Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063590 | RHN78432.1 | 76.946 | 334 | 20 | 4 | 1 | 285 | 1 | 326 | 1.97e-166 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063590 | A0A396JM28 | 76.946 | 334 | 20 | 4 | 1 | 285 | 1 | 326 | 9.42e-167 | 474 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0063590 | Msa0101940 | 0.825290 | 5.080405e-54 | -8.615850e-47 |
| Msa0063590 | Msa0190840 | 0.811497 | 6.798338e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063590 | MtrunA17_Chr1g0165431 | 76.946 | 334 | 20 | 4 | 1 | 285 | 1 | 326 | 1.81e-170 | 474 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063590 | AT5G08540.1 | 52.424 | 330 | 102 | 4 | 7 | 282 | 1 | 329 | 2.70e-107 | 315 |
Find 61 sgRNAs with CRISPR-Local
Find 698 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTAGGGTTAGTGTTAT+TGG | 0.210074 | 1_2:+24190673 | None:intergenic |
| ATTCATATCCAGACAGGTTT+TGG | 0.271336 | 1_2:-24189061 | Msa0063590:intron |
| ATCATCTTGAATCCAAAATA+TGG | 0.278099 | 1_2:-24182135 | Msa0063590:three_prime_UTR |
| CTAGCTGTTCAGGCCCTCTT+TGG | 0.292467 | 1_2:-24186900 | Msa0063590:CDS |
| AGTGCTGTAGAGACACATTT+TGG | 0.307195 | 1_2:-24181941 | Msa0063590:three_prime_UTR |
| GACTATTATGTGTGTTCGTT+TGG | 0.317967 | 1_2:-24181802 | Msa0063590:intron |
| CAAGAGAAAACTAGCTGTTC+AGG | 0.359683 | 1_2:-24186910 | Msa0063590:CDS |
| TGCGTACTTCAGCTTTCTCT+TGG | 0.365358 | 1_2:-24182052 | Msa0063590:three_prime_UTR |
| ATTAAATCAGCTACAACATC+AGG | 0.370866 | 1_2:+24188980 | None:intergenic |
| TTAGTTGTCAAGGAAATCTT+CGG | 0.373589 | 1_2:-24182710 | Msa0063590:CDS |
| GCTGTTCCGCTTGGTTATCT+AGG | 0.381767 | 1_2:-24190494 | Msa0063590:CDS |
| CCTGATTTATTCATTACAAT+AGG | 0.384185 | 1_2:+24186951 | None:intergenic |
| TAAATCAGGTTATACTGAAA+AGG | 0.391414 | 1_2:-24186937 | Msa0063590:CDS |
| CCATCTTCTCAAGCGAATCT+AGG | 0.413021 | 1_2:+24182303 | Msa0063600:CDS |
| TAGTTGTCAAGGAAATCTTC+GGG | 0.415832 | 1_2:-24182709 | Msa0063590:CDS |
| TTTGTTTGGATTGATTATTA+GGG | 0.418887 | 1_2:+24190660 | None:intergenic |
| CCTAGATTCGCTTGAGAAGA+TGG | 0.435482 | 1_2:-24182303 | Msa0063590:CDS |
| TAGCTGATTTAATTCAACTA+AGG | 0.440271 | 1_2:-24188970 | Msa0063590:CDS |
| TCAGTTACACAAGCAATTCC+TGG | 0.441636 | 1_2:-24190554 | Msa0063590:CDS |
| AGGGTTAGTGTTATTGGAAG+AGG | 0.451423 | 1_2:+24190679 | None:intergenic |
| AAATCAGGTTATACTGAAAA+GGG | 0.451512 | 1_2:-24186936 | Msa0063590:CDS |
| CCTATTGTAATGAATAAATC+AGG | 0.452441 | 1_2:-24186951 | Msa0063590:CDS |
| ACAATTCCAATGTGTAGAGC+AGG | 0.459640 | 1_2:-24182105 | Msa0063590:three_prime_UTR |
| CTTGACCTTGTTGAATTCAC+CGG | 0.459910 | 1_2:-24190578 | Msa0063590:CDS |
| GAAGATTTCCTTGACAACTA+AGG | 0.473890 | 1_2:+24182712 | None:intergenic |
| TGCTGTTAAAGACTGGCCTA+TGG | 0.481243 | 1_2:+24181995 | None:intergenic |
| GCTACAACATCAGGGTTGAA+TGG | 0.484197 | 1_2:+24188989 | None:intergenic |
| TGGATTCTCGCTGTTCCGCT+TGG | 0.485199 | 1_2:-24190503 | Msa0063590:CDS |
| CGAAGAATTGTGCGAGACAA+AGG | 0.514186 | 1_2:-24188893 | Msa0063590:intron |
| TAGTGAGGCTTCATGATGCT+TGG | 0.517154 | 1_2:-24182255 | Msa0063590:exon |
| AGCAATTCCTGGTCCACGAG+TGG | 0.518626 | 1_2:-24190543 | Msa0063590:CDS |
| AAGTTGAGGAAGAACTTCCA+TGG | 0.524950 | 1_2:-24190616 | Msa0063590:intron |
| GATGAAGATAAGAATAAGAG+TGG | 0.532593 | 1_2:+24190740 | None:intergenic |
| AAACAACGGTTGAGATTGAA+AGG | 0.537763 | 1_2:+24190787 | None:intergenic |
| CAATCTTCTCATGATCGACT+TGG | 0.540436 | 1_2:-24182179 | Msa0063590:three_prime_UTR |
| GAGAATCCACGGCAACGAAG+TGG | 0.540493 | 1_2:+24190517 | None:intergenic |
| AGCGGAACAGCGAGAATCCA+CGG | 0.540855 | 1_2:+24190506 | None:intergenic |
| TGGGTCCCACTTCGTTGCCG+TGG | 0.540976 | 1_2:-24190523 | Msa0063590:CDS |
| AGATAGCTCCTTAGTTGTCA+AGG | 0.541338 | 1_2:-24182720 | Msa0063590:CDS |
| GTGGGACCCACTCGTGGACC+AGG | 0.544234 | 1_2:+24190536 | None:intergenic |
| TGTTCAGGCCCTCTTTGGAA+AGG | 0.545946 | 1_2:-24186895 | Msa0063590:CDS |
| AATTGCTTGTGTAACTGAAC+CGG | 0.552177 | 1_2:+24190559 | None:intergenic |
| GCTGTTAAAGACTGGCCTAT+GGG | 0.560568 | 1_2:+24181996 | None:intergenic |
| ACATCAATGCTGTTAAAGAC+TGG | 0.564334 | 1_2:+24181988 | None:intergenic |
| ATAGAAGACCTTTCCAAAGA+GGG | 0.564726 | 1_2:+24186887 | None:intergenic |
| ATACACACAACTTCTGAAGC+TGG | 0.564898 | 1_2:-24182329 | Msa0063590:CDS |
| AACAACGGTTGAGATTGAAA+GGG | 0.570439 | 1_2:+24190788 | None:intergenic |
| CAATTCCAATGTGTAGAGCA+GGG | 0.586961 | 1_2:-24182104 | Msa0063590:three_prime_UTR |
| AGAATCCACGGCAACGAAGT+GGG | 0.594319 | 1_2:+24190518 | None:intergenic |
| ACAACGGTTGAGATTGAAAG+GGG | 0.595406 | 1_2:+24190789 | None:intergenic |
| AACGAAGTGGGACCCACTCG+TGG | 0.598245 | 1_2:+24190530 | None:intergenic |
| GATAGAAGACCTTTCCAAAG+AGG | 0.622411 | 1_2:+24186886 | None:intergenic |
| GCAATTCCTGGTCCACGAGT+GGG | 0.631783 | 1_2:-24190542 | Msa0063590:CDS |
| TGATGAGGATGCTGAAGCAA+CGG | 0.636890 | 1_2:+24190706 | None:intergenic |
| TAACAGCATTGATGTTACTG+TGG | 0.648606 | 1_2:-24181980 | Msa0063590:three_prime_UTR |
| AAAGGTCTTCTATCTATCTG+AGG | 0.657891 | 1_2:-24186877 | Msa0063590:intron |
| TTAAATCAGCTACAACATCA+GGG | 0.663431 | 1_2:+24188981 | None:intergenic |
| CTGAACCGGTGAATTCAACA+AGG | 0.671168 | 1_2:+24190573 | None:intergenic |
| AGATTCAGAAGATTCTAGTG+AGG | 0.671608 | 1_2:-24182270 | Msa0063590:CDS |
| AGTTGTCAAGGAAATCTTCG+GGG | 0.716074 | 1_2:-24182708 | Msa0063590:CDS |
| GTAAGACCTAGATAACCAAG+CGG | 0.723907 | 1_2:+24190488 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTCAATGATTTTTA+GGG | - | chr1_2:24185664-24185683 | Msa0063590:intron | 10.0% |
| !!! | TATGTTAAATAAACTTTTTA+AGG | + | chr1_2:24185794-24185813 | None:intergenic | 10.0% |
| !! | AACTAAATTATTAATGTAAA+AGG | + | chr1_2:24189745-24189764 | None:intergenic | 10.0% |
| !!! | GATTCTTTATATTTTTTTTT+AGG | - | chr1_2:24189787-24189806 | Msa0063590:intron | 10.0% |
| !!! | AAGATTTTTCACAAATATTT+AGG | + | chr1_2:24182931-24182950 | None:intergenic | 15.0% |
| !!! | TTTTAAAAACTAAATCAAAC+AGG | + | chr1_2:24184241-24184260 | None:intergenic | 15.0% |
| !!! | TAAAAACTTTAAAACTTGTT+TGG | - | chr1_2:24184283-24184302 | Msa0063590:intron | 15.0% |
| !! | AAGAATTAAAAAAATCTGTT+TGG | + | chr1_2:24184571-24184590 | Msa0063610:CDS | 15.0% |
| !!! | CAAATTCTGTTTTATTTTAA+TGG | + | chr1_2:24184832-24184851 | Msa0063610:CDS | 15.0% |
| !!! | AAAATAAAACAGAATTTGTT+TGG | - | chr1_2:24184834-24184853 | Msa0063590:intron | 15.0% |
| !! | ATGAAATATATAAATAACGT+AGG | - | chr1_2:24184993-24185012 | Msa0063590:intron | 15.0% |
| !! | AAGTTACTTGTAAATAAAAA+AGG | - | chr1_2:24185523-24185542 | Msa0063590:intron | 15.0% |
| !!! | GTTTTATTTCAATGATTTTT+AGG | - | chr1_2:24185663-24185682 | Msa0063590:intron | 15.0% |
