AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0007660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0007660 MtrunA17_Chr3g0086391 92.681 1052 75 1 1 1052 1 1050 0.0 1922
Msa0007660 MtrunA17_Chr5g0432591 75.712 597 122 9 215 802 18 600 0.0 903
Msa0007660 MtrunA17_Chr6g0476001 72.330 618 133 10 131 745 4 586 0.0 866
Msa0007660 MtrunA17_Chr1g0156271 57.753 632 265 2 405 1036 561 1190 0.0 804
Msa0007660 MtrunA17_Chr1g0211961 56.804 632 271 2 405 1036 526 1155 0.0 797
Msa0007660 MtrunA17_Chr1g0194381 52.232 672 298 10 393 1045 35 702 0.0 714
Msa0007660 MtrunA17_Chr2g0329131 49.110 674 331 5 369 1032 522 1193 0.0 693
Msa0007660 MtrunA17_Chr3g0100131 48.071 674 338 5 369 1032 543 1214 0.0 684
Msa0007660 MtrunA17_Chr3g0099251 50.149 672 288 9 405 1032 46 714 0.0 675
Msa0007660 MtrunA17_Chr4g0044491 48.584 671 296 9 405 1056 49 689 0.0 650
Msa0007660 MtrunA17_Chr7g0259941 45.614 684 311 8 407 1032 41 721 0.0 620
Msa0007660 MtrunA17_Chr2g0283271 46.224 662 318 10 407 1037 46 700 0.0 617
Msa0007660 MtrunA17_Chr8g0359501 45.614 684 311 8 407 1032 41 721 0.0 617
Msa0007660 MtrunA17_Chr8g0377111 45.997 637 315 13 414 1027 4 634 0.0 566
Msa0007660 MtrunA17_Chr1g0148301 94.720 322 15 1 87 408 1 320 0.0 535
Msa0007660 MtrunA17_Chr5g0432601 79.464 224 46 0 829 1052 1 224 5.02e-129 390
Msa0007660 MtrunA17_Chr8g0354481 87.879 198 24 0 514 711 1 198 4.74e-118 361
Msa0007660 MtrunA17_Chr6g0475991 66.667 258 56 1 795 1052 1 228 5.68e-117 360
Msa0007660 MtrunA17_Chr3g0123681 35.606 660 373 17 407 1029 255 899 2.22e-104 360
Msa0007660 MtrunA17_Chr3g0082091 35.647 634 356 16 431 1029 4 620 2.88e-100 346
Msa0007660 MtrunA17_Chr1g0164621 35.276 635 359 17 431 1029 4 622 2.07e-99 343
Msa0007660 MtrunA17_Chr8g0354471 65.532 235 45 7 275 506 2 203 1.15e-88 283
Msa0007660 MtrunA17_Chr8g0354491 80.263 152 30 0 807 958 1 152 1.70e-84 270
Msa0007660 MtrunA17_Chr3g0100151 49.383 243 118 3 679 921 35 272 6.27e-73 243
Msa0007660 MtrunA17_Chr3g0100171 46.460 226 119 2 709 934 44 267 1.74e-66 231
Msa0007660 MtrunA17_Chr8g0359451 46.444 239 85 3 421 616 21 259 1.60e-62 214
Msa0007660 MtrunA17_Chr1g0177141 34.834 422 251 10 623 1025 543 959 3.89e-56 211
Msa0007660 MtrunA17_Chr1g0177141 47.120 191 97 1 411 597 265 455 6.53e-46 179
Msa0007660 MtrunA17_Chr4g0010901 41.065 263 122 5 407 636 265 527 6.60e-55 209
Msa0007660 MtrunA17_Chr4g0010901 28.970 466 237 9 656 1028 692 1156 1.58e-46 182
Msa0007660 MtrunA17_Chr1g0148291 84.906 106 9 1 955 1060 44 142 4.96e-54 184
Msa0007660 MtrunA17_Chr1g0208961 32.170 401 254 9 622 1010 607 1001 1.22e-51 198
Msa0007660 MtrunA17_Chr1g0208961 47.668 193 97 2 409 597 324 516 4.96e-44 174
Msa0007660 MtrunA17_Chr8g0392581 27.828 442 293 11 604 1025 533 968 3.33e-49 190
Msa0007660 MtrunA17_Chr8g0392581 46.632 193 99 1 409 597 268 460 1.67e-44 175
Msa0007660 MtrunA17_Chr0c12g0493631 32.620 374 227 8 604 955 130 500 9.37e-49 185
Msa0007660 MtrunA17_Chr8g0355291 29.146 398 260 11 604 984 508 900 4.22e-46 180
Msa0007660 MtrunA17_Chr8g0355291 48.705 193 95 1 409 597 244 436 1.06e-43 173
Msa0007660 MtrunA17_Chr5g0442401 30.854 363 231 8 623 969 554 912 1.34e-45 179
Msa0007660 MtrunA17_Chr5g0442401 36.283 226 129 3 387 597 158 383 2.69e-39 159
Msa0007660 MtrunA17_Chr1g0195601 29.959 484 266 14 407 834 23 489 5.07e-45 177
Msa0007660 MtrunA17_Chr1g0148311 95.062 81 4 0 1 81 1 81 4.32e-44 154
Msa0007660 MtrunA17_Chr4g0067511 45.745 188 102 0 656 843 341 528 5.76e-42 167
Msa0007660 MtrunA17_Chr4g0067511 35.252 139 63 3 525 636 38 176 1.62e-16 85.1
Msa0007660 MtrunA17_Chr4g0077061 40.000 200 107 3 411 597 602 801 7.77e-36 147
Msa0007660 MtrunA17_Chr4g0077061 34.375 288 157 8 604 885 888 1149 1.77e-35 146
Msa0007660 MtrunA17_Chr8g0355531 29.496 139 95 2 727 863 3 140 3.34e-18 83.2
Msa0007660 MtrunA17_Chr4g0067501 45.205 73 40 0 445 517 15 87 1.74e-15 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0007660 AT1G32490.1 74.478 1054 255 9 1 1052 1 1042 0.0 1615
Msa0007660 AT1G32490.2 73.814 1054 252 10 1 1052 1 1032 0.0 1590
Msa0007660 AT2G35340.1 71.510 1053 288 5 1 1052 1 1042 0.0 1575
Msa0007660 AT2G35340.2 75.028 901 222 2 152 1052 7 904 0.0 1433
Msa0007660 AT4G16680.2 66.624 779 240 6 272 1047 6 767 0.0 1072
Msa0007660 AT3G26560.1 56.811 646 277 2 391 1036 492 1135 0.0 803
Msa0007660 AT4G16680.1 64.452 557 182 3 271 827 84 624 0.0 729
Msa0007660 AT2G47250.1 51.187 674 306 10 390 1044 40 709 0.0 714
Msa0007660 AT3G62310.1 51.042 672 306 9 393 1045 39 706 0.0 712
Msa0007660 AT5G13010.1 49.927 683 330 5 369 1041 509 1189 0.0 708
Msa0007660 AT4G18465.1 48.228 649 312 8 407 1033 41 687 0.0 639
Msa0007660 AT1G26370.1 44.737 684 318 7 407 1033 34 714 0.0 601
Msa0007660 AT3G62310.3 56.212 491 201 3 393 869 39 529 0.0 577
Msa0007660 AT3G62310.2 56.818 484 195 3 393 862 39 522 0.0 573
Msa0007660 AT1G27900.1 44.741 637 328 11 414 1027 4 639 0.0 561
Msa0007660 AT1G27900.3 47.850 535 270 6 414 940 4 537 2.37e-174 521
Msa0007660 AT1G27900.2 47.850 535 270 6 414 940 4 537 6.54e-174 521
Msa0007660 AT5G10370.1 36.141 653 367 16 414 1031 306 943 1.09e-108 373
Msa0007660 AT4G01020.1 36.141 653 367 17 414 1031 303 940 4.73e-107 369
Msa0007660 AT1G58050.1 30.720 625 331 15 411 937 594 1214 2.25e-79 285
Msa0007660 AT5G14900.1 38.790 281 162 7 772 1045 2 279 4.80e-61 211
Msa0007660 AT2G35920.2 33.182 440 269 10 606 1025 427 861 9.96e-60 222
Msa0007660 AT2G35920.2 44.776 201 107 2 397 593 153 353 2.72e-46 181
Msa0007660 AT2G35920.1 33.182 440 269 10 606 1025 485 919 2.18e-59 222
Msa0007660 AT2G35920.1 44.776 201 107 2 397 593 211 411 3.93e-46 181
Msa0007660 AT2G35920.3 33.182 440 269 10 606 1025 517 951 2.56e-59 222
Msa0007660 AT2G35920.3 42.534 221 112 3 388 593 223 443 3.87e-46 181
Msa0007660 AT1G33390.2 38.516 283 140 4 407 655 234 516 6.44e-55 209
Msa0007660 AT1G33390.2 31.207 439 237 7 654 1028 645 1082 8.84e-55 209
Msa0007660 AT1G33390.1 38.516 283 140 4 407 655 234 516 6.44e-55 209
Msa0007660 AT1G33390.1 31.207 439 237 7 654 1028 645 1082 8.84e-55 209
Msa0007660 AT2G01130.2 31.841 402 258 7 620 1010 431 827 9.96e-52 198
Msa0007660 AT2G01130.2 45.320 203 107 1 399 597 140 342 6.62e-45 177
Msa0007660 AT2G01130.1 31.841 402 258 7 620 1010 496 892 1.07e-51 198
Msa0007660 AT2G01130.1 45.320 203 107 1 399 597 205 407 9.79e-45 176
Msa0007660 AT1G58060.1 30.083 482 266 12 604 1017 895 1373 2.21e-51 198
Msa0007660 AT1G58060.1 42.647 204 97 5 411 597 611 811 1.80e-36 150
Msa0007660 AT1G48650.2 30.023 443 281 13 604 1025 558 992 2.04e-47 185
Msa0007660 AT1G48650.2 46.798 203 100 2 411 609 296 494 6.27e-46 180
Msa0007660 AT1G48650.1 30.023 443 281 13 604 1025 558 992 2.59e-47 185
Msa0007660 AT1G48650.1 46.798 203 100 2 411 609 296 494 6.52e-46 180
Msa0007660 AT1G06670.2 33.245 379 231 9 623 984 576 949 5.24e-47 184
Msa0007660 AT1G06670.2 41.500 200 105 4 407 597 210 406 1.89e-41 166
Msa0007660 AT1G06670.1 33.245 379 231 10 623 984 576 949 6.23e-47 184
Msa0007660 AT1G06670.1 41.500 200 105 4 407 597 210 406 1.73e-41 167
Msa0007660 AT5G04895.1 45.274 201 106 1 401 597 247 447 1.44e-45 179
Msa0007660 AT5G04895.1 29.975 397 256 12 604 983 519 910 1.97e-45 179
Msa0007660 AT2G30800.2 31.044 364 229 10 623 969 209 567 1.06e-44 176
Msa0007660 AT2G30800.1 31.044 364 229 10 623 969 552 910 2.06e-44 176
Msa0007660 AT2G30800.1 40.933 193 108 2 407 593 180 372 2.60e-42 169
Msa0007660 AT2G47680.1 29.876 482 270 13 414 843 26 491 2.30e-36 149

Find 235 sgRNAs with CRISPR-Local

Find 1047 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATATATTATATATAAAT+AGG 0.146844 1_1:+10929594 None:intergenic
CTTGTTGCACTTTGAATTTA+TGG 0.177526 1_1:-10934929 Msa0007660:CDS
AGATTAGTCCGTTGTATTTC+AGG 0.194405 1_1:+10934994 None:intergenic
TTCCTCCCGATAAGTATAAA+TGG 0.197293 1_1:+10937311 None:intergenic
CATGCCTCTTGTTCAGAAAA+TGG 0.207622 1_1:+10939199 None:intergenic
CTGTGGCTATGCAGCGTTAC+AGG 0.216421 1_1:-10939696 Msa0007660:intron
AAAGACTCCATTCCTGTCTT+TGG 0.226123 1_1:+10935147 None:intergenic
TTTATTCCTTGCAGTGAAAA+TGG 0.232905 1_1:-10944208 Msa0007660:intron
ACACCATTGTGTTGAATAAT+TGG 0.239583 1_1:+10934098 None:intergenic
ACAAATAAAATTGTATTTGT+AGG 0.262153 1_1:+10929490 None:intergenic
GTGGGAAAGCTAGTGGAGTT+TGG 0.271397 1_1:-10943946 Msa0007660:CDS
GCTCCAATATTTAAAATTCC+AGG 0.300236 1_1:-10935552 Msa0007660:CDS
GCTCGAGTTGCTCACGAATT+AGG 0.308881 1_1:-10936482 Msa0007660:CDS
ATTGCTGCTATGCTTTCTAT+TGG 0.317382 1_1:-10934724 Msa0007660:CDS
ATGCAACGAGCTGGTCGTTC+TGG 0.323755 1_1:-10935093 Msa0007660:CDS
ACAACCTTTCGTGCCCCTTC+AGG 0.326868 1_1:+10935261 None:intergenic
CAATGATGTTTCTGCAATAT+TGG 0.329045 1_1:+10935230 None:intergenic
GCCAGCTTCATGAAGATATT+GGG 0.329381 1_1:+10937031 None:intergenic
GCATGCACTTGTTTATCCTT+TGG 0.340825 1_1:+10934682 None:intergenic
ATCAGAGGCATTTGCAATTC+AGG 0.344723 1_1:-10938604 Msa0007660:intron
AATTACCCATTTATACTTAT+CGG 0.347344 1_1:-10937317 Msa0007660:CDS
GAAACATCATTGACAATTGA+TGG 0.350686 1_1:-10935219 Msa0007660:CDS
GATATATTGATATTCCTTAC+TGG 0.351891 1_1:-10935423 Msa0007660:CDS
ATTGTTGGTGAAACCGGTTC+TGG 0.354130 1_1:-10937071 Msa0007660:CDS
AAGCTCCAGGGCTTTCAATA+AGG 0.355213 1_1:+10934888 None:intergenic
CTCTGATGCCGACTTTGCTT+TGG 0.357796 1_1:+10938620 None:intergenic
TTGAACCTCGTTGGTGGTAA+TGG 0.360128 1_1:-10929700 Msa0007660:three_prime_UTR
TGGGAAAGCTAGTGGAGTTT+GGG 0.365327 1_1:-10943945 Msa0007660:CDS
CTTGTAATTGTTGGTGAAAC+CGG 0.367977 1_1:-10937077 Msa0007660:CDS
CATACTGTCTTCAAGATCAT+TGG 0.369946 1_1:+10931507 None:intergenic
AGCCTGATCTGGCAAGTTAT+AGG 0.373072 1_1:-10936117 Msa0007660:intron
GCATCTAAGTAGTCAGCTTC+TGG 0.375050 1_1:+10935492 None:intergenic
CTCTGCACGTCCTTCTCCAC+GGG 0.380162 1_1:+10929968 None:intergenic
AGCCAGCTTCATGAAGATAT+TGG 0.382933 1_1:+10937030 None:intergenic
ATGCCTTGATAAAATCGATT+TGG 0.390099 1_1:+10938775 None:intergenic
CCACTCAACTTCCGATATAT+CGG 0.390259 1_1:+10929762 None:intergenic
AAGCATCGAACTAGAGGCTT+AGG 0.390683 1_1:-10935366 Msa0007660:CDS
GTAGTCAGCTTCTGGTGCTT+TGG 0.393469 1_1:+10935500 None:intergenic
AGAAAGATTGAAAGATCAAA+GGG 0.396158 1_1:-10942934 Msa0007660:CDS
GAACCTTTAGCAATGCAATA+TGG 0.398379 1_1:+10934617 None:intergenic
AAATATATTATATATAAATA+GGG 0.400158 1_1:+10929595 None:intergenic
AACAGACACCCGTGCGTTTG+TGG 0.400171 1_1:-10943914 Msa0007660:CDS
GTTGGTAAGTTGGCATATAT+AGG 0.400851 1_1:+10935315 None:intergenic
TATAGGACATATAATTAATT+CGG 0.402494 1_1:+10935332 None:intergenic
ATTTCTTGGTGAGCCTGATC+TGG 0.405349 1_1:-10936128 Msa0007660:CDS
TGGTTGTGAGCACTAGTTCA+TGG 0.410005 1_1:+10931694 None:intergenic
CACCTATAACTTGCCAGATC+AGG 0.410649 1_1:+10936115 None:intergenic
ATTACCCATTTATACTTATC+GGG 0.413830 1_1:-10937316 Msa0007660:CDS
GGAAAGGCAACACTGAAGTA+TGG 0.421539 1_1:-10939049 Msa0007660:CDS
TATCATCACCACTAACAATA+TGG 0.422069 1_1:+10943632 None:intergenic
GCATGGGAGGAACATCAAAT+TGG 0.423699 1_1:-10939181 Msa0007660:intron
TTGTGTAGTCTTTCCAGAAC+CGG 0.423779 1_1:+10937058 None:intergenic
AAACAGGTACTTGTAATTGT+TGG 0.440991 1_1:-10937086 Msa0007660:intron
GATGAGCAATATCTATTTGA+AGG 0.443140 1_1:-10941337 Msa0007660:CDS
TGTATGTAGGTTTGTGTTCG+AGG 0.444416 1_1:-10938799 Msa0007660:intron
TTGAGTGGTGGTTGATTTGA+AGG 0.444883 1_1:-10929747 Msa0007660:three_prime_UTR
CAATTTCTTCTTGACCAGTA+AGG 0.444892 1_1:+10935409 None:intergenic
GATAATGACCATATTGTTAG+TGG 0.445192 1_1:-10943640 Msa0007660:CDS
ATAAAATATGTCATTGATCC+AGG 0.451351 1_1:-10935195 Msa0007660:CDS
TACTTCACCAGCTGATTTAG+TGG 0.452442 1_1:-10943965 Msa0007660:CDS
TTTCGTGCCCCTTCAGGAGT+TGG 0.453404 1_1:+10935267 None:intergenic
AAGGACGTGCAGAGAACCGC+AGG 0.454719 1_1:-10929959 Msa0007660:CDS
ATCAAGAAATCTATAGCATC+TGG 0.457130 1_1:-10932972 Msa0007660:intron
TTAGGTAAGAAGTATGAAAC+AGG 0.458237 1_1:-10933078 Msa0007660:intron
TGTTGACATACACCCTAGTT+CGG 0.460180 1_1:-10932802 Msa0007660:CDS
AGATGCTATAGATTTCTTGA+TGG 0.460694 1_1:+10932974 None:intergenic
ATTACCCTTGATGAAGATAG+TGG 0.461633 1_1:-10943364 Msa0007660:CDS
CAGGTCCGGGAAAATGCTTC+CGG 0.462742 1_1:-10935065 Msa0007660:CDS
TGGTGTCTCCTCCGATATAT+CGG 0.464267 1_1:-10929773 Msa0007660:three_prime_UTR
TACCTGTCTCATATATTCCT+TGG 0.466265 1_1:+10931674 None:intergenic
GTTAAAGTCACAGTGGTTGT+TGG 0.466697 1_1:-10931554 Msa0007660:CDS
AGAGTTCCTCGTAGATCGTC+TGG 0.468538 1_1:-10943877 Msa0007660:CDS
ATTGCACCTGTGGATAAAGT+TGG 0.468770 1_1:-10929540 Msa0007660:three_prime_UTR
AGACCATATTGCATTGCTAA+AGG 0.469557 1_1:-10934620 Msa0007660:intron
ACAATTGTACAGTACATCAT+TGG 0.470196 1_1:-10944117 Msa0007660:CDS
ATTGAAAGATCAAAGGGAAA+AGG 0.471022 1_1:-10942928 Msa0007660:CDS
AAGAAAATGCCCCGTGGAGA+AGG 0.471143 1_1:-10929978 Msa0007660:CDS
AATTGTATGCAGTATACAAC+CGG 0.472110 1_1:+10935046 None:intergenic
AAGTGGAACAGCGTGAGTTA+AGG 0.473874 1_1:-10941300 Msa0007660:intron
TCCTCCCGATAAGTATAAAT+GGG 0.473885 1_1:+10937312 None:intergenic
GCTGGTCGTTCTGGAAGAAC+AGG 0.475155 1_1:-10935084 Msa0007660:CDS
CCCCAATATCTTCATGAAGC+TGG 0.475172 1_1:-10937032 Msa0007660:CDS
AAGAAAGATTGAAAGATCAA+AGG 0.475191 1_1:-10942935 Msa0007660:CDS
ACCTGTGCCAGCCCCGAACT+AGG 0.477695 1_1:+10932789 None:intergenic
GTTGACATACACCCTAGTTC+GGG 0.478577 1_1:-10932801 Msa0007660:CDS
GTGTTATGAAAATTATATAC+AGG 0.478728 1_1:-10934079 Msa0007660:intron
ATCCATGTTACTCAATCTCC+TGG 0.480603 1_1:-10935447 Msa0007660:CDS
ATACTGTCTTCAAGATCATT+GGG 0.482974 1_1:+10931508 None:intergenic
CAACAATGCAGGTAAGTTCA+AGG 0.483223 1_1:-10943417 Msa0007660:intron
GCAATGACAATTTAAAGAGA+TGG 0.483789 1_1:-10944182 Msa0007660:CDS
AATTCCAGGGAGAAGGTATC+CGG 0.486709 1_1:-10935538 Msa0007660:CDS
TCATGGTACACAACGCATCT+TGG 0.487314 1_1:+10931711 None:intergenic
TCGTTCTGGAAGAACAGGTC+CGG 0.488085 1_1:-10935079 Msa0007660:CDS
AGGAATATCAATATATCTCC+AGG 0.491393 1_1:+10935429 None:intergenic
AAACCGTCAGAAACGCCGCC+AGG 0.492540 1_1:-10945202 Msa0007660:intron
AGGTAAGTTCAAGGAAAGAA+AGG 0.492616 1_1:-10943408 Msa0007660:CDS
TTGTAGTTCAGTTGGTAAGT+TGG 0.494861 1_1:+10935305 None:intergenic
GACGGTTTATGATTTCTTTG+CGG 0.497044 1_1:+10945217 None:intergenic
CTAATATTGTAGTGTTGTGA+TGG 0.497399 1_1:-10936026 Msa0007660:intron
CCTTCCTTATCATAAGTGTC+TGG 0.497584 1_1:+10939745 None:intergenic
AGCTGGTGAAGTAGCTTGCT+TGG 0.497637 1_1:+10943975 None:intergenic
TCTCTGCACGTCCTTCTCCA+CGG 0.501082 1_1:+10929967 None:intergenic
TGAGGCCTTATTGAAAGCCC+TGG 0.503893 1_1:-10934893 Msa0007660:CDS
TTCAATAAGGCCTCAGTAGG+TGG 0.504917 1_1:+10934901 None:intergenic
