Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057220 | XP_003588561.1 | 98.425 | 127 | 2 | 0 | 1 | 127 | 1 | 127 | 2.23e-86 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057220 | sp|Q9LYE3|ASI1_ARATH | 50.435 | 115 | 50 | 3 | 20 | 127 | 7 | 121 | 3.88e-18 | 84.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057220 | G7I4E4 | 98.425 | 127 | 2 | 0 | 1 | 127 | 1 | 127 | 1.07e-86 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0057220 | Msa1322490 | 0.804377 | 2.224676e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057220 | MtrunA17_Chr1g0147351 | 98.425 | 127 | 2 | 0 | 1 | 127 | 1 | 127 | 2.05e-90 | 261 |
| Msa0057220 | MtrunA17_Chr1g0147371 | 62.016 | 129 | 44 | 2 | 4 | 127 | 48 | 176 | 1.49e-39 | 135 |
| Msa0057220 | MtrunA17_Chr3g0139421 | 51.429 | 105 | 50 | 1 | 24 | 127 | 11 | 115 | 2.98e-28 | 109 |
| Msa0057220 | MtrunA17_Chr2g0309201 | 47.619 | 105 | 53 | 2 | 24 | 127 | 20 | 123 | 4.07e-22 | 92.0 |
| Msa0057220 | MtrunA17_Chr2g0332361 | 43.810 | 105 | 57 | 2 | 24 | 127 | 17 | 120 | 1.72e-20 | 87.0 |
| Msa0057220 | MtrunA17_Chr2g0332341 | 43.810 | 105 | 57 | 2 | 24 | 127 | 17 | 120 | 2.88e-20 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057220 | AT5G11470.2 | 50.435 | 115 | 50 | 3 | 20 | 127 | 7 | 121 | 3.94e-19 | 84.0 |
| Msa0057220 | AT5G11470.1 | 50.435 | 115 | 50 | 3 | 20 | 127 | 7 | 121 | 5.01e-19 | 83.6 |
Find 51 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAATTTAAATATGAAATT+TGG | 0.172610 | 1_2:-13152413 | Msa0057220:three_prime_UTR |
| TTTGGCCCCATTTGAATTCT+AGG | 0.183362 | 1_2:+13154450 | None:intergenic |
| TAAGAACATATTTAACAAAT+TGG | 0.185456 | 1_2:-13152645 | Msa0057220:CDS |
| AATTCTAGGGTTTCTGATTC+TGG | 0.193640 | 1_2:+13154464 | None:intergenic |
| TGCAATGTTTAATTGAAATT+TGG | 0.234652 | 1_2:-13152447 | Msa0057220:three_prime_UTR |
| TTTATACAAGAAAGGAGTTT+GGG | 0.307211 | 1_2:-13152587 | Msa0057220:CDS |
| TACTCTTGAAAGGAAGATTA+AGG | 0.315143 | 1_2:-13154276 | Msa0057220:CDS |
| ATTTATACAAGAAAGGAGTT+TGG | 0.323611 | 1_2:-13152588 | Msa0057220:CDS |
| AAGAACATATTTAACAAATT+GGG | 0.373166 | 1_2:-13152644 | Msa0057220:CDS |
| CAGAAACCCTAGAATTCAAA+TGG | 0.387343 | 1_2:-13154457 | Msa0057220:CDS |
| TTTGCTTGTGGTGATGGTGA+TGG | 0.412379 | 1_2:-13154179 | Msa0057220:CDS |
| TTGTTCTTTGCTTGTGGTGA+TGG | 0.413222 | 1_2:-13154185 | Msa0057220:CDS |
| AAAGGAAGATTAAGGTTCAA+TGG | 0.418984 | 1_2:-13154268 | Msa0057220:CDS |
| TCTGATTCTGGTGAGGGAGC+AGG | 0.421321 | 1_2:+13154476 | None:intergenic |
| AAATATTATTTATACAAGAA+AGG | 0.448571 | 1_2:-13152595 | Msa0057220:CDS |
| AGGGTTTCTGATTCTGGTGA+GGG | 0.458949 | 1_2:+13154470 | None:intergenic |
| TTGGCCCCATTTGAATTCTA+GGG | 0.463238 | 1_2:+13154451 | None:intergenic |
| ATGCCAGTCTCAACCATCTC+AGG | 0.469386 | 1_2:-13154608 | Msa0057220:intron |
| TGGGGCCAAAAGCGAGGAAA+AGG | 0.471610 | 1_2:-13154437 | Msa0057220:CDS |
| CAAACACTTCGAAACCTCAC+TGG | 0.471612 | 1_2:+13154235 | None:intergenic |
| TTAATCTTCCTTTCAAGAGT+AGG | 0.485674 | 1_2:+13154278 | None:intergenic |
| GAGACTGGCATGGTTGTAGA+TGG | 0.485982 | 1_2:+13154620 | None:intergenic |
| AATGAATTGTTCTTTGCTTG+TGG | 0.501028 | 1_2:-13154191 | Msa0057220:CDS |
| AAACTAGATGGCAAATATGT+TGG | 0.507067 | 1_2:-13152492 | Msa0057220:three_prime_UTR |
| ACTTGCTACTATTCATCCTC+TGG | 0.510958 | 1_2:-13154156 | Msa0057220:intron |
| AGAAACCCTAGAATTCAAAT+GGG | 0.511777 | 1_2:-13154456 | Msa0057220:CDS |
| GTCTGAGAATTTATATTCAG+TGG | 0.518702 | 1_2:+13154699 | None:intergenic |
| TAGGGTTTCTGATTCTGGTG+AGG | 0.526540 | 1_2:+13154469 | None:intergenic |
| CACCACGTAAGGTGAATGAT+TGG | 0.527411 | 1_2:+13154387 | None:intergenic |
| CGAGTAATCAACACCACGTA+AGG | 0.529489 | 1_2:+13154376 | None:intergenic |
| GGGAAACTCCTACTCTTGAA+AGG | 0.530988 | 1_2:-13154286 | Msa0057220:CDS |
| ACGCATGCCGTGAACTTCAC+CGG | 0.547779 | 1_2:-13154669 | Msa0057220:five_prime_UTR |
| GCAGCTACCGGTGAAGTTCA+CGG | 0.549627 | 1_2:+13154662 | None:intergenic |
| GTGTTTGCATTTACCTGAGA+TGG | 0.552364 | 1_2:+13154595 | None:intergenic |
| TTACCTGAGATGGTTGAGAC+TGG | 0.568486 | 1_2:+13154605 | None:intergenic |
| AGGTTTCGAAGTGTTTGACT+TGG | 0.571490 | 1_2:-13154229 | Msa0057220:CDS |
| AAACACTTCGAAACCTCACT+GGG | 0.591437 | 1_2:+13154236 | None:intergenic |
