQEDEVSSRKERERQVKRRITLDEDSGSESEEERLKDQREKDELVQHMRERDAAATRKLTEQKLTRKEEDEAIRRSNAAEHDDMCCLRKYSRQEYLKKREEKKLEELRDDIEDEQYLFEGVKLSEVEQRELRHKKELYELIKKRSEQADNVNEYRMPDTYDKEGGVDQEKRFSVAMQRYRDSNAEEKMNPFSEQEAWEEHQIGKATLKYGSKNKKQASDDYQFVFEDQIDFIKASVMDGDKFNYDEMADSIEKSKAKSASEAFAIQEERKKLPIYTYREELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTKHGMIACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFALVKDISRLRPDLKLLISSATLDAEKFSNYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTQSPGDILIFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVTPISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLANVVLTLKCLGIDDLLHFEFMDPPPTEALLKALELLFALNALNKHGQLTKVGRRMAEFPLDPMLSKMIVVSEKYKCSDDIISIAAMLSIGNSIFYRPKDKQVHADNARLNFHSGNVGDHIALLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTTNTNDSDAIKKSIASGFFPHTAKLHKNGSYRTLKHAQTVDIHPSSGLAQVRPRCVVYHELVLTTKEYMRQITELKSQWLLEIAPHYYQPNDLEDTISKKMPRGEGRAENRRKYIR*