AAAAGTTATAATCCAAAGAC+AGG 0.505829 1_1:-10935159 Msa0007660:CDS
AATGCCAGACACTTATGATA+AGG 0.508097 1_1:-10939749 Msa0007660:CDS
TTAAATGCTTTAAATAAGCA+TGG 0.512174 1_1:-10934856 Msa0007660:CDS
ATGTTACTGAGAGAATTTCT+TGG 0.512332 1_1:-10936142 Msa0007660:CDS
AATAGAAAGCATAGCAGCAA+TGG 0.513412 1_1:+10934726 None:intergenic
TAGTGTTGTGATGGTGGATG+AGG 0.516430 1_1:-10936017 Msa0007660:CDS
GATATCAGCAACTTGAGATC+AGG 0.516577 1_1:+10935621 None:intergenic
GCTTTATTGAACCTCGTTGG+TGG 0.517861 1_1:-10929706 Msa0007660:three_prime_UTR
ATGATGATATGTGCTGTTTG+AGG 0.517977 1_1:-10942180 Msa0007660:intron
TTAAAGCAAATAGAAGCTCC+AGG 0.519132 1_1:+10934875 None:intergenic
ATCGGTGATGGATGGAGATA+AGG 0.522162 1_1:-10938754 Msa0007660:intron
GAAGTACATTCGTTAGAAAG+TGG 0.522319 1_1:-10929937 Msa0007660:exon
CCTGTGCCAGCCCCGAACTA+GGG 0.522753 1_1:+10932790 None:intergenic
CTCCAATATTTAAAATTCCA+GGG 0.524324 1_1:-10935551 Msa0007660:CDS
GCTGCTTTATTGAACCTCGT+TGG 0.524864 1_1:-10929709 Msa0007660:three_prime_UTR
TTGAAGGAACAAATCATTGT+CGG 0.525786 1_1:-10929731 Msa0007660:three_prime_UTR
CTGAACCACTATCTTCATCA+AGG 0.525792 1_1:+10943359 None:intergenic
CAATGACAATTTAAAGAGAT+GGG 0.527977 1_1:-10944181 Msa0007660:CDS
CCCTAGTTCGGGGCTGGCAC+AGG 0.529477 1_1:-10932790 Msa0007660:intron
GATTTCTTTGCGGCGGCGAG+CGG 0.529586 1_1:+10945227 None:intergenic
AACTCCTGAAGGGGCACGAA+AGG 0.530127 1_1:-10935265 Msa0007660:CDS
AGAGAGAGAAGCTGCAATGT+TGG 0.534326 1_1:-10943710 Msa0007660:CDS
AGCTTTCCCACTAAATCAGC+TGG 0.539528 1_1:+10943958 None:intergenic
ATACCTGGCGGCGTTTCTGA+CGG 0.540525 1_1:+10945199 None:intergenic
ATCAAGGCATCGGTGATGGA+TGG 0.540775 1_1:-10938762 Msa0007660:CDS
TTGGTGAAGTGTATTTCCAC+CGG 0.541108 1_1:+10935519 None:intergenic
GCCTCAGCAATGCAACGAGC+TGG 0.542261 1_1:-10935102 Msa0007660:CDS
GCAGTTTAATTACGATGAGA+TGG 0.542455 1_1:-10938661 Msa0007660:intron
CCAGGTTTACAATTCTTGGA+AGG 0.543423 1_1:-10934124 Msa0007660:intron
CGTTCTGGAAGAACAGGTCC+GGG 0.543431 1_1:-10935078 Msa0007660:CDS
TTATCGGGAGGAATTGCTCC+AGG 0.543928 1_1:-10937301 Msa0007660:CDS
CCAGGCTGTTCATGACCACC+AGG 0.545799 1_1:-10937283 Msa0007660:intron
CTCCAGGAGATTGAGTAACA+TGG 0.546725 1_1:+10935445 None:intergenic
AGGTGTGAAGCTTTCAGAAG+TGG 0.547984 1_1:-10941317 Msa0007660:CDS
TATTTAAAATTCCAGGGAGA+AGG 0.552271 1_1:-10935545 Msa0007660:CDS
CAAAGCAAAGTCGGCATCAG+AGG 0.552593 1_1:-10938619 Msa0007660:CDS
ATATTTGAACCAACTCCTGA+AGG 0.552635 1_1:-10935276 Msa0007660:CDS
AGCATCGAACTAGAGGCTTA+GGG 0.553519 1_1:-10935365 Msa0007660:CDS
TGTCTTCAAGATCATTGGGC+TGG 0.553996 1_1:+10931512 None:intergenic
TTCTGAACAAGAGGCATGGG+AGG 0.554659 1_1:-10939194 Msa0007660:CDS
TATTTGAACCAACTCCTGAA+GGG 0.558480 1_1:-10935275 Msa0007660:CDS
GATAAGTTGATGTCACTGCT+TGG 0.562270 1_1:-10944153 Msa0007660:CDS
ATATTGTAGTGTTGTGATGG+TGG 0.565373 1_1:-10936023 Msa0007660:intron
TACAAACCAACTTTATCCAC+AGG 0.567145 1_1:+10929534 None:intergenic
ACCAGCTCGTTGCATTGCTG+AGG 0.567730 1_1:+10935101 None:intergenic
GGTAAGTTCAAGGAAAGAAA+GGG 0.567833 1_1:-10943407 Msa0007660:CDS
TCCACCGGATACCTTCTCCC+TGG 0.569655 1_1:+10935534 None:intergenic
TTTCTGCAATATTGGTAGCA+AGG 0.571378 1_1:+10935238 None:intergenic
AACCAAGGAATATATGAGAC+AGG 0.572507 1_1:-10931676 Msa0007660:intron
TTGTGAACTTAAGTCACAGA+TGG 0.572563 1_1:-10929471 Msa0007660:three_prime_UTR
AGTCCGTTGTATTTCAGGAA+CGG 0.574985 1_1:+10934999 None:intergenic
GCACTTGTTTATCCTTTGGA+CGG 0.575029 1_1:+10934686 None:intergenic
TGAAAAGTCCAAAGCAAAGT+CGG 0.575985 1_1:-10938628 Msa0007660:CDS
TGCCATCCGTCTACCTACCT+TGG 0.577604 1_1:+10934825 None:intergenic
AATTTCTTCCACAAACGCAC+GGG 0.579411 1_1:+10943906 None:intergenic
CATACACCCTAGTTCGGGGC+TGG 0.580060 1_1:-10932796 Msa0007660:CDS
TGGTCAAGAAGAAATTGAAA+CGG 0.580204 1_1:-10935403 Msa0007660:CDS
CACGAATTAGGTGTTAAACT+AGG 0.581838 1_1:-10936470 Msa0007660:CDS
AAAAGAAATTAGAAGAACTG+AGG 0.584487 1_1:-10941546 Msa0007660:intron
AAATTTCTTCCACAAACGCA+CGG 0.585934 1_1:+10943905 None:intergenic
TGGCTACACAAAACATGGAA+TGG 0.586250 1_1:-10937012 Msa0007660:intron
TTATAATCCAAAGACAGGAA+TGG 0.587107 1_1:-10935154 Msa0007660:CDS
GCGGCGTTGATCAAGAAAAG+AGG 0.587462 1_1:-10939723 Msa0007660:CDS
ATGATGTACTGTACAATTGT+GGG 0.587763 1_1:+10944120 None:intergenic
ATCTTGAAGCATCGAACTAG+AGG 0.588718 1_1:-10935372 Msa0007660:CDS
TTTGACAACATAGGATCAAG+TGG 0.590587 1_1:+10934796 None:intergenic
AAATTAACACGAAAGGAAGA+AGG 0.591634 1_1:-10942352 Msa0007660:intron
AACTCGCAGGTCTATTAGAG+AGG 0.593385 1_1:-10933037 Msa0007660:CDS
CATTGGGCTGGTAATAGTGA+GGG 0.595617 1_1:+10931524 None:intergenic
AATGATGTACTGTACAATTG+TGG 0.596474 1_1:+10944119 None:intergenic
TTCTCTCAGTAACATTCCAT+CGG 0.597057 1_1:+10936150 None:intergenic
TCAAGATGATCAAGAAGATG+AGG 0.598731 1_1:-10943533 Msa0007660:intron
CAATAGGGATTCAAATGCTG+AGG 0.601241 1_1:-10939233 Msa0007660:intron
CTGATGTGCAATCCTCAAAA+CGG 0.602256 1_1:+10936197 None:intergenic
ATAGACCTGCGAGTTGATCA+CGG 0.603466 1_1:+10933045 None:intergenic
CATGGTCAGTTAACCAAGGT+AGG 0.603597 1_1:-10934838 Msa0007660:CDS
CCTGGTGGTCATGAACAGCC+TGG 0.603608 1_1:+10937283 None:intergenic
ACTTCACCAGCTGATTTAGT+GGG 0.604883 1_1:-10943964 Msa0007660:CDS
CCGATATATCGGAAGTTGAG+TGG 0.605601 1_1:-10929762 Msa0007660:three_prime_UTR
GTGGTTATTCATTGCACCTG+TGG 0.605863 1_1:-10929550 Msa0007660:three_prime_UTR
TAAAGCAAATAGAAGCTCCA+GGG 0.607651 1_1:+10934876 None:intergenic
TGATGAAGATAGTGGTTCAG+AGG 0.608695 1_1:-10943356 Msa0007660:intron
GCAGGCGGACAATGTAAATG+AGG 0.610136 1_1:-10940824 Msa0007660:intron
GAGAAGCTGCAATGTTGGCA+AGG 0.611056 1_1:-10943705 Msa0007660:CDS
GCTTTCAATAAGGCCTCAGT+AGG 0.611250 1_1:+10934898 None:intergenic
TGTGCAATCCTCAAAACGGA+TGG 0.611786 1_1:+10936201 None:intergenic
CCAGCTTCATGAAGATATTG+GGG 0.612263 1_1:+10937032 None:intergenic
AATAAGGCCTCAGTAGGTGG+AGG 0.613182 1_1:+10934904 None:intergenic
GAAGCTGGCTACACAAAACA+TGG 0.615560 1_1:-10937017 Msa0007660:CDS
AAAGAGATGCTGCAGCGACA+CGG 0.616391 1_1:-10942881 Msa0007660:CDS
ATTTGAACCAACTCCTGAAG+GGG 0.617393 1_1:-10935274 Msa0007660:CDS
CCAGACACTTATGATAAGGA+AGG 0.618945 1_1:-10939745 Msa0007660:CDS
TTGACAACATAGGATCAAGT+GGG 0.619054 1_1:+10934797 None:intergenic
GATATCCGTGATCAACTCGC+AGG 0.622187 1_1:-10933050 Msa0007660:CDS
TGATTTAGTGGGAAAGCTAG+TGG 0.623101 1_1:-10943953 Msa0007660:CDS
AGATGCTGCAGCGACACGGA+AGG 0.626124 1_1:-10942877 Msa0007660:intron
TCATTGGGCTGGTAATAGTG+AGG 0.626565 1_1:+10931523 None:intergenic
CCGTGTTGCTGCTATGAGTG+TGG 0.626901 1_1:-10936507 Msa0007660:CDS
AGAATACTTGAAGAAAAGAG+AGG 0.628022 1_1:-10941569 Msa0007660:CDS
CTTAGATGCAGCTATTGTCA+CGG 0.630129 1_1:-10935478 Msa0007660:CDS
TATGGATCCTCCACCTACTG+AGG 0.632354 1_1:-10934911 Msa0007660:CDS
CCACACTCATAGCAGCAACA+CGG 0.633863 1_1:+10936507 None:intergenic
GGTTTATGATTTCTTTGCGG+CGG 0.634843 1_1:+10945220 None:intergenic
ACCCATTTATACTTATCGGG+AGG 0.636238 1_1:-10937313 Msa0007660:CDS
AACTTACTGGTAATCATCAG+AGG 0.636448 1_1:+10939006 None:intergenic
GACACTTATGATAAGGAAGG+CGG 0.642296 1_1:-10939742 Msa0007660:CDS
ACTCGCAGGTCTATTAGAGA+GGG 0.649165 1_1:-10933036 Msa0007660:CDS
TGAACCACTATCTTCATCAA+GGG 0.651196 1_1:+10943360 None:intergenic
AACCAAGGTAGGTAGACGGA+TGG 0.651340 1_1:-10934827 Msa0007660:CDS
TCCAGGGAGAAGGTATCCGG+TGG 0.655814 1_1:-10935535 Msa0007660:CDS
CTCATAGCAGCAACACGGCG+TGG 0.668107 1_1:+10936512 None:intergenic
AGACCAATTATTCAACACAA+TGG 0.671069 1_1:-10934101 Msa0007660:CDS
AGTTAACCAAGGTAGGTAGA+CGG 0.674267 1_1:-10934831 Msa0007660:CDS
ATTGGGCTGGTAATAGTGAG+GGG 0.677716 1_1:+10931525 None:intergenic
GCAACTTGAGATCAGGTCGG+AGG 0.678991 1_1:+10935628 None:intergenic
TGAACTAGTGCTCACAACCA+AGG 0.679202 1_1:-10931691 Msa0007660:CDS
CTCAACTTCCGATATATCGG+AGG 0.681852 1_1:+10929765 None:intergenic
CAATGTTGGCAAGGAAACAG+CGG 0.684749 1_1:-10943696 Msa0007660:CDS
TAAGCATGGTCAGTTAACCA+AGG 0.687119 1_1:-10934842 Msa0007660:CDS
TTGGTGGTAATGGAAATTGA+CGG 0.687338 1_1:-10929690 Msa0007660:three_prime_UTR
TCTAACGAATGTACTTCCTG+CGG 0.687433 1_1:+10929943 None:intergenic
ACACCGTTCCTGAAATACAA+CGG 0.689022 1_1:-10935002 Msa0007660:CDS
TTGACATACACCCTAGTTCG+GGG 0.689250 1_1:-10932800 Msa0007660:CDS
ATATATCGGAAGTTGAGTGG+TGG 0.693892 1_1:-10929759 Msa0007660:three_prime_UTR
TCAGCAACTTGAGATCAGGT+CGG 0.700568 1_1:+10935625 None:intergenic
ATCTCAAAGAAAATGCCCCG+TGG 0.718376 1_1:-10929984 Msa0007660:CDS
AATTTCCATTACCACCAACG+AGG 0.727578 1_1:+10929695 None:intergenic
AGGTGTTAAACTAGGACACG+AGG 0.732412 1_1:-10936462 Msa0007660:intron
TCTGCACGTCCTTCTCCACG+GGG 0.743537 1_1:+10929969 None:intergenic
TCACGGAGTTAAAGTCACAG+TGG 0.770894 1_1:-10931561 Msa0007660:CDS
TTTAAGCCAGACGATCTACG+AGG 0.785498 1_1:+10943871 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAAAAATAATAAAT+AGG + chr1_1:10930230-10930249 None:intergenic 0.0%
!! AAATATATTATATATAAATA+GGG + chr1_1:10945112-10945131 None:intergenic 0.0%
!! AAAATATATTATATATAAAT+AGG + chr1_1:10945113-10945132 None:intergenic 0.0%
!! TTTCACAATTTATTTAAATT+TGG - chr1_1:10929702-10929721 Msa0007660:three_prime_UTR 10.0%
!! TTCACAATTTATTTAAATTT+GGG - chr1_1:10929703-10929722 Msa0007660:three_prime_UTR 10.0%
!!! AAATAAAAGTTTTAGTTAAT+CGG - chr1_1:10930250-10930269 Msa0007660:intron 10.0%
!!! GATTGTATATAATAATTTTT+AGG + chr1_1:10930645-10930664 None:intergenic 10.0%
!!! ATTATTATATACAATCATTT+TGG - chr1_1:10930649-10930668 Msa0007660:intron 10.0%
!!! ATATTTCATTAATATCATTT+TGG - chr1_1:10930698-10930717 Msa0007660:intron 10.0%
!! CAAATATATAAAAATATACA+AGG + chr1_1:10934690-10934709 None:intergenic 10.0%
!!! CTTGTATATTTTTATATATT+TGG - chr1_1:10934688-10934707 Msa0007660:CDS 10.0%
!!! TTATATTTTTTTGGAAAATT+GGG - chr1_1:10934831-10934850 Msa0007660:CDS 10.0%
!!! ATTGATTTTTTTTATCAATA+GGG - chr1_1:10935456-10935475 Msa0007660:CDS 10.0%
!!! TAAGTCATTTTTTTTTTTAA+AGG - chr1_1:10937774-10937793 Msa0007660:intron 10.0%
!!! ATTTTTTTTTTTAAAGGAAT+AGG - chr1_1:10937780-10937799 Msa0007660:intron 10.0%
!!! TAAGTCATTTTTTTTTTAAA+AGG - chr1_1:10937836-10937855 Msa0007660:intron 10.0%
!!! ATTTTTTTTTTAAAAGGAAT+AGG - chr1_1:10937842-10937861 Msa0007660:intron 10.0%
!! TGTTATATGAATAATTTAAT+TGG + chr1_1:10940792-10940811 None:intergenic 10.0%
!! ACAAAAAAAAAAAAAAACTA+AGG + chr1_1:10943472-10943491 None:intergenic 10.0%
!!! TTTTTTTTTTTTGTTGATTT+TGG - chr1_1:10943478-10943497 Msa0007660:intron 10.0%
!!! CAAAATTTTTGTTTTATTTT+TGG + chr1_1:10943652-10943671 None:intergenic 10.0%
!!! TGTATTTTTATTTTTCTTTT+TGG - chr1_1:10945066-10945085 Msa0007660:intron 10.0%
!!! AATAAAAGTTTTAGTTAATC+GGG - chr1_1:10930251-10930270 Msa0007660:intron 15.0%
!!! ATAAACATTTTTTAACATGA+TGG - chr1_1:10930434-10930453 Msa0007660:intron 15.0%
!!! AAAATAAATAAGCCTAATTT+TGG + chr1_1:10930479-10930498 None:intergenic 15.0%
!! TTACAAAAAAAAGAAAATAG+AGG + chr1_1:10931541-10931560 None:intergenic 15.0%
!! AAGAAATTAAAATCAACATT+TGG + chr1_1:10932449-10932468 None:intergenic 15.0%
!!! AAATGTTGATTTTAATTTCT+TGG - chr1_1:10932448-10932467 Msa0007660:intron 15.0%
!!! AGAAGAAGAAATATATTTTT+GGG - chr1_1:10932636-10932655 Msa0007660:intron 15.0%
!!! CTATATGTTGTTTTTTATTT+GGG + chr1_1:10932990-10933009 None:intergenic 15.0%
!!! ACTATATGTTGTTTTTTATT+TGG + chr1_1:10932991-10933010 None:intergenic 15.0%
!! CAAATTAATATTTGATATCT+TGG - chr1_1:10933248-10933267 Msa0007660:intron 15.0%
!! AATATAACTATAGAAGATTA+AGG + chr1_1:10933307-10933326 None:intergenic 15.0%
!! TATATGAACTTATAAAAAAG+CGG - chr1_1:10933852-10933871 Msa0007660:intron 15.0%
!! ATATTTATTATATCATTACG+TGG - chr1_1:10933937-10933956 Msa0007660:intron 15.0%
!! TATTTATTATATCATTACGT+GGG - chr1_1:10933938-10933957 Msa0007660:intron 15.0%
!!! ATATATGTTTTGTTAAATAG+TGG - chr1_1:10934588-10934607 Msa0007660:intron 15.0%
!!! TATATGTTTTGTTAAATAGT+GGG - chr1_1:10934589-10934608 Msa0007660:intron 15.0%
!!! CTTATATTTTTTTGGAAAAT+TGG - chr1_1:10934830-10934849 Msa0007660:CDS 15.0%
!! GACAATAATATAAAAAGAAA+AGG - chr1_1:10935063-10935082 Msa0007660:CDS 15.0%
!! AATATAAAAAGAAAAGGAAA+AGG - chr1_1:10935069-10935088 Msa0007660:CDS 15.0%
!! ATATAAAAAGAAAAGGAAAA+GGG - chr1_1:10935070-10935089 Msa0007660:CDS 15.0%
!! ATATTGTATATTCCTAATAA+AGG + chr1_1:10935179-10935198 None:intergenic 15.0%
!!! CATTGATTTTTTTTATCAAT+AGG - chr1_1:10935455-10935474 Msa0007660:CDS 15.0%
!! TATTCTTAATAATATCTTCT+AGG - chr1_1:10935634-10935653 Msa0007660:CDS 15.0%
!!! TTTTTACAATTTATGTATGT+AGG - chr1_1:10935892-10935911 Msa0007660:intron 15.0%
!!! GAGAAGTTTTTAATTAAATA+AGG - chr1_1:10936321-10936340 Msa0007660:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - chr1_1:10936531-10936550 Msa0007660:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - chr1_1:10936532-10936551 Msa0007660:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr1_1:10936613-10936632 Msa0007660:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr1_1:10936614-10936633 Msa0007660:intron 15.0%
!! TTGTGTAAATTTAAATTCAT+AGG + chr1_1:10937137-10937156 None:intergenic 15.0%
!!! ATTTTTTATGTTCATACAAT+AGG - chr1_1:10937750-10937769 Msa0007660:intron 15.0%
!! TACATATAAATAATATAACG+AGG + chr1_1:10937897-10937916 None:intergenic 15.0%
!!! TGTACTTTTATTTTTACAAT+TGG - chr1_1:10937913-10937932 Msa0007660:intron 15.0%
!! TATAGGACATATAATTAATT+CGG + chr1_1:10939375-10939394 None:intergenic 15.0%
!!! ATACAATTTTCAAAATGATT+TGG - chr1_1:10939673-10939692 Msa0007660:intron 15.0%
!!! TACTCATTATTATTTTGATT+TGG + chr1_1:10940350-10940369 None:intergenic 15.0%
!! CTGGAAAAAAATTATTAATA+AGG + chr1_1:10940564-10940583 None:intergenic 15.0%
!!! CTTATTAATAATTTTTTTCC+AGG - chr1_1:10940562-10940581 Msa0007660:intron 15.0%
!!! ATGCTATCATTTTTTTTATT+AGG - chr1_1:10941024-10941043 Msa0007660:intron 15.0%
!!! TGCTATCATTTTTTTTATTA+GGG - chr1_1:10941025-10941044 Msa0007660:intron 15.0%
!! AAGAAGAATTTGAATTTAAA+TGG + chr1_1:10941150-10941169 None:intergenic 15.0%
!!! TTTTATTGGTAAAAATTCAT+AGG + chr1_1:10942631-10942650 None:intergenic 15.0%
!!! TTATATTGTTGTTTTATCTA+TGG - chr1_1:10942772-10942791 Msa0007660:intron 15.0%
!! GAAAAAATTCATAAAACATT+TGG + chr1_1:10943074-10943093 None:intergenic 15.0%
!!! TGTTTTATGAATTTTTTCAA+TGG - chr1_1:10943076-10943095 Msa0007660:intron 15.0%
!!! TCAATATTTAAAACCAAATT+AGG + chr1_1:10943292-10943311 None:intergenic 15.0%
!!! AATAAAACAAAAATTTTGTG+AGG - chr1_1:10943654-10943673 Msa0007660:CDS 15.0%
!!! AACATCTCATTTTATTTTTT+AGG - chr1_1:10943682-10943701 Msa0007660:CDS 15.0%
!!! ACATCTCATTTTATTTTTTA+GGG - chr1_1:10943683-10943702 Msa0007660:CDS 15.0%