| TACCAATCATTCACCTTACG+TGG | 0.591871 | 1_2:-13154389 | Msa0057220:CDS |
| GTTCACGGCATGCGTTGTGA+TGG | 0.599828 | 1_2:+13154677 | None:intergenic |
| TTCAAATGGGGCCAAAAGCG+AGG | 0.608294 | 1_2:-13154443 | Msa0057220:CDS |
| TTATACAAGAAAGGAGTTTG+GGG | 0.608754 | 1_2:-13152586 | Msa0057220:CDS |
| TGAGAATTTATATTCAGTGG+AGG | 0.615172 | 1_2:+13154702 | None:intergenic |
| GATTCTGGTGAGGGAGCAGG+AGG | 0.615714 | 1_2:+13154479 | None:intergenic |
| AGAAGAATGATAGCAGCTAC+CGG | 0.617279 | 1_2:+13154650 | None:intergenic |
| AAGTTGTGAAGTCACTGAAG+TGG | 0.635735 | 1_2:-13152551 | Msa0057220:CDS |
| GGCCAAAAGCGAGGAAAAGG+CGG | 0.656548 | 1_2:-13154434 | Msa0057220:CDS |
| GCATGGTTGTAGATGGTGGT+CGG | 0.656595 | 1_2:+13154627 | None:intergenic |
| ATGGTTCTTTCGTCCCAGTG+AGG | 0.667590 | 1_2:-13154249 | Msa0057220:CDS |
| ACTGGCATGGTTGTAGATGG+TGG | 0.674407 | 1_2:+13154623 | None:intergenic |
| GAAACCCTAGAATTCAAATG+GGG | 0.711620 | 1_2:-13154455 | Msa0057220:CDS |
| TGAGATGGTTGAGACTGGCA+TGG | 0.715779 | 1_2:+13154610 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATTTATACAAGAA+AGG | - | chr1_2:13154516-13154535 | Msa0057220:intron | 10.0% |
| !! | AAATATTATTTATACAAGAA+AGG | - | chr1_2:13154516-13154535 | Msa0057220:intron | 10.0% |
| !! | ACACAAAAAATAGAATAAAA+GGG | + | chr1_2:13152988-13153007 | None:intergenic | 15.0% |
| !! | TACACAAAAAATAGAATAAA+AGG | + | chr1_2:13152989-13153008 | None:intergenic | 15.0% |
| !! | ATAATTGACTAAAATTTACA+TGG | + | chr1_2:13153964-13153983 | None:intergenic | 15.0% |
| !!! | GTAAATTTTAGTCAATTATA+TGG | - | chr1_2:13153965-13153984 | Msa0057220:intron | 15.0% |
| !! | TTAAATTGTTGAAAATCTTA+TGG | - | chr1_2:13154417-13154436 | Msa0057220:CDS | 15.0% |
| !! | TAAGAACATATTTAACAAAT+TGG | - | chr1_2:13154466-13154485 | Msa0057220:CDS | 15.0% |
| !! | AAGAACATATTTAACAAATT+GGG | - | chr1_2:13154467-13154486 | Msa0057220:CDS | 15.0% |
| !! | ACACAAAAAATAGAATAAAA+GGG | + | chr1_2:13152988-13153007 | None:intergenic | 15.0% |
| !! | TACACAAAAAATAGAATAAA+AGG | + | chr1_2:13152989-13153008 | None:intergenic | 15.0% |
| !! | ATAATTGACTAAAATTTACA+TGG | + | chr1_2:13153964-13153983 | None:intergenic | 15.0% |
| !!! | GTAAATTTTAGTCAATTATA+TGG | - | chr1_2:13153965-13153984 | Msa0057220:intron | 15.0% |
| !! | TTAAATTGTTGAAAATCTTA+TGG | - | chr1_2:13154417-13154436 | Msa0057220:CDS | 15.0% |
| !! | TAAGAACATATTTAACAAAT+TGG | - | chr1_2:13154466-13154485 | Msa0057220:CDS | 15.0% |
| !! | AAGAACATATTTAACAAATT+GGG | - | chr1_2:13154467-13154486 | Msa0057220:CDS | 15.0% |
| !! | TATGGTAAATAAAATTCATG+TGG | - | chr1_2:13153345-13153364 | Msa0057220:intron | 20.0% |
| !! | TAGAGTAAGTAAAATTTATG+TGG | - | chr1_2:13153659-13153678 | Msa0057220:intron | 20.0% |
| !! | AGAGTAAGTAAAATTTATGT+GGG | - | chr1_2:13153660-13153679 | Msa0057220:intron | 20.0% |
| !! | TAATAAATTTCACTAACTGA+AGG | + | chr1_2:13153731-13153750 | None:intergenic | 20.0% |
| !! | AAATTATATCTACCTTACAT+AGG | + | chr1_2:13153864-13153883 | None:intergenic | 20.0% |
| !! | GTAAGGTAGATATAATTTAT+CGG | - | chr1_2:13153866-13153885 | Msa0057220:intron | 20.0% |
| !! | TAAGGTAGATATAATTTATC+GGG | - | chr1_2:13153867-13153886 | Msa0057220:intron | 20.0% |
| !! | TTAATTAGGTTACAAATTGA+TGG | + | chr1_2:13154141-13154160 | None:intergenic | 20.0% |
| !! | AATTTGTAACCTAATTAACA+TGG | - | chr1_2:13154143-13154162 | Msa0057220:intron | 20.0% |
| !! | TGCAATGTTTAATTGAAATT+TGG | - | chr1_2:13154664-13154683 | Msa0057220:five_prime_UTR | 20.0% |
| !! | TATGGTAAATAAAATTCATG+TGG | - | chr1_2:13153345-13153364 | Msa0057220:intron | 20.0% |
| !! | TAGAGTAAGTAAAATTTATG+TGG | - | chr1_2:13153659-13153678 | Msa0057220:intron | 20.0% |
| !! | AGAGTAAGTAAAATTTATGT+GGG | - | chr1_2:13153660-13153679 | Msa0057220:intron | 20.0% |
| !! | TAATAAATTTCACTAACTGA+AGG | + | chr1_2:13153731-13153750 | None:intergenic | 20.0% |
| !! | AAATTATATCTACCTTACAT+AGG | + | chr1_2:13153864-13153883 | None:intergenic | 20.0% |
| !! | GTAAGGTAGATATAATTTAT+CGG | - | chr1_2:13153866-13153885 | Msa0057220:intron | 20.0% |
| !! | TAAGGTAGATATAATTTATC+GGG | - | chr1_2:13153867-13153886 | Msa0057220:intron | 20.0% |
| !! | TTAATTAGGTTACAAATTGA+TGG | + | chr1_2:13154141-13154160 | None:intergenic | 20.0% |