| !! | ATGGAATTATAATAGTTTAA+GGG | + | chr1_2:24188108-24188127 | None:intergenic | 15.0% |
| !! | ATTCAATATGAAATAGATAA+TGG | + | chr1_2:24188231-24188250 | None:intergenic | 15.0% |
| !! | TTATCTATTTCATATTGAAT+TGG | - | chr1_2:24188231-24188250 | Msa0063590:intron | 15.0% |
| !!! | TATATTTTTTTTTAGGCAAA+AGG | - | chr1_2:24189794-24189813 | Msa0063590:intron | 15.0% |
| !! | TTTGTTTGGATTGATTATTA+GGG | + | chr1_2:24181981-24182000 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGGATTGATTATT+AGG | + | chr1_2:24181982-24182001 | None:intergenic | 20.0% |
| !! | TTAAACAACAATACATTATG+AGG | - | chr1_2:24182617-24182636 | Msa0063590:intron | 20.0% |
| !! | TAAACAACAATACATTATGA+GGG | - | chr1_2:24182618-24182637 | Msa0063590:intron | 20.0% |
| !! | TAGTGTATCGTTAATTAAAA+GGG | + | chr1_2:24182815-24182834 | None:intergenic | 20.0% |
| !! | ATAGTGTATCGTTAATTAAA+AGG | + | chr1_2:24182816-24182835 | None:intergenic | 20.0% |
| !!! | TTTTAATTAACGATACACTA+TGG | - | chr1_2:24182815-24182834 | Msa0063590:intron | 20.0% |
| !! | ATATAAACCTGCAAAATTAA+GGG | + | chr1_2:24183006-24183025 | None:intergenic | 20.0% |
| !! | AATATAAACCTGCAAAATTA+AGG | + | chr1_2:24183007-24183026 | None:intergenic | 20.0% |
| !! | TATTCAAAGTTTAAAAAGGT+CGG | + | chr1_2:24183037-24183056 | None:intergenic | 20.0% |
| !!! | ACCTTTTTAAACTTTGAATA+TGG | - | chr1_2:24183037-24183056 | Msa0063590:intron | 20.0% |
| !!! | TTTTTCTAATTTTGGAGTTT+TGG | + | chr1_2:24184411-24184430 | None:intergenic | 20.0% |
| !!! | ATTTACCATTTTCTCATTAA+TGG | - | chr1_2:24184439-24184458 | Msa0063590:intron | 20.0% |
| !!! | TGTATTTTTTAGAAAAGTCA+AGG | + | chr1_2:24184486-24184505 | Msa0063610:CDS | 20.0% |
| !!! | GAAAAACTTAAAAACTTGTT+TGG | + | chr1_2:24184517-24184536 | Msa0063610:CDS | 20.0% |
| !!! | ATTTATCATCTAAAATCCAA+TGG | + | chr1_2:24184697-24184716 | Msa0063610:CDS | 20.0% |
| !!! | TTGTTTGTTTTTGATATACA+AGG | - | chr1_2:24184731-24184750 | Msa0063590:intron | 20.0% |
| !!! | TTTTATTTTAATGGCATATG+GGG | + | chr1_2:24184823-24184842 | Msa0063610:CDS | 20.0% |
| !!! | GTTTTATTTTAATGGCATAT+GGG | + | chr1_2:24184824-24184843 | Msa0063610:CDS | 20.0% |
| !!! | TGTTTTATTTTAATGGCATA+TGG | + | chr1_2:24184825-24184844 | Msa0063610:CDS | 20.0% |
| !! | AAAAGGAATTTGGATAAAAT+AGG | - | chr1_2:24185327-24185346 | Msa0063590:intron | 20.0% |
| !! | ATTTGCTCAACTATTATTAT+GGG | - | chr1_2:24185911-24185930 | Msa0063590:intron | 20.0% |
| !! | TAAAACAATTTCAGTATTAC+TGG | + | chr1_2:24185937-24185956 | None:intergenic | 20.0% |
| !!! | AGTAATACTGAAATTGTTTT+AGG | - | chr1_2:24185936-24185955 | Msa0063590:intron | 20.0% |
| !!! | GTAATACTGAAATTGTTTTA+GGG | - | chr1_2:24185937-24185956 | Msa0063590:intron | 20.0% |
| !! | ATACAAAATGAAGAGAAAAT+AGG | - | chr1_2:24186025-24186044 | Msa0063590:intron | 20.0% |
| !! | TACAAAATGAAGAGAAAATA+GGG | - | chr1_2:24186026-24186045 | Msa0063590:intron | 20.0% |
| !!! | TTCTGTTTTGTAATTCATTA+AGG | - | chr1_2:24186840-24186859 | Msa0063590:intron | 20.0% |
| !!! | TCTGTTTTGTAATTCATTAA+GGG | - | chr1_2:24186841-24186860 | Msa0063590:intron | 20.0% |
| !! | ATGGAAATATAACAGTTTAA+GGG | - | chr1_2:24187044-24187063 | Msa0063590:intron | 20.0% |
| !! | ATCAAAAAGTTTCAAATTGA+TGG | - | chr1_2:24187530-24187549 | Msa0063590:intron | 20.0% |
| !! | ATCAAAAAGTTTCAAATGTA+TGG | + | chr1_2:24187611-24187630 | None:intergenic | 20.0% |
| !! | GATGGAATTATAATAGTTTA+AGG | + | chr1_2:24188109-24188128 | None:intergenic | 20.0% |
| !! | AGCTTATCTATTTAGATAAT+AGG | - | chr1_2:24188852-24188871 | Msa0063590:intron | 20.0% |
| !!! | ATAAAAAAAAGTTTTCCAGA+TGG | + | chr1_2:24188881-24188900 | None:intergenic | 20.0% |
| !!! | TCTGGAAAACTTTTTTTTAT+AGG | - | chr1_2:24188881-24188900 | Msa0063590:intron | 20.0% |
| !! | ACAAATCTGTATATAAAAGA+AGG | - | chr1_2:24189049-24189068 | Msa0063590:CDS | 20.0% |
| !! | AATCATTCACAATTGTATTT+CGG | + | chr1_2:24189082-24189101 | None:intergenic | 20.0% |
| !!! | TGATTTTTTGAGAGAAATTT+CGG | - | chr1_2:24189097-24189116 | Msa0063590:intron | 20.0% |
| !! | AATTGTTAGTGATAGTTATA+GGG | - | chr1_2:24189459-24189478 | Msa0063590:intron | 20.0% |
| !!! | TGTTGATAAAAAAGTTCAAA+TGG | + | chr1_2:24190193-24190212 | None:intergenic | 20.0% |
| !!! | ATTGTTTTACTTCCATATTT+TGG | + | chr1_2:24190518-24190537 | None:intergenic | 20.0% |
| !!! | GTTTTTTCTTCATTTCTTTA+TGG | - | chr1_2:24190556-24190575 | Msa0063590:CDS | 20.0% |
| !!! | AGAATAAGAGTGGTTTTTTT+GGG | + | chr1_2:24181891-24181910 | None:intergenic | 25.0% |
| !!! | AAGAATAAGAGTGGTTTTTT+TGG | + | chr1_2:24181892-24181911 | None:intergenic | 25.0% |
| !! | ATTATTAGGGTTAGTGTTAT+TGG | + | chr1_2:24181968-24181987 | None:intergenic | 25.0% |
| !!! | AACAATTTCTTCGTTTTGTT+TGG | + | chr1_2:24181995-24182014 | None:intergenic | 25.0% |
| ! | GTTAAAACTGTTAAGAAGTT+TGG | - | chr1_2:24182189-24182208 | Msa0063590:three_prime_UTR | 25.0% |
| ! | AAACAACAATACATTATGAG+GGG | - | chr1_2:24182619-24182638 | Msa0063590:intron | 25.0% |
| ! | TGAAAAATCTTAGTGAAATG+TGG | - | chr1_2:24182940-24182959 | Msa0063590:intron | 25.0% |
| ! | GCCATATTCAAAGTTTAAAA+AGG | + | chr1_2:24183041-24183060 | None:intergenic | 25.0% |
| !!! | CTGTATTTATGGTATTTTAG+TGG | + | chr1_2:24183170-24183189 | None:intergenic | 25.0% |
| ! | AAATACCATAAATACAGAAC+TGG | - | chr1_2:24183173-24183192 | Msa0063590:intron | 25.0% |
| ! | ATATTACTAATAAGCCACAA+AGG | + | chr1_2:24183393-24183412 | None:intergenic | 25.0% |
| ! | TTGTGGCTTATTAGTAATAT+AGG | - | chr1_2:24183393-24183412 | Msa0063590:intron | 25.0% |
| !!! | TATTTTTTGATCTAGACAGA+TGG | + | chr1_2:24183432-24183451 | None:intergenic | 25.0% |
| !! | AGTTGTTACTTAAAATCAGA+TGG | + | chr1_2:24183553-24183572 | None:intergenic | 25.0% |
| !! | TAGCTGATTTAATTCAACTA+AGG | - | chr1_2:24183668-24183687 | Msa0063590:intron | 25.0% |
| !!! | TGAGCATAATTATTTTTCTC+TGG | - | chr1_2:24183879-24183898 | Msa0063590:intron | 25.0% |
| ! | CTTGCTCTTTATATTAACAA+AGG | - | chr1_2:24183902-24183921 | Msa0063590:intron | 25.0% |
| ! | ATTAACAAAGGTTCAATATC+TGG | - | chr1_2:24183914-24183933 | Msa0063590:intron | 25.0% |
| ! | TTAACAAAGGTTCAATATCT+GGG | - | chr1_2:24183915-24183934 | Msa0063590:intron | 25.0% |
| ! | AAAAACCAAAACAGCAAATA+TGG | - | chr1_2:24184368-24184387 | Msa0063590:intron | 25.0% |
| ! | AAAACCAAAACAGCAAATAT+GGG | - | chr1_2:24184369-24184388 | Msa0063590:intron | 25.0% |
| ! | ACTCCAAAATTAGAAAAACA+CGG | - | chr1_2:24184413-24184432 | Msa0063590:intron | 25.0% |
| !! | TTTTGCCATTAATGAGAAAA+TGG | + | chr1_2:24184447-24184466 | Msa0063610:CDS | 25.0% |
| !!! | GACTTTTCTAAAAAATACAC+AGG | - | chr1_2:24184487-24184506 | Msa0063590:intron | 25.0% |