!!! TCAAATTTTGATGTATTTAT+AGG - chr1_1:10943713-10943732 Msa0007660:CDS 15.0%
!!! CAAATTTTGATGTATTTATA+GGG - chr1_1:10943714-10943733 Msa0007660:CDS 15.0%
!! AAACTAGATTAAAAGATTAA+GGG + chr1_1:10943757-10943776 None:intergenic 15.0%
!! AAAACTAGATTAAAAGATTA+AGG + chr1_1:10943758-10943777 None:intergenic 15.0%
!! TTTAATAAAAGTTCCTATTA+AGG + chr1_1:10943821-10943840 None:intergenic 15.0%
!! AAAACATATTTCAATTGAAA+AGG + chr1_1:10944536-10944555 None:intergenic 15.0%
!! ACAAATAAAATTGTATTTGT+AGG + chr1_1:10945217-10945236 None:intergenic 15.0%
!!! TATTAGTTCTTAATCTTAAC+TGG - chr1_1:10930072-10930091 Msa0007660:intron 20.0%
!!! GAATTCTTATGTATTTTTCT+TGG - chr1_1:10930121-10930140 Msa0007660:intron 20.0%
!!! CTAATTTTGGATAAAAAAAG+TGG + chr1_1:10930466-10930485 None:intergenic 20.0%
!!! CACTTTTTTTATCCAAAATT+AGG - chr1_1:10930464-10930483 Msa0007660:intron 20.0%
!! ACAGAAATAATTATTATCTG+CGG - chr1_1:10930928-10930947 Msa0007660:intron 20.0%
!! AATATGAAAGTGAATCTAAT+AGG + chr1_1:10931211-10931230 None:intergenic 20.0%
!! AACAAAATTAATCAAACAAG+TGG + chr1_1:10931454-10931473 None:intergenic 20.0%
!! GCTAAAAAATATAAATCTGA+CGG + chr1_1:10931484-10931503 None:intergenic 20.0%
!! TGTTCTCAAAAAGAAAAAAA+AGG - chr1_1:10931580-10931599 Msa0007660:intron 20.0%
!! TATGGATAAAAGAAGAAAAT+TGG - chr1_1:10931976-10931995 Msa0007660:intron 20.0%
!! TCTGATTATATAACTGTAAT+GGG - chr1_1:10932085-10932104 Msa0007660:intron 20.0%
!! AAACAAGTTCCTAAAATTAT+GGG + chr1_1:10932244-10932263 None:intergenic 20.0%
!! AAAACAAGTTCCTAAAATTA+TGG + chr1_1:10932245-10932264 None:intergenic 20.0%
!!! CAGAAGAAGAAATATATTTT+TGG - chr1_1:10932635-10932654 Msa0007660:intron 20.0%
!!! GAAGAAGAAATATATTTTTG+GGG - chr1_1:10932637-10932656 Msa0007660:intron 20.0%
!!! AAGAAGAAATATATTTTTGG+GGG - chr1_1:10932638-10932657 Msa0007660:intron 20.0%
!! CCATAAGAAAATAAATGAAA+CGG + chr1_1:10933197-10933216 None:intergenic 20.0%
!! TTAGAATAAAAGAAAGACTA+TGG - chr1_1:10933570-10933589 Msa0007660:intron 20.0%
!! ATATCTTATGTATCTTTAGA+AGG - chr1_1:10933782-10933801 Msa0007660:intron 20.0%
!! ATTAATCAATACAATCAAGA+GGG - chr1_1:10934019-10934038 Msa0007660:intron 20.0%
!! AATAGTGATTTAAAGATGAA+GGG + chr1_1:10934497-10934516 None:intergenic 20.0%
!! TAATAGTGATTTAAAGATGA+AGG + chr1_1:10934498-10934517 None:intergenic 20.0%
!!! ATATGTTTTGTTAAATAGTG+GGG - chr1_1:10934590-10934609 Msa0007660:intron 20.0%
!!! AACGTGAATGAAATTTTATA+TGG - chr1_1:10934616-10934635 Msa0007660:intron 20.0%
!!! TTATATGGACTAAATTTCAA+TGG - chr1_1:10934631-10934650 Msa0007660:CDS 20.0%
!!! TTCAATGGTTCTTATTTTAT+AGG - chr1_1:10934646-10934665 Msa0007660:CDS 20.0%
!!! TCAATGGTTCTTATTTTATA+GGG - chr1_1:10934647-10934666 Msa0007660:CDS 20.0%
!!! ACTTGTGTAGTTTTATAATA+TGG - chr1_1:10934759-10934778 Msa0007660:CDS 20.0%
!!! CACAATCTCTTATATTTTTT+TGG - chr1_1:10934822-10934841 Msa0007660:CDS 20.0%
!! TATATTATTGTCAATTGTAG+TGG + chr1_1:10935055-10935074 None:intergenic 20.0%
!! CAGAGAAAATACATTATAAA+TGG + chr1_1:10935123-10935142 None:intergenic 20.0%
!! AAAAAATCAATGTACGATAA+GGG + chr1_1:10935447-10935466 None:intergenic 20.0%
!! AAAAAAATCAATGTACGATA+AGG + chr1_1:10935448-10935467 None:intergenic 20.0%
!!! TTAATAATATCTTCTAGGAA+AGG - chr1_1:10935639-10935658 Msa0007660:CDS 20.0%
!!! TTTTAAATGAACAAACTTAC+TGG + chr1_1:10935714-10935733 None:intergenic 20.0%
!!! AATATAAAATGTTGATTGAC+TGG + chr1_1:10936193-10936212 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - chr1_1:10936533-10936552 Msa0007660:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr1_1:10936646-10936665 Msa0007660:intron 20.0%
!!! TTGAAATGGATCAATTATTT+TGG - chr1_1:10936660-10936679 Msa0007660:intron 20.0%
!!! TGAAATGGATCAATTATTTT+GGG - chr1_1:10936661-10936680 Msa0007660:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr1_1:10936683-10936702 Msa0007660:intron 20.0%
!!! AACTGTTATTAATGCATTTT+TGG + chr1_1:10936848-10936867 None:intergenic 20.0%
!!! ATCAAGATTTTACGTAAAAT+CGG + chr1_1:10937314-10937333 None:intergenic 20.0%
!! AATTACCCATTTATACTTAT+CGG - chr1_1:10937387-10937406 Msa0007660:intron 20.0%
!! GAACTATCAGAATAAAAAAT+GGG + chr1_1:10937481-10937500 None:intergenic 20.0%
!! AGAACTATCAGAATAAAAAA+TGG + chr1_1:10937482-10937501 None:intergenic 20.0%
!!! TGTCATTTAAAAACTTCATT+TGG - chr1_1:10937806-10937825 Msa0007660:intron 20.0%
!! AGTCATTTAAAAACTTCATT+TGG - chr1_1:10937868-10937887 Msa0007660:intron 20.0%
!! AAAAGCAGATTTGTATAAAA+TGG + chr1_1:10937980-10937999 None:intergenic 20.0%
!!! AACTAGCTATATATGTTTTA+TGG - chr1_1:10938032-10938051 Msa0007660:intron 20.0%
!!! TATTATTTTATGTTCTGTGT+TGG - chr1_1:10938289-10938308 Msa0007660:intron 20.0%
!! TACAAATATGTACACTATAT+GGG - chr1_1:10938360-10938379 Msa0007660:intron 20.0%
!! AATACTAGAAAAACTCAATT+GGG + chr1_1:10938440-10938459 None:intergenic 20.0%
!! TAATACTAGAAAAACTCAAT+TGG + chr1_1:10938441-10938460 None:intergenic 20.0%
!!! ATTCAAAGTTCTGTTTTTAA+AGG - chr1_1:10938471-10938490 Msa0007660:intron 20.0%
!!! TATTTTGTTTGCATTAGTAA+AGG - chr1_1:10938735-10938754 Msa0007660:intron 20.0%
!!! AACATTATAATTTTTGTGAC+AGG - chr1_1:10939043-10939062 Msa0007660:CDS 20.0%
!!! TTAAATGCTTTAAATAAGCA+TGG - chr1_1:10939848-10939867 Msa0007660:intron 20.0%
!! GTGTTATGAAAATTATATAC+AGG - chr1_1:10940625-10940644 Msa0007660:intron 20.0%
!! ATGAAAATTATATACAGGTA+TGG - chr1_1:10940630-10940649 Msa0007660:intron 20.0%
!! TAAATTCAAATTCTTCTTGA+TGG - chr1_1:10941152-10941171 Msa0007660:intron 20.0%
!! TTATCTACATAAGAAATTTG+AGG + chr1_1:10941198-10941217 None:intergenic 20.0%
!! CTTCAATATAAAGGAATTTA+AGG + chr1_1:10942109-10942128 None:intergenic 20.0%
!! AAGTTTCTTCTCTAATAATA+GGG + chr1_1:10942370-10942389 None:intergenic 20.0%
!! TAAGTTTCTTCTCTAATAAT+AGG + chr1_1:10942371-10942390 None:intergenic 20.0%
!!! TATAGACATATTTAGAACAT+AGG - chr1_1:10942746-10942765 Msa0007660:intron 20.0%
!! TAATATGTAAGAGAGAAATT+GGG + chr1_1:10942941-10942960 None:intergenic 20.0%
!! TTAATATGTAAGAGAGAAAT+TGG + chr1_1:10942942-10942961 None:intergenic 20.0%
!!! ACAATATTTTAAACCGAATT+AGG + chr1_1:10943339-10943358 None:intergenic 20.0%
!! CAAAATTCGCTATATTTATA+GGG + chr1_1:10943412-10943431 None:intergenic 20.0%
!! TCAAAATTCGCTATATTTAT+AGG + chr1_1:10943413-10943432 None:intergenic 20.0%
!! CATAATAAACGAACATAATT+TGG + chr1_1:10943570-10943589 None:intergenic 20.0%
!!! TAATCTAGTTTTGTTTCTAA+CGG - chr1_1:10943766-10943785 Msa0007660:intron 20.0%
!!! ATTAATATGGACTCTTTTAA+TGG + chr1_1:10943877-10943896 None:intergenic 20.0%
!! TCAATATGTTAAACCAAATT+AGG + chr1_1:10943928-10943947 None:intergenic 20.0%
!!! AACTTGTAAAGTTGATAAAT+AGG - chr1_1:10944490-10944509 Msa0007660:intron 20.0%
!!! ACTTGTAAAGTTGATAAATA+GGG - chr1_1:10944491-10944510 Msa0007660:intron 20.0%
!!! ACATTAGTCTCAAATTTTAA+CGG + chr1_1:10944644-10944663 None:intergenic 20.0%
!! AAAAATGTTGCTCTTAAAAT+TGG - chr1_1:10944807-10944826 Msa0007660:intron 20.0%
!!! TTTCTTTTTGGTGTAATATT+TGG - chr1_1:10945078-10945097 Msa0007660:intron 20.0%
!!! TTCTTTTTGGTGTAATATTT+GGG - chr1_1:10945079-10945098 Msa0007660:intron 20.0%
!! TATCTTTTCTTTTCTACCAT+AGG + chr1_1:10929738-10929757 None:intergenic 25.0%
! TGGTAGAAAAGAAAAGATAA+TGG - chr1_1:10929739-10929758 Msa0007660:three_prime_UTR 25.0%
!!! AAAAGATAATGGAAACAACT+TGG - chr1_1:10929750-10929769 Msa0007660:three_prime_UTR 25.0%
! AACATGTAGATTCTATAGTA+AGG - chr1_1:10929793-10929812 Msa0007660:three_prime_UTR 25.0%
!!! TTATTAGCTCTAATTGAAAG+TGG + chr1_1:10929962-10929981 None:intergenic 25.0%
! AAATAATAAATAGGACCAGA+GGG + chr1_1:10930221-10930240 None:intergenic 25.0%
! AAAATAATAAATAGGACCAG+AGG + chr1_1:10930222-10930241 None:intergenic 25.0%
! CAATGACAATTTAAAGAGAT+GGG - chr1_1:10930523-10930542 Msa0007660:intron 25.0%
! TTAGGGTGATAAAACAATAT+TGG + chr1_1:10930627-10930646 None:intergenic 25.0%
! TGGATAGTAGTGTAAAAAAA+TGG + chr1_1:10930894-10930913 None:intergenic 25.0%
!! TTCTGTAAGAAAAGATTTTC+TGG + chr1_1:10930914-10930933 None:intergenic 25.0%
! CAGAAATAATTATTATCTGC+GGG - chr1_1:10930929-10930948 Msa0007660:intron 25.0%
!! ACAGTCATAAAAAACGTTTT+AGG - chr1_1:10931134-10931153 Msa0007660:intron 25.0%
! ACATCTAGACATTAAGAAAA+TGG + chr1_1:10931376-10931395 None:intergenic 25.0%
! TATAGTAGGAATTTCATCAT+TGG + chr1_1:10931430-10931449 None:intergenic 25.0%
! AAGAAAGATTGAAAGATCAA+AGG - chr1_1:10931769-10931788 Msa0007660:intron 25.0%
! AGAAAGATTGAAAGATCAAA+GGG - chr1_1:10931770-10931789 Msa0007660:intron 25.0%
! TCTACATTAATGCTTTCTTA+TGG - chr1_1:10931958-10931977 Msa0007660:intron 25.0%
!!! AGAAAATTGGTTTGAATGAA+TGG - chr1_1:10931989-10932008 Msa0007660:intron 25.0%
!!! GAAAATTGGTTTGAATGAAT+GGG - chr1_1:10931990-10932009 Msa0007660:intron 25.0%
! GTCTGATTATATAACTGTAA+TGG - chr1_1:10932084-10932103 Msa0007660:intron 25.0%
!! TGTTAATATGCAAGTTGTTT+TGG - chr1_1:10932154-10932173 Msa0007660:intron 25.0%
!! ATGATCTAACATGGATTTTA+AGG + chr1_1:10932213-10932232 None:intergenic 25.0%
!! TATCCATTTCCCATAATTTT+AGG - chr1_1:10932232-10932251 Msa0007660:intron 25.0%
! TGAACAAAAATTAACACGAA+AGG - chr1_1:10932345-10932364 Msa0007660:intron 25.0%
! AAATCAACATTTGGATATGA+AGG + chr1_1:10932440-10932459 None:intergenic 25.0%
! ATGGATAGTTGTTAAGATAA+GGG - chr1_1:10932610-10932629 Msa0007660:intron 25.0%
!! AAAGACTAGAATTAGTTTAG+TGG + chr1_1:10932859-10932878 None:intergenic 25.0%
!!! CGATTTTTTGAGAGTATATA+AGG + chr1_1:10932888-10932907 None:intergenic 25.0%
! AAAACAACATATAGTGCATA+AGG - chr1_1:10932996-10933015 Msa0007660:CDS 25.0%
! AAAAGAAATTAGAAGAACTG+AGG - chr1_1:10933158-10933177 Msa0007660:intron 25.0%
!!! CCGTTTCATTTATTTTCTTA+TGG - chr1_1:10933194-10933213 Msa0007660:intron 25.0%
! TTAAAAACTCAGCATAATGA+TGG + chr1_1:10933733-10933752 None:intergenic 25.0%
!! ATTAATCTTCCCTATTGATT+GGG + chr1_1:10934005-10934024 None:intergenic 25.0%
! GATTAATCAATACAATCAAG+AGG - chr1_1:10934018-10934037 Msa0007660:intron 25.0%
!!! TGTGTAGTTTTATAATATGG+TGG - chr1_1:10934762-10934781 Msa0007660:CDS 25.0%
!!! TTTTTTTGGAAAATTGGGAT+AGG - chr1_1:10934836-10934855 Msa0007660:CDS 25.0%
! TTTAACAGAATTATGATTGG+TGG + chr1_1:10935251-10935270 None:intergenic 25.0%
! ACCAATCATAATTCTGTTAA+AGG - chr1_1:10935250-10935269 Msa0007660:CDS 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr1_1:10936572-10936591 Msa0007660:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr1_1:10936682-10936701 Msa0007660:intron 25.0%
!! CATTAATAACAGTTTTCATG+TGG - chr1_1:10936854-10936873 Msa0007660:intron 25.0%
!! AGTATTTCAAGTGTGATTTA+AGG - chr1_1:10937156-10937175 Msa0007660:intron 25.0%
! TACATGCATTTAAATTGCAT+AGG + chr1_1:10937196-10937215 None:intergenic 25.0%
!! ATTTTACGTAAAATCGGAAA+GGG + chr1_1:10937308-10937327 None:intergenic 25.0%
! ATTACCCATTTATACTTATC+GGG - chr1_1:10937388-10937407 Msa0007660:intron 25.0%
! CAGAATAAAAAATGGGAAAA+GGG + chr1_1:10937474-10937493 None:intergenic 25.0%
! TCAGAATAAAAAATGGGAAA+AGG + chr1_1:10937475-10937494 None:intergenic 25.0%
!! ACATGAAAGTGTGAATAAAA+GGG + chr1_1:10937553-10937572 None:intergenic 25.0%
!! TACATGAAAGTGTGAATAAA+AGG + chr1_1:10937554-10937573 None:intergenic 25.0%
! CTGTTTAAGGAAATTATTAC+AGG + chr1_1:10937604-10937623 None:intergenic 25.0%
! CTGTAATAATTTCCTTAAAC+AGG - chr1_1:10937602-10937621 Msa0007660:intron 25.0%
!!! TTAAAAACTTCATTTGGTGT+AGG - chr1_1:10937812-10937831 Msa0007660:intron 25.0%
! CACAAATGACAAATAATAGT+TGG + chr1_1:10938008-10938027 None:intergenic 25.0%
!! CAACTATTATTTGTCATTTG+TGG - chr1_1:10938006-10938025 Msa0007660:intron 25.0%
! ATTTCTTACTTCCTAAAAGA+TGG - chr1_1:10938337-10938356 Msa0007660:intron 25.0%
!! ACATATTTGTACCATCTTTT+AGG + chr1_1:10938351-10938370 None:intergenic 25.0%
! GTACAAATATGTACACTATA+TGG - chr1_1:10938359-10938378 Msa0007660:intron 25.0%
!!! AAAGTTCTGTTTTTAAAGGT+TGG - chr1_1:10938475-10938494 Msa0007660:intron 25.0%
!!! AAGTTCTGTTTTTAAAGGTT+GGG - chr1_1:10938476-10938495 Msa0007660:intron 25.0%
!!! ATTTTGAAATATATGACCGA+TGG - chr1_1:10938538-10938557 Msa0007660:intron 25.0%
!!! TTTTCAATGACTCTTGTTTT+TGG - chr1_1:10938918-10938937 Msa0007660:intron 25.0%
!! CTCCAATATTTAAAATTCCA+GGG - chr1_1:10939153-10939172 Msa0007660:intron 25.0%
! GATATATTGATATTCCTTAC+TGG - chr1_1:10939281-10939300 Msa0007660:intron 25.0%
! ATAAAATATGTCATTGATCC+AGG - chr1_1:10939509-10939528 Msa0007660:intron 25.0%
! AAAAGTTATAATCCAAAGAC+AGG - chr1_1:10939545-10939564 Msa0007660:intron 25.0%
!! ATCAATACCAAGACATTTTA+AGG + chr1_1:10939753-10939772 None:intergenic 25.0%
!!! ACTATCATTTTTGACAACAT+AGG + chr1_1:10939920-10939939 None:intergenic 25.0%
! TATGTTGTCAAAAATGATAG+TGG - chr1_1:10939919-10939938 Msa0007660:intron 25.0%
!! CTTTTGAATTTGTGTTTAGT+TGG - chr1_1:10940115-10940134 Msa0007660:intron 25.0%
! GGAAAAGAGAATAATAAGAA+CGG - chr1_1:10940228-10940247 Msa0007660:intron 25.0%
! AAGACTTAATCCCTATTTAT+AGG - chr1_1:10940296-10940315 Msa0007660:intron 25.0%
! AGACTTAATCCCTATTTATA+GGG - chr1_1:10940297-10940316 Msa0007660:intron 25.0%
!!! TTTTGATTTGGTCTTGATTT+AGG + chr1_1:10940338-10940357 None:intergenic 25.0%
! GTAAATCAAATCATGAGATA+CGG - chr1_1:10940448-10940467 Msa0007660:intron 25.0%
! CTCTCATTATTTATATCTTG+AGG - chr1_1:10940986-10941005 Msa0007660:intron 25.0%
! TATCTTGAGGTTATTTAAGA+TGG - chr1_1:10940999-10941018 Msa0007660:intron 25.0%
!! ATCTTGAGGTTATTTAAGAT+GGG - chr1_1:10941000-10941019 Msa0007660:intron 25.0%
! ATTTACAATTCTAAGTACTC+GGG + chr1_1:10941268-10941287 None:intergenic 25.0%
! CATTTACAATTCTAAGTACT+CGG + chr1_1:10941269-10941288 None:intergenic 25.0%
! TAGCAAAAAAACAAAAACAG+AGG + chr1_1:10941360-10941379 None:intergenic 25.0%
! CTTTAGTTAAAGTGAAACTT+GGG + chr1_1:10941511-10941530 None:intergenic 25.0%
! TCTTTAGTTAAAGTGAAACT+TGG + chr1_1:10941512-10941531 None:intergenic 25.0%
!! TTTTATGGGGTTAATATTTG+TGG - chr1_1:10941589-10941608 Msa0007660:intron 25.0%
! TTGAATCAGCATTATGAAAA+AGG + chr1_1:10941798-10941817 None:intergenic 25.0%
!!! GTTGTGTTAGTTCTATTTTT+GGG + chr1_1:10942007-10942026 None:intergenic 25.0%
!!! AGTTGTGTTAGTTCTATTTT+TGG + chr1_1:10942008-10942027 None:intergenic 25.0%
! TTATCTTACAAACTGGATTT+AGG + chr1_1:10942063-10942082 None:intergenic 25.0%
! TAAATCCAGTTTGTAAGATA+AGG - chr1_1:10942062-10942081 Msa0007660:intron 25.0%
! AAATCCAGTTTGTAAGATAA+GGG - chr1_1:10942063-10942082 Msa0007660:intron 25.0%
! CAATTGCAACTTCAATATAA+AGG + chr1_1:10942118-10942137 None:intergenic 25.0%
! TTGAAATGAGATGAAGAAAA+TGG + chr1_1:10942246-10942265 None:intergenic 25.0%