| !! | AATTTGTAACCTAATTAACA+TGG | - | chr1_2:13154143-13154162 | Msa0057220:intron | 20.0% |
| !! | TGCAATGTTTAATTGAAATT+TGG | - | chr1_2:13154664-13154683 | Msa0057220:five_prime_UTR | 20.0% |
| ! | TTGGAAAAATCATCAAGATT+TGG | - | chr1_2:13152804-13152823 | Msa0057220:intron | 25.0% |
| ! | TGGAAAAATCATCAAGATTT+GGG | - | chr1_2:13152805-13152824 | Msa0057220:intron | 25.0% |
| ! | AAAAATAAGTCAATCCAAAC+AGG | + | chr1_2:13153085-13153104 | None:intergenic | 25.0% |
| ! | ACTATATCACTGTTATTAAG+TGG | - | chr1_2:13153552-13153571 | Msa0057220:intron | 25.0% |
| !!! | CAATTATAAGTGAAAGTGTT+GGG | - | chr1_2:13153605-13153624 | Msa0057220:intron | 25.0% |
| !! | AAATTTTACTTACTCTACGA+AGG | + | chr1_2:13153656-13153675 | None:intergenic | 25.0% |
| ! | AAGGTAGATATAATTTATCG+GGG | - | chr1_2:13153868-13153887 | Msa0057220:intron | 25.0% |
| !! | AATTAGATCATGTCATTTAG+TGG | - | chr1_2:13153920-13153939 | Msa0057220:intron | 25.0% |
| ! | CAAAAATAGCCATGTTAATT+AGG | + | chr1_2:13154155-13154174 | None:intergenic | 25.0% |
| !!! | TTAACATGGCTATTTTTGTA+TGG | - | chr1_2:13154157-13154176 | Msa0057220:CDS | 25.0% |
| ! | ATTTATACAAGAAAGGAGTT+TGG | - | chr1_2:13154523-13154542 | Msa0057220:intron | 25.0% |
| ! | TTTATACAAGAAAGGAGTTT+GGG | - | chr1_2:13154524-13154543 | Msa0057220:intron | 25.0% |
| ! | TCTGAGAATTTATATTCAGT+GGG | + | chr1_2:13152414-13152433 | None:intergenic | 25.0% |
| ! | TTGGAAAAATCATCAAGATT+TGG | - | chr1_2:13152804-13152823 | Msa0057220:intron | 25.0% |
| ! | TGGAAAAATCATCAAGATTT+GGG | - | chr1_2:13152805-13152824 | Msa0057220:intron | 25.0% |
| ! | AAAAATAAGTCAATCCAAAC+AGG | + | chr1_2:13153085-13153104 | None:intergenic | 25.0% |
| ! | ACTATATCACTGTTATTAAG+TGG | - | chr1_2:13153552-13153571 | Msa0057220:intron | 25.0% |
| !!! | CAATTATAAGTGAAAGTGTT+GGG | - | chr1_2:13153605-13153624 | Msa0057220:intron | 25.0% |
| !! | AAATTTTACTTACTCTACGA+AGG | + | chr1_2:13153656-13153675 | None:intergenic | 25.0% |
| ! | AAGGTAGATATAATTTATCG+GGG | - | chr1_2:13153868-13153887 | Msa0057220:intron | 25.0% |
| !! | AATTAGATCATGTCATTTAG+TGG | - | chr1_2:13153920-13153939 | Msa0057220:intron | 25.0% |
| ! | CAAAAATAGCCATGTTAATT+AGG | + | chr1_2:13154155-13154174 | None:intergenic | 25.0% |
| !!! | TTAACATGGCTATTTTTGTA+TGG | - | chr1_2:13154157-13154176 | Msa0057220:CDS | 25.0% |
| ! | ATTTATACAAGAAAGGAGTT+TGG | - | chr1_2:13154523-13154542 | Msa0057220:intron | 25.0% |
| ! | TTTATACAAGAAAGGAGTTT+GGG | - | chr1_2:13154524-13154543 | Msa0057220:intron | 25.0% |
| GTCTGAGAATTTATATTCAG+TGG | + | chr1_2:13152415-13152434 | None:intergenic | 30.0% | |
| GAGAGCTATATCAAAATCAT+TGG | + | chr1_2:13152565-13152584 | None:intergenic | 30.0% | |
| AGAAACCCTAGAATTCAAAT+GGG | - | chr1_2:13152655-13152674 | Msa0057220:intron | 30.0% | |
| !! | TTGATGATTTTTCCAATACG+AGG | + | chr1_2:13152800-13152819 | None:intergenic | 30.0% |
| TTAATCTTCCTTTCAAGAGT+AGG | + | chr1_2:13152836-13152855 | None:intergenic | 30.0% | |
| TACTCTTGAAAGGAAGATTA+AGG | - | chr1_2:13152835-13152854 | Msa0057220:intron | 30.0% | |
| AAAGGAAGATTAAGGTTCAA+TGG | - | chr1_2:13152843-13152862 | Msa0057220:intron | 30.0% | |
| AATGAATTGTTCTTTGCTTG+TGG | - | chr1_2:13152920-13152939 | Msa0057220:intron | 30.0% | |
| ! | TTTTTCCCAAGCTCAAAAAA+GGG | + | chr1_2:13153200-13153219 | None:intergenic | 30.0% |
| ! | ATTTTTCCCAAGCTCAAAAA+AGG | + | chr1_2:13153201-13153220 | None:intergenic | 30.0% |
| AATAAGTCAGTCAATCCAAA+CGG | - | chr1_2:13153230-13153249 | Msa0057220:intron | 30.0% | |
| ! | AAGTTATATAGTGAGAGTGT+TGG | - | chr1_2:13153283-13153302 | Msa0057220:intron | 30.0% |
| TGTATCTAATACGTATCTAG+TGG | + | chr1_2:13153393-13153412 | None:intergenic | 30.0% | |
| AGATACGTATTAGATACACA+CGG | - | chr1_2:13153395-13153414 | Msa0057220:intron | 30.0% | |
| GACAATCATTTCAAAGTAGT+GGG | + | chr1_2:13153520-13153539 | None:intergenic | 30.0% | |
| TGACAATCATTTCAAAGTAG+TGG | + | chr1_2:13153521-13153540 | None:intergenic | 30.0% | |
| ! | GCAATTATAAGTGAAAGTGT+TGG | - | chr1_2:13153604-13153623 | Msa0057220:intron | 30.0% |
| ACTTGCTCAAAATGAAGAAT+TGG | + | chr1_2:13154090-13154109 | None:intergenic | 30.0% | |
| ! | GCAAGTTATTCAATTTTGCT+TGG | - | chr1_2:13154104-13154123 | Msa0057220:intron | 30.0% |