| ! | AAAGCAAAACTAAATCAAAC+AGG | - | chr1_2:24184647-24184666 | Msa0063590:intron | 25.0% |
| ! | CAATCAAAAGTGATGAATAA+GGG | + | chr1_2:24184673-24184692 | Msa0063610:CDS | 25.0% |
| !!! | TTGTTTTTGATATACAAGGT+TGG | - | chr1_2:24184735-24184754 | Msa0063590:intron | 25.0% |
| !!! | TTTATTTTAATGGCATATGG+GGG | + | chr1_2:24184822-24184841 | Msa0063610:CDS | 25.0% |
| !! | ATTTCATTCTTTTACCACTA+CGG | + | chr1_2:24184980-24184999 | None:intergenic | 25.0% |
| ! | AATTGAATAACCACCAATAT+TGG | - | chr1_2:24185267-24185286 | Msa0063590:intron | 25.0% |
| ! | TTCATTATTACTGCCAATAT+TGG | + | chr1_2:24185283-24185302 | None:intergenic | 25.0% |
| ! | ATTGGCAGTAATAATGAATT+TGG | - | chr1_2:24185285-24185304 | Msa0063590:intron | 25.0% |
| ! | TTGAAACAGCTTAATAGTAA+TGG | + | chr1_2:24185478-24185497 | None:intergenic | 25.0% |
| ! | CCTGATTTATTCATTACAAT+AGG | + | chr1_2:24185690-24185709 | None:intergenic | 25.0% |
| ! | CCTATTGTAATGAATAAATC+AGG | - | chr1_2:24185687-24185706 | Msa0063590:intron | 25.0% |
| ! | TAAATCAGGTTATACTGAAA+AGG | - | chr1_2:24185701-24185720 | Msa0063590:intron | 25.0% |
| ! | AAATCAGGTTATACTGAAAA+GGG | - | chr1_2:24185702-24185721 | Msa0063590:intron | 25.0% |
| ! | GTTAAGATTATCATATCAGA+TGG | + | chr1_2:24185879-24185898 | None:intergenic | 25.0% |
| ! | TGATATGATAATCTTAACTG+TGG | - | chr1_2:24185881-24185900 | Msa0063590:intron | 25.0% |
| ! | TAATAATAGTTGAGCAAATC+CGG | + | chr1_2:24185910-24185929 | None:intergenic | 25.0% |
| !! | GATTTGCTCAACTATTATTA+TGG | - | chr1_2:24185910-24185929 | Msa0063590:intron | 25.0% |
| ! | ATTCAAGATATTAAAGCCAT+AGG | + | chr1_2:24186000-24186019 | None:intergenic | 25.0% |
| !! | TTTCTCTTCATTTTGTATGA+TGG | + | chr1_2:24186023-24186042 | None:intergenic | 25.0% |
| ! | TTTGGTTATGTGTAAAATAC+TGG | - | chr1_2:24186459-24186478 | Msa0063590:intron | 25.0% |
| !! | AAGGAAAACAATTTCTGAAA+AGG | + | chr1_2:24186791-24186810 | None:intergenic | 25.0% |
| !! | AATTGTTTTCCTTTTCAGAA+AGG | - | chr1_2:24186798-24186817 | Msa0063590:intron | 25.0% |
| !! | ATTGTTTTCCTTTTCAGAAA+GGG | - | chr1_2:24186799-24186818 | Msa0063590:intron | 25.0% |
| !!! | TTTTGTTTTGTAAATCAGAG+AGG | - | chr1_2:24186866-24186885 | Msa0063590:intron | 25.0% |
| !!! | TTTGTTTTGTAAATCAGAGA+GGG | - | chr1_2:24186867-24186886 | Msa0063590:intron | 25.0% |
| ! | GATGGAAATATAACAGTTTA+AGG | - | chr1_2:24187043-24187062 | Msa0063590:intron | 25.0% |
| ! | TATCAAACAATAATCACATG+TGG | + | chr1_2:24188061-24188080 | None:intergenic | 25.0% |
| ! | TATTGTTTGATAGAGTCTAA+TGG | - | chr1_2:24187099-24187118 | Msa0063590:intron | 25.0% |
| ! | TAAAAAAGCGAGCTATATAT+TGG | + | chr1_2:24187480-24187499 | None:intergenic | 25.0% |
| ! | AAGCAAACAAATATGAAAGA+TGG | + | chr1_2:24187717-24187736 | None:intergenic | 25.0% |
| !! | GTTATTCTGTAATTCTGAAA+GGG | + | chr1_2:24188307-24188326 | None:intergenic | 25.0% |
| ! | TGTTATTCTGTAATTCTGAA+AGG | + | chr1_2:24188308-24188327 | None:intergenic | 25.0% |
| !! | TATTTTTCTAATTCCCTTTC+AGG | + | chr1_2:24188341-24188360 | None:intergenic | 25.0% |
| !!! | ACCTTACAAATTGGTTTTTT+AGG | - | chr1_2:24189350-24189369 | Msa0063590:intron | 25.0% |
| ! | CAATTGTTAGTGATAGTTAT+AGG | - | chr1_2:24189458-24189477 | Msa0063590:intron | 25.0% |
| !!! | AGACTGTTTTGAATTCAAAA+AGG | - | chr1_2:24190415-24190434 | Msa0063590:intron | 25.0% |
| !! | TTTTGAATTCAAAAAGGTTG+AGG | - | chr1_2:24190421-24190440 | Msa0063590:intron | 25.0% |
| !!! | ATATTTTGGATTCAAGATGA+TGG | + | chr1_2:24190504-24190523 | None:intergenic | 25.0% |
| ! | ATCATCTTGAATCCAAAATA+TGG | - | chr1_2:24190503-24190522 | Msa0063590:CDS | 25.0% |
| !!! | CATTTTGGTATAGTTATAGA+AGG | - | chr1_2:24190712-24190731 | Msa0063590:CDS | 25.0% |
| !!! | TATGTGTGTTCGTTTTTTTT+TGG | - | chr1_2:24190739-24190758 | Msa0063590:CDS | 25.0% |
| !!! | ATTCTAGAGAGATTTTTGGT+TGG | + | chr1_2:24181829-24181848 | None:intergenic | 30.0% |
| GATGAAGATAAGAATAAGAG+TGG | + | chr1_2:24181901-24181920 | None:intergenic | 30.0% | |
| AATTGTTGAAGTTGAAGTTG+AGG | - | chr1_2:24182008-24182027 | Msa0063590:three_prime_UTR | 30.0% | |
| ACAAGAAACGAACCAATTTA+CGG | + | chr1_2:24182233-24182252 | Msa0063600:CDS | 30.0% | |
| ! | TTTGTTTGTTTCTTTGTTGC+AGG | - | chr1_2:24182466-24182485 | Msa0063590:intron | 30.0% |
| AAGAGGAAGAGATGAAATTA+AGG | - | chr1_2:24182535-24182554 | Msa0063590:intron | 30.0% | |
| !! | AATTAAGGTTGATGATCTCA+AGG | - | chr1_2:24182550-24182569 | Msa0063590:intron | 30.0% |
| ATTGTTGTCATGTGACTTAA+AGG | - | chr1_2:24182664-24182683 | Msa0063590:intron | 30.0% | |
| ! | TGGTCAATGCTTTAAATTTC+TGG | - | chr1_2:24182835-24182854 | Msa0063590:intron | 30.0% |
| ! | CACAAATATTTAGGATTGTG+AGG | + | chr1_2:24182922-24182941 | None:intergenic | 30.0% |
| ! | CAAAAAACCCTTAATTTTGC+AGG | - | chr1_2:24182996-24183015 | Msa0063590:intron | 30.0% |
| TAAACTTTGAATATGGCATG+TGG | - | chr1_2:24183044-24183063 | Msa0063590:intron | 30.0% | |
| !! | GTTCTTAGCTTTCTTTTTAC+CGG | - | chr1_2:24183452-24183471 | Msa0063590:intron | 30.0% |
| TTAAATCAGCTACAACATCA+GGG | + | chr1_2:24183660-24183679 | None:intergenic | 30.0% | |
| ATTAAATCAGCTACAACATC+AGG | + | chr1_2:24183661-24183680 | None:intergenic | 30.0% | |
| AGGTAATGTCTTCTTAATAC+AGG | - | chr1_2:24183765-24183784 | Msa0063590:intron | 30.0% | |
| AAAATAAACTTCCATGCACA+AGG | + | chr1_2:24183813-24183832 | None:intergenic | 30.0% | |
| ! | TTGTGCATGGAAGTTTATTT+TGG | - | chr1_2:24183812-24183831 | Msa0063590:intron | 30.0% |
| !!! | ATGGAAGTTTATTTTGGCTT+AGG | - | chr1_2:24183818-24183837 | Msa0063590:intron | 30.0% |
| TCCATGATGTCAAATTCAAA+TGG | - | chr1_2:24183938-24183957 | Msa0063590:intron | 30.0% | |
| ACCATTTGAATTTGACATCA+TGG | + | chr1_2:24183942-24183961 | None:intergenic | 30.0% | |
| !! | CCATTTGATTTGAACCATTA+GGG | + | chr1_2:24184060-24184079 | None:intergenic | 30.0% |
| !! | ACCATTTGATTTGAACCATT+AGG | + | chr1_2:24184061-24184080 | None:intergenic | 30.0% |
| ATCAAATGGTTTCAAAATGC+AGG | - | chr1_2:24184071-24184090 | Msa0063590:intron | 30.0% | |
| AAATAGATCTCCAAACACTT+AGG | - | chr1_2:24184214-24184233 | Msa0063590:intron | 30.0% | |
| AATAGATCTCCAAACACTTA+GGG | - | chr1_2:24184215-24184234 | Msa0063590:intron | 30.0% | |
| AAACCAAAACAGCAAATATG+GGG | - | chr1_2:24184370-24184389 | Msa0063590:intron | 30.0% | |
| ! | TCTCCGTGTTTTTCTAATTT+TGG | + | chr1_2:24184419-24184438 | None:intergenic | 30.0% |
| CCAATCAAAAGTGATGAATA+AGG | + | chr1_2:24184674-24184693 | Msa0063610:CDS | 30.0% | |
| !! | CCTTATTCATCACTTTTGAT+TGG | - | chr1_2:24184671-24184690 | Msa0063590:intron | 30.0% |
| !!! | TTATTTTAATGGCATATGGG+GGG | + | chr1_2:24184821-24184840 | Msa0063610:CDS | 30.0% |