! AGTTTCTTCTCTAATAATAG+GGG + chr1_1:10942369-10942388 None:intergenic 25.0%
! ACTTAGAACTAGTTAGTTAA+GGG - chr1_1:10942407-10942426 Msa0007660:intron 25.0%
! TTCAATATAGATAACCCAAA+TGG - chr1_1:10942676-10942695 Msa0007660:intron 25.0%
! CATCACAATTTAGTTGAAAA+GGG - chr1_1:10942798-10942817 Msa0007660:intron 25.0%
! TATATTCTTATTGCAGATCA+CGG - chr1_1:10943126-10943145 Msa0007660:intron 25.0%
!! AAATATTGTGATCCTTTTGT+AGG - chr1_1:10943350-10943369 Msa0007660:intron 25.0%
!! AATATTGTGATCCTTTTGTA+GGG - chr1_1:10943351-10943370 Msa0007660:intron 25.0%
! ATTAATTCATTCCCTACAAA+AGG + chr1_1:10943365-10943384 None:intergenic 25.0%
! TAGGGAATGAATTAATCTTT+GGG - chr1_1:10943369-10943388 Msa0007660:CDS 25.0%
! TGAATATAAAGTGGTCATTA+AGG + chr1_1:10943505-10943524 None:intergenic 25.0%
! ACATTCACATGAATATAAAG+TGG + chr1_1:10943514-10943533 None:intergenic 25.0%
!!! GTTTTATTTTTGGTCTCTAA+TGG + chr1_1:10943642-10943661 None:intergenic 25.0%
! ACAATGACTGTACATTAATA+TGG + chr1_1:10943890-10943909 None:intergenic 25.0%
! ATATTAATGTACAGTCATTG+TGG - chr1_1:10943889-10943908 Msa0007660:CDS 25.0%
!! ATGCTTTTAGATTCCTAATT+TGG - chr1_1:10943912-10943931 Msa0007660:CDS 25.0%
!! ACATATTGACATCCTTTTAT+AGG - chr1_1:10943939-10943958 Msa0007660:CDS 25.0%
!!! AATGGTAGTTTTGTTTCTAA+TGG - chr1_1:10943978-10943997 Msa0007660:CDS 25.0%
! TACAAAATTCTTCATTTGCA+GGG + chr1_1:10944102-10944121 None:intergenic 25.0%
! TTACAAAATTCTTCATTTGC+AGG + chr1_1:10944103-10944122 None:intergenic 25.0%
! TACTTTGGGCTTATAAATTA+GGG + chr1_1:10944127-10944146 None:intergenic 25.0%
! TGTGTGTAATTATCTACTTT+GGG + chr1_1:10944141-10944160 None:intergenic 25.0%
! GAAATCAATTTAGATTGTTG+TGG - chr1_1:10944308-10944327 Msa0007660:intron 25.0%
! AATTTAGATTGTTGTGGAAT+TGG - chr1_1:10944314-10944333 Msa0007660:intron 25.0%
! AAACTTTGATACTAATGTCT+TGG + chr1_1:10944451-10944470 None:intergenic 25.0%
! AAGTTAGTTGAAGTTATACA+GGG + chr1_1:10944475-10944494 None:intergenic 25.0%
!!! TAAAGTTGATAAATAGGGAA+AGG - chr1_1:10944496-10944515 Msa0007660:intron 25.0%
!!! AAAGTTGATAAATAGGGAAA+GGG - chr1_1:10944497-10944516 Msa0007660:intron 25.0%
!!! ATTGACAGTTTTAAATTTGC+TGG - chr1_1:10944586-10944605 Msa0007660:intron 25.0%
! TTAGTGCTTTGTATTATTGA+TGG - chr1_1:10944892-10944911 Msa0007660:intron 25.0%
! TAGTGCTTTGTATTATTGAT+GGG - chr1_1:10944893-10944912 Msa0007660:intron 25.0%
!!! GTATTATTGATGGGTTTTTT+AGG - chr1_1:10944902-10944921 Msa0007660:intron 25.0%
! TGCCATTCAAAAAAAAGAAT+TGG - chr1_1:10945132-10945151 Msa0007660:intron 25.0%
!!! CACCAATTCTTTTTTTTGAA+TGG + chr1_1:10945137-10945156 None:intergenic 25.0%
! CATTCAAAAAAAAGAATTGG+TGG - chr1_1:10945135-10945154 Msa0007660:intron 25.0%
TAGATTCTATAGTAAGGAGA+TGG - chr1_1:10929799-10929818 Msa0007660:intron 30.0%
! TAATTAGTTTAGGTCTTCCT+CGG + chr1_1:10929857-10929876 None:intergenic 30.0%
! ATACGTAGTAGTGTTTTTCT+TGG - chr1_1:10929986-10930005 Msa0007660:CDS 30.0%
CCTTAAAAACACACATAAAC+TGG + chr1_1:10930050-10930069 None:intergenic 30.0%
!! CCAGTTTATGTGTGTTTTTA+AGG - chr1_1:10930047-10930066 Msa0007660:intron 30.0%
CAAAAATAAAATACTCCCTC+TGG - chr1_1:10930203-10930222 Msa0007660:intron 30.0%
!!! CATTTTTTAACATGATGGTC+TGG - chr1_1:10930439-10930458 Msa0007660:intron 30.0%
TTTATTCCTTGCAGTGAAAA+TGG - chr1_1:10930496-10930515 Msa0007660:intron 30.0%
GCAATGACAATTTAAAGAGA+TGG - chr1_1:10930522-10930541 Msa0007660:intron 30.0%
ATGATGTACTGTACAATTGT+GGG + chr1_1:10930587-10930606 None:intergenic 30.0%
AATGATGTACTGTACAATTG+TGG + chr1_1:10930588-10930607 None:intergenic 30.0%
ACAATTGTACAGTACATCAT+TGG - chr1_1:10930587-10930606 Msa0007660:intron 30.0%
!! TCATTTTGGAAACGTTGTTT+TGG - chr1_1:10930663-10930682 Msa0007660:intron 30.0%
!! CATTTTGGAAACGTTGTTTT+GGG - chr1_1:10930664-10930683 Msa0007660:intron 30.0%
GATAATGACCATATTGTTAG+TGG - chr1_1:10931064-10931083 Msa0007660:intron 30.0%
TATCATCACCACTAACAATA+TGG + chr1_1:10931075-10931094 None:intergenic 30.0%
!!! AAACGTTTTTTATGACTGTC+TGG + chr1_1:10931133-10931152 None:intergenic 30.0%
ATCAAACAAGTGGATATAGT+AGG + chr1_1:10931444-10931463 None:intergenic 30.0%
GCAAAGAAAGAAACAAACAA+AGG + chr1_1:10931647-10931666 None:intergenic 30.0%
TAGACAAGTAATCACATCAA+GGG + chr1_1:10931731-10931750 None:intergenic 30.0%
ATAGACAAGTAATCACATCA+AGG + chr1_1:10931732-10931751 None:intergenic 30.0%
ATTGAAAGATCAAAGGGAAA+AGG - chr1_1:10931776-10931795 Msa0007660:intron 30.0%
CATTAGTAGTCGGATTTATT+TGG - chr1_1:10931854-10931873 Msa0007660:intron 30.0%
ATTTGGTCAATTGTACTTGA+AGG - chr1_1:10931871-10931890 Msa0007660:intron 30.0%
CACTGGAAGAAACATTTAAT+GGG + chr1_1:10932136-10932155 None:intergenic 30.0%
ACACTGGAAGAAACATTTAA+TGG + chr1_1:10932137-10932156 None:intergenic 30.0%
AACAACTTGCATATTAACAC+TGG + chr1_1:10932153-10932172 None:intergenic 30.0%
GAAATGGATATGATCTAACA+TGG + chr1_1:10932222-10932241 None:intergenic 30.0%
GTTCCTAAAATTATGGGAAA+TGG + chr1_1:10932238-10932257 None:intergenic 30.0%
AAATTAACACGAAAGGAAGA+AGG - chr1_1:10932352-10932371 Msa0007660:intron 30.0%
CTTAACAACTATCCATCAAA+AGG + chr1_1:10932606-10932625 None:intergenic 30.0%
GATGGATAGTTGTTAAGATA+AGG - chr1_1:10932609-10932628 Msa0007660:intron 30.0%
! TAGAATTAGTTTAGTGGTGA+GGG + chr1_1:10932853-10932872 None:intergenic 30.0%
ATACTCTCAAAAAATCGTCT+AGG - chr1_1:10932891-10932910 Msa0007660:intron 30.0%
! AGATGGAGTTGTTGAAATTT+TGG - chr1_1:10932935-10932954 Msa0007660:intron 30.0%
AGAATACTTGAAGAAAAGAG+AGG - chr1_1:10933135-10933154 Msa0007660:intron 30.0%
GATGAGCAATATCTATTTGA+AGG - chr1_1:10933367-10933386 Msa0007660:intron 30.0%
!!! GCTTGACACTACTTTTTATA+GGG + chr1_1:10933507-10933526 None:intergenic 30.0%
AAGCATTTCCTTTACAGAAT+TGG + chr1_1:10933529-10933548 None:intergenic 30.0%
! TTTGTTAAGAGGCATAATGA+TGG + chr1_1:10933633-10933652 None:intergenic 30.0%
! TTTCAAACCTGTTTGTTAAG+AGG + chr1_1:10933644-10933663 None:intergenic 30.0%
ATCTAGTTAAATAGACAGAC+AGG - chr1_1:10933663-10933682 Msa0007660:intron 30.0%
GGCAGAATGTACATTTATAT+AGG - chr1_1:10933959-10933978 Msa0007660:intron 30.0%
GAATGTACATTTATATAGGC+AGG - chr1_1:10933963-10933982 Msa0007660:intron 30.0%
TAGTTAATCCCCAATCAATA+GGG - chr1_1:10933993-10934012 Msa0007660:intron 30.0%
! TTAATCTTCCCTATTGATTG+GGG + chr1_1:10934004-10934023 None:intergenic 30.0%
GATTAATCTTCCCTATTGAT+TGG + chr1_1:10934006-10934025 None:intergenic 30.0%
! CTTTTCTCTTTTTCTAGACA+AGG + chr1_1:10934174-10934193 None:intergenic 30.0%
AGAGAAAAGAAACATCTGTA+AGG - chr1_1:10934185-10934204 Msa0007660:intron 30.0%
!! AAAACAACTTGTTGTATCTC+TGG - chr1_1:10934280-10934299 Msa0007660:intron 30.0%
TGTTAGGGTTAAATATGTTG+CGG - chr1_1:10934455-10934474 Msa0007660:intron 30.0%
AAAGAAAAGGAAAAGGGAAT+CGG - chr1_1:10935076-10935095 Msa0007660:CDS 30.0%
TTATCCCATGAATTTCCAAA+AGG - chr1_1:10935147-10935166 Msa0007660:CDS 30.0%
!! AGTACCTTTTGGAAATTCAT+GGG + chr1_1:10935154-10935173 None:intergenic 30.0%
!! AAGTACCTTTTGGAAATTCA+TGG + chr1_1:10935155-10935174 None:intergenic 30.0%
! TAATAAAGGCAAGTACCTTT+TGG + chr1_1:10935165-10935184 None:intergenic 30.0%
!! AAAAGGTACTTGCCTTTATT+AGG - chr1_1:10935164-10935183 Msa0007660:CDS 30.0%
TGCTATCTTGTATTAAGAGT+TGG - chr1_1:10935202-10935221 Msa0007660:CDS 30.0%
GCTATCTTGTATTAAGAGTT+GGG - chr1_1:10935203-10935222 Msa0007660:CDS 30.0%
GCCTTTAACAGAATTATGAT+TGG + chr1_1:10935254-10935273 None:intergenic 30.0%
!! TACGATAAGGGTATTAGAAA+GGG + chr1_1:10935435-10935454 None:intergenic 30.0%
!! AGAACAGGGATTTATTTTCT+CGG + chr1_1:10935591-10935610 None:intergenic 30.0%
GAAAACAAACGAAAAGAACA+GGG + chr1_1:10935605-10935624 None:intergenic 30.0%
TGAAAACAAACGAAAAGAAC+AGG + chr1_1:10935606-10935625 None:intergenic 30.0%
!!! AGAGGCTTGCTTTTTATTTT+TGG + chr1_1:10935683-10935702 None:intergenic 30.0%
CGCAATGTTATATTGTAATC+TGG - chr1_1:10935744-10935763 Msa0007660:intron 30.0%
! TCAGTGTGCTTTTATTCTTT+AGG - chr1_1:10935805-10935824 Msa0007660:intron 30.0%
ATGCCTTGATAAAATCGATT+TGG + chr1_1:10935932-10935951 None:intergenic 30.0%
!! AATCGATTTTATCAAGGCAT+CGG - chr1_1:10935932-10935951 Msa0007660:intron 30.0%
!!! TTTAGTTTTAGTAGCTCTAC+AGG - chr1_1:10936157-10936176 Msa0007660:CDS 30.0%
!! ATCAGTTTTCAGTTACTTTG+TGG - chr1_1:10936344-10936363 Msa0007660:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr1_1:10936540-10936559 Msa0007660:intron 30.0%
AAGTGGAATATATTGGAAAG+TGG - chr1_1:10936557-10936576 Msa0007660:intron 30.0%
GAGTAGCAAAGATAATCAAA+GGG - chr1_1:10936727-10936746 Msa0007660:intron 30.0%
AGTAGCAAAGATAATCAAAG+GGG - chr1_1:10936728-10936747 Msa0007660:intron 30.0%
TTGACCCGTATTAATATACT+AGG - chr1_1:10936769-10936788 Msa0007660:intron 30.0%
TGACCCGTATTAATATACTA+GGG - chr1_1:10936770-10936789 Msa0007660:intron 30.0%
TCTCCCCTAGTATATTAATA+CGG + chr1_1:10936777-10936796 None:intergenic 30.0%
!! TGCATTTTTGGATATCTCAA+AGG + chr1_1:10936836-10936855 None:intergenic 30.0%
! TAACAGTTTTCATGTGGTAT+AGG - chr1_1:10936860-10936879 Msa0007660:intron 30.0%
AGAATCGTTTCAAAGAAAAG+TGG + chr1_1:10936918-10936937 None:intergenic 30.0%
TTGAAACGATTCTACGATTA+TGG - chr1_1:10936925-10936944 Msa0007660:intron 30.0%
! GATTTTACGTAAAATCGGAA+AGG + chr1_1:10937309-10937328 None:intergenic 30.0%
AAGTGTGAATAAAAGGGTAA+TGG + chr1_1:10937547-10937566 None:intergenic 30.0%
CAATTACAAGTACCTGTTTA+AGG + chr1_1:10937617-10937636 None:intergenic 30.0%
AAACAGGTACTTGTAATTGT+TGG - chr1_1:10937618-10937637 Msa0007660:intron 30.0%
CATAATAACTTCAGAAGATG+GGG + chr1_1:10938106-10938125 None:intergenic 30.0%
GCATAATAACTTCAGAAGAT+GGG + chr1_1:10938107-10938126 None:intergenic 30.0%
!! GTTCTGTGTTGGTTATAATA+TGG - chr1_1:10938300-10938319 Msa0007660:intron 30.0%
AAAACTCAATTGGGAAAAAG+AGG + chr1_1:10938431-10938450 None:intergenic 30.0%
ATGTTACTGAGAGAATTTCT+TGG - chr1_1:10938562-10938581 Msa0007660:intron 30.0%
CTAATATTGTAGTGTTGTGA+TGG - chr1_1:10938678-10938697 Msa0007660:intron 30.0%
TCAACTCACTTGGATTATAA+AGG + chr1_1:10938788-10938807 None:intergenic 30.0%
! TATAATCCAAGTGAGTTGAA+TGG - chr1_1:10938789-10938808 Msa0007660:CDS 30.0%
! ATCAAGATACTGATTGTTCA+AGG + chr1_1:10938836-10938855 None:intergenic 30.0%
! TGTATTTAAAGCATGTGCTT+AGG - chr1_1:10938987-10939006 Msa0007660:intron 30.0%
! GCTCCAATATTTAAAATTCC+AGG - chr1_1:10939152-10939171 Msa0007660:intron 30.0%
! CTCCCTGGAATTTTAAATAT+TGG + chr1_1:10939158-10939177 None:intergenic 30.0%
! TATTTAAAATTCCAGGGAGA+AGG - chr1_1:10939159-10939178 Msa0007660:intron 30.0%
AGGAATATCAATATATCTCC+AGG + chr1_1:10939278-10939297 None:intergenic 30.0%
TGGTCAAGAAGAAATTGAAA+CGG - chr1_1:10939301-10939320 Msa0007660:intron 30.0%
!!! ATTTTAGCTTGTAGTTCAGT+TGG + chr1_1:10939410-10939429 None:intergenic 30.0%
! CAATGATGTTTCTGCAATAT+TGG + chr1_1:10939477-10939496 None:intergenic 30.0%
GAAACATCATTGACAATTGA+TGG - chr1_1:10939485-10939504 Msa0007660:intron 30.0%
TTATAATCCAAAGACAGGAA+TGG - chr1_1:10939550-10939569 Msa0007660:intron 30.0%
AATTGTATGCAGTATACAAC+CGG + chr1_1:10939661-10939680 None:intergenic 30.0%
!! GTTTTGACCTTAAAATGTCT+TGG - chr1_1:10939743-10939762 Msa0007660:CDS 30.0%
CTTGTTGCACTTTGAATTTA+TGG - chr1_1:10939775-10939794 Msa0007660:intron 30.0%
!! AATTTTCACTCTGGAAATGT+TGG - chr1_1:10940061-10940080 Msa0007660:intron 30.0%
! TTTTCCAGGTTTACAATTCT+TGG - chr1_1:10940576-10940595 Msa0007660:intron 30.0%
AGACCAATTATTCAACACAA+TGG - chr1_1:10940603-10940622 Msa0007660:intron 30.0%
ACACCATTGTGTTGAATAAT+TGG + chr1_1:10940609-10940628 None:intergenic 30.0%
GACTTCACTTATTAACGTAA+AGG + chr1_1:10940678-10940697 None:intergenic 30.0%
TACGTTAATAAGTGAAGTCA+TGG - chr1_1:10940679-10940698 Msa0007660:intron 30.0%
TGAAGTCATGGAAATAATAG+TGG - chr1_1:10940691-10940710 Msa0007660:intron 30.0%
! AATAATAGTGGAGGAAATCA+AGG - chr1_1:10940703-10940722 Msa0007660:intron 30.0%
ACAGTCAATAAGGATAATAG+GGG + chr1_1:10940887-10940906 None:intergenic 30.0%
CACAGTCAATAAGGATAATA+GGG + chr1_1:10940888-10940907 None:intergenic 30.0%
!!! AGTGGTTATTTTTTTGTGCT+TGG - chr1_1:10940932-10940951 Msa0007660:intron 30.0%
! TACATAAGAAATTTGAGGCA+GGG + chr1_1:10941193-10941212 None:intergenic 30.0%
CGAGTACTTAGAATTGTAAA+TGG - chr1_1:10941267-10941286 Msa0007660:intron 30.0%
ATGAAATAAGAAACCCACTT+GGG + chr1_1:10941477-10941496 None:intergenic 30.0%
! TGGGTTTCTTATTTCATGTT+GGG - chr1_1:10941480-10941499 Msa0007660:intron 30.0%
TATTAACCCCATAAAATCGA+GGG + chr1_1:10941585-10941604 None:intergenic 30.0%
ATATTAACCCCATAAAATCG+AGG + chr1_1:10941586-10941605 None:intergenic 30.0%
!!! GTGGTGTTATTTTGATGTTT+AGG - chr1_1:10941608-10941627 Msa0007660:intron 30.0%
! TTAGGTAAGAAGTATGAAAC+AGG - chr1_1:10941626-10941645 Msa0007660:intron 30.0%
AGATGCTATAGATTTCTTGA+TGG + chr1_1:10941733-10941752 None:intergenic 30.0%
ATCAAGAAATCTATAGCATC+TGG - chr1_1:10941732-10941751 Msa0007660:intron 30.0%
!!! TTCAATTTTTTAACGACTGC+AGG - chr1_1:10941813-10941832 Msa0007660:intron 30.0%
ACTGCAAAATTGCACAAAAA+CGG - chr1_1:10941849-10941868 Msa0007660:intron 30.0%
!! TTTTGAGTATCTTAGATCTC+AGG - chr1_1:10941965-10941984 Msa0007660:intron 30.0%
TTTAATACACCCTCTTTCAT+TGG - chr1_1:10942303-10942322 Msa0007660:intron 30.0%
GACTTAGAACTAGTTAGTTA+AGG - chr1_1:10942406-10942425 Msa0007660:intron 30.0%
AGTATCATTCTTCTCCATTT+GGG + chr1_1:10942693-10942712 None:intergenic 30.0%
AAGTATCATTCTTCTCCATT+TGG + chr1_1:10942694-10942713 None:intergenic 30.0%
TGAAGAACTGATACGAAAAA+CGG - chr1_1:10942713-10942732 Msa0007660:intron 30.0%
! CCTTTTCAACTAAATTGTGA+TGG + chr1_1:10942800-10942819 None:intergenic 30.0%
CCATCACAATTTAGTTGAAA+AGG - chr1_1:10942797-10942816 Msa0007660:intron 30.0%
CAATTTAGTTGAAAAGGGTT+TGG - chr1_1:10942803-10942822 Msa0007660:intron 30.0%
!!! GAATTTTTTCAATGGATGCT+CGG - chr1_1:10943084-10943103 Msa0007660:intron 30.0%
!!! AATTTTTTCAATGGATGCTC+GGG - chr1_1:10943085-10943104 Msa0007660:intron 30.0%
ATACTGTCTTCAAGATCATT+GGG + chr1_1:10943199-10943218 None:intergenic 30.0%
AAACCAAATTAGGAACCTAA+GGG + chr1_1:10943282-10943301 None:intergenic 30.0%
AAAACCAAATTAGGAACCTA+AGG + chr1_1:10943283-10943302 None:intergenic 30.0%
GTAGGGAATGAATTAATCTT+TGG - chr1_1:10943368-10943387 Msa0007660:CDS 30.0%
ATAAATGAGGTGTACATTTG+AGG - chr1_1:10943850-10943869 Msa0007660:intron 30.0%
TAAATGAGGTGTACATTTGA+GGG - chr1_1:10943851-10943870 Msa0007660:intron 30.0%
TAGAAACAAAACTACCATTG+TGG + chr1_1:10943977-10943996 None:intergenic 30.0%
TTGTACTACTAACTCAGTTT+AGG - chr1_1:10944046-10944065 Msa0007660:intron 30.0%
TGTACTACTAACTCAGTTTA+GGG - chr1_1:10944047-10944066 Msa0007660:intron 30.0%