| ! | TTATTCAATTTTGCTTGGCT+TGG | - | chr1_2:13154109-13154128 | Msa0057220:intron | 30.0% |
| !!! | CTATTTTTGTATGGCATATC+AGG | - | chr1_2:13154166-13154185 | Msa0057220:CDS | 30.0% |
| AAGTAACGATAGAACACAAA+GGG | + | chr1_2:13154278-13154297 | None:intergenic | 30.0% | |
| AAAGTAACGATAGAACACAA+AGG | + | chr1_2:13154279-13154298 | None:intergenic | 30.0% | |
| ! | TTCTATCGTTACTTTGATGT+TGG | - | chr1_2:13154284-13154303 | Msa0057220:CDS | 30.0% |
| ! | TCTATCGTTACTTTGATGTT+GGG | - | chr1_2:13154285-13154304 | Msa0057220:CDS | 30.0% |
| TCTAACATATTCAAACACAC+TGG | + | chr1_2:13154380-13154399 | None:intergenic | 30.0% | |
| GTGTTTGAATATGTTAGACT+AGG | - | chr1_2:13154382-13154401 | Msa0057220:CDS | 30.0% | |
| TTATACAAGAAAGGAGTTTG+GGG | - | chr1_2:13154525-13154544 | Msa0057220:intron | 30.0% | |
| GCCTGTAATTAAAAACTAGA+TGG | - | chr1_2:13154607-13154626 | Msa0057220:intron | 30.0% | |
| !!! | GCCATCTAGTTTTTAATTAC+AGG | + | chr1_2:13154611-13154630 | None:intergenic | 30.0% |
| AAACTAGATGGCAAATATGT+TGG | - | chr1_2:13154619-13154638 | Msa0057220:exon | 30.0% | |
| GTCTGAGAATTTATATTCAG+TGG | + | chr1_2:13152415-13152434 | None:intergenic | 30.0% | |
| GAGAGCTATATCAAAATCAT+TGG | + | chr1_2:13152565-13152584 | None:intergenic | 30.0% | |
| AGAAACCCTAGAATTCAAAT+GGG | - | chr1_2:13152655-13152674 | Msa0057220:intron | 30.0% | |
| !! | TTGATGATTTTTCCAATACG+AGG | + | chr1_2:13152800-13152819 | None:intergenic | 30.0% |
| TTAATCTTCCTTTCAAGAGT+AGG | + | chr1_2:13152836-13152855 | None:intergenic | 30.0% | |
| TACTCTTGAAAGGAAGATTA+AGG | - | chr1_2:13152835-13152854 | Msa0057220:intron | 30.0% | |
| AAAGGAAGATTAAGGTTCAA+TGG | - | chr1_2:13152843-13152862 | Msa0057220:intron | 30.0% | |
| AATGAATTGTTCTTTGCTTG+TGG | - | chr1_2:13152920-13152939 | Msa0057220:intron | 30.0% | |
| ! | TTTTTCCCAAGCTCAAAAAA+GGG | + | chr1_2:13153200-13153219 | None:intergenic | 30.0% |
| ! | ATTTTTCCCAAGCTCAAAAA+AGG | + | chr1_2:13153201-13153220 | None:intergenic | 30.0% |
| AATAAGTCAGTCAATCCAAA+CGG | - | chr1_2:13153230-13153249 | Msa0057220:intron | 30.0% | |
| ! | AAGTTATATAGTGAGAGTGT+TGG | - | chr1_2:13153283-13153302 | Msa0057220:intron | 30.0% |
| TGTATCTAATACGTATCTAG+TGG | + | chr1_2:13153393-13153412 | None:intergenic | 30.0% | |
| AGATACGTATTAGATACACA+CGG | - | chr1_2:13153395-13153414 | Msa0057220:intron | 30.0% | |
| GACAATCATTTCAAAGTAGT+GGG | + | chr1_2:13153520-13153539 | None:intergenic | 30.0% | |
| TGACAATCATTTCAAAGTAG+TGG | + | chr1_2:13153521-13153540 | None:intergenic | 30.0% | |
| ! | GCAATTATAAGTGAAAGTGT+TGG | - | chr1_2:13153604-13153623 | Msa0057220:intron | 30.0% |
| ACTTGCTCAAAATGAAGAAT+TGG | + | chr1_2:13154090-13154109 | None:intergenic | 30.0% | |
| ! | GCAAGTTATTCAATTTTGCT+TGG | - | chr1_2:13154104-13154123 | Msa0057220:intron | 30.0% |
| ! | TTATTCAATTTTGCTTGGCT+TGG | - | chr1_2:13154109-13154128 | Msa0057220:intron | 30.0% |
| !!! | CTATTTTTGTATGGCATATC+AGG | - | chr1_2:13154166-13154185 | Msa0057220:CDS | 30.0% |
| AAGTAACGATAGAACACAAA+GGG | + | chr1_2:13154278-13154297 | None:intergenic | 30.0% | |
| AAAGTAACGATAGAACACAA+AGG | + | chr1_2:13154279-13154298 | None:intergenic | 30.0% | |
| ! | TTCTATCGTTACTTTGATGT+TGG | - | chr1_2:13154284-13154303 | Msa0057220:CDS | 30.0% |
| ! | TCTATCGTTACTTTGATGTT+GGG | - | chr1_2:13154285-13154304 | Msa0057220:CDS | 30.0% |
| TCTAACATATTCAAACACAC+TGG | + | chr1_2:13154380-13154399 | None:intergenic | 30.0% | |
| GTGTTTGAATATGTTAGACT+AGG | - | chr1_2:13154382-13154401 | Msa0057220:CDS | 30.0% | |
| TTATACAAGAAAGGAGTTTG+GGG | - | chr1_2:13154525-13154544 | Msa0057220:intron | 30.0% | |
| GCCTGTAATTAAAAACTAGA+TGG | - | chr1_2:13154607-13154626 | Msa0057220:intron | 30.0% | |
| !!! | GCCATCTAGTTTTTAATTAC+AGG | + | chr1_2:13154611-13154630 | None:intergenic | 30.0% |
| AAACTAGATGGCAAATATGT+TGG | - | chr1_2:13154619-13154638 | Msa0057220:exon | 30.0% | |
| !! | AATTCTAGGGTTTCTGATTC+TGG | + | chr1_2:13152650-13152669 | None:intergenic | 35.0% |
| CAGAAACCCTAGAATTCAAA+TGG | - | chr1_2:13152654-13152673 | Msa0057220:intron | 35.0% | |
| GAAACCCTAGAATTCAAATG+GGG | - | chr1_2:13152656-13152675 | Msa0057220:intron | 35.0% | |
| ATAAAAGGGTGAATTACCAG+AGG | + | chr1_2:13152974-13152993 | None:intergenic | 35.0% | |