| ! | ACTAAGTTGTTTCACTTAGA+TGG | + | chr1_2:24184862-24184881 | Msa0063610:CDS | 30.0% |
| TCTTTCACAGGTTACAAAAA+TGG | + | chr1_2:24185063-24185082 | None:intergenic | 30.0% | |
| !! | TCTTAATGGATTTCTTTCAC+AGG | + | chr1_2:24185075-24185094 | None:intergenic | 30.0% |
| AACATATTGTGGGATCTTAA+TGG | + | chr1_2:24185089-24185108 | None:intergenic | 30.0% | |
| ATTAAGATCCCACAATATGT+TGG | - | chr1_2:24185088-24185107 | Msa0063590:intron | 30.0% | |
| ACATGACATTCAACAGTTTA+AGG | + | chr1_2:24185191-24185210 | None:intergenic | 30.0% | |
| CTACAAACATAAGGATGTAT+GGG | + | chr1_2:24185237-24185256 | None:intergenic | 30.0% | |
| TTACCAAACCTACAAACATA+AGG | + | chr1_2:24185246-24185265 | None:intergenic | 30.0% | |
| ATTATTACTGCCAATATTGG+TGG | + | chr1_2:24185280-24185299 | None:intergenic | 30.0% | |
| GAATTTGGATAAAATAGCAG+TGG | - | chr1_2:24185300-24185319 | Msa0063590:intron | 30.0% | |
| AAAATAGCAGTGGAGAAAAA+AGG | - | chr1_2:24185310-24185329 | Msa0063590:intron | 30.0% | |
| AGGAATTTGGATAAAATAGG+AGG | - | chr1_2:24185330-24185349 | Msa0063590:intron | 30.0% | |
| GGAATTTGGATAAAATAGGA+GGG | - | chr1_2:24185331-24185350 | Msa0063590:intron | 30.0% | |
| !!! | GGATTTTTAGTCGAATTTGT+CGG | - | chr1_2:24185352-24185371 | Msa0063590:intron | 30.0% |
| GAACAATAATGTTTCTCAGT+TGG | - | chr1_2:24185422-24185441 | Msa0063590:intron | 30.0% | |
| GAAAAAATGATTTCATGGAC+TGG | + | chr1_2:24185583-24185602 | None:intergenic | 30.0% | |
| AGCAGGAAAAAATGATTTCA+TGG | + | chr1_2:24185588-24185607 | None:intergenic | 30.0% | |
| TCTAGTTAAATGCAGAAGTT+CGG | - | chr1_2:24185612-24185631 | Msa0063590:intron | 30.0% | |
| ATAATCTTAACTGTGGTTTC+CGG | - | chr1_2:24185888-24185907 | Msa0063590:intron | 30.0% | |
| TAAACCATAGAGTTCAAGTA+AGG | - | chr1_2:24186056-24186075 | Msa0063590:intron | 30.0% | |
| ATTAATGTTAAGCTTGTGTG+TGG | + | chr1_2:24186129-24186148 | None:intergenic | 30.0% | |
| TTTCTTAGTGAAACTCATCA+AGG | - | chr1_2:24186255-24186274 | Msa0063590:intron | 30.0% | |
| TACTAAATTAACCCTCCAAA+CGG | + | chr1_2:24186503-24186522 | None:intergenic | 30.0% | |
| ACAAAAATGAAGTGATGAAG+AGG | + | chr1_2:24186638-24186657 | None:intergenic | 30.0% | |
| TTGTTCTGTTCCAATTCAAT+AGG | - | chr1_2:24186909-24186928 | Msa0063590:CDS | 30.0% | |
| TGTTCTGTTCCAATTCAATA+GGG | - | chr1_2:24186910-24186929 | Msa0063590:CDS | 30.0% | |
| AAAGCTATTCCCTATTGAAT+TGG | + | chr1_2:24186922-24186941 | None:intergenic | 30.0% | |
| AATTCAATAGGGAATAGCTT+TGG | - | chr1_2:24186921-24186940 | Msa0063590:CDS | 30.0% | |
| GTTATATTTCCATCCTATGT+CGG | + | chr1_2:24187037-24187056 | None:intergenic | 30.0% | |
| AGTCTAATGGTAGAATTTCT+AGG | - | chr1_2:24187112-24187131 | Msa0063590:intron | 30.0% | |
| GTCTAATGGTAGAATTTCTA+GGG | - | chr1_2:24187113-24187132 | Msa0063590:intron | 30.0% | |
| AAAGTGAAATCTGTTTCATG+AGG | - | chr1_2:24187230-24187249 | Msa0063590:intron | 30.0% | |
| CACTACTTCAAGAAATATCA+AGG | - | chr1_2:24187277-24187296 | Msa0063590:intron | 30.0% | |
| ACTTCAAGAAATATCAAGGA+TGG | - | chr1_2:24187281-24187300 | Msa0063590:intron | 30.0% | |
| CTTCAAGAAATATCAAGGAT+GGG | - | chr1_2:24187282-24187301 | Msa0063590:intron | 30.0% | |
| AAATATCAAGGATGGGTAAA+TGG | - | chr1_2:24187289-24187308 | Msa0063590:intron | 30.0% | |
| AATATCAAGGATGGGTAAAT+GGG | - | chr1_2:24187290-24187309 | Msa0063590:intron | 30.0% | |
| TGTAGAACAATGTATCCAAT+GGG | + | chr1_2:24187766-24187785 | None:intergenic | 30.0% | |
| TTGTAGAACAATGTATCCAA+TGG | + | chr1_2:24187765-24187784 | None:intergenic | 30.0% | |
| ATTGTTCTACAAAAGTCTTG+AGG | - | chr1_2:24187384-24187403 | Msa0063590:intron | 30.0% | |
| AAAAGTCTTGAGGTAACATT+GGG | - | chr1_2:24187394-24187413 | Msa0063590:intron | 30.0% | |
| TAGTAAGAAAGCAAGAGAAA+TGG | - | chr1_2:24187450-24187469 | Msa0063590:intron | 30.0% | |
| !!! | AGTTCGCTTTTTTACCTAAA+TGG | + | chr1_2:24187655-24187674 | None:intergenic | 30.0% |
| TTGTAGAACAATGTATCCAA+TGG | - | chr1_2:24187765-24187784 | Msa0063590:intron | 30.0% | |
| TGTAGAACAATGTATCCAAT+GGG | - | chr1_2:24187766-24187785 | Msa0063590:intron | 30.0% | |
| AAATATCGAGGATGGTAAAT+GGG | + | chr1_2:24187851-24187870 | None:intergenic | 30.0% | |
| !!! | GAAATTGATTTTAACTGCTC+AGG | + | chr1_2:24187952-24187971 | None:intergenic | 30.0% |
| TACTTCCATTTGATGTTGTT+TGG | - | chr1_2:24188013-24188032 | Msa0063590:intron | 30.0% | |
| TATTGTTTGATAGAGTCTGA+TGG | + | chr1_2:24188053-24188072 | None:intergenic | 30.0% | |
| TTATAATTCCATCCTATGTC+AGG | - | chr1_2:24188116-24188135 | Msa0063590:intron | 30.0% | |
| TTTGTGAAAGAGAAACAAAG+AGG | - | chr1_2:24188361-24188380 | Msa0063590:intron | 30.0% | |
| TTGTGAAAGAGAAACAAAGA+GGG | - | chr1_2:24188362-24188381 | Msa0063590:intron | 30.0% | |
| TTGGGTTATGTGTAAAATAC+TGG | + | chr1_2:24188611-24188630 | None:intergenic | 30.0% | |
| TTATAGCTATTCTATCACTC+AGG | - | chr1_2:24188735-24188754 | Msa0063590:intron | 30.0% | |
| TATAGCTATTCTATCACTCA+GGG | - | chr1_2:24188736-24188755 | Msa0063590:intron | 30.0% | |
| !! | ACAGATTTGTTGTCTATGAA+AGG | + | chr1_2:24189039-24189058 | None:intergenic | 30.0% |
| ! | TCTACCTTCTTTTCCATAAT+AGG | + | chr1_2:24189129-24189148 | None:intergenic | 30.0% |
| TCAAGCAATGTCTTGATATA+TGG | - | chr1_2:24189293-24189312 | Msa0063590:intron | 30.0% | |
| TAAGTAGTGCTTATAAAGCT+TGG | - | chr1_2:24189318-24189337 | Msa0063590:intron | 30.0% | |
| AAGTAGTGCTTATAAAGCTT+GGG | - | chr1_2:24189319-24189338 | Msa0063590:intron | 30.0% | |
| AAAAACCAATTTGTAAGGTG+AGG | + | chr1_2:24189349-24189368 | None:intergenic | 30.0% | |
| GCCTAAAAAACCAATTTGTA+AGG | + | chr1_2:24189354-24189373 | None:intergenic | 30.0% | |
| CTTTGAACCATATCTTTATG+TGG | + | chr1_2:24189490-24189509 | None:intergenic | 30.0% | |
| ! | TCAAAGCATCAAGAACTATT+TGG | - | chr1_2:24189504-24189523 | Msa0063590:intron | 30.0% |
| CATTAGACATGATTCGTAAT+AGG | - | chr1_2:24189540-24189559 | Msa0063590:intron | 30.0% | |
| ! | CATAACCTTTACCTTTTAAG+TGG | + | chr1_2:24189600-24189619 | None:intergenic | 30.0% |
| CACTTAAAAGGTAAAGGTTA+TGG | - | chr1_2:24189598-24189617 | Msa0063590:intron | 30.0% | |
| !! | GTTGTTGCGATGTTTATTTT+GGG | - | chr1_2:24189620-24189639 | Msa0063590:intron | 30.0% |
| ! | AAGCCTTTTTGTTAACTCTT+GGG | - | chr1_2:24189707-24189726 | Msa0063590:intron | 30.0% |
| TTAGTTGTCAAGGAAATCTT+CGG | - | chr1_2:24189928-24189947 | Msa0063590:intron | 30.0% | |
| TTCATGCTAGTTAAATTGAC+TGG | - | chr1_2:24189997-24190016 | Msa0063590:intron | 30.0% | |
| ! | CTTTAAGAAACTTCAAAGAG+AGG | + | chr1_2:24190080-24190099 | None:intergenic | 30.0% |
| GACAATGCATAAAATATGCA+AGG | + | chr1_2:24190790-24190809 | None:intergenic | 30.0% | |
| !!! | AGAGATTTTTGGTTGGAAGA+GGG | + | chr1_2:24181822-24181841 | None:intergenic | 35.0% |