CTACTTTGGGCTTATAAATT+AGG + chr1_1:10944128-10944147 None:intergenic 30.0%
GTGTGTGTAATTATCTACTT+TGG + chr1_1:10944142-10944161 None:intergenic 30.0%
ATGAATATTCTGGTAAGGAT+AGG + chr1_1:10944175-10944194 None:intergenic 30.0%
ATTGTTGTGGAATTGGAAAA+AGG - chr1_1:10944321-10944340 Msa0007660:intron 30.0%
TGTTTAACAGAATGGATATG+TGG - chr1_1:10944353-10944372 Msa0007660:intron 30.0%
! AAGATTGGTTAGAACAATTC+AGG - chr1_1:10944382-10944401 Msa0007660:intron 30.0%
CAAGTTAGTTGAAGTTATAC+AGG + chr1_1:10944476-10944495 None:intergenic 30.0%
CAACAACTCAAATAGATGAA+GGG + chr1_1:10944680-10944699 None:intergenic 30.0%
TCAACAACTCAAATAGATGA+AGG + chr1_1:10944681-10944700 None:intergenic 30.0%
TTGAAGGAACAAATCATTGT+CGG - chr1_1:10944973-10944992 Msa0007660:intron 30.0%
GACGGTTTATGATTTCTTTG+CGG + chr1_1:10929490-10929509 None:intergenic 35.0%
CAACAAACTATAACTCTCTC+TGG + chr1_1:10929589-10929608 None:intergenic 35.0%
! TGAAAAGAAGCGTATGTCTA+GGG + chr1_1:10929687-10929706 None:intergenic 35.0%
! ATTTGGGTTACTAACACCTA+TGG - chr1_1:10929719-10929738 Msa0007660:three_prime_UTR 35.0%
TAATGGAAACAACTTGGCTT+AGG - chr1_1:10929756-10929775 Msa0007660:three_prime_UTR 35.0%
!! TAGCTCTAATTGAAAGTGGT+CGG + chr1_1:10929958-10929977 None:intergenic 35.0%
GTATGACCTTTGTGAATGAT+TGG - chr1_1:10930094-10930113 Msa0007660:intron 35.0%
TCATGACCAATCATTCACAA+AGG + chr1_1:10930103-10930122 None:intergenic 35.0%
!!! AAAGTTTTAGTTAATCGGGC+CGG - chr1_1:10930255-10930274 Msa0007660:intron 35.0%
TAAAAATTTGTGTCCAAGCC+CGG + chr1_1:10930308-10930327 None:intergenic 35.0%
! CTGCTGATTGAGTTCTATTT+AGG - chr1_1:10930408-10930427 Msa0007660:intron 35.0%
AAATTTCTTCCACAAACGCA+CGG + chr1_1:10930802-10930821 None:intergenic 35.0%
GCAGTATATTCATTGTGTCT+TGG + chr1_1:10930872-10930891 None:intergenic 35.0%
TCAAGATGATCAAGAAGATG+AGG - chr1_1:10931171-10931190 Msa0007660:intron 35.0%
AGGTAAGTTCAAGGAAAGAA+AGG - chr1_1:10931296-10931315 Msa0007660:intron 35.0%
GGTAAGTTCAAGGAAAGAAA+GGG - chr1_1:10931297-10931316 Msa0007660:intron 35.0%
ATTACCCTTGATGAAGATAG+TGG - chr1_1:10931340-10931359 Msa0007660:intron 35.0%
TGAACCACTATCTTCATCAA+GGG + chr1_1:10931347-10931366 None:intergenic 35.0%
GAAACAAACAAAGGACTCTT+TGG + chr1_1:10931638-10931657 None:intergenic 35.0%
AATGAATGGGTGAAAATGTG+TGG - chr1_1:10932003-10932022 Msa0007660:intron 35.0%
! GGAAGAAACATTTAATGGGT+GGG + chr1_1:10932132-10932151 None:intergenic 35.0%
TGGAAGAAACATTTAATGGG+TGG + chr1_1:10932133-10932152 None:intergenic 35.0%
!!! ATGCAAGTTGTTTTGGCTTA+AGG - chr1_1:10932161-10932180 Msa0007660:intron 35.0%
!! ATGATGATATGTGCTGTTTG+AGG - chr1_1:10932524-10932543 Msa0007660:intron 35.0%
!!! GTTTGAGGTTTGCTATTTTG+TGG - chr1_1:10932539-10932558 Msa0007660:intron 35.0%
! CACAAAATTCTGCCTTTTGA+TGG - chr1_1:10932591-10932610 Msa0007660:intron 35.0%
! AGAATTAGTTTAGTGGTGAG+GGG + chr1_1:10932852-10932871 None:intergenic 35.0%
! CTAGAATTAGTTTAGTGGTG+AGG + chr1_1:10932854-10932873 None:intergenic 35.0%
! TCAAAAAATCGTCTAGGACA+TGG - chr1_1:10932897-10932916 Msa0007660:intron 35.0%
GGTTTGGAAAAGACTTAAGA+TGG - chr1_1:10932918-10932937 Msa0007660:intron 35.0%
! TGGTTTTTGATATTACCCGT+CGG - chr1_1:10932955-10932974 Msa0007660:intron 35.0%
! TTAAGATACGCTTTTGATCG+CGG - chr1_1:10933049-10933068 Msa0007660:CDS 35.0%
! CATTGACTGAAAATCAGAAC+TGG + chr1_1:10933226-10933245 None:intergenic 35.0%
!!! GGCTTGACACTACTTTTTAT+AGG + chr1_1:10933508-10933527 None:intergenic 35.0%
TTATTCTAACTCCATTACCG+AGG + chr1_1:10933559-10933578 None:intergenic 35.0%
CATTATGCCTCTTAACAAAC+AGG - chr1_1:10933634-10933653 Msa0007660:intron 35.0%
! AACTCAGCATAATGATGGAA+GGG + chr1_1:10933728-10933747 None:intergenic 35.0%
! AAACTCAGCATAATGATGGA+AGG + chr1_1:10933729-10933748 None:intergenic 35.0%
!! AAAGTTTTCTATTTCTCCCC+AGG - chr1_1:10933816-10933835 Msa0007660:intron 35.0%
! CTATTGATTGGGGATTAACT+AGG + chr1_1:10933994-10934013 None:intergenic 35.0%
CTAGTTAATCCCCAATCAAT+AGG - chr1_1:10933992-10934011 Msa0007660:intron 35.0%
CAATAGCTCAGCATATTTCA+TGG - chr1_1:10934070-10934089 Msa0007660:intron 35.0%
TGTATCTCTGGATTGAGATT+AGG - chr1_1:10934292-10934311 Msa0007660:intron 35.0%
TGAATAACGAGTGTTAGATC+AGG + chr1_1:10934410-10934429 None:intergenic 35.0%
ATTTGCCAGTTGTTCTTGTT+AGG - chr1_1:10934439-10934458 Msa0007660:intron 35.0%
TTTGCCAGTTGTTCTTGTTA+GGG - chr1_1:10934440-10934459 Msa0007660:intron 35.0%
TTAACCCTAACAAGAACAAC+TGG + chr1_1:10934447-10934466 None:intergenic 35.0%
GTTAGGGTTAAATATGTTGC+GGG - chr1_1:10934456-10934475 Msa0007660:intron 35.0%
AAAACTACACAAGTCAGTCA+AGG + chr1_1:10934753-10934772 None:intergenic 35.0%
GTGGTTCTTCTCATTTGTAA+TGG - chr1_1:10934781-10934800 Msa0007660:CDS 35.0%
AATGCCAGACACTTATGATA+AGG - chr1_1:10934955-10934974 Msa0007660:CDS 35.0%
! TCAAGAAAAGAGGTTTTCTG+TGG - chr1_1:10934991-10935010 Msa0007660:CDS 35.0%
TTGTATTAAGAGTTGGGCTT+TGG - chr1_1:10935209-10935228 Msa0007660:CDS 35.0%
AACAGAATTATGATTGGTGG+AGG + chr1_1:10935248-10935267 None:intergenic 35.0%
!! GTACGATAAGGGTATTAGAA+AGG + chr1_1:10935436-10935455 None:intergenic 35.0%
! GAATCCATTTTCTGAACAAG+AGG - chr1_1:10935501-10935520 Msa0007660:CDS 35.0%
!! ATTTTCTGAACAAGAGGCAT+GGG - chr1_1:10935507-10935526 Msa0007660:CDS 35.0%
CTCGGAAAGTAGATATTACA+AGG + chr1_1:10935573-10935592 None:intergenic 35.0%
AACTTACTGGTAATCATCAG+AGG + chr1_1:10935701-10935720 None:intergenic 35.0%
!! CTGGTTCTGTTGTTACTTAT+CGG - chr1_1:10935763-10935782 Msa0007660:intron 35.0%
! TTCTTTAGGTGTAGCATTGA+AGG - chr1_1:10935819-10935838 Msa0007660:intron 35.0%
! TCTTTTAGTGCACACATTAC+TGG - chr1_1:10935860-10935879 Msa0007660:intron 35.0%
!! GGACCAAATCGATTTTATCA+AGG - chr1_1:10935926-10935945 Msa0007660:intron 35.0%
ACTTGACTCATGACGTTTAA+TGG - chr1_1:10935988-10936007 Msa0007660:CDS 35.0%
ATTAAACTGCAAAGCAAGTC+TGG + chr1_1:10936033-10936052 None:intergenic 35.0%
GCAGTTTAATTACGATGAGA+TGG - chr1_1:10936043-10936062 Msa0007660:intron 35.0%
TGAAAAGTCCAAAGCAAAGT+CGG - chr1_1:10936076-10936095 Msa0007660:intron 35.0%
! AAAATGTTGATTGACTGGCA+AGG + chr1_1:10936188-10936207 None:intergenic 35.0%
! ATGTATATTAAGGAGTGCAG+TGG - chr1_1:10936389-10936408 Msa0007660:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG + chr1_1:10936496-10936515 None:intergenic 35.0%
CCAAAGTAGGTCAATTATAC+CGG + chr1_1:10936497-10936516 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + chr1_1:10936510-10936529 None:intergenic 35.0%
AAGGGGAAAGTGGAATATAT+TGG - chr1_1:10936550-10936569 Msa0007660:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr1_1:10936696-10936715 Msa0007660:intron 35.0%
GGAGTAGCAAAGATAATCAA+AGG - chr1_1:10936726-10936745 Msa0007660:intron 35.0%
GACCCGTATTAATATACTAG+GGG - chr1_1:10936771-10936790 Msa0007660:intron 35.0%
CTCCCCTAGTATATTAATAC+GGG + chr1_1:10936776-10936795 None:intergenic 35.0%
!! AAGAAGGGTGCCAAAAAAAA+CGG - chr1_1:10936800-10936819 Msa0007660:intron 35.0%
! AAGTCGGAAAAGTATATGCA+AGG + chr1_1:10937345-10937364 None:intergenic 35.0%
TCCTCCCGATAAGTATAAAT+GGG + chr1_1:10937395-10937414 None:intergenic 35.0%
TTCCTCCCGATAAGTATAAA+TGG + chr1_1:10937396-10937415 None:intergenic 35.0%
! ATTCTGATAGTTCTGTCTTC+TGG - chr1_1:10937488-10937507 Msa0007660:intron 35.0%
! CTTGTAATTGTTGGTGAAAC+CGG - chr1_1:10937627-10937646 Msa0007660:intron 35.0%
GGCATAATAACTTCAGAAGA+TGG + chr1_1:10938108-10938127 None:intergenic 35.0%
ATTATGCCTTTCCTATGCAT+TGG - chr1_1:10938120-10938139 Msa0007660:intron 35.0%
TTCTTTCCAATGCATAGGAA+AGG + chr1_1:10938129-10938148 None:intergenic 35.0%
TTTCCTATGCATTGGAAAGA+AGG - chr1_1:10938128-10938147 Msa0007660:intron 35.0%
AAACCTTCTTTCCAATGCAT+AGG + chr1_1:10938134-10938153 None:intergenic 35.0%
CACGAATTAGGTGTTAAACT+AGG - chr1_1:10938234-10938253 Msa0007660:intron 35.0%
TTCTCTCAGTAACATTCCAT+CGG + chr1_1:10938557-10938576 None:intergenic 35.0%
! TTGGATTAGGATTCTGGATT+AGG - chr1_1:10938620-10938639 Msa0007660:CDS 35.0%
! ATTAGGATTCTGGATTAGGT+TGG - chr1_1:10938624-10938643 Msa0007660:CDS 35.0%
ATATTGTAGTGTTGTGATGG+TGG - chr1_1:10938681-10938700 Msa0007660:intron 35.0%
ATTAGTAAAGGTGAGCTGTT+TGG - chr1_1:10938747-10938766 Msa0007660:intron 35.0%
TTAGTAAAGGTGAGCTGTTT+GGG - chr1_1:10938748-10938767 Msa0007660:intron 35.0%
CAATTTCTTCTTGACCAGTA+AGG + chr1_1:10939298-10939317 None:intergenic 35.0%
! GTTGGTAAGTTGGCATATAT+AGG + chr1_1:10939392-10939411 None:intergenic 35.0%
!! TTGTAGTTCAGTTGGTAAGT+TGG + chr1_1:10939402-10939421 None:intergenic 35.0%
ATATTTGAACCAACTCCTGA+AGG - chr1_1:10939428-10939447 Msa0007660:intron 35.0%
TATTTGAACCAACTCCTGAA+GGG - chr1_1:10939429-10939448 Msa0007660:intron 35.0%
! TTTCTGCAATATTGGTAGCA+AGG + chr1_1:10939469-10939488 None:intergenic 35.0%
! CTTTTCATCTTAACGAATCC+TGG + chr1_1:10939530-10939549 None:intergenic 35.0%
! AGATTAGTCCGTTGTATTTC+AGG + chr1_1:10939713-10939732 None:intergenic 35.0%
TAAAGCAAATAGAAGCTCCA+GGG + chr1_1:10939831-10939850 None:intergenic 35.0%
TTAAAGCAAATAGAAGCTCC+AGG + chr1_1:10939832-10939851 None:intergenic 35.0%
TTGACAACATAGGATCAAGT+GGG + chr1_1:10939910-10939929 None:intergenic 35.0%
TTTGACAACATAGGATCAAG+TGG + chr1_1:10939911-10939930 None:intergenic 35.0%
! AATAGAAAGCATAGCAGCAA+TGG + chr1_1:10939981-10940000 None:intergenic 35.0%
ATTGCTGCTATGCTTTCTAT+TGG - chr1_1:10939980-10939999 Msa0007660:intron 35.0%
! CTCAATATTTTACCGTCCAA+AGG - chr1_1:10940006-10940025 Msa0007660:intron 35.0%
AGACCATATTGCATTGCTAA+AGG - chr1_1:10940084-10940103 Msa0007660:intron 35.0%
GAACCTTTAGCAATGCAATA+TGG + chr1_1:10940090-10940109 None:intergenic 35.0%
!! GCATCTTTGAAGTGGAAATT+AGG - chr1_1:10940170-10940189 Msa0007660:intron 35.0%
!! CTTTGAAGTGGAAATTAGGA+TGG - chr1_1:10940174-10940193 Msa0007660:intron 35.0%
! TCAGGGTATCCCTATAAATA+GGG + chr1_1:10940309-10940328 None:intergenic 35.0%
! CTTGATTTAGGATTGAGTCA+GGG + chr1_1:10940326-10940345 None:intergenic 35.0%
! TCTTGATTTAGGATTGAGTC+AGG + chr1_1:10940327-10940346 None:intergenic 35.0%
! TCCAACACTTTTCATCTAGA+TGG - chr1_1:10940417-10940436 Msa0007660:intron 35.0%
! TCCATCTAGATGAAAAGTGT+TGG + chr1_1:10940421-10940440 None:intergenic 35.0%
AGATACGGTGAGATTATTGT+TGG - chr1_1:10940463-10940482 Msa0007660:intron 35.0%
GATACGGTGAGATTATTGTT+GGG - chr1_1:10940464-10940483 Msa0007660:intron 35.0%
GCATGCATATGTATACTTGT+TGG - chr1_1:10940489-10940508 Msa0007660:intron 35.0%
! TCCTTGTTCTAGATTGTTGT+TGG - chr1_1:10940537-10940556 Msa0007660:intron 35.0%
! TCCAACAACAATCTAGAACA+AGG + chr1_1:10940541-10940560 None:intergenic 35.0%
AGTCATGGAAATAATAGTGG+AGG - chr1_1:10940694-10940713 Msa0007660:intron 35.0%
! TGAGTAATGTACCGTCATTT+TGG - chr1_1:10940820-10940839 Msa0007660:intron 35.0%
!! ATGTACCGTCATTTTGGATA+AGG - chr1_1:10940826-10940845 Msa0007660:CDS 35.0%
TCAGTCCTTATCCAAAATGA+CGG + chr1_1:10940834-10940853 None:intergenic 35.0%
CAGTCAATAAGGATAATAGG+GGG + chr1_1:10940886-10940905 None:intergenic 35.0%
CCACAGTCAATAAGGATAAT+AGG + chr1_1:10940889-10940908 None:intergenic 35.0%
! CCTATTATCCTTATTGACTG+TGG - chr1_1:10940886-10940905 Msa0007660:intron 35.0%
! ATTATCCTTATTGACTGTGG+AGG - chr1_1:10940889-10940908 Msa0007660:intron 35.0%
TGTCTTATCCTTTGTGTCTA+AGG - chr1_1:10941119-10941138 Msa0007660:intron 35.0%
!! CTTCTTGATGGTTTTTCACT+TGG - chr1_1:10941164-10941183 Msa0007660:intron 35.0%
! CTACATAAGAAATTTGAGGC+AGG + chr1_1:10941194-10941213 None:intergenic 35.0%
! TAGAACTTTTTGCAGCCTTA+TGG - chr1_1:10941224-10941243 Msa0007660:intron 35.0%
CATGAAATAAGAAACCCACT+TGG + chr1_1:10941478-10941497 None:intergenic 35.0%
! GTGGGTTTCTTATTTCATGT+TGG - chr1_1:10941479-10941498 Msa0007660:intron 35.0%
TGCACAAAAACGGATCATAT+CGG - chr1_1:10941859-10941878 Msa0007660:intron 35.0%
TCTTACAAACTGGATTTAGG+AGG + chr1_1:10942060-10942079 None:intergenic 35.0%
ACAACCCTTATCTTACAAAC+TGG + chr1_1:10942070-10942089 None:intergenic 35.0%
! GGAATTTAAGGTCTATGCAT+CGG + chr1_1:10942097-10942116 None:intergenic 35.0%
ATGCGGATCCCATATAAATT+TGG - chr1_1:10942338-10942357 Msa0007660:intron 35.0%
GGGTCTCACCAAATTTATAT+GGG + chr1_1:10942349-10942368 None:intergenic 35.0%
!! TGCTATAACAGGTTGATCTA+TGG + chr1_1:10942496-10942515 None:intergenic 35.0%
ATAGATCAACCTGTTATAGC+AGG - chr1_1:10942495-10942514 Msa0007660:intron 35.0%
TAGATCAACCTGTTATAGCA+GGG - chr1_1:10942496-10942515 Msa0007660:intron 35.0%
GCATCTGGATGTTCAATTTA+AGG - chr1_1:10942849-10942868 Msa0007660:intron 35.0%
! TCCACTTTGTTTATACTCGA+AGG - chr1_1:10942965-10942984 Msa0007660:intron 35.0%
ACCTTCGAGTATAAACAAAG+TGG + chr1_1:10942969-10942988 None:intergenic 35.0%
AACCAAGGAATATATGAGAC+AGG - chr1_1:10943028-10943047 Msa0007660:intron 35.0%
TACCTGTCTCATATATTCCT+TGG + chr1_1:10943033-10943052 None:intergenic 35.0%
CATTTGGTTGCTTAAATGCA+GGG + chr1_1:10943058-10943077 None:intergenic 35.0%
ACATTTGGTTGCTTAAATGC+AGG + chr1_1:10943059-10943078 None:intergenic 35.0%
CATACTGTCTTCAAGATCAT+TGG + chr1_1:10943200-10943219 None:intergenic 35.0%
ATTCCCTTAGGTTCCTAATT+TGG - chr1_1:10943276-10943295 Msa0007660:intron 35.0%
AAACCGAATTAGGAACCTAA+GGG + chr1_1:10943329-10943348 None:intergenic 35.0%
TAAACCGAATTAGGAACCTA+AGG + chr1_1:10943330-10943349 None:intergenic 35.0%
! AGTAGTACAATCTCCTTTTC+TGG + chr1_1:10944036-10944055 None:intergenic 35.0%
TAGGCATGAATATTCTGGTA+AGG + chr1_1:10944180-10944199 None:intergenic 35.0%
GAAAGTCAATTAGGAAGAGA+GGG + chr1_1:10944205-10944224 None:intergenic 35.0%
! TTCCCTCCCAAATCATTTTA+TGG - chr1_1:10944222-10944241 Msa0007660:intron 35.0%
! TCCCTCCCAAATCATTTTAT+GGG - chr1_1:10944223-10944242 Msa0007660:intron 35.0%
CTGCTTGAAAAATACTTGGA+GGG - chr1_1:10944247-10944266 Msa0007660:intron 35.0%
TGCTTGAAAAATACTTGGAG+GGG - chr1_1:10944248-10944267 Msa0007660:intron 35.0%
TGGAATTGGAAAAAGGAATC+AGG - chr1_1:10944328-10944347 Msa0007660:intron 35.0%
GGAATTGGAAAAAGGAATCA+GGG - chr1_1:10944329-10944348 Msa0007660:intron 35.0%
ATCAGGGTTGTTTAACAGAA+TGG - chr1_1:10944345-10944364 Msa0007660:intron 35.0%
GATATGTGGCAAACTAAGAT+TGG - chr1_1:10944367-10944386 Msa0007660:intron 35.0%
! GTTTAAAACCATCAAGCTCA+AGG - chr1_1:10944422-10944441 Msa0007660:intron 35.0%
GAAGTACATTCGTTAGAAAG+TGG - chr1_1:10944767-10944786 Msa0007660:intron 35.0%
!! TTAGAAAGTGGTTTTGCTAG+AGG - chr1_1:10944779-10944798 Msa0007660:intron 35.0%
!!! ATGGGTTTTTTAGGCTTTGT+TGG - chr1_1:10944911-10944930 Msa0007660:intron 35.0%
!! TTGGTGGTAATGGAAATTGA+CGG - chr1_1:10945014-10945033 Msa0007660:intron 35.0%
TACAAACCAACTTTATCCAC+AGG + chr1_1:10945173-10945192 None:intergenic 35.0%