| ! | AATGCAATTTTCAGCCTGTT+TGG | - | chr1_2:13153068-13153087 | Msa0057220:intron | 35.0% |
| ATAAGTCAGTCAATCCAAAC+GGG | - | chr1_2:13153231-13153250 | Msa0057220:intron | 35.0% | |
| ATACACATAGACTCCACTAA+TGG | + | chr1_2:13153257-13153276 | None:intergenic | 35.0% | |
| !! | TATATAGTGAGAGTGTTGGA+AGG | - | chr1_2:13153287-13153306 | Msa0057220:intron | 35.0% |
| !! | GTTGATAGCATTCATCTGTA+TGG | - | chr1_2:13153327-13153346 | Msa0057220:intron | 35.0% |
| TAGTGGCACTCATTTCAAAA+TGG | + | chr1_2:13153376-13153395 | None:intergenic | 35.0% | |
| ATTAGATACACACGGTTTAG+TGG | - | chr1_2:13153403-13153422 | Msa0057220:intron | 35.0% | |
| GAAATGATTGTCACTACACA+AGG | - | chr1_2:13153528-13153547 | Msa0057220:intron | 35.0% | |
| ATGTTGCTAACATTCCTTGT+TGG | - | chr1_2:13153779-13153798 | Msa0057220:intron | 35.0% | |
| GAGATCAACATTACAAAGTG+AGG | + | chr1_2:13153817-13153836 | None:intergenic | 35.0% | |
| ! | AGATCATGTCATTTAGTGGA+TGG | - | chr1_2:13153924-13153943 | Msa0057220:intron | 35.0% |
| CAATTATATGGTGAGAGAGT+TGG | - | chr1_2:13153977-13153996 | Msa0057220:intron | 35.0% | |
| CAACGTTGTTTGCATTTCTA+AGG | - | chr1_2:13154208-13154227 | Msa0057220:CDS | 35.0% | |
| ! | TTTGCATTTCTAAGGACTCT+AGG | - | chr1_2:13154216-13154235 | Msa0057220:CDS | 35.0% |
| AGCTATCAGATAAAGCCATT+TGG | - | chr1_2:13154246-13154265 | Msa0057220:CDS | 35.0% | |
| ! | TATCGGAATTGAAGGTATGT+GGG | - | chr1_2:13154343-13154362 | Msa0057220:CDS | 35.0% |
| ! | AGTGACTTCACAACTTTTCA+AGG | + | chr1_2:13154556-13154575 | None:intergenic | 35.0% |
| !! | AATTCTAGGGTTTCTGATTC+TGG | + | chr1_2:13152650-13152669 | None:intergenic | 35.0% |
| CAGAAACCCTAGAATTCAAA+TGG | - | chr1_2:13152654-13152673 | Msa0057220:intron | 35.0% | |
| GAAACCCTAGAATTCAAATG+GGG | - | chr1_2:13152656-13152675 | Msa0057220:intron | 35.0% | |
| ATAAAAGGGTGAATTACCAG+AGG | + | chr1_2:13152974-13152993 | None:intergenic | 35.0% | |
| ! | AATGCAATTTTCAGCCTGTT+TGG | - | chr1_2:13153068-13153087 | Msa0057220:intron | 35.0% |
| ATAAGTCAGTCAATCCAAAC+GGG | - | chr1_2:13153231-13153250 | Msa0057220:intron | 35.0% | |
| ATACACATAGACTCCACTAA+TGG | + | chr1_2:13153257-13153276 | None:intergenic | 35.0% | |
| !! | TATATAGTGAGAGTGTTGGA+AGG | - | chr1_2:13153287-13153306 | Msa0057220:intron | 35.0% |
| !! | GTTGATAGCATTCATCTGTA+TGG | - | chr1_2:13153327-13153346 | Msa0057220:intron | 35.0% |
| TAGTGGCACTCATTTCAAAA+TGG | + | chr1_2:13153376-13153395 | None:intergenic | 35.0% | |
| ATTAGATACACACGGTTTAG+TGG | - | chr1_2:13153403-13153422 | Msa0057220:intron | 35.0% | |
| GAAATGATTGTCACTACACA+AGG | - | chr1_2:13153528-13153547 | Msa0057220:intron | 35.0% | |
| ATGTTGCTAACATTCCTTGT+TGG | - | chr1_2:13153779-13153798 | Msa0057220:intron | 35.0% | |
| GAGATCAACATTACAAAGTG+AGG | + | chr1_2:13153817-13153836 | None:intergenic | 35.0% | |
| ! | AGATCATGTCATTTAGTGGA+TGG | - | chr1_2:13153924-13153943 | Msa0057220:intron | 35.0% |
| CAATTATATGGTGAGAGAGT+TGG | - | chr1_2:13153977-13153996 | Msa0057220:intron | 35.0% | |
| CAACGTTGTTTGCATTTCTA+AGG | - | chr1_2:13154208-13154227 | Msa0057220:CDS | 35.0% | |
| ! | TTTGCATTTCTAAGGACTCT+AGG | - | chr1_2:13154216-13154235 | Msa0057220:CDS | 35.0% |
| AGCTATCAGATAAAGCCATT+TGG | - | chr1_2:13154246-13154265 | Msa0057220:CDS | 35.0% | |
| ! | TATCGGAATTGAAGGTATGT+GGG | - | chr1_2:13154343-13154362 | Msa0057220:CDS | 35.0% |
| ! | AGTGACTTCACAACTTTTCA+AGG | + | chr1_2:13154556-13154575 | None:intergenic | 35.0% |
| AGAAGAATGATAGCAGCTAC+CGG | + | chr1_2:13152464-13152483 | None:intergenic | 40.0% | |
| GTGTTTGCATTTACCTGAGA+TGG | + | chr1_2:13152519-13152538 | None:intergenic | 40.0% | |
| TTGGCCCCATTTGAATTCTA+GGG | + | chr1_2:13152663-13152682 | None:intergenic | 40.0% | |
| TTTGGCCCCATTTGAATTCT+AGG | + | chr1_2:13152664-13152683 | None:intergenic | 40.0% | |
| TACCAATCATTCACCTTACG+TGG | - | chr1_2:13152722-13152741 | Msa0057220:intron | 40.0% | |
| ! | GATTTTGCTGAACCTCGTAT+TGG | - | chr1_2:13152785-13152804 | Msa0057220:intron | 40.0% |
| AAACACTTCGAAACCTCACT+GGG | + | chr1_2:13152878-13152897 | None:intergenic | 40.0% | |
| ! | AGGTTTCGAAGTGTTTGACT+TGG | - | chr1_2:13152882-13152901 | Msa0057220:intron | 40.0% |
| TTGTTCTTTGCTTGTGGTGA+TGG | - | chr1_2:13152926-13152945 | Msa0057220:intron | 40.0% | |