| AACAACGGTTGAGATTGAAA+GGG | + | chr1_2:24181853-24181872 | None:intergenic | 35.0% | |
| AAACAACGGTTGAGATTGAA+AGG | + | chr1_2:24181854-24181873 | None:intergenic | 35.0% | |
| !!! | ATAAGAGTGGTTTTTTTGGG+TGG | + | chr1_2:24181888-24181907 | None:intergenic | 35.0% |
| !! | ATTGGAAGAGGATTTTGATG+AGG | + | chr1_2:24181950-24181969 | None:intergenic | 35.0% |
| !! | AGAGCTTTTTCTTGAATCCA+TGG | + | chr1_2:24182042-24182061 | None:intergenic | 35.0% |
| AATTGCTTGTGTAACTGAAC+CGG | + | chr1_2:24182082-24182101 | None:intergenic | 35.0% | |
| GCTTCGTAGATTGTGATTAA+AGG | - | chr1_2:24182431-24182450 | Msa0063590:intron | 35.0% | |
| ! | TTTGTTTCTTTGTTGCAGGT+TGG | - | chr1_2:24182470-24182489 | Msa0063590:intron | 35.0% |
| AAATGCAATGCTGTGTAAGT+CGG | - | chr1_2:24182496-24182515 | Msa0063590:intron | 35.0% | |
| TCTCAAGGCTATTGAGAATA+AGG | - | chr1_2:24182565-24182584 | Msa0063590:intron | 35.0% | |
| TTGCGTACAATACACCAAAT+GGG | - | chr1_2:24182738-24182757 | Msa0063590:CDS | 35.0% | |
| TGTAGTAGACCTCTAAATTG+TGG | - | chr1_2:24182869-24182888 | Msa0063590:intron | 35.0% | |
| ! | AGTCTGAAACCACAATTTAG+AGG | + | chr1_2:24182881-24182900 | None:intergenic | 35.0% |
| TACAAAGTGAACACAGTTCA+GGG | + | chr1_2:24182966-24182985 | None:intergenic | 35.0% | |
| !! | GCTTGTTGTTTAATGGTGTA+TGG | - | chr1_2:24183072-24183091 | Msa0063590:intron | 35.0% |
| ! | TATGGCTCCTCTTTTTCTTT+TGG | - | chr1_2:24183090-24183109 | Msa0063590:intron | 35.0% |
| ! | ATGGCTCCTCTTTTTCTTTT+GGG | - | chr1_2:24183091-24183110 | Msa0063590:intron | 35.0% |
| ATAACCCCCAAAAGAAAAAG+AGG | + | chr1_2:24183100-24183119 | None:intergenic | 35.0% | |
| CAACACCAGTTCTGTATTTA+TGG | + | chr1_2:24183181-24183200 | None:intergenic | 35.0% | |
| CTATCACGATGAATTGATGA+TGG | + | chr1_2:24183214-24183233 | None:intergenic | 35.0% | |
| TAATTATGTAGCCACCTTTG+TGG | - | chr1_2:24183376-24183395 | Msa0063590:intron | 35.0% | |
| TTACTAATAAGCCACAAAGG+TGG | + | chr1_2:24183390-24183409 | None:intergenic | 35.0% | |
| ! | ATTCATATCCAGACAGGTTT+TGG | - | chr1_2:24183577-24183596 | Msa0063590:intron | 35.0% |
| ! | CAGGACACATTTTTCATTTG+AGG | - | chr1_2:24183784-24183803 | Msa0063590:intron | 35.0% |
| TGATTTGAACCATTAGGGTT+GGG | + | chr1_2:24184055-24184074 | None:intergenic | 35.0% | |
| ! | TTGATTTGAACCATTAGGGT+TGG | + | chr1_2:24184056-24184075 | None:intergenic | 35.0% |
| CCCTAATGGTTCAAATCAAA+TGG | - | chr1_2:24184057-24184076 | Msa0063590:intron | 35.0% | |
| CAAAGGAAATACTATTCCCT+CGG | + | chr1_2:24184130-24184149 | None:intergenic | 35.0% | |
| GAGGGAATAGTATTTCCTTT+GGG | - | chr1_2:24184129-24184148 | Msa0063590:intron | 35.0% | |
| TTTCCTTTGGGTAACATTGA+AGG | - | chr1_2:24184141-24184160 | Msa0063590:intron | 35.0% | |
| TTCCTTTGGGTAACATTGAA+GGG | - | chr1_2:24184142-24184161 | Msa0063590:intron | 35.0% | |
| CAGGTAACAAAACCAAACAA+TGG | + | chr1_2:24184183-24184202 | None:intergenic | 35.0% | |
| ATCTATTTGACATGCTTGAC+AGG | + | chr1_2:24184202-24184221 | None:intergenic | 35.0% | |
| !!! | AAACCCCATATTTGCTGTTT+TGG | + | chr1_2:24184376-24184395 | None:intergenic | 35.0% |
| ! | TTTGATATACAAGGTTGGCT+TGG | - | chr1_2:24184740-24184759 | Msa0063590:intron | 35.0% |
| AATTGAGAAGTGGAGTGATT+AGG | - | chr1_2:24184778-24184797 | Msa0063590:intron | 35.0% | |
| !!! | TATTTTAATGGCATATGGGG+GGG | + | chr1_2:24184820-24184839 | Msa0063610:CDS | 35.0% |
| !! | TTTTTCAGCATCAATAGCCT+TGG | + | chr1_2:24184908-24184927 | Msa0063610:CDS | 35.0% |
| AATTCCGACCAACATATTGT+GGG | + | chr1_2:24185099-24185118 | None:intergenic | 35.0% | |
| ATTTATCTGACCAATGTCAC+AGG | - | chr1_2:24185162-24185181 | Msa0063590:intron | 35.0% | |
| !! | GATGTATGGGTTGATTTACT+GGG | + | chr1_2:24185224-24185243 | None:intergenic | 35.0% |
| CCTACAAACATAAGGATGTA+TGG | + | chr1_2:24185238-24185257 | None:intergenic | 35.0% | |
| CCATACATCCTTATGTTTGT+AGG | - | chr1_2:24185235-24185254 | Msa0063590:intron | 35.0% | |
| CATCCTTATGTTTGTAGGTT+TGG | - | chr1_2:24185240-24185259 | Msa0063590:intron | 35.0% | |
| CAGTGGAGAAAAAAGGAATT+TGG | - | chr1_2:24185317-24185336 | Msa0063590:intron | 35.0% | |
| !! | TTCTCAGTTGGTAGCATATT+TGG | - | chr1_2:24185434-24185453 | Msa0063590:intron | 35.0% |
| !! | TCTCAGTTGGTAGCATATTT+GGG | - | chr1_2:24185435-24185454 | Msa0063590:intron | 35.0% |
| !! | CATATTTGGGTTGTATACTC+TGG | - | chr1_2:24185448-24185467 | Msa0063590:intron | 35.0% |
| GCATTTAACTAGATATCAGC+AGG | + | chr1_2:24185605-24185624 | None:intergenic | 35.0% | |
| ATAGAAGACCTTTCCAAAGA+GGG | + | chr1_2:24185754-24185773 | None:intergenic | 35.0% | |
| AAAGGTCTTCTATCTATCTG+AGG | - | chr1_2:24185761-24185780 | Msa0063590:intron | 35.0% | |
| ! | TATCATATCAGATGGTTCTG+AGG | + | chr1_2:24185871-24185890 | None:intergenic | 35.0% |
| !!! | GAAATTGTTTTAGGGAGATG+TGG | - | chr1_2:24185945-24185964 | Msa0063590:intron | 35.0% |
| TGGTGGTATGGTATATTATC+AGG | + | chr1_2:24185975-24185994 | None:intergenic | 35.0% | |
| AGATATTAAAGCCATAGGAC+TGG | + | chr1_2:24185995-24186014 | None:intergenic | 35.0% | |
| TAAATCTCTCACAGCAGTAT+AGG | + | chr1_2:24186174-24186193 | None:intergenic | 35.0% | |
| GTGCCTATTTGACTAACATA+GGG | + | chr1_2:24186228-24186247 | None:intergenic | 35.0% | |
| GATGAGTTTCACTAAGAAAC+CGG | + | chr1_2:24186254-24186273 | None:intergenic | 35.0% | |
| TGTTTCTCTGTTGTCAATAG+TGG | - | chr1_2:24186289-24186308 | Msa0063590:intron | 35.0% | |
| !!! | TCCAAACGGTTTTAAGTGAA+GGG | + | chr1_2:24186489-24186508 | None:intergenic | 35.0% |
| TTCACTTAAAACCGTTTGGA+GGG | - | chr1_2:24186489-24186508 | Msa0063590:intron | 35.0% | |
| ! | TGTGGAGAAGAGTGATTTTA+GGG | + | chr1_2:24186536-24186555 | None:intergenic | 35.0% |
| ! | AATGAAGAGGTTGTGTTTTG+CGG | + | chr1_2:24186562-24186581 | None:intergenic | 35.0% |
| TTGTTGTACGTACAATGAAG+AGG | + | chr1_2:24186575-24186594 | None:intergenic | 35.0% | |
| CCTATTTCAGAAATGAAGAG+AGG | + | chr1_2:24186664-24186683 | None:intergenic | 35.0% | |
| !! | CCTCTCTTCATTTCTGAAAT+AGG | - | chr1_2:24186661-24186680 | Msa0063590:intron | 35.0% |
| AAGAGAAACAGAAACAGAGA+AGG | + | chr1_2:24186748-24186767 | None:intergenic | 35.0% | |
| ! | ACAAAACTCCCTTTCTGAAA+AGG | + | chr1_2:24186810-24186829 | None:intergenic | 35.0% |
| TCAACAACATAGGATGATGA+TGG | + | chr1_2:24186961-24186980 | None:intergenic | 35.0% | |
| TACTCCCATTTGATGTTGTT+TGG | + | chr1_2:24187139-24187158 | None:intergenic | 35.0% | |
| TGCTCATGAAGAAAGTAGAT+TGG | - | chr1_2:24187205-24187224 | Msa0063590:intron | 35.0% | |
| CAAAAGTCTTGAGGTAACAT+TGG | - | chr1_2:24187393-24187412 | Msa0063590:intron | 35.0% | |
| !!! | AGCTCGCTTTTTTACCTAAA+TGG | - | chr1_2:24187486-24187505 | Msa0063590:intron | 35.0% |
| ! | AAATTGATGGTTGAAGCAGT+TGG | - | chr1_2:24187543-24187562 | Msa0063590:intron | 35.0% |
| TTGGTCAATATGGTCCTAAT+TGG | - | chr1_2:24187562-24187581 | Msa0063590:intron | 35.0% | |
| CTGGTCAATATTGACCAATT+AGG | + | chr1_2:24187579-24187598 | None:intergenic | 35.0% | |
| AAATGTATGGTTGAAGCAAC+TGG | + | chr1_2:24187598-24187617 | None:intergenic | 35.0% | |
| CGTTGAACACAATTCCATTT+AGG | - | chr1_2:24187638-24187657 | Msa0063590:intron | 35.0% | |
| AAAAGTCCTGAGGTTACATT+GGG | + | chr1_2:24187747-24187766 | None:intergenic | 35.0% | |
| ATTGTTCTACAAAAGTCCTG+AGG | + | chr1_2:24187757-24187776 | None:intergenic | 35.0% | |
| GAAATATCGAGGATGGTAAA+TGG | + | chr1_2:24187852-24187871 | None:intergenic | 35.0% | |
| ACTTCAAGAAATATCGAGGA+TGG | + | chr1_2:24187859-24187878 | None:intergenic | 35.0% | |
| GGAAGAAAGTAGATTGACAA+AGG | + | chr1_2:24187931-24187950 | None:intergenic | 35.0% | |
| AAAATCAATTTCACCTCCTC+TGG | - | chr1_2:24187960-24187979 | Msa0063590:intron | 35.0% | |
| CAACATCAAATGGAAGTAAC+AGG | + | chr1_2:24188011-24188030 | None:intergenic | 35.0% | |
| TGGTTTAAATAGCTCAACAG+AGG | - | chr1_2:24188145-24188164 | Msa0063590:intron | 35.0% | |
| TTCTAATTCCCTTTCAGGAA+GGG | + | chr1_2:24188336-24188355 | None:intergenic | 35.0% | |
| TTTCTAATTCCCTTTCAGGA+AGG | + | chr1_2:24188337-24188356 | None:intergenic | 35.0% | |
| AACCTGTTTCAGAAATGAAG+AGG | - | chr1_2:24188438-24188457 | Msa0063590:intron | 35.0% | |
| !! | AACCTCTTCATTTCTGAAAC+AGG | + | chr1_2:24188443-24188462 | None:intergenic | 35.0% |
| ! | ATGGGAGAAGAGTGATTTTA+GGG | - | chr1_2:24188543-24188562 | Msa0063590:intron | 35.0% |
| TTCTAAGTTAACCCTCCAAA+CGG | - | chr1_2:24188567-24188586 | Msa0063590:intron | 35.0% | |
| AAGCTATCTGTTGTCAATAG+CGG | + | chr1_2:24188717-24188736 | None:intergenic | 35.0% | |
| GGGTAAGATATGATATCAAG+CGG | - | chr1_2:24188804-24188823 | Msa0063590:intron | 35.0% | |
| TTAGATAATAGGCTTCCATC+TGG | - | chr1_2:24188863-24188882 | Msa0063590:intron | 35.0% | |
| ! | ATCCAATGATGGAAGATCTT+CGG | - | chr1_2:24188922-24188941 | Msa0063590:CDS | 35.0% |
| GAAAGGATTGTATGATCCAA+AGG | + | chr1_2:24189022-24189041 | None:intergenic | 35.0% | |
| ATTTCGGATAGCACCTATTA+TGG | - | chr1_2:24189113-24189132 | Msa0063590:intron | 35.0% | |
| AGCACCTATTATGGAAAAGA+AGG | - | chr1_2:24189122-24189141 | Msa0063590:intron | 35.0% | |
| TTCATTGTGTTGGGTGTAAA+GGG | - | chr1_2:24189260-24189279 | Msa0063590:intron | 35.0% | |
| GTCCTCTTGAAACATGAATT+GGG | + | chr1_2:24189376-24189395 | None:intergenic | 35.0% | |
| TGTCCTCTTGAAACATGAAT+TGG | + | chr1_2:24189377-24189396 | None:intergenic | 35.0% | |
| GGATTGACCACATAAAGATA+TGG | - | chr1_2:24189480-24189499 | Msa0063590:intron | 35.0% | |
| TTTAAGTGGCATGAGCTATA+TGG | + | chr1_2:24189586-24189605 | None:intergenic | 35.0% | |
| ! | TATAGCTCATGCCACTTAAA+AGG | - | chr1_2:24189586-24189605 | Msa0063590:intron | 35.0% |
| ! | TCATGCCACTTAAAAGGTAA+AGG | - | chr1_2:24189592-24189611 | Msa0063590:intron | 35.0% |
| ! | GGTTGTTGCGATGTTTATTT+TGG | - | chr1_2:24189619-24189638 | Msa0063590:intron | 35.0% |
| CAAAAGATCACACTTTGTTC+TGG | - | chr1_2:24189651-24189670 | Msa0063590:intron | 35.0% | |
| !!! | TGGTTCTATCTTCTGGTTTT+AGG | - | chr1_2:24189681-24189700 | Msa0063590:intron | 35.0% |
| ! | GAAGCCTTTTTGTTAACTCT+TGG | - | chr1_2:24189706-24189725 | Msa0063590:intron | 35.0% |
| GTACCCAAGAGTTAACAAAA+AGG | + | chr1_2:24189713-24189732 | None:intergenic | 35.0% | |
| ! | CTATCTTTTGAACAGAACTC+TGG | + | chr1_2:24189904-24189923 | None:intergenic | 35.0% |
| GAAGATTTCCTTGACAACTA+AGG | + | chr1_2:24189929-24189948 | None:intergenic | 35.0% | |
| TAGTTGTCAAGGAAATCTTC+GGG | - | chr1_2:24189929-24189948 | Msa0063590:intron | 35.0% | |
| AGATTCAGAAGATTCTAGTG+AGG | - | chr1_2:24190368-24190387 | Msa0063590:intron | 35.0% | |
| ACATCAATGCTGTTAAAGAC+TGG | + | chr1_2:24190653-24190672 | None:intergenic | 35.0% | |
| !! | TAACAGCATTGATGTTACTG+TGG | - | chr1_2:24190658-24190677 | Msa0063590:CDS | 35.0% |
| !!! | GTGTGTTCGTTTTTTTTTGG+TGG | - | chr1_2:24190742-24190761 | Msa0063590:CDS | 35.0% |
| !!! | TGTTCGTTTTTTTTTGGTGG+TGG | - | chr1_2:24190745-24190764 | Msa0063590:CDS | 35.0% |
| TGCATAAAATATGCAAGGTC+CGG | + | chr1_2:24190785-24190804 | None:intergenic | 35.0% | |
| GACTATTATGTGTGTTCGTT+TGG | - | chr1_2:24190836-24190855 | Msa0063590:CDS | 35.0% | |
| !!! | GAGAGATTTTTGGTTGGAAG+AGG | + | chr1_2:24181823-24181842 | None:intergenic | 40.0% |
| !! | GGGGATTCTAGAGAGATTTT+TGG | + | chr1_2:24181833-24181852 | None:intergenic | 40.0% |
| ACAACGGTTGAGATTGAAAG+GGG | + | chr1_2:24181852-24181871 | None:intergenic | 40.0% | |
| TGGAGTCTTGGGAAAAACAA+CGG | + | chr1_2:24181868-24181887 | None:intergenic | 40.0% | |
| !!! | GTTTTTTTGGGTGGAGTCTT+GGG | + | chr1_2:24181879-24181898 | None:intergenic | 40.0% |
| ! | AGGGTTAGTGTTATTGGAAG+AGG | + | chr1_2:24181962-24181981 | None:intergenic | 40.0% |
| AAGTTGAGGAAGAACTTCCA+TGG | - | chr1_2:24182022-24182041 | Msa0063590:three_prime_UTR | 40.0% | |
| CTTGACCTTGTTGAATTCAC+CGG | - | chr1_2:24182060-24182079 | Msa0063590:three_prime_UTR | 40.0% | |
| TCAGTTACACAAGCAATTCC+TGG | - | chr1_2:24182084-24182103 | Msa0063590:three_prime_UTR | 40.0% | |
| GTAAGACCTAGATAACCAAG+CGG | + | chr1_2:24182153-24182172 | Msa0063600:intron | 40.0% | |
| AGGCTATTGAGAATAAGGTG+AGG | - | chr1_2:24182570-24182589 | Msa0063590:intron | 40.0% | |
| TACATTATGAGGGGTAACCT+TGG | - | chr1_2:24182628-24182647 | Msa0063590:intron | 40.0% | |
| CAGCCTCTTGTGTAAATAAC+CGG | - | chr1_2:24182709-24182728 | Msa0063590:CDS | 40.0% | |
| AGCCTCTTGTGTAAATAACC+GGG | - | chr1_2:24182710-24182729 | Msa0063590:CDS | 40.0% | |
| TACCCGGTTATTTACACAAG+AGG | + | chr1_2:24182715-24182734 | None:intergenic | 40.0% | |
| CTTGTGTAAATAACCGGGTA+AGG | - | chr1_2:24182715-24182734 | Msa0063590:CDS | 40.0% | |
| GTTGCGTACAATACACCAAA+TGG | - | chr1_2:24182737-24182756 | Msa0063590:CDS | 40.0% | |
| TGCGTACAATACACCAAATG+GGG | - | chr1_2:24182739-24182758 | Msa0063590:CDS | 40.0% | |
| CGTTAATTAAAAGGGCAACC+CGG | + | chr1_2:24182807-24182826 | None:intergenic | 40.0% | |
| CTACAAAGTGAACACAGTTC+AGG | + | chr1_2:24182967-24182986 | None:intergenic | 40.0% | |
| ! | TGGCTCCTCTTTTTCTTTTG+GGG | - | chr1_2:24183092-24183111 | Msa0063590:intron | 40.0% |
| ! | TCTTTTGCCTGTCTAACCTT+CGG | - | chr1_2:24183271-24183290 | Msa0063590:intron | 40.0% |
| AATTTCACCGAAGGTTAGAC+AGG | + | chr1_2:24183281-24183300 | None:intergenic | 40.0% | |
| AACAGCAAGAATTTCACCGA+AGG | + | chr1_2:24183290-24183309 | None:intergenic | 40.0% | |
| !! | TTAGCTTTCTTTTTACCGGC+TGG | - | chr1_2:24183456-24183475 | Msa0063590:intron | 40.0% |
| !! | TAGCTTTCTTTTTACCGGCT+GGG | - | chr1_2:24183457-24183476 | Msa0063590:intron | 40.0% |
| TTTGTCTTCCTGTGCAAATG+TGG | - | chr1_2:24183527-24183546 | Msa0063590:intron | 40.0% | |
| CTGCAAATTCATATCCAGAC+AGG | - | chr1_2:24183571-24183590 | Msa0063590:intron | 40.0% | |
| !!! | TATCCAGACAGGTTTTGGTT+TGG | - | chr1_2:24183582-24183601 | Msa0063590:intron | 40.0% |
| ATTTGAGGAATCCTTGTGCA+TGG | - | chr1_2:24183799-24183818 | Msa0063590:intron | 40.0% | |
| ! | GTAGTGGTGGTGAATTGTTT+GGG | + | chr1_2:24184020-24184039 | None:intergenic | 40.0% |
| ! | AGTAGTGGTGGTGAATTGTT+TGG | + | chr1_2:24184021-24184040 | None:intergenic | 40.0% |
| CTATTCATTAGTACCACCGA+GGG | - | chr1_2:24184111-24184130 | Msa0063590:intron | 40.0% | |
| CGAGGGAATAGTATTTCCTT+TGG | - | chr1_2:24184128-24184147 | Msa0063590:intron | 40.0% | |
| TGGTCATTCATGCCATTGTT+TGG | - | chr1_2:24184168-24184187 | Msa0063590:intron | 40.0% | |
| !! | CATCACTTTTGATTGGCCAT+TGG | - | chr1_2:24184678-24184697 | Msa0063590:intron | 40.0% |
| ! | AGAGACTTTTCTCAAAGAGG+GGG | + | chr1_2:24184950-24184969 | Msa0063610:CDS | 40.0% |
| ! | CAGAGACTTTTCTCAAAGAG+GGG | + | chr1_2:24184951-24184970 | Msa0063610:CDS | 40.0% |
| ! | GCAGAGACTTTTCTCAAAGA+GGG | + | chr1_2:24184952-24184971 | Msa0063610:CDS | 40.0% |
| ! | AGCAGAGACTTTTCTCAAAG+AGG | + | chr1_2:24184953-24184972 | Msa0063610:CDS | 40.0% |
| TAAAGATACAACTCTGCTGG+TGG | + | chr1_2:24185040-24185059 | None:intergenic | 40.0% | |
| TGGTAAAGATACAACTCTGC+TGG | + | chr1_2:24185043-24185062 | None:intergenic | 40.0% | |
| AGATCCCACAATATGTTGGT+CGG | - | chr1_2:24185092-24185111 | Msa0063590:intron | 40.0% | |
| CAATTCCGACCAACATATTG+TGG | + | chr1_2:24185100-24185119 | None:intergenic | 40.0% | |
| ATGTTGGTCGGAATTGCTAA+AGG | - | chr1_2:24185104-24185123 | Msa0063590:intron | 40.0% | |
| TATCAGAGTCTATCCTTGCA+GGG | + | chr1_2:24185139-24185158 | None:intergenic | 40.0% | |
| !! | ATGGGTTGATTTACTGGGAA+GGG | + | chr1_2:24185219-24185238 | None:intergenic | 40.0% |
| !! | TATGGGTTGATTTACTGGGA+AGG | + | chr1_2:24185220-24185239 | None:intergenic | 40.0% |
| !! | GGATGTATGGGTTGATTTAC+TGG | + | chr1_2:24185225-24185244 | None:intergenic | 40.0% |
| AGTCGAATTTGTCGGTACTA+TGG | - | chr1_2:24185360-24185379 | Msa0063590:intron | 40.0% | |
| AAAGGACCGATACAGAATCA+CGG | - | chr1_2:24185541-24185560 | Msa0063590:intron | 40.0% | |
| CATGTTCCGTGATTCTGTAT+CGG | + | chr1_2:24185550-24185569 | None:intergenic | 40.0% | |
| CAAGAGAAAACTAGCTGTTC+AGG | - | chr1_2:24185728-24185747 | Msa0063590:intron | 40.0% | |
| GATAGAAGACCTTTCCAAAG+AGG | + | chr1_2:24185755-24185774 | None:intergenic | 40.0% | |
| ! | GTCTTCTATCTATCTGAGGT+AGG | - | chr1_2:24185765-24185784 | Msa0063590:intron | 40.0% |
| TATTAAAGCCATAGGACTGG+TGG | + | chr1_2:24185992-24186011 | None:intergenic | 40.0% | |
| ACCATAGAGTTCAAGTAAGG+TGG | - | chr1_2:24186059-24186078 | Msa0063590:intron | 40.0% | |
| TCCACCTTACTTGAACTCTA+TGG | + | chr1_2:24186063-24186082 | None:intergenic | 40.0% | |
| GAGCCCTATGTTAGTCAAAT+AGG | - | chr1_2:24186222-24186241 | Msa0063590:intron | 40.0% | |
| GGTGCCTATTTGACTAACAT+AGG | + | chr1_2:24186229-24186248 | None:intergenic | 40.0% | |
| AGTTTCACTAAGAAACCGGT+GGG | + | chr1_2:24186250-24186269 | None:intergenic | 40.0% | |
| TAGTGAAACTCATCAAGGTG+AGG | - | chr1_2:24186260-24186279 | Msa0063590:intron | 40.0% | |
| !!! | GCATCGCTTTTTGTCAGTTT+TGG | + | chr1_2:24186346-24186365 | None:intergenic | 40.0% |
| !!! | CTCCAAACGGTTTTAAGTGA+AGG | + | chr1_2:24186490-24186509 | None:intergenic | 40.0% |
| CTTCACTTAAAACCGTTTGG+AGG | - | chr1_2:24186488-24186507 | Msa0063590:intron | 40.0% | |
| ! | GTGTGGAGAAGAGTGATTTT+AGG | + | chr1_2:24186537-24186556 | None:intergenic | 40.0% |
| CTTCATCTCTTTATCCGCAA+AGG | - | chr1_2:24186609-24186628 | Msa0063590:intron | 40.0% | |
| ! | AGCACTGGAATCAACAACAT+AGG | + | chr1_2:24186971-24186990 | None:intergenic | 40.0% |
| TGGTTTGAATAGCTCAACAG+AGG | + | chr1_2:24187007-24187026 | None:intergenic | 40.0% | |
| ! | AAACCATCCTTTTCCGACAT+AGG | - | chr1_2:24187021-24187040 | Msa0063590:intron | 40.0% |
| TTTCCATCCTATGTCGGAAA+AGG | + | chr1_2:24187031-24187050 | None:intergenic | 40.0% | |
| TAGGGCCAAACAACATCAAA+TGG | - | chr1_2:24187131-24187150 | Msa0063590:intron | 40.0% | |
| AGGGCCAAACAACATCAAAT+GGG | - | chr1_2:24187132-24187151 | Msa0063590:intron | 40.0% | |
| CAACATCAAATGGGAGTAAC+AGG | - | chr1_2:24187141-24187160 | Msa0063590:intron | 40.0% | |
| TAGAGCTTGCAAAAAGACAC+CGG | - | chr1_2:24187170-24187189 | Msa0063590:intron | 40.0% | |
| AAGGATGGGTAAATGGGAAA+AGG | - | chr1_2:24187296-24187315 | Msa0063590:intron | 40.0% | |
| AAAAGGTCAAGGACTGAAGT+GGG | - | chr1_2:24187313-24187332 | Msa0063590:intron | 40.0% | |
| CTTGAGGTAACATTGGGAAA+AGG | - | chr1_2:24187400-24187419 | Msa0063590:intron | 40.0% | |
| CGTTGAACGCAATTCCATTT+AGG | + | chr1_2:24187503-24187522 | None:intergenic | 40.0% | |
| GTTGAAGCAGTTGGTCAATA+TGG | - | chr1_2:24187552-24187571 | Msa0063590:intron | 40.0% | |
| CAAAAGTCCTGAGGTTACAT+TGG | + | chr1_2:24187748-24187767 | None:intergenic | 40.0% | |
| CGCTACTTCAAGAAATATCG+AGG | + | chr1_2:24187863-24187882 | None:intergenic | 40.0% | |
| TAGGGCCAAACAACATCAAA+TGG | + | chr1_2:24187131-24187150 | None:intergenic | 40.0% | |
| !! | GTCTGATGGTGGAATTTCTA+GGG | + | chr1_2:24188039-24188058 | None:intergenic | 40.0% |
| !! | AGTCTGATGGTGGAATTTCT+AGG | + | chr1_2:24188040-24188059 | None:intergenic | 40.0% |
| TGTTTGATAGAGTCTGATGG+TGG | + | chr1_2:24188050-24188069 | None:intergenic | 40.0% | |
| AATTCCATCCTATGTCAGGA+AGG | - | chr1_2:24188120-24188139 | Msa0063590:intron | 40.0% | |
| ATTCCATCCTATGTCAGGAA+GGG | - | chr1_2:24188121-24188140 | Msa0063590:intron | 40.0% | |
| AACAAAACTCCCTTCCTGAA+AGG | - | chr1_2:24188324-24188343 | Msa0063590:intron | 40.0% | |
| ACAAAACTCCCTTCCTGAAA+GGG | - | chr1_2:24188325-24188344 | Msa0063590:intron | 40.0% | |
| TTGTTGTACGTACGATGAAG+AGG | - | chr1_2:24188504-24188523 | Msa0063590:intron | 40.0% | |
| ! | GATGGGAGAAGAGTGATTTT+AGG | - | chr1_2:24188542-24188561 | Msa0063590:intron | 40.0% |
| TTCACTTAAAGCCGTTTGGA+GGG | + | chr1_2:24188581-24188600 | None:intergenic | 40.0% | |
| !! | TCCAAACGGCTTTAAGTGAA+GGG | - | chr1_2:24188581-24188600 | Msa0063590:intron | 40.0% |
| GGATCCAAAATGAAGCAACT+GGG | - | chr1_2:24188757-24188776 | Msa0063590:intron | 40.0% | |
| GATCCAAAATGAAGCAACTG+GGG | - | chr1_2:24188758-24188777 | Msa0063590:intron | 40.0% | |
| ATCCAAAATGAAGCAACTGG+GGG | - | chr1_2:24188759-24188778 | Msa0063590:intron | 40.0% | |
| AATAGATAAGCTTCCTACGC+TGG | + | chr1_2:24188844-24188863 | None:intergenic | 40.0% | |
| CAGTTAGACTCATCCAATGA+TGG | - | chr1_2:24188911-24188930 | Msa0063590:CDS | 40.0% | |