TTGTGAACTTAAGTCACAGA+TGG - chr1_1:10945233-10945252 Msa0007660:five_prime_UTR 35.0%
GGTTTATGATTTCTTTGCGG+CGG + chr1_1:10929487-10929506 None:intergenic 40.0%
GAAGAGCAAAATGCAATACC+TGG + chr1_1:10929523-10929542 None:intergenic 40.0%
! TGTTTTCCTTCCCCTGTTAA+CGG - chr1_1:10929556-10929575 Msa0007660:three_prime_UTR 40.0%
! GTGAAAAGAAGCGTATGTCT+AGG + chr1_1:10929688-10929707 None:intergenic 40.0%
AGTAAGGAGATGGAATCAGA+TGG - chr1_1:10929809-10929828 Msa0007660:intron 40.0%
ATTGCAAGTAGCTGTCAAGA+AGG + chr1_1:10930350-10930369 None:intergenic 40.0%
TTCTTGACAGCTACTTGCAA+TGG - chr1_1:10930349-10930368 Msa0007660:intron 40.0%
!! GATAAGTTGATGTCACTGCT+TGG - chr1_1:10930551-10930570 Msa0007660:intron 40.0%
! TACTTCACCAGCTGATTTAG+TGG - chr1_1:10930739-10930758 Msa0007660:intron 40.0%
! ACTTCACCAGCTGATTTAGT+GGG - chr1_1:10930740-10930759 Msa0007660:intron 40.0%
TGATTTAGTGGGAAAGCTAG+TGG - chr1_1:10930751-10930770 Msa0007660:intron 40.0%
AATTTCTTCCACAAACGCAC+GGG + chr1_1:10930801-10930820 None:intergenic 40.0%
! GCGGACTTACACAATTTTGA+AGG - chr1_1:10931027-10931046 Msa0007660:intron 40.0%
TTGACCAAATGCAACAATGC+AGG - chr1_1:10931276-10931295 Msa0007660:intron 40.0%
CTTACCTGCATTGTTGCATT+TGG + chr1_1:10931283-10931302 None:intergenic 40.0%
CAACAATGCAGGTAAGTTCA+AGG - chr1_1:10931287-10931306 Msa0007660:intron 40.0%
CTGAACCACTATCTTCATCA+AGG + chr1_1:10931348-10931367 None:intergenic 40.0%
! TGATGAAGATAGTGGTTCAG+AGG - chr1_1:10931348-10931367 Msa0007660:intron 40.0%
AATCACATCAAGGGAGTTGA+TGG + chr1_1:10931722-10931741 None:intergenic 40.0%
!! GGAAGGTACTCATTAGTAGT+CGG - chr1_1:10931844-10931863 Msa0007660:intron 40.0%
TGATACCATCATGCTCAAGT+TGG - chr1_1:10931922-10931941 Msa0007660:intron 40.0%
GGTGAAAATGTGTGGAAGAT+GGG - chr1_1:10932011-10932030 Msa0007660:intron 40.0%
GTGAAAATGTGTGGAAGATG+GGG - chr1_1:10932012-10932031 Msa0007660:intron 40.0%
! AAACATTTAATGGGTGGGAG+AGG + chr1_1:10932127-10932146 None:intergenic 40.0%
! ACGAAAGGAAGAAGGTATGT+CGG - chr1_1:10932360-10932379 Msa0007660:intron 40.0%
GATTCTGTTGTGCTGTACAA+TGG - chr1_1:10932782-10932801 Msa0007660:intron 40.0%
! AAATCGTCTAGGACATGGTT+TGG - chr1_1:10932902-10932921 Msa0007660:intron 40.0%
GTGTCAAGCCAATTCTGTAA+AGG - chr1_1:10933518-10933537 Msa0007660:intron 40.0%
GGAAATGCTTTATGCAACCT+CGG - chr1_1:10933539-10933558 Msa0007660:intron 40.0%
AAAGAAAGACTATGGTACCG+AGG - chr1_1:10933578-10933597 Msa0007660:intron 40.0%
TATAGCTCTTTCTTGTGCCT+GGG + chr1_1:10933836-10933855 None:intergenic 40.0%
ATATAGCTCTTTCTTGTGCC+TGG + chr1_1:10933837-10933856 None:intergenic 40.0%
TATAAAAAAGCGGTCAGAGC+AGG - chr1_1:10933862-10933881 Msa0007660:intron 40.0%
TGGATAACGAGTGTTAGATC+AGG - chr1_1:10934090-10934109 Msa0007660:CDS 40.0%
TTGAGATTAGGAAGTCCTCT+AGG - chr1_1:10934304-10934323 Msa0007660:intron 40.0%
ATTAGGAAGTCCTCTAGGTT+GGG - chr1_1:10934309-10934328 Msa0007660:intron 40.0%
GAAAATTGGGATAGGATCCT+CGG - chr1_1:10934844-10934863 Msa0007660:CDS 40.0%
GCTAAACTCTCATGTTCTTC+TGG - chr1_1:10934919-10934938 Msa0007660:CDS 40.0%
CCTTCCTTATCATAAGTGTC+TGG + chr1_1:10934962-10934981 None:intergenic 40.0%
CCAGACACTTATGATAAGGA+AGG - chr1_1:10934959-10934978 Msa0007660:CDS 40.0%
GACACTTATGATAAGGAAGG+CGG - chr1_1:10934962-10934981 Msa0007660:CDS 40.0%
! CAATTGTAGTGGAGATCATG+AGG + chr1_1:10935044-10935063 None:intergenic 40.0%
CAATAGGGATTCAAATGCTG+AGG - chr1_1:10935471-10935490 Msa0007660:CDS 40.0%
CATGCCTCTTGTTCAGAAAA+TGG + chr1_1:10935508-10935527 None:intergenic 40.0%
! CATTTTCTGAACAAGAGGCA+TGG - chr1_1:10935506-10935525 Msa0007660:CDS 40.0%
TGTATGTAGGTTTGTGTTCG+AGG - chr1_1:10935905-10935924 Msa0007660:intron 40.0%
!!! TTTTATCAAGGCATCGGTGA+TGG - chr1_1:10935938-10935957 Msa0007660:intron 40.0%
!! ATCAGAGGCATTTGCAATTC+AGG - chr1_1:10936100-10936119 Msa0007660:intron 40.0%
TGTCAGTCTGTTGCATTAAC+CGG + chr1_1:10936436-10936455 None:intergenic 40.0%
ATCTGTTAGTCATTCCCACT+TGG + chr1_1:10936462-10936481 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG - chr1_1:10936494-10936513 Msa0007660:CDS 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr1_1:10936697-10936716 Msa0007660:intron 40.0%
!! GATAATCAAAGGGGCATTGA+AGG - chr1_1:10936737-10936756 Msa0007660:intron 40.0%
ATACTAGGGGAGAAGAAAGA+AGG - chr1_1:10936784-10936803 Msa0007660:intron 40.0%
TACTAGGGGAGAAGAAAGAA+GGG - chr1_1:10936785-10936804 Msa0007660:intron 40.0%
!! AGAAGGGTGCCAAAAAAAAC+GGG - chr1_1:10936801-10936820 Msa0007660:intron 40.0%
! ACTTTTCCGACTTCCTTTTC+AGG - chr1_1:10937352-10937371 Msa0007660:intron 40.0%
TTCTTTCTCTCCTCCTGAAA+AGG + chr1_1:10937368-10937387 None:intergenic 40.0%
ACCCATTTATACTTATCGGG+AGG - chr1_1:10937391-10937410 Msa0007660:intron 40.0%
!!! GTTCTGTCTTCTGGTTTTTG+AGG - chr1_1:10937497-10937516 Msa0007660:intron 40.0%
TTGTGTAGTCTTTCCAGAAC+CGG + chr1_1:10937649-10937668 None:intergenic 40.0%
CCAGCTTCATGAAGATATTG+GGG + chr1_1:10937675-10937694 None:intergenic 40.0%
GCCAGCTTCATGAAGATATT+GGG + chr1_1:10937676-10937695 None:intergenic 40.0%
AGCCAGCTTCATGAAGATAT+TGG + chr1_1:10937677-10937696 None:intergenic 40.0%
TGGCTACACAAAACATGGAA+TGG - chr1_1:10937692-10937711 Msa0007660:intron 40.0%
ACACAAAACATGGAATGGTG+TGG - chr1_1:10937697-10937716 Msa0007660:intron 40.0%
TACACTATATGGGAAGCAAG+AGG - chr1_1:10938370-10938389 Msa0007660:intron 40.0%
CTGATGTGCAATCCTCAAAA+CGG + chr1_1:10938510-10938529 None:intergenic 40.0%
AGTTATAGGTGAGCGCATAT+TGG - chr1_1:10938601-10938620 Msa0007660:intron 40.0%
! CGCATATTGGATTAGGATTC+TGG - chr1_1:10938614-10938633 Msa0007660:CDS 40.0%
!! GGATTAGGTTGGATGCTTTA+TGG - chr1_1:10938635-10938654 Msa0007660:CDS 40.0%
! AATCCAAGTGAGTTGAATGG+CGG - chr1_1:10938792-10938811 Msa0007660:CDS 40.0%
GCATTGTCTTCGCTTATATC+TGG - chr1_1:10938963-10938982 Msa0007660:intron 40.0%
GATATCAGCAACTTGAGATC+AGG + chr1_1:10939086-10939105 None:intergenic 40.0%
TTGGTGAAGTGTATTTCCAC+CGG + chr1_1:10939188-10939207 None:intergenic 40.0%
CTTAGATGCAGCTATTGTCA+CGG - chr1_1:10939226-10939245 Msa0007660:CDS 40.0%
ATCCATGTTACTCAATCTCC+TGG - chr1_1:10939257-10939276 Msa0007660:intron 40.0%
!! ATCTTGAAGCATCGAACTAG+AGG - chr1_1:10939332-10939351 Msa0007660:intron 40.0%
ATTTGAACCAACTCCTGAAG+GGG - chr1_1:10939430-10939449 Msa0007660:intron 40.0%
AAAGACTCCATTCCTGTCTT+TGG + chr1_1:10939560-10939579 None:intergenic 40.0%
!!! ATTGCTGAGGCTTTTGAGAT+GGG + chr1_1:10939593-10939612 None:intergenic 40.0%
ACACCGTTCCTGAAATACAA+CGG - chr1_1:10939702-10939721 Msa0007660:CDS 40.0%
AGTCCGTTGTATTTCAGGAA+CGG + chr1_1:10939708-10939727 None:intergenic 40.0%
TAAGCATGGTCAGTTAACCA+AGG - chr1_1:10939862-10939881 Msa0007660:intron 40.0%
AGTTAACCAAGGTAGGTAGA+CGG - chr1_1:10939873-10939892 Msa0007660:intron 40.0%
GCACTTGTTTATCCTTTGGA+CGG + chr1_1:10940021-10940040 None:intergenic 40.0%
GCATGCACTTGTTTATCCTT+TGG + chr1_1:10940025-10940044 None:intergenic 40.0%
! GCAAGACTGAATTTTCACTC+TGG - chr1_1:10940052-10940071 Msa0007660:intron 40.0%
TGAAGTGGAAATTAGGATGG+AGG - chr1_1:10940177-10940196 Msa0007660:intron 40.0%
! GTCAGGGTATCCCTATAAAT+AGG + chr1_1:10940310-10940329 None:intergenic 40.0%
CCTTCCAAGAATTGTAAACC+TGG + chr1_1:10940583-10940602 None:intergenic 40.0%
CCAGGTTTACAATTCTTGGA+AGG - chr1_1:10940580-10940599 Msa0007660:intron 40.0%
ATAAGGATAATAGGGGGAGT+AGG + chr1_1:10940880-10940899 None:intergenic 40.0%
!! CATGATTTTGTGGACTGTAG+TGG - chr1_1:10940914-10940933 Msa0007660:intron 40.0%
! TGCCTTACCCTCGATTTTAT+GGG - chr1_1:10941575-10941594 Msa0007660:CDS 40.0%
! TTGTGCAATTTTGCAGTGTG+TGG + chr1_1:10941846-10941865 None:intergenic 40.0%
TGTTGACATACACCCTAGTT+CGG - chr1_1:10941902-10941921 Msa0007660:intron 40.0%
ACAAACTGGATTTAGGAGGT+TGG + chr1_1:10942056-10942075 None:intergenic 40.0%
TGTGTCAGGATTTACACTCT+AGG - chr1_1:10942201-10942220 Msa0007660:CDS 40.0%
GTGTCAGGATTTACACTCTA+GGG - chr1_1:10942202-10942221 Msa0007660:CDS 40.0%
! TGTGTTAGAGTGAGTGTTGT+TGG + chr1_1:10942280-10942299 None:intergenic 40.0%
TTAGTGCGACCAATGAAAGA+GGG + chr1_1:10942315-10942334 None:intergenic 40.0%
TTTAGTGCGACCAATGAAAG+AGG + chr1_1:10942316-10942335 None:intergenic 40.0%
ATTGGTCGCACTAAATCATG+CGG - chr1_1:10942321-10942340 Msa0007660:intron 40.0%
GGGGTCTCACCAAATTTATA+TGG + chr1_1:10942350-10942369 None:intergenic 40.0%
TATGGATGACTGACAGTTGT+CGG + chr1_1:10942478-10942497 None:intergenic 40.0%
AAGAGTTACCCTGCTATAAC+AGG + chr1_1:10942507-10942526 None:intergenic 40.0%
TTATAGCAGGGTAACTCTTC+AGG - chr1_1:10942508-10942527 Msa0007660:intron 40.0%
! ACCAATAAAAGAGCGTGTGT+TGG - chr1_1:10942641-10942660 Msa0007660:intron 40.0%
! ACCAACACACGCTCTTTTAT+TGG + chr1_1:10942645-10942664 None:intergenic 40.0%
! GTTGAAAAGGGTTTGGTTGT+TGG - chr1_1:10942810-10942829 Msa0007660:intron 40.0%
GTTAAAGTCACAGTGGTTGT+TGG - chr1_1:10943150-10943169 Msa0007660:intron 40.0%
! ACGTCCTTTTATAGACCCTT+AGG - chr1_1:10943311-10943330 Msa0007660:intron 40.0%
GGAACCTAAGGGTCTATAAA+AGG + chr1_1:10943318-10943337 None:intergenic 40.0%
AGACCCTTAGGTTCCTAATT+CGG - chr1_1:10943323-10943342 Msa0007660:intron 40.0%
!! ATGCTCTAAGGGCCTATAAA+AGG + chr1_1:10943954-10943973 None:intergenic 40.0%
TACCATTGTGGATGCTCTAA+GGG + chr1_1:10943965-10943984 None:intergenic 40.0%
ATGGAGTCCATAAAGTGATG+TGG - chr1_1:10943997-10944016 Msa0007660:intron 40.0%
GTTAGAGCCACATCACTTTA+TGG + chr1_1:10944007-10944026 None:intergenic 40.0%
CTCTAACTGCTATCCAGAAA+AGG - chr1_1:10944020-10944039 Msa0007660:intron 40.0%
TGGTAAGGATAGGAACATGA+GGG + chr1_1:10944165-10944184 None:intergenic 40.0%
GGGAATAGGCATGAATATTC+TGG + chr1_1:10944185-10944204 None:intergenic 40.0%
CAATTAGGAAGAGAGGGAAT+AGG + chr1_1:10944199-10944218 None:intergenic 40.0%
GGAAAGTCAATTAGGAAGAG+AGG + chr1_1:10944206-10944225 None:intergenic 40.0%
TTTGGGAGGGAAAGTCAATT+AGG + chr1_1:10944214-10944233 None:intergenic 40.0%
! GCCCATAAAATGATTTGGGA+GGG + chr1_1:10944227-10944246 None:intergenic 40.0%
GCAGGCCCATAAAATGATTT+GGG + chr1_1:10944231-10944250 None:intergenic 40.0%
AGCAGGCCCATAAAATGATT+TGG + chr1_1:10944232-10944251 None:intergenic 40.0%
!!! CCTCCAAGTATTTTTCAAGC+AGG + chr1_1:10944249-10944268 None:intergenic 40.0%
CCTGCTTGAAAAATACTTGG+AGG - chr1_1:10944246-10944265 Msa0007660:intron 40.0%
! GTTGATAAATAGGGAAAGGG+TGG - chr1_1:10944500-10944519 Msa0007660:intron 40.0%
TCTAACGAATGTACTTCCTG+CGG + chr1_1:10944764-10944783 None:intergenic 40.0%
CCACTCAACTTCCGATATAT+CGG + chr1_1:10944945-10944964 None:intergenic 40.0%
ATATATCGGAAGTTGAGTGG+TGG - chr1_1:10944945-10944964 Msa0007660:intron 40.0%
!! TTGAGTGGTGGTTGATTTGA+AGG - chr1_1:10944957-10944976 Msa0007660:intron 40.0%
AATTTCCATTACCACCAACG+AGG + chr1_1:10945012-10945031 None:intergenic 40.0%
!!! GGTGTTGTTGATTTTTCGCT+GGG - chr1_1:10945035-10945054 Msa0007660:intron 40.0%
! TGATTTTTCGCTGGGTGTTT+AGG - chr1_1:10945043-10945062 Msa0007660:intron 40.0%
ATTGCACCTGTGGATAAAGT+TGG - chr1_1:10945164-10945183 Msa0007660:intron 40.0%
GAGCAAAATGCAATACCTGG+CGG + chr1_1:10929520-10929539 None:intergenic 45.0%
TGGTACATTGCCGTTAACAG+GGG + chr1_1:10929569-10929588 None:intergenic 45.0%
CTGGTACATTGCCGTTAACA+GGG + chr1_1:10929570-10929589 None:intergenic 45.0%
TCTGGTACATTGCCGTTAAC+AGG + chr1_1:10929571-10929590 None:intergenic 45.0%
TGGAAACAACTTGGCTTAGG+TGG - chr1_1:10929759-10929778 Msa0007660:three_prime_UTR 45.0%
AAGGAGATGGAATCAGATGG+AGG - chr1_1:10929812-10929831 Msa0007660:intron 45.0%
AGGAGATGGAATCAGATGGA+GGG - chr1_1:10929813-10929832 Msa0007660:intron 45.0%
ATTGAAAGTGGTCGGCTACA+TGG + chr1_1:10929950-10929969 None:intergenic 45.0%
AGAAGGCTCGGATGATTGAA+GGG + chr1_1:10930333-10930352 None:intergenic 45.0%
AAGAAGGCTCGGATGATTGA+AGG + chr1_1:10930334-10930353 None:intergenic 45.0%
AAGTAGCTGTCAAGAAGGCT+CGG + chr1_1:10930345-10930364 None:intergenic 45.0%
AGCTTTCCCACTAAATCAGC+TGG + chr1_1:10930749-10930768 None:intergenic 45.0%
TGGGAAAGCTAGTGGAGTTT+GGG - chr1_1:10930759-10930778 Msa0007660:intron 45.0%
TTTAAGCCAGACGATCTACG+AGG + chr1_1:10930836-10930855 None:intergenic 45.0%
AGAGAGAGAAGCTGCAATGT+TGG - chr1_1:10930994-10931013 Msa0007660:intron 45.0%
CAATGTTGGCAAGGAAACAG+CGG - chr1_1:10931008-10931027 Msa0007660:intron 45.0%
! TTACGACACAGTTTTGCAGC+TGG - chr1_1:10931402-10931421 Msa0007660:intron 45.0%
AGACACCAACTTGAGCATGA+TGG + chr1_1:10931930-10931949 None:intergenic 45.0%
GGGTGAAAATGTGTGGAAGA+TGG - chr1_1:10932010-10932029 Msa0007660:intron 45.0%
CCATGCTACTACTGTGAGAA+TGG + chr1_1:10932041-10932060 None:intergenic 45.0%
CCATTCTCACAGTAGTAGCA+TGG - chr1_1:10932038-10932057 Msa0007660:intron 45.0%
! AAAGGAAGAAGGTATGTCGG+TGG - chr1_1:10932363-10932382 Msa0007660:intron 45.0%
CTTCGAATTGCTTCGTCTGT+TGG + chr1_1:10932487-10932506 None:intergenic 45.0%
TCTGTTGTGCTGTACAATGG+AGG - chr1_1:10932785-10932804 Msa0007660:intron 45.0%
AGTTTAGTGGTGAGGGGTTT+GGG + chr1_1:10932846-10932865 None:intergenic 45.0%
TAGTTTAGTGGTGAGGGGTT+TGG + chr1_1:10932847-10932866 None:intergenic 45.0%
AGGTGTGAAGCTTTCAGAAG+TGG - chr1_1:10933387-10933406 Msa0007660:intron 45.0%
AAGTGGAACAGCGTGAGTTA+AGG - chr1_1:10933404-10933423 Msa0007660:intron 45.0%
GCTTTATGCAACCTCGGTAA+TGG - chr1_1:10933545-10933564 Msa0007660:intron 45.0%
! AAAGACTATGGTACCGAGGT+TGG - chr1_1:10933582-10933601 Msa0007660:intron 45.0%
! AAGACTATGGTACCGAGGTT+GGG - chr1_1:10933583-10933602 Msa0007660:intron 45.0%
ACAAGTGCTTTACCCAACCT+CGG + chr1_1:10933598-10933617 None:intergenic 45.0%
ATAGCTCTTTCTTGTGCCTG+GGG + chr1_1:10933835-10933854 None:intergenic 45.0%
GATTAGGAAGTCCTCTAGGT+TGG - chr1_1:10934308-10934327 Msa0007660:intron 45.0%
! TAGGTTGGGCAAGGAAATCT+AGG - chr1_1:10934323-10934342 Msa0007660:intron 45.0%
CTAGGACAAGGTTGTCTTAG+TGG - chr1_1:10934341-10934360 Msa0007660:intron 45.0%
GCATGGGAGGAACATCAAAT+TGG - chr1_1:10935523-10935542 Msa0007660:CDS 45.0%
GGAAAGGCAACACTGAAGTA+TGG - chr1_1:10935655-10935674 Msa0007660:intron 45.0%
!! ATCGGTGATGGATGGAGATA+AGG - chr1_1:10935950-10935969 Msa0007660:intron 45.0%
! TCAGTTACTTTGTGGCAGTC+AGG - chr1_1:10936352-10936371 Msa0007660:intron 45.0%
AACAGACTGACATCTCCAAG+TGG - chr1_1:10936444-10936463 Msa0007660:intron 45.0%
ACAGACTGACATCTCCAAGT+GGG - chr1_1:10936445-10936464 Msa0007660:intron 45.0%
GTAGGTCAATTATACCGGGA+CGG + chr1_1:10936492-10936511 None:intergenic 45.0%
CGATTCTACGATTATGGACG+AGG - chr1_1:10936931-10936950 Msa0007660:intron 45.0%
TTCTACGATTATGGACGAGG+TGG - chr1_1:10936934-10936953 Msa0007660:intron 45.0%
GAAGTCGTAACACTACTCGT+AGG + chr1_1:10937265-10937284 None:intergenic 45.0%