| ! | ACTTGCTACTATTCATCCTC+TGG | - | chr1_2:13152955-13152974 | Msa0057220:intron | 40.0% |
| !!! | TTAGAGCCCTTTTTTGAGCT+TGG | - | chr1_2:13153191-13153210 | Msa0057220:intron | 40.0% |
| !!! | TAGAGCCCTTTTTTGAGCTT+GGG | - | chr1_2:13153192-13153211 | Msa0057220:intron | 40.0% |
| GGCACTCATTTCAAAATGGT+AGG | + | chr1_2:13153372-13153391 | None:intergenic | 40.0% | |
| !! | AAGTAGTGGGTCAACATGAA+CGG | + | chr1_2:13153507-13153526 | None:intergenic | 40.0% |
| TGATCTAACTCCCTACTTAG+TGG | + | chr1_2:13153708-13153727 | None:intergenic | 40.0% | |
| CACTTGAGTGACATTAGACA+GGG | - | chr1_2:13153897-13153916 | Msa0057220:intron | 40.0% | |
| TATATGGTGAGAGAGTTGGA+AGG | - | chr1_2:13153981-13154000 | Msa0057220:intron | 40.0% | |
| GCATATCAGGAATCAATTGC+TGG | - | chr1_2:13154179-13154198 | Msa0057220:CDS | 40.0% | |
| !! | ATGGCTTTATCTGATAGCTG+TGG | + | chr1_2:13154245-13154264 | None:intergenic | 40.0% |
| ! | GAGGTAGAAGACAAGAGTAT+CGG | - | chr1_2:13154326-13154345 | Msa0057220:CDS | 40.0% |
| !! | GACAAGAGTATCGGAATTGA+AGG | - | chr1_2:13154335-13154354 | Msa0057220:CDS | 40.0% |
| ! | GTATCGGAATTGAAGGTATG+TGG | - | chr1_2:13154342-13154361 | Msa0057220:CDS | 40.0% |
| ! | CATATTCAAACACACTGGCT+GGG | + | chr1_2:13154375-13154394 | None:intergenic | 40.0% |
| ACATATTCAAACACACTGGC+TGG | + | chr1_2:13154376-13154395 | None:intergenic | 40.0% | |
| AAGTTGTGAAGTCACTGAAG+TGG | - | chr1_2:13154560-13154579 | Msa0057220:intron | 40.0% | |
| AGAAGAATGATAGCAGCTAC+CGG | + | chr1_2:13152464-13152483 | None:intergenic | 40.0% | |
| GTGTTTGCATTTACCTGAGA+TGG | + | chr1_2:13152519-13152538 | None:intergenic | 40.0% | |
| TTGGCCCCATTTGAATTCTA+GGG | + | chr1_2:13152663-13152682 | None:intergenic | 40.0% | |
| TTTGGCCCCATTTGAATTCT+AGG | + | chr1_2:13152664-13152683 | None:intergenic | 40.0% | |
| TACCAATCATTCACCTTACG+TGG | - | chr1_2:13152722-13152741 | Msa0057220:intron | 40.0% | |
| ! | GATTTTGCTGAACCTCGTAT+TGG | - | chr1_2:13152785-13152804 | Msa0057220:intron | 40.0% |
| AAACACTTCGAAACCTCACT+GGG | + | chr1_2:13152878-13152897 | None:intergenic | 40.0% | |
| ! | AGGTTTCGAAGTGTTTGACT+TGG | - | chr1_2:13152882-13152901 | Msa0057220:intron | 40.0% |
| TTGTTCTTTGCTTGTGGTGA+TGG | - | chr1_2:13152926-13152945 | Msa0057220:intron | 40.0% | |
| ! | ACTTGCTACTATTCATCCTC+TGG | - | chr1_2:13152955-13152974 | Msa0057220:intron | 40.0% |
| !!! | TTAGAGCCCTTTTTTGAGCT+TGG | - | chr1_2:13153191-13153210 | Msa0057220:intron | 40.0% |
| !!! | TAGAGCCCTTTTTTGAGCTT+GGG | - | chr1_2:13153192-13153211 | Msa0057220:intron | 40.0% |
| GGCACTCATTTCAAAATGGT+AGG | + | chr1_2:13153372-13153391 | None:intergenic | 40.0% | |
| !! | AAGTAGTGGGTCAACATGAA+CGG | + | chr1_2:13153507-13153526 | None:intergenic | 40.0% |
| TGATCTAACTCCCTACTTAG+TGG | + | chr1_2:13153708-13153727 | None:intergenic | 40.0% | |
| CACTTGAGTGACATTAGACA+GGG | - | chr1_2:13153897-13153916 | Msa0057220:intron | 40.0% | |
| TATATGGTGAGAGAGTTGGA+AGG | - | chr1_2:13153981-13154000 | Msa0057220:intron | 40.0% | |
| GCATATCAGGAATCAATTGC+TGG | - | chr1_2:13154179-13154198 | Msa0057220:CDS | 40.0% | |
| !! | ATGGCTTTATCTGATAGCTG+TGG | + | chr1_2:13154245-13154264 | None:intergenic | 40.0% |
| ! | GAGGTAGAAGACAAGAGTAT+CGG | - | chr1_2:13154326-13154345 | Msa0057220:CDS | 40.0% |
| !! | GACAAGAGTATCGGAATTGA+AGG | - | chr1_2:13154335-13154354 | Msa0057220:CDS | 40.0% |
| ! | GTATCGGAATTGAAGGTATG+TGG | - | chr1_2:13154342-13154361 | Msa0057220:CDS | 40.0% |
| ! | CATATTCAAACACACTGGCT+GGG | + | chr1_2:13154375-13154394 | None:intergenic | 40.0% |
| ACATATTCAAACACACTGGC+TGG | + | chr1_2:13154376-13154395 | None:intergenic | 40.0% | |
| AAGTTGTGAAGTCACTGAAG+TGG | - | chr1_2:13154560-13154579 | Msa0057220:intron | 40.0% | |
| TTACCTGAGATGGTTGAGAC+TGG | + | chr1_2:13152509-13152528 | None:intergenic | 45.0% | |
| AGGAGAGTCTGATTTCACTG+TGG | + | chr1_2:13152615-13152634 | None:intergenic | 45.0% | |
| AGGGTTTCTGATTCTGGTGA+GGG | + | chr1_2:13152644-13152663 | None:intergenic | 45.0% | |
| TAGGGTTTCTGATTCTGGTG+AGG | + | chr1_2:13152645-13152664 | None:intergenic | 45.0% | |
| CACCACGTAAGGTGAATGAT+TGG | + | chr1_2:13152727-13152746 | None:intergenic | 45.0% | |
| CGAGTAATCAACACCACGTA+AGG | + | chr1_2:13152738-13152757 | None:intergenic | 45.0% | |