| ACCTGATCTAGTGAGTGATA+CGG | + | chr1_2:24188997-24189016 | None:intergenic | 40.0% | |
| TCACTAGATCAGGTTACCTT+TGG | - | chr1_2:24189003-24189022 | Msa0063590:CDS | 40.0% | |
| TCCAACACCTTCATTGTGTT+GGG | - | chr1_2:24189251-24189270 | Msa0063590:intron | 40.0% | |
| CTTTACACCCAACACAATGA+AGG | + | chr1_2:24189261-24189280 | None:intergenic | 40.0% | |
| CTTCATTGTGTTGGGTGTAA+AGG | - | chr1_2:24189259-24189278 | Msa0063590:intron | 40.0% | |
| TCATTGTGTTGGGTGTAAAG+GGG | - | chr1_2:24189261-24189280 | Msa0063590:intron | 40.0% | |
| ATCTTCATTGTCACCTCTAC+AGG | + | chr1_2:24189413-24189432 | None:intergenic | 40.0% | |
| TGTAGAGGTGACAATGAAGA+TGG | - | chr1_2:24189412-24189431 | Msa0063590:intron | 40.0% | |
| ! | GATCACACTTTGTTCTGGAT+AGG | - | chr1_2:24189656-24189675 | Msa0063590:intron | 40.0% |
| ! | ATAGGAGTGGTTCTATCTTC+TGG | - | chr1_2:24189674-24189693 | Msa0063590:intron | 40.0% |
| AGATAGCTCCTTAGTTGTCA+AGG | - | chr1_2:24189918-24189937 | Msa0063590:intron | 40.0% | |
| AGTTGTCAAGGAAATCTTCG+GGG | - | chr1_2:24189930-24189949 | Msa0063590:intron | 40.0% | |
| CAGAGTATGCTCTCTATTCT+TGG | - | chr1_2:24189956-24189975 | Msa0063590:intron | 40.0% | |
| !! | ATACACACAACTTCTGAAGC+TGG | - | chr1_2:24190309-24190328 | Msa0063590:intron | 40.0% |
| CAATCTTCTCATGATCGACT+TGG | - | chr1_2:24190459-24190478 | Msa0063590:intron | 40.0% | |
| ACAATTCCAATGTGTAGAGC+AGG | - | chr1_2:24190533-24190552 | Msa0063590:CDS | 40.0% | |
| CAATTCCAATGTGTAGAGCA+GGG | - | chr1_2:24190534-24190553 | Msa0063590:CDS | 40.0% | |
| AAAAACCCTGCTCTACACAT+TGG | + | chr1_2:24190542-24190561 | None:intergenic | 40.0% | |
| ! | CATTTTCTCTAGTGTCCCAT+AGG | - | chr1_2:24190627-24190646 | Msa0063590:intron | 40.0% |
| ! | AGTGCTGTAGAGACACATTT+TGG | - | chr1_2:24190697-24190716 | Msa0063590:CDS | 40.0% |
| CATAAAATATGCAAGGTCCG+GGG | + | chr1_2:24190783-24190802 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | chr1_2:24190784-24190803 | None:intergenic | 40.0% | |
| !!! | GGTTTTTTTGGGTGGAGTCT+TGG | + | chr1_2:24181880-24181899 | None:intergenic | 45.0% |
| TGATGAGGATGCTGAAGCAA+CGG | + | chr1_2:24181935-24181954 | None:intergenic | 45.0% | |
| CTGAACCGGTGAATTCAACA+AGG | + | chr1_2:24182068-24182087 | None:intergenic | 45.0% | |
| ! | GTACTGACACACACTTCTGA+TGG | - | chr1_2:24182286-24182305 | Msa0063590:CDS | 45.0% |
| CTTCTGATGGAAGACGTGTT+CGG | - | chr1_2:24182299-24182318 | Msa0063590:CDS | 45.0% | |
| CACATGTGTCAATGTCACGT+CGG | + | chr1_2:24182332-24182351 | Msa0063600:CDS | 45.0% | |
| GTGGATGAGTTGTTGCAAAG+AGG | - | chr1_2:24182518-24182537 | Msa0063590:intron | 45.0% | |
| ! | CAATTTTACCAGTTGCGCCA+AGG | + | chr1_2:24182648-24182667 | None:intergenic | 45.0% |
| GTATTGTACGCAACCTTACC+CGG | + | chr1_2:24182731-24182750 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+GGG | - | chr1_2:24182740-24182759 | Msa0063590:CDS | 45.0% | |
| CGTACAATACACCAAATGGG+GGG | - | chr1_2:24182741-24182760 | Msa0063590:CDS | 45.0% | |
| !! | GGTCGCTGCTTGTTGTTTAA+TGG | - | chr1_2:24183065-24183084 | Msa0063590:intron | 45.0% |
| ! | GGCTCCTCTTTTTCTTTTGG+GGG | - | chr1_2:24183093-24183112 | Msa0063590:intron | 45.0% |
| !! | AGCTTTCTTTTTACCGGCTG+GGG | - | chr1_2:24183458-24183477 | Msa0063590:intron | 45.0% |
| ! | TCAATGAGATTTTCCCCAGC+CGG | + | chr1_2:24183474-24183493 | None:intergenic | 45.0% |
| GCTACAACATCAGGGTTGAA+TGG | + | chr1_2:24183652-24183671 | None:intergenic | 45.0% | |
| CGAAGAATTGTGCGAGACAA+AGG | - | chr1_2:24183745-24183764 | Msa0063590:intron | 45.0% | |
| TTGAACCATTAGGGTTGGGT+GGG | + | chr1_2:24184051-24184070 | None:intergenic | 45.0% | |
| TTTGAACCATTAGGGTTGGG+TGG | + | chr1_2:24184052-24184071 | None:intergenic | 45.0% | |
| CCTCGGTGGTACTAATGAAT+AGG | + | chr1_2:24184113-24184132 | None:intergenic | 45.0% | |
| CCTATTCATTAGTACCACCG+AGG | - | chr1_2:24184110-24184129 | Msa0063590:intron | 45.0% | |
| AGGAAATACTATTCCCTCGG+TGG | + | chr1_2:24184127-24184146 | None:intergenic | 45.0% | |
| GACCCTTCAATGTTACCCAA+AGG | + | chr1_2:24184147-24184166 | None:intergenic | 45.0% | |
| TGGGTAACATTGAAGGGTCT+TGG | - | chr1_2:24184148-24184167 | Msa0063590:intron | 45.0% | |
| TCAAACAGGCCCTAAGTGTT+TGG | + | chr1_2:24184227-24184246 | None:intergenic | 45.0% | |
| !! | GATATACAAGGTTGGCTTGG+TGG | - | chr1_2:24184743-24184762 | Msa0063590:intron | 45.0% |
| TGAGAAGTGGAGTGATTAGG+AGG | - | chr1_2:24184781-24184800 | Msa0063590:intron | 45.0% | |
| GAGAAGTGGAGTGATTAGGA+GGG | - | chr1_2:24184782-24184801 | Msa0063590:intron | 45.0% | |
| ! | AATAGCCTTGGACTTTGGCA+AGG | + | chr1_2:24184896-24184915 | Msa0063610:CDS | 45.0% |
| ! | GCATCAATAGCCTTGGACTT+TGG | + | chr1_2:24184901-24184920 | Msa0063610:CDS | 45.0% |
| ! | TTTTCTCAAAGAGGGGGAAG+GGG | + | chr1_2:24184944-24184963 | Msa0063610:CDS | 45.0% |
| ! | CTTTTCTCAAAGAGGGGGAA+GGG | + | chr1_2:24184945-24184964 | Msa0063610:CDS | 45.0% |
| ! | ACTTTTCTCAAAGAGGGGGA+AGG | + | chr1_2:24184946-24184965 | Msa0063610:CDS | 45.0% |
| GTATCAGAGTCTATCCTTGC+AGG | + | chr1_2:24185140-24185159 | None:intergenic | 45.0% | |
| ! | TTTAAGGCAGCCTGTGACAT+TGG | + | chr1_2:24185175-24185194 | None:intergenic | 45.0% |
| ATACCATACCACCAGTCCTA+TGG | - | chr1_2:24185981-24186000 | Msa0063590:intron | 45.0% | |
| CTAACCAGTAGAGAGTCACA+AGG | - | chr1_2:24186197-24186216 | Msa0063590:intron | 45.0% | |
| TTAGTCAAATAGGCACCCAC+CGG | - | chr1_2:24186232-24186251 | Msa0063590:intron | 45.0% | |
| GAGTTTCACTAAGAAACCGG+TGG | + | chr1_2:24186251-24186270 | None:intergenic | 45.0% | |
| TGAAACTCATCAAGGTGAGG+TGG | - | chr1_2:24186263-24186282 | Msa0063590:intron | 45.0% | |
| GAAACTCATCAAGGTGAGGT+GGG | - | chr1_2:24186264-24186283 | Msa0063590:intron | 45.0% | |
| GGTCAATAGAAGGTCAAAGC+AGG | - | chr1_2:24186430-24186449 | Msa0063590:intron | 45.0% | |
| ! | GGTCAAAGCAGGCACAATTT+TGG | - | chr1_2:24186441-24186460 | Msa0063590:intron | 45.0% |
| GCCCTTCACTTAAAACCGTT+TGG | - | chr1_2:24186485-24186504 | Msa0063590:intron | 45.0% | |
| TGATGAAGAGGTTGCCTTTG+CGG | + | chr1_2:24186626-24186645 | None:intergenic | 45.0% | |
| GGAAGCAACAAATTCAGCAC+TGG | + | chr1_2:24186986-24187005 | None:intergenic | 45.0% | |
| CATCCTATGTCGGAAAAGGA+TGG | + | chr1_2:24187027-24187046 | None:intergenic | 45.0% | |
| ! | CATCCTTTTCCGACATAGGA+TGG | - | chr1_2:24187025-24187044 | Msa0063590:intron | 45.0% |
| GGGTAAATGGGAAAAGGTCA+AGG | - | chr1_2:24187302-24187321 | Msa0063590:intron | 45.0% | |
| GAAAAGGTCAAGGACTGAAG+TGG | - | chr1_2:24187312-24187331 | Msa0063590:intron | 45.0% | |
| AAAGGTCAAGGACTGAAGTG+GGG | - | chr1_2:24187314-24187333 | Msa0063590:intron | 45.0% | |
| !! | GCCAAGAAGGGTACTACAAA+AGG | - | chr1_2:24187