!! TTTCCGACTTCCTTTTCAGG+AGG - chr1_1:10937355-10937374 Msa0007660:intron 45.0%
TCTCCTCCTGAAAAGGAAGT+CGG + chr1_1:10937361-10937380 None:intergenic 45.0%
! ATTGTTGGTGAAACCGGTTC+TGG - chr1_1:10937633-10937652 Msa0007660:intron 45.0%
CCCCAATATCTTCATGAAGC+TGG - chr1_1:10937672-10937691 Msa0007660:intron 45.0%
GAAGCTGGCTACACAAAACA+TGG - chr1_1:10937687-10937706 Msa0007660:intron 45.0%
TCGTGTCATCGAATTGCAAG+TGG - chr1_1:10938070-10938089 Msa0007660:intron 45.0%
AGGTGTTAAACTAGGACACG+AGG - chr1_1:10938242-10938261 Msa0007660:intron 45.0%
GTTAAACTAGGACACGAGGT+AGG - chr1_1:10938246-10938265 Msa0007660:intron 45.0%
TGTGCAATCCTCAAAACGGA+TGG + chr1_1:10938506-10938525 None:intergenic 45.0%
ATTTCTTGGTGAGCCTGATC+TGG - chr1_1:10938576-10938595 Msa0007660:intron 45.0%
AGCCTGATCTGGCAAGTTAT+AGG - chr1_1:10938587-10938606 Msa0007660:intron 45.0%
! CACCTATAACTTGCCAGATC+AGG + chr1_1:10938592-10938611 None:intergenic 45.0%
AGGTGAGCGCATATTGGATT+AGG - chr1_1:10938607-10938626 Msa0007660:CDS 45.0%
!! TAGTGTTGTGATGGTGGATG+AGG - chr1_1:10938687-10938706 Msa0007660:intron 45.0%
TCAGCAACTTGAGATCAGGT+CGG + chr1_1:10939082-10939101 None:intergenic 45.0%
!! AATTCCAGGGAGAAGGTATC+CGG - chr1_1:10939166-10939185 Msa0007660:intron 45.0%
GCATCTAAGTAGTCAGCTTC+TGG + chr1_1:10939215-10939234 None:intergenic 45.0%
CTCCAGGAGATTGAGTAACA+TGG + chr1_1:10939262-10939281 None:intergenic 45.0%
!! AAGCATCGAACTAGAGGCTT+AGG - chr1_1:10939338-10939357 Msa0007660:intron 45.0%
! AGCATCGAACTAGAGGCTTA+GGG - chr1_1:10939339-10939358 Msa0007660:intron 45.0%
!! CATTGCTGAGGCTTTTGAGA+TGG + chr1_1:10939594-10939613 None:intergenic 45.0%
!!! TACAACCGGAAGCATTTTCC+CGG + chr1_1:10939647-10939666 None:intergenic 45.0%
TTCAATAAGGCCTCAGTAGG+TGG + chr1_1:10939806-10939825 None:intergenic 45.0%
GCTTTCAATAAGGCCTCAGT+AGG + chr1_1:10939809-10939828 None:intergenic 45.0%
AAGCTCCAGGGCTTTCAATA+AGG + chr1_1:10939819-10939838 None:intergenic 45.0%
CATGGTCAGTTAACCAAGGT+AGG - chr1_1:10939866-10939885 Msa0007660:intron 45.0%
! GTGCTTGTGCATCTTTGAAG+TGG - chr1_1:10940162-10940181 Msa0007660:intron 45.0%
! TCCTAGTTCTCTCCCATACA+CGG - chr1_1:10940200-10940219 Msa0007660:intron 45.0%
! CTTTTCCCTACTCCGTGTAT+GGG + chr1_1:10940215-10940234 None:intergenic 45.0%
! TCTTTTCCCTACTCCGTGTA+TGG + chr1_1:10940216-10940235 None:intergenic 45.0%
AGGAAATCAAGGAAAGCGAG+CGG - chr1_1:10940714-10940733 Msa0007660:intron 45.0%
ATGCACCTCCACAGTCAATA+AGG + chr1_1:10940897-10940916 None:intergenic 45.0%
!! TGTGGAGGTGCATGATTTTG+TGG - chr1_1:10940904-10940923 Msa0007660:intron 45.0%
GTCGGACAAACATTGCCATA+AGG + chr1_1:10941242-10941261 None:intergenic 45.0%
TTCTAAGTACTCGGGAGAGT+CGG + chr1_1:10941260-10941279 None:intergenic 45.0%
!! GTGGCATTGACTTGAAACCT+GGG + chr1_1:10941446-10941465 None:intergenic 45.0%
!! TGTGGCATTGACTTGAAACC+TGG + chr1_1:10941447-10941466 None:intergenic 45.0%
AAAATCGAGGGTAAGGCACA+AGG + chr1_1:10941573-10941592 None:intergenic 45.0%
! GTGCCTTACCCTCGATTTTA+TGG - chr1_1:10941574-10941593 Msa0007660:CDS 45.0%
! GCCTTACCCTCGATTTTATG+GGG - chr1_1:10941576-10941595 Msa0007660:CDS 45.0%
ACCCCATAAAATCGAGGGTA+AGG + chr1_1:10941580-10941599 None:intergenic 45.0%
!! ATAGACCTGCGAGTTGATCA+CGG + chr1_1:10941662-10941681 None:intergenic 45.0%
AACTCGCAGGTCTATTAGAG+AGG - chr1_1:10941667-10941686 Msa0007660:intron 45.0%
ACTCGCAGGTCTATTAGAGA+GGG - chr1_1:10941668-10941687 Msa0007660:intron 45.0%
GTTGACATACACCCTAGTTC+GGG - chr1_1:10941903-10941922 Msa0007660:intron 45.0%
TTGACATACACCCTAGTTCG+GGG - chr1_1:10941904-10941923 Msa0007660:intron 45.0%
! CTGGATTTAGGAGGTTGGTT+GGG + chr1_1:10942051-10942070 None:intergenic 45.0%
! ACTGGATTTAGGAGGTTGGT+TGG + chr1_1:10942052-10942071 None:intergenic 45.0%
! TGAACCGCAATTTGAAGCCA+TGG - chr1_1:10942138-10942157 Msa0007660:intron 45.0%
ACCACCATGGCTTCAAATTG+CGG + chr1_1:10942145-10942164 None:intergenic 45.0%
TACCATACCTTTCTGAGTCG+AGG + chr1_1:10942173-10942192 None:intergenic 45.0%
! TCGACTCAGAAAGGTATGGT+AGG - chr1_1:10942172-10942191 Msa0007660:intron 45.0%
ATGGTAGGCATGTTTGTGTC+AGG - chr1_1:10942187-10942206 Msa0007660:CDS 45.0%
TCTAGGGACGACAAGAGATT+GGG - chr1_1:10942218-10942237 Msa0007660:intron 45.0%
AGTTGTCGGTCAGTTAACAG+CGG + chr1_1:10942464-10942483 None:intergenic 45.0%
GTTGTTTGTGTGTGTGCATC+TGG - chr1_1:10942834-10942853 Msa0007660:intron 45.0%
TCATGGTACACAACGCATCT+TGG + chr1_1:10942996-10943015 None:intergenic 45.0%
TGGTTGTGAGCACTAGTTCA+TGG + chr1_1:10943013-10943032 None:intergenic 45.0%
TGAACTAGTGCTCACAACCA+AGG - chr1_1:10943013-10943032 Msa0007660:intron 45.0%
TCACGGAGTTAAAGTCACAG+TGG - chr1_1:10943143-10943162 Msa0007660:intron 45.0%
!! ATTGGGCTGGTAATAGTGAG+GGG + chr1_1:10943182-10943201 None:intergenic 45.0%
!! CATTGGGCTGGTAATAGTGA+GGG + chr1_1:10943183-10943202 None:intergenic 45.0%
!! TCATTGGGCTGGTAATAGTG+AGG + chr1_1:10943184-10943203 None:intergenic 45.0%
TGTCTTCAAGATCATTGGGC+TGG + chr1_1:10943195-10943214 None:intergenic 45.0%
TATCGTTGTTCTACGCTGCA+AGG - chr1_1:10943242-10943261 Msa0007660:intron 45.0%
TTGCCATCGGAGTCCTTAAT+AGG - chr1_1:10943805-10943824 Msa0007660:intron 45.0%
GTTCCTATTAAGGACTCCGA+TGG + chr1_1:10943811-10943830 None:intergenic 45.0%
CTACCATTGTGGATGCTCTA+AGG + chr1_1:10943966-10943985 None:intergenic 45.0%
GGTAAGGATAGGAACATGAG+GGG + chr1_1:10944164-10944183 None:intergenic 45.0%
CTGGTAAGGATAGGAACATG+AGG + chr1_1:10944166-10944185 None:intergenic 45.0%
! GGCCCATAAAATGATTTGGG+AGG + chr1_1:10944228-10944247 None:intergenic 45.0%
GGGCCTGCTTGAAAAATACT+TGG - chr1_1:10944243-10944262 Msa0007660:intron 45.0%
AGTGTTAGACCCAGTGACAT+TGG - chr1_1:10944276-10944295 Msa0007660:intron 45.0%
ATCATGCCTCCAATGTCACT+GGG + chr1_1:10944288-10944307 None:intergenic 45.0%
ATCTCAAAGAAAATGCCCCG+TGG - chr1_1:10944720-10944739 Msa0007660:intron 45.0%
TGGTGTCTCCTCCGATATAT+CGG - chr1_1:10944931-10944950 Msa0007660:intron 45.0%
CTCAACTTCCGATATATCGG+AGG + chr1_1:10944942-10944961 None:intergenic 45.0%
CCGATATATCGGAAGTTGAG+TGG - chr1_1:10944942-10944961 Msa0007660:intron 45.0%
! GCTGCTTTATTGAACCTCGT+TGG - chr1_1:10944995-10945014 Msa0007660:intron 45.0%
! GCTTTATTGAACCTCGTTGG+TGG - chr1_1:10944998-10945017 Msa0007660:intron 45.0%
!! TTGAACCTCGTTGGTGGTAA+TGG - chr1_1:10945004-10945023 Msa0007660:intron 45.0%
!!! CGGTGTTGTTGATTTTTCGC+TGG - chr1_1:10945034-10945053 Msa0007660:intron 45.0%
GTGGTTATTCATTGCACCTG+TGG - chr1_1:10945154-10945173 Msa0007660:intron 45.0%
!!! TTTAATTTTATAATTAGTTT+AGG + chr1_1:10929867-10929886 None:intergenic 5.0%
!!! ATTGTATATAATAATTTTTA+GGG + chr1_1:10930644-10930663 None:intergenic 5.0%
!! TTAAATAATTCAATTAATAA+TGG - chr1_1:10936129-10936148 Msa0007660:CDS 5.0%
!! TATAACTATTAAATATTTAT+GGG + chr1_1:10936231-10936250 None:intergenic 5.0%
!! TTATAACTATTAAATATTTA+TGG + chr1_1:10936232-10936251 None:intergenic 5.0%
!!! TTTTAAAATAAATAAAATGA+TGG - chr1_1:10936282-10936301 Msa0007660:intron 5.0%
!! TTAATATACATATTATTTAT+AGG + chr1_1:10936380-10936399 None:intergenic 5.0%
!! TATAAATAATATGTATATTA+AGG - chr1_1:10936379-10936398 Msa0007660:intron 5.0%
!! AAATCTTAATATTTATTATT+AGG + chr1_1:10940386-10940405 None:intergenic 5.0%
!! TAATAATAAATATTAAGATT+TGG - chr1_1:10940385-10940404 Msa0007660:intron 5.0%
!! TAAAAAATTATAAATAAATG+AGG - chr1_1:10943837-10943856 Msa0007660:intron 5.0%
ACATTGCCGTTAACAGGGGA+AGG + chr1_1:10929565-10929584 None:intergenic 50.0%
AGTCAAACCACTAGAGACCG+AGG - chr1_1:10929837-10929856 Msa0007660:intron 50.0%
!! TGCTCGCCATTTTCACTGCA+AGG + chr1_1:10930505-10930524 None:intergenic 50.0%
!! AGCTGGTGAAGTAGCTTGCT+TGG + chr1_1:10930732-10930751 None:intergenic 50.0%
GTGGGAAAGCTAGTGGAGTT+TGG - chr1_1:10930758-10930777 Msa0007660:intron 50.0%
AGAGTTCCTCGTAGATCGTC+TGG - chr1_1:10930827-10930846 Msa0007660:intron 50.0%
GAGAAGCTGCAATGTTGGCA+AGG - chr1_1:10930999-10931018 Msa0007660:intron 50.0%
AAAGAGATGCTGCAGCGACA+CGG - chr1_1:10931823-10931842 Msa0007660:intron 50.0%
!! CTGTCTAGTCTCTGAGACAG+AGG - chr1_1:10932712-10932731 Msa0007660:intron 50.0%
GCTGTACAATGGAGGCAACA+AGG - chr1_1:10932793-10932812 Msa0007660:CDS 50.0%
GGTAGTATGCACGAGGTTCT+AGG + chr1_1:10932825-10932844 None:intergenic 50.0%
ATTTGGGCACATGACACCGA+CGG + chr1_1:10932974-10932993 None:intergenic 50.0%
! CGCTTTTGATCGCGGAAAGT+TGG - chr1_1:10933057-10933076 Msa0007660:CDS 50.0%
AAAAAAGCGGTCAGAGCAGG+CGG - chr1_1:10933865-10933884 Msa0007660:intron 50.0%
GCAGGCGGACAATGTAAATG+AGG - chr1_1:10933880-10933899 Msa0007660:intron 50.0%
GATTTCCTTGCCCAACCTAG+AGG + chr1_1:10934322-10934341 None:intergenic 50.0%
! GGGCAAGGAAATCTAGGACA+AGG - chr1_1:10934329-10934348 Msa0007660:intron 50.0%
!! GCGGCGTTGATCAAGAAAAG+AGG - chr1_1:10934981-10935000 Msa0007660:CDS 50.0%
! TTCTGAACAAGAGGCATGGG+AGG - chr1_1:10935510-10935529 Msa0007660:CDS 50.0%
!! ATCAAGGCATCGGTGATGGA+TGG - chr1_1:10935942-10935961 Msa0007660:intron 50.0%
!! CTCTGATGCCGACTTTGCTT+TGG + chr1_1:10936087-10936106 None:intergenic 50.0%
CAAAGCAAAGTCGGCATCAG+AGG - chr1_1:10936085-10936104 Msa0007660:intron 50.0%
TGGATCTAGTCTCTCCTGGA+GGG - chr1_1:10936409-10936428 Msa0007660:intron 50.0%
AACAGATACTACCTCCGTCC+CGG - chr1_1:10936475-10936494 Msa0007660:CDS 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr1_1:10936701-10936720 Msa0007660:intron 50.0%
!! TGCCAAAAAAAACGGGCTGC+AGG - chr1_1:10936808-10936827 Msa0007660:intron 50.0%
!! GCCAAAAAAAACGGGCTGCA+GGG - chr1_1:10936809-10936828 Msa0007660:intron 50.0%
!! CCAAAAAAAACGGGCTGCAG+GGG - chr1_1:10936810-10936829 Msa0007660:intron 50.0%
TACGATTATGGACGAGGTGG+TGG - chr1_1:10936937-10936956 Msa0007660:intron 50.0%
!! CGAGGTGGTGGAACTACAAA+AGG - chr1_1:10936949-10936968 Msa0007660:intron 50.0%
TTATCGGGAGGAATTGCTCC+AGG - chr1_1:10937403-10937422 Msa0007660:intron 50.0%
CCACACTCATAGCAGCAACA+CGG + chr1_1:10938200-10938219 None:intergenic 50.0%
! GCTCGAGTTGCTCACGAATT+AGG - chr1_1:10938222-10938241 Msa0007660:intron 50.0%
! TGGGTACTCCATCCGTTTTG+AGG - chr1_1:10938495-10938514 Msa0007660:intron 50.0%
CATCCGCCATTCAACTCACT+TGG + chr1_1:10938798-10938817 None:intergenic 50.0%
GTAGTCAGCTTCTGGTGCTT+TGG + chr1_1:10939207-10939226 None:intergenic 50.0%
!! TCGTTCTGGAAGAACAGGTC+CGG - chr1_1:10939625-10939644 Msa0007660:intron 50.0%
TATGGATCCTCCACCTACTG+AGG - chr1_1:10939793-10939812 Msa0007660:intron 50.0%
AATAAGGCCTCAGTAGGTGG+AGG + chr1_1:10939803-10939822 None:intergenic 50.0%
!! TGAGGCCTTATTGAAAGCCC+TGG - chr1_1:10939811-10939830 Msa0007660:intron 50.0%
AACCAAGGTAGGTAGACGGA+TGG - chr1_1:10939877-10939896 Msa0007660:intron 50.0%
TCCGTGTATGGGAGAGAACT+AGG + chr1_1:10940204-10940223 None:intergenic 50.0%
TTCTCTCCCATACACGGAGT+AGG - chr1_1:10940206-10940225 Msa0007660:intron 50.0%
TCTCTCCCATACACGGAGTA+GGG - chr1_1:10940207-10940226 Msa0007660:intron 50.0%
! TACCGTAGCCTTTTCCCACT+GGG - chr1_1:10941067-10941086 Msa0007660:intron 50.0%
TGGTCGCTCCTTAGACACAA+AGG + chr1_1:10941130-10941149 None:intergenic 50.0%
! ATTCTCCCCGGTGCTAACTT+GGG + chr1_1:10941393-10941412 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+AGG - chr1_1:10941409-10941428 Msa0007660:intron 50.0%
GATATCCGTGATCAACTCGC+AGG - chr1_1:10941654-10941673 Msa0007660:intron 50.0%
! ACCGCAATTTGAAGCCATGG+TGG - chr1_1:10942141-10942160 Msa0007660:intron 50.0%
GTGATGACCTCGACTCAGAA+AGG - chr1_1:10942163-10942182 Msa0007660:intron 50.0%
GACCTCGACTCAGAAAGGTA+TGG - chr1_1:10942168-10942187 Msa0007660:intron 50.0%
! CTCTAGGGACGACAAGAGAT+TGG - chr1_1:10942217-10942236 Msa0007660:intron 50.0%
GAGTCGAGCACAATTCCCTT+AGG - chr1_1:10943264-10943283 Msa0007660:intron 50.0%
CCGATGGCAATACACTAACG+CGG + chr1_1:10943795-10943814 None:intergenic 50.0%
CCGCGTTAGTGTATTGCCAT+CGG - chr1_1:10943792-10943811 Msa0007660:intron 50.0%
GTTAGACCCAGTGACATTGG+AGG - chr1_1:10944279-10944298 Msa0007660:intron 50.0%
CATCATGCCTCCAATGTCAC+TGG + chr1_1:10944289-10944308 None:intergenic 50.0%
CTTGGCTACCTTGAGCTTGA+TGG + chr1_1:10944433-10944452 None:intergenic 50.0%
AAGAAAATGCCCCGTGGAGA+AGG - chr1_1:10944726-10944745 Msa0007660:intron 50.0%
ATACCTGGCGGCGTTTCTGA+CGG + chr1_1:10929508-10929527 None:intergenic 55.0%
AGGTCTTCCTCGGTCTCTAG+TGG + chr1_1:10929847-10929866 None:intergenic 55.0%
TTAATCGGGCCGGCCCAAAA+AGG - chr1_1:10930265-10930284 Msa0007660:intron 55.0%
!! TTGCGGGCTACGGCCTTTTT+GGG + chr1_1:10930281-10930300 None:intergenic 55.0%
!! TTTGCGGGCTACGGCCTTTT+TGG + chr1_1:10930282-10930301 None:intergenic 55.0%
AACAGACACCCGTGCGTTTG+TGG - chr1_1:10930790-10930809 Msa0007660:intron 55.0%
GGGTTTGGGTAGTATGCACG+AGG + chr1_1:10932832-10932851 None:intergenic 55.0%
TTTGGGCACATGACACCGAC+GGG + chr1_1:10932973-10932992 None:intergenic 55.0%
! GAAGTCCTCTAGGTTGGGCA+AGG - chr1_1:10934314-10934333 Msa0007660:intron 55.0%
TGGGATAGGATCCTCGGCAA+AGG - chr1_1:10934850-10934869 Msa0007660:CDS 55.0%
GGGATAGGATCCTCGGCAAA+GGG - chr1_1:10934851-10934870 Msa0007660:CDS 55.0%
GGATAGGATCCTCGGCAAAG+GGG - chr1_1:10934852-10934871 Msa0007660:CDS 55.0%
TCCTCGGCAAAGGGGTCATT+TGG - chr1_1:10934860-10934879 Msa0007660:CDS 55.0%
CCTCGGCAAAGGGGTCATTT+GGG - chr1_1:10934861-10934880 Msa0007660:CDS 55.0%
CTGTGGCTATGCAGCGTTAC+AGG - chr1_1:10935008-10935027 Msa0007660:CDS 55.0%
GCAGTGGATCTAGTCTCTCC+TGG - chr1_1:10936405-10936424 Msa0007660:intron 55.0%
GTGGATCTAGTCTCTCCTGG+AGG - chr1_1:10936408-10936427 Msa0007660:intron 55.0%
TTGCATTAACCGGTCCCTCC+AGG + chr1_1:10936426-10936445 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG + chr1_1:10936489-10936508 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr1_1:10936705-10936724 Msa0007660:intron 55.0%
!!! CCCCTGCAGCCCGTTTTTTT+TGG + chr1_1:10936813-10936832 None:intergenic 55.0%
CTGTTCATGACCACCAGGCA+TGG - chr1_1:10937426-10937445 Msa0007660:intron 55.0%
AAAAGGGGGGTAACCATGCC+TGG + chr1_1:10937442-10937461 None:intergenic 55.0%
! CCGTGTTGCTGCTATGAGTG+TGG - chr1_1:10938197-10938216 Msa0007660:intron 55.0%
GCAACTTGAGATCAGGTCGG+AGG + chr1_1:10939079-10939098 None:intergenic 55.0%
TTTCGTGCCCCTTCAGGAGT+TGG + chr1_1:10939440-10939459 None:intergenic 55.0%
! AACTCCTGAAGGGGCACGAA+AGG - chr1_1:10939439-10939458 Msa0007660:intron 55.0%
ACAACCTTTCGTGCCCCTTC+AGG + chr1_1:10939446-10939465 None:intergenic 55.0%
ACCAGCTCGTTGCATTGCTG+AGG + chr1_1:10939606-10939625 None:intergenic 55.0%
ATGCAACGAGCTGGTCGTTC+TGG - chr1_1:10939611-10939630 Msa0007660:intron 55.0%
!! GCTGGTCGTTCTGGAAGAAC+AGG - chr1_1:10939620-10939639 Msa0007660:intron 55.0%
!! CGTTCTGGAAGAACAGGTCC+GGG - chr1_1:10939626-10939645 Msa0007660:intron 55.0%
CAGGTCCGGGAAAATGCTTC+CGG - chr1_1:10939639-10939658 Msa0007660:intron 55.0%
TGCCATCCGTCTACCTACCT+TGG + chr1_1:10939882-10939901 None:intergenic 55.0%
! CTACCGTAGCCTTTTCCCAC+TGG - chr1_1:10941066-10941085 Msa0007660:intron 55.0%
CACCCAGTGGGAAAAGGCTA+CGG + chr1_1:10941072-10941091 None:intergenic 55.0%
! GTAGCCTTTTCCCACTGGGT+GGG - chr1_1:10941071-10941090 Msa0007660:intron 55.0%
! TAGCCTTTTCCCACTGGGTG+GGG - chr1_1:10941072-10941091 Msa0007660:intron 55.0%
AAACCCCACCCAGTGGGAAA+AGG + chr1_1:10941078-10941097 None:intergenic 55.0%
GTAGTCAAACCCCACCCAGT+GGG + chr1_1:10941084-10941103 None:intergenic 55.0%
TGTAGTCAAACCCCACCCAG+TGG + chr1_1:10941085-10941104 None:intergenic 55.0%
TAGCCCACCCAAGTTAGCAC+CGG - chr1_1:10941383-10941402 Msa0007660:intron 55.0%
! GATTCTCCCCGGTGCTAACT+TGG + chr1_1:10941394-10941413 None:intergenic 55.0%
GTCTCAGGTTCGATTCTCCC+CGG + chr1_1:10941405-10941424 None:intergenic 55.0%
! GTGCTACTCCTCAAGGTCTC+AGG + chr1_1:10941420-10941439 None:intergenic 55.0%
! TGGGAGTGTGCTACTCCTCA+AGG + chr1_1:10941427-10941446 None:intergenic 55.0%
TTGAGGAGTAGCACACTCCC+AGG - chr1_1:10941426-10941445 Msa0007660:intron 55.0%
AGTCGAGGTCATCACCACCA+TGG + chr1_1:10942158-10942177 None:intergenic 55.0%
AAGTGCCAGTTGTGTGCAGC+TGG + chr1_1:10942436-10942455 None:intergenic 55.0%
! GGCCCTTAGAGCATCCACAA+TGG - chr1_1:10943960-10943979 Msa0007660:CDS 55.0%
TCTCTGCACGTCCTTCTCCA+CGG + chr1_1:10944740-10944759 None:intergenic 55.0%
GATTTCTTTGCGGCGGCGAG+CGG + chr1_1:10929480-10929499 None:intergenic 60.0%
AAACCGTCAGAAACGCCGCC+AGG - chr1_1:10929502-10929521 Msa0007660:three_prime_UTR 60.0%
TGTCCAAGCCCGGCTCTTTG+CGG + chr1_1:10930298-10930317 None:intergenic 60.0%
AGATGCTGCAGCGACACGGA+AGG - chr1_1:10931827-10931846 Msa0007660:intron 60.0%
CCCAAATGACCCCTTTGCCG+AGG + chr1_1:10934864-10934883 None:intergenic 60.0%
CTAGTCTCTCCTGGAGGGAC+CGG - chr1_1:10936414-10936433 Msa0007660:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr1_1:10936704-10936723 Msa0007660:intron 60.0%
CTTTGCTACTCCCTCCGTCC+CGG + chr1_1:10936718-10936737 None:intergenic 60.0%
CCTGGTGGTCATGAACAGCC+TGG + chr1_1:10937424-10937443 None:intergenic 60.0%
CCAGGCTGTTCATGACCACC+AGG - chr1_1:10937421-10937440 Msa0007660:intron 60.0%
CTCATAGCAGCAACACGGCG+TGG + chr1_1:10938195-10938214 None:intergenic 60.0%
!! TCCAGGGAGAAGGTATCCGG+TGG - chr1_1:10939169-10939188 Msa0007660:intron 60.0%
TCCACCGGATACCTTCTCCC+TGG + chr1_1:10939173-10939192 None:intergenic 60.0%
GCCTCAGCAATGCAACGAGC+TGG - chr1_1:10939602-10939621 Msa0007660:intron 60.0%
! CGTAGCCTTTTCCCACTGGG+TGG - chr1_1:10941070-10941089 Msa0007660:intron 60.0%
AGCCCACCCAAGTTAGCACC+GGG - chr1_1:10941384-10941403 Msa0007660:intron 60.0%
! TCCCCGGTGCTAACTTGGGT+GGG + chr1_1:10941389-10941408 None:intergenic 60.0%
CATACACCCTAGTTCGGGGC+TGG - chr1_1:10941908-10941927 Msa0007660:intron 60.0%
GGATGCCAGCTGCACACAAC+TGG - chr1_1:10942428-10942447 Msa0007660:intron 60.0%
TCTGCACGTCCTTCTCCACG+GGG + chr1_1:10944738-10944757 None:intergenic 60.0%
CTCTGCACGTCCTTCTCCAC+GGG + chr1_1:10944739-10944758 None:intergenic 60.0%
AAGGACGTGCAGAGAACCGC+AGG - chr1_1:10944745-10944764 Msa0007660:intron 60.0%
!! GGGCTACGGCCTTTTTGGGC+CGG + chr1_1:10930277-10930296 None:intergenic 65.0%
GTCCAAGCCCGGCTCTTTGC+GGG + chr1_1:10930297-10930316 None:intergenic 65.0%
AGGGGGGTAACCATGCCTGG+TGG + chr1_1:10937439-10937458 None:intergenic 65.0%
GCCCACCCAAGTTAGCACCG+GGG - chr1_1:10941385-10941404 Msa0007660:intron 65.0%
! CTCCCCGGTGCTAACTTGGG+TGG + chr1_1:10941390-10941409 None:intergenic 65.0%
CCTGTGCCAGCCCCGAACTA+GGG + chr1_1:10941917-10941936 None:intergenic 65.0%
ACCTGTGCCAGCCCCGAACT+AGG + chr1_1:10941918-10941937 None:intergenic 65.0%
! CGGGGCTGGCACAGGTACTT+TGG - chr1_1:10941922-10941941 Msa0007660:intron 65.0%
GGCCGTAGCCCGCAAAGAGC+CGG - chr1_1:10930286-10930305 Msa0007660:intron 70.0%
GCCGTAGCCCGCAAAGAGCC+GGG - chr1_1:10930287-10930306 Msa0007660:intron 70.0%
! GCCCGGCTCTTTGCGGGCTA+CGG + chr1_1:10930291-10930310 None:intergenic 70.0%
AGCCCGCAAAGAGCCGGGCT+TGG - chr1_1:10930292-10930311 Msa0007660:intron 70.0%
! CCCTAGTTCGGGGCTGGCAC+AGG - chr1_1:10941914-10941933 Msa0007660:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 10929469 10945257 10929469 ID=Msa0007660;Name=Msa0007660
chr1_1 mRNA 10929469 10945257 10929469 ID=Msa0007660-mRNA-1;Parent=Msa0007660;Name=Msa0007660-mRNA-1;_AED=0.12;_eAED=0.12;_QI=60|1|1|1|0.92|0.86|29|448|1060
chr1_1 exon 10929469 10929815 10929469 ID=Msa0007660-mRNA-1:exon:4094;Parent=Msa0007660-mRNA-1
chr1_1 exon 10929843 10930008 10929843 ID=Msa0007660-mRNA-1:exon:4093;Parent=Msa0007660-mRNA-1
chr1_1 exon 10931512 10931584 10931512 ID=Msa0007660-mRNA-1:exon:4092;Parent=Msa0007660-mRNA-1
chr1_1 exon 10931677 10931739 10931677 ID=Msa0007660-mRNA-1:exon:4091;Parent=Msa0007660-mRNA-1
chr1_1 exon 10932791 10932891 10932791 ID=Msa0007660-mRNA-1:exon:4090;Parent=Msa0007660-mRNA-1
chr1_1 exon 10932973 10933096 10932973 ID=Msa0007660-mRNA-1:exon:4089;Parent=Msa0007660-mRNA-1
chr1_1 exon 10934080 10934142 10934080 ID=Msa0007660-mRNA-1:exon:4088;Parent=Msa0007660-mRNA-1
chr1_1 exon 10934621 10935661 10934621 ID=Msa0007660-mRNA-1:exon:4087;Parent=Msa0007660-mRNA-1
chr1_1 exon 10935970 10936036 10935970 ID=Msa0007660-mRNA-1:exon:4086;Parent=Msa0007660-mRNA-1
chr1_1 exon 10936118 10936233 10936118 ID=Msa0007660-mRNA-1:exon:4085;Parent=Msa0007660-mRNA-1
chr1_1 exon 10936463 10936549 10936463 ID=Msa0007660-mRNA-1:exon:4084;Parent=Msa0007660-mRNA-1
chr1_1 exon 10937013 10937102 10937013 ID=Msa0007660-mRNA-1:exon:4083;Parent=Msa0007660-mRNA-1
chr1_1 exon 10937284 10937352 10937284 ID=Msa0007660-mRNA-1:exon:4082;Parent=Msa0007660-mRNA-1
chr1_1 exon 10938605 10938679 10938605 ID=Msa0007660-mRNA-1:exon:4081;Parent=Msa0007660-mRNA-1
chr1_1 exon 10938755 10938812 10938755 ID=Msa0007660-mRNA-1:exon:4080;Parent=Msa0007660-mRNA-1
chr1_1 exon 10939013 10939070 10939013 ID=Msa0007660-mRNA-1:exon:4079;Parent=Msa0007660-mRNA-1
chr1_1 exon 10939182 10939249 10939182 ID=Msa0007660-mRNA-1:exon:4078;Parent=Msa0007660-mRNA-1
chr1_1 exon 10939697 10939776 10939697 ID=Msa0007660-mRNA-1:exon:4077;Parent=Msa0007660-mRNA-1
chr1_1 exon 10940825 10940888 10940825 ID=Msa0007660-mRNA-1:exon:4076;Parent=Msa0007660-mRNA-1
chr1_1 exon 10941301 10941372 10941301 ID=Msa0007660-mRNA-1:exon:4075;Parent=Msa0007660-mRNA-1
chr1_1 exon 10941547 10941606 10941547 ID=Msa0007660-mRNA-1:exon:4074;Parent=Msa0007660-mRNA-1
chr1_1 exon 10942181 10942235 10942181 ID=Msa0007660-mRNA-1:exon:4073;Parent=Msa0007660-mRNA-1
chr1_1 exon 10942353 10942386 10942353 ID=Msa0007660-mRNA-1:exon:4072;Parent=Msa0007660-mRNA-1
chr1_1 exon 10942878 10942964 10942878 ID=Msa0007660-mRNA-1:exon:4071;Parent=Msa0007660-mRNA-1
chr1_1 exon 10943357 10943428 10943357 ID=Msa0007660-mRNA-1:exon:4070;Parent=Msa0007660-mRNA-1
chr1_1 exon 10943534 10943746 10943534 ID=Msa0007660-mRNA-1:exon:4069;Parent=Msa0007660-mRNA-1
chr1_1 exon 10943870 10943997 10943870 ID=Msa0007660-mRNA-1:exon:4068;Parent=Msa0007660-mRNA-1
chr1_1 exon 10944112 10944216 10944112 ID=Msa0007660-mRNA-1:exon:4067;Parent=Msa0007660-mRNA-1
chr1_1 exon 10945203 10945257 10945203 ID=Msa0007660-mRNA-1:exon:4066;Parent=Msa0007660-mRNA-1
chr1_1 five_prime_UTR 10945203 10945257 10945203 ID=Msa0007660-mRNA-1:five_prime_utr;Parent=Msa0007660-mRNA-1
chr1_1 five_prime_UTR 10944212 10944216 10944212 ID=Msa0007660-mRNA-1:five_prime_utr;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10944112 10944211 10944112 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10943870 10943997 10943870 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10943534 10943746 10943534 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10943357 10943428 10943357 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10942878 10942964 10942878 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10942353 10942386 10942353 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10942181 10942235 10942181 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10941547 10941606 10941547 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10941301 10941372 10941301 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10940825 10940888 10940825 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10939697 10939776 10939697 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10939182 10939249 10939182 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10939013 10939070 10939013 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10938755 10938812 10938755 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10938605 10938679 10938605 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10937284 10937352 10937284 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10937013 10937102 10937013 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10936463 10936549 10936463 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10936118 10936233 10936118 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10935970 10936036 10935970 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10934621 10935661 10934621 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10934080 10934142 10934080 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10932973 10933096 10932973 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10932791 10932891 10932791 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10931677 10931739 10931677 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10931512 10931584 10931512 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 CDS 10929944 10930008 10929944 ID=Msa0007660-mRNA-1:cds;Parent=Msa0007660-mRNA-1
chr1_1 three_prime_UTR 10929843 10929943 10929843 ID=Msa0007660-mRNA-1:three_prime_utr;Parent=Msa0007660-mRNA-1
chr1_1 three_prime_UTR 10929469 10929815 10929469 ID=Msa0007660-mRNA-1:three_prime_utr;Parent=Msa0007660-mRNA-1
Gene Sequence

>Msa0007660

ATGGCGAGCAATGACAATTTAAAGAGATGGGTATCTGATAAGTTGATGTCACTGCTTGGATATTCTCAACCCACAATTGTACAGTACATCATTGGACTATCCAAGCAAGCTACTTCACCAGCTGATTTAGTGGGAAAGCTAGTGGAGTTTGGGTTCTCATCAACAGACACCCGTGCGTTTGTGGAAGAAATTTTCTCTAGAGTTCCTCGTAGATCGTCTGGCTTAAATCAATATCAAAAACAAGAGAGAGAAGCTGCAATGTTGGCAAGGAAACAGCGGACTTACACAATTTTGAAGGATGATGACTGTATCGATAATGACCATATTGTTAGTGGTGATGATAAATCATCGATAACTACTGCTTCTACATCTAGAAAGCCAGACAGTCATAAAAAACGTTTTAGGAAGAAAACTGAAGTTCAAGATGATCAAGAAGATGAGGTAAGTTCAAGGAAAGAAAGGGAAAGACAAGTTAAGAGAAGAATTACCCTTGATGAAGATAGTGGTTCAGAGTCAGAAGAAGAAAGATTGAAAGATCAAAGGGAAAAGGATGAATTAGTGCAGCATATGAGAGAAAGAGATGCTGCAGCGACACGGAAGTTGACTGAACAAAAATTAACACGAAAGGAAGAAGACGAAGCAATTCGAAGATCTAATGCTGCAGAACATGATGATATGTGCTGTTTGAGAAAGTATTCACGACAAGAATACTTGAAGAAAAGAGAGGAAAAGAAATTAGAAGAACTGAGAGATGATATAGAAGATGAGCAATATCTATTTGAAGGTGTGAAGCTTTCAGAAGTGGAACAGCGTGAGTTAAGGCACAAGAAAGAGCTATATGAACTTATAAAAAAGCGGTCAGAGCAGGCGGACAATGTAAATGAGTATAGAATGCCAGACACTTATGATAAGGAAGGCGGCGTTGATCAAGAAAAGAGGTTTTCTGTGGCTATGCAGCGTTACAGGGATTCAAATGCTGAGGAAAAGATGAATCCATTTTCTGAACAAGAGGCATGGGAGGAACATCAAATTGGAAAGGCAACACTGAAGTATGGCTCCAAAAATAAAAAGCAAGCCTCTGATGATTACCAGTTTGTGTTCGAGGACCAAATCGATTTTATCAAGGCATCGGTGATGGATGGAGATAAGTTTAATTACGATGAGATGGCAGATTCAATTGAAAAGTCCAAAGCAAAGTCGGCATCAGAGGCATTTGCAATTCAGGAGGAGAGAAAGAAATTACCCATTTATACTTATCGGGAGGAATTGCTCCAGGCTGTTCATGACCACCAGGTACTTGTAATTGTTGGTGAAACCGGTTCTGGAAAGACTACACAAATTCCCCAATATCTTCATGAAGCTGGCTACACAAAACATGGAATGATTGCATGTACTCAACCACGCCGTGTTGCTGCTATGAGTGTGGCTGCTCGAGTTGCTCACGAATTAGGTGTTAAACTAGGACACGAGGTTGGGTACTCCATCCGTTTTGAGGATTGCACATCAGACAAGACTATTTTGAAATATATGACCGATGGAATGTTACTGAGAGAATTTCTTGGTGAGCCTGATCTGGCAAGTTATAGTGTTGTGATGGTGGATGAGGCTCATGAAAGAACACTCTCAACTGATATTTTGTTTGCATTAGTAAAGGATATTTCTCGCCTCCGACCTGATCTCAAGTTGCTGATATCAAGTGCTACACTTGATGCAGAAAAGTTCAGTAATTACTTTGATTCTGCTCCAATATTTAAAATTCCAGGGAGAAGGTATCCGGTGGAAATACACTTCACCAAAGCACCAGAAGCTGACTACTTAGATGCAGCTATTGTCACGGCACTTCAAATCCATGTTACTCAATCTCCTGGAGATATATTGATATTCCTTACTGGTCAAGAAGAAATTGAAACGGCTGAAGAAATCTTGAAGCATCGAACTAGAGGCTTAGGGACTAAAATTGCCGAATTAATTATATGTCCTATATATGCCAACTTACCAACTGAACTACAAGCTAAAATATTTGAACCAACTCCTGAAGGGGCACGAAAGGTTGTCCTTGCTACCAATATTGCAGAAACATCATTGACAATTGATGGAATAAAATATGTCATTGATCCAGGATTCGTTAAGATGAAAAGTTATAATCCAAAGACAGGAATGGAGTCTTTACTAGTGACTCCCATCTCAAAAGCCTCAGCAATGCAACGAGCTGGTCGTTCTGGAAGAACAGGTCCGGGAAAATGCTTCCGGTTGTATACTGCATACAATTTTCAAAATGATTTGGATGATAACACCGTTCCTGAAATACAACGGACTAATCTCGCAAATGTAGTTTTGACCTTAAAATGTCTTGGTATTGATGACTTGTTGCACTTTGAATTTATGGATCCTCCACCTACTGAGGCCTTATTGAAAGCCCTGGAGCTTCTATTTGCTTTAAATGCTTTAAATAAGCATGGTCAGTTAACCAAGGTAGGTAGACGGATGGCAGAGTTCCCACTTGATCCTATGTTGTCAAAAATGATAGTGGTTTCAGAAAAGTACAAGTGTTCAGATGACATCATTTCCATTGCTGCTATGCTTTCTATTGGAAACTCAATATTTTACCGTCCAAAGGATAAACAAGTGCATGCAGACAATGCAAGACTGAATTTTCACTCTGGAAATGTTGGAGACCATATTGCATTGCTAAAGGTTTACAATTCTTGGAAGGAGACCAATTATTCAACACAATGGTGTTATGAAAATTATATACAGGTAAGAAGTATGAAACAGGCGAGAGATATCCGTGATCAACTCGCAGGTCTATTAGAGAGGGTTGAGATCGAGCTTACTACAAATACTAATGATTCAGATGCCATCAAGAAATCTATAGCATCTGGATTTTTTCCACACACTGCAAAATTGCACAAAAACGGATCATATCGGACACTTAAACATGCACAGACTGTTGACATACACCCTAGTTCGGGGCTGGCACAGGTTCGTCCAAGATGCGTTGTGTACCATGAACTAGTGCTCACAACCAAGGAATATATGAGACAGATCACGGAGTTAAAGTCACAGTGGTTGTTGGAGATAGCCCCTCACTATTACCAGCCCAATGATCTTGAAGACACTATCTCAAAGAAAATGCCCCGTGGAGAAGGACGTGCAGAGAACCGCAGGAAGTACATTCGTTAG
Protein sequence

>Msa0007660

MASNDNLKRWVSDKLMSLLGYSQPTIVQYIIGLSKQATSPADLVGKLVEFGFSSTDTRAFVEEIFSRVPRRSSGLNQYQKQEREAAMLARKQRTYTILKDDDCIDNDHIVSGDDKSSITTASTSRKPDSHKKRFRKKTEVQDDQEDEVSSRKERERQVKRRITLDEDSGSESEEERLKDQREKDELVQHMRERDAAATRKLTEQKLTRKEEDEAIRRSNAAEHDDMCCLRKYSRQEYLKKREEKKLEELRDDIEDEQYLFEGVKLSEVEQRELRHKKELYELIKKRSEQADNVNEYRMPDTYDKEGGVDQEKRFSVAMQRYRDSNAEEKMNPFSEQEAWEEHQIGKATLKYGSKNKKQASDDYQFVFEDQIDFIKASVMDGDKFNYDEMADSIEKSKAKSASEAFAIQEERKKLPIYTYREELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTKHGMIACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFALVKDISRLRPDLKLLISSATLDAEKFSNYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTQSPGDILIFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVTPISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLANVVLTLKCLGIDDLLHFEFMDPPPTEALLKALELLFALNALNKHGQLTKVGRRMAEFPLDPMLSKMIVVSEKYKCSDDIISIAAMLSIGNSIFYRPKDKQVHADNARLNFHSGNVGDHIALLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTTNTNDSDAIKKSIASGFFPHTAKLHKNGSYRTLKHAQTVDIHPSSGLAQVRPRCVVYHELVLTTKEYMRQITELKSQWLLEIAPHYYQPNDLEDTISKKMPRGEGRAENRRKYIR*