| GGGAAACTCCTACTCTTGAA+AGG | - | chr1_2:13152825-13152844 | Msa0057220:intron | 45.0% | |
| CAAACACTTCGAAACCTCAC+TGG | + | chr1_2:13152879-13152898 | None:intergenic | 45.0% | |
| !! | TTTGCTTGTGGTGATGGTGA+TGG | - | chr1_2:13152932-13152951 | Msa0057220:intron | 45.0% |
| ! | TGGGCACCATCACTTTGAAA+TGG | - | chr1_2:13153679-13153698 | Msa0057220:intron | 45.0% |
| !! | GGGCACCATCACTTTGAAAT+GGG | - | chr1_2:13153680-13153699 | Msa0057220:intron | 45.0% |
| TGGCACCCATTTCAAAGTGA+TGG | + | chr1_2:13153688-13153707 | None:intergenic | 45.0% | |
| !! | TGAAATGGGTGCCACTAAGT+AGG | - | chr1_2:13153694-13153713 | Msa0057220:intron | 45.0% |
| !! | GAAATGGGTGCCACTAAGTA+GGG | - | chr1_2:13153695-13153714 | Msa0057220:intron | 45.0% |
| GTTGCTAGCGTTCCTATGTA+AGG | - | chr1_2:13153849-13153868 | Msa0057220:intron | 45.0% | |
| CCTGTCTAATGTCACTCAAG+TGG | + | chr1_2:13153899-13153918 | None:intergenic | 45.0% | |
| CCACTTGAGTGACATTAGAC+AGG | - | chr1_2:13153896-13153915 | Msa0057220:intron | 45.0% | |
| ! | GTGTTGCTAGCACTTCTTGT+TGG | - | chr1_2:13154019-13154038 | Msa0057220:intron | 45.0% |
| AGCACTTCTTGTTGGTCAGT+TGG | - | chr1_2:13154027-13154046 | Msa0057220:intron | 45.0% | |
| TGTTGGGCAGCGTAAAATAG+TGG | - | chr1_2:13154301-13154320 | Msa0057220:CDS | 45.0% | |
| TTACCTGAGATGGTTGAGAC+TGG | + | chr1_2:13152509-13152528 | None:intergenic | 45.0% | |
| AGGAGAGTCTGATTTCACTG+TGG | + | chr1_2:13152615-13152634 | None:intergenic | 45.0% | |
| AGGGTTTCTGATTCTGGTGA+GGG | + | chr1_2:13152644-13152663 | None:intergenic | 45.0% | |
| TAGGGTTTCTGATTCTGGTG+AGG | + | chr1_2:13152645-13152664 | None:intergenic | 45.0% | |
| CACCACGTAAGGTGAATGAT+TGG | + | chr1_2:13152727-13152746 | None:intergenic | 45.0% | |
| CGAGTAATCAACACCACGTA+AGG | + | chr1_2:13152738-13152757 | None:intergenic | 45.0% | |
| GGGAAACTCCTACTCTTGAA+AGG | - | chr1_2:13152825-13152844 | Msa0057220:intron | 45.0% | |
| CAAACACTTCGAAACCTCAC+TGG | + | chr1_2:13152879-13152898 | None:intergenic | 45.0% | |
| !! | TTTGCTTGTGGTGATGGTGA+TGG | - | chr1_2:13152932-13152951 | Msa0057220:intron | 45.0% |
| ! | TGGGCACCATCACTTTGAAA+TGG | - | chr1_2:13153679-13153698 | Msa0057220:intron | 45.0% |
| !! | GGGCACCATCACTTTGAAAT+GGG | - | chr1_2:13153680-13153699 | Msa0057220:intron | 45.0% |
| TGGCACCCATTTCAAAGTGA+TGG | + | chr1_2:13153688-13153707 | None:intergenic | 45.0% | |
| !! | TGAAATGGGTGCCACTAAGT+AGG | - | chr1_2:13153694-13153713 | Msa0057220:intron | 45.0% |
| !! | GAAATGGGTGCCACTAAGTA+GGG | - | chr1_2:13153695-13153714 | Msa0057220:intron | 45.0% |
| GTTGCTAGCGTTCCTATGTA+AGG | - | chr1_2:13153849-13153868 | Msa0057220:intron | 45.0% | |
| CCTGTCTAATGTCACTCAAG+TGG | + | chr1_2:13153899-13153918 | None:intergenic | 45.0% | |
| CCACTTGAGTGACATTAGAC+AGG | - | chr1_2:13153896-13153915 | Msa0057220:intron | 45.0% | |
| ! | GTGTTGCTAGCACTTCTTGT+TGG | - | chr1_2:13154019-13154038 | Msa0057220:intron | 45.0% |
| AGCACTTCTTGTTGGTCAGT+TGG | - | chr1_2:13154027-13154046 | Msa0057220:intron | 45.0% | |
| TGTTGGGCAGCGTAAAATAG+TGG | - | chr1_2:13154301-13154320 | Msa0057220:CDS | 45.0% | |
| !!! | TTTAATTTAAATATGAAATT+TGG | - | chr1_2:13154698-13154717 | Msa0057220:five_prime_UTR | 5.0% |
| !!! | TTTAATTTAAATATGAAATT+TGG | - | chr1_2:13154698-13154717 | Msa0057220:five_prime_UTR | 5.0% |
| ! | GCATGGTTGTAGATGGTGGT+CGG | + | chr1_2:13152487-13152506 | None:intergenic | 50.0% |
| ACTGGCATGGTTGTAGATGG+TGG | + | chr1_2:13152491-13152510 | None:intergenic | 50.0% | |
| GAGACTGGCATGGTTGTAGA+TGG | + | chr1_2:13152494-13152513 | None:intergenic | 50.0% | |
| TGAGATGGTTGAGACTGGCA+TGG | + | chr1_2:13152504-13152523 | None:intergenic | 50.0% | |
| ATGCCAGTCTCAACCATCTC+AGG | - | chr1_2:13152503-13152522 | Msa0057220:three_prime_UTR | 50.0% | |
| TTCAAATGGGGCCAAAAGCG+AGG | - | chr1_2:13152668-13152687 | Msa0057220:intron | 50.0% | |
| ! | TACCGCCTTTTCCTCGCTTT+TGG | + | chr1_2:13152682-13152701 | None:intergenic | 50.0% |
| ATGGTTCTTTCGTCCCAGTG+AGG | - | chr1_2:13152862-13152881 | Msa0057220:intron | 50.0% | |
| CAATCCAAACGGGCCATTAG+TGG | - | chr1_2:13153241-13153260 | Msa0057220:intron | 50.0% | |
| ! | TAGTGGGTCAACATGAACGG+TGG | + | chr1_2:13153504-13153523 | None:intergenic | 50.0% |
| GGAACTCTACACTGCCAACA+AGG | + | chr1_2:13153796-13153815 | None:intergenic | 50.0% | |
| TGGGCAGCGTAAAATAGTGG+AGG | - | chr1_2:13154304-13154323 | Msa0057220:CDS | 50.0% | |
| ! | GCAGCGTAAAATAGTGGAGG+AGG | - | chr1_2:13154307-13154326 | Msa0057220:CDS | 50.0% |
| ! | GCATGGTTGTAGATGGTGGT+CGG | + | chr1_2:13152487-13152506 | None:intergenic | 50.0% |
| ACTGGCATGGTTGTAGATGG+TGG | + | chr1_2:13152491-13152510 | None:intergenic | 50.0% | |
| GAGACTGGCATGGTTGTAGA+TGG | + | chr1_2:13152494-13152513 | None:intergenic | 50.0% | |
| TGAGATGGTTGAGACTGGCA+TGG | + | chr1_2:13152504-13152523 | None:intergenic | 50.0% | |
| ATGCCAGTCTCAACCATCTC+AGG | - | chr1_2:13152503-13152522 | Msa0057220:three_prime_UTR | 50.0% | |
| TTCAAATGGGGCCAAAAGCG+AGG | - | chr1_2:13152668-13152687 | Msa0057220:intron | 50.0% | |
| ! | TACCGCCTTTTCCTCGCTTT+TGG | + | chr1_2:13152682-13152701 | None:intergenic | 50.0% |
| ATGGTTCTTTCGTCCCAGTG+AGG | - | chr1_2:13152862-13152881 | Msa0057220:intron | 50.0% | |
| CAATCCAAACGGGCCATTAG+TGG | - | chr1_2:13153241-13153260 | Msa0057220:intron | 50.0% | |
| ! | TAGTGGGTCAACATGAACGG+TGG | + | chr1_2:13153504-13153523 | None:intergenic | 50.0% |
| GGAACTCTACACTGCCAACA+AGG | + | chr1_2:13153796-13153815 | None:intergenic | 50.0% | |
| TGGGCAGCGTAAAATAGTGG+AGG | - | chr1_2:13154304-13154323 | Msa0057220:CDS | 50.0% | |
| ! | GCAGCGTAAAATAGTGGAGG+AGG | - | chr1_2:13154307-13154326 | Msa0057220:CDS | 50.0% |
| GTTCACGGCATGCGTTGTGA+TGG | + | chr1_2:13152437-13152456 | None:intergenic | 55.0% | |
| ACGCATGCCGTGAACTTCAC+CGG | - | chr1_2:13152442-13152461 | Msa0057220:three_prime_UTR | 55.0% | |
| GCAGCTACCGGTGAAGTTCA+CGG | + | chr1_2:13152452-13152471 | None:intergenic | 55.0% | |
| TCTGATTCTGGTGAGGGAGC+AGG | + | chr1_2:13152638-13152657 | None:intergenic | 55.0% | |
| TGGGGCCAAAAGCGAGGAAA+AGG | - | chr1_2:13152674-13152693 | Msa0057220:intron | 55.0% | |
| GGCCAAAAGCGAGGAAAAGG+CGG | - | chr1_2:13152677-13152696 | Msa0057220:intron | 55.0% | |
| GACTCCACTAATGGCCCGTT+TGG | + | chr1_2:13153248-13153267 | None:intergenic | 55.0% | |
| ! | CACAAAGGGCGCACTCCAAA+TGG | + | chr1_2:13154264-13154283 | None:intergenic | 55.0% |
| GTTCACGGCATGCGTTGTGA+TGG | + | chr1_2:13152437-13152456 | None:intergenic | 55.0% | |
| ACGCATGCCGTGAACTTCAC+CGG | - | chr1_2:13152442-13152461 | Msa0057220:three_prime_UTR | 55.0% | |
| GCAGCTACCGGTGAAGTTCA+CGG | + | chr1_2:13152452-13152471 | None:intergenic | 55.0% | |
| TCTGATTCTGGTGAGGGAGC+AGG | + | chr1_2:13152638-13152657 | None:intergenic | 55.0% | |
| TGGGGCCAAAAGCGAGGAAA+AGG | - | chr1_2:13152674-13152693 | Msa0057220:intron | 55.0% | |
| GGCCAAAAGCGAGGAAAAGG+CGG | - | chr1_2:13152677-13152696 | Msa0057220:intron | 55.0% | |
| GACTCCACTAATGGCCCGTT+TGG | + | chr1_2:13153248-13153267 | None:intergenic | 55.0% | |
| ! | CACAAAGGGCGCACTCCAAA+TGG | + | chr1_2:13154264-13154283 | None:intergenic | 55.0% |
| GATTCTGGTGAGGGAGCAGG+AGG | + | chr1_2:13152635-13152654 | None:intergenic | 60.0% | |
| GATTCTGGTGAGGGAGCAGG+AGG | + | chr1_2:13152635-13152654 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 13152412 | 13154721 | 13152412 | ID=Msa0057220;Name=Msa0057220 |
| chr1_2 | mRNA | 13152412 | 13154721 | 13152412 | ID=Msa0057220-mRNA-1;Parent=Msa0057220;Name=Msa0057220-mRNA-1;_AED=0.12;_eAED=0.12;_QI=91|0.5|1|1|1|1|3|131|168 |
| chr1_2 | exon | 13152412 | 13152668 | 13152412 | ID=Msa0057220-mRNA-1:exon:5159;Parent=Msa0057220-mRNA-1 |
| chr1_2 | exon | 13154157 | 13154515 | 13154157 | ID=Msa0057220-mRNA-1:exon:5158;Parent=Msa0057220-mRNA-1 |
| chr1_2 | exon | 13154609 | 13154721 | 13154609 | ID=Msa0057220-mRNA-1:exon:5157;Parent=Msa0057220-mRNA-1 |
| chr1_2 | five_prime_UTR | 13154631 | 13154721 | 13154631 | ID=Msa0057220-mRNA-1:five_prime_utr;Parent=Msa0057220-mRNA-1 |
| chr1_2 | CDS | 13154609 | 13154630 | 13154609 | ID=Msa0057220-mRNA-1:cds;Parent=Msa0057220-mRNA-1 |
| chr1_2 | CDS | 13154157 | 13154515 | 13154157 | ID=Msa0057220-mRNA-1:cds;Parent=Msa0057220-mRNA-1 |
| chr1_2 | CDS | 13152543 | 13152668 | 13152543 | ID=Msa0057220-mRNA-1:cds;Parent=Msa0057220-mRNA-1 |
| chr1_2 | three_prime_UTR | 13152412 | 13152542 | 13152412 | ID=Msa0057220-mRNA-1:three_prime_utr;Parent=Msa0057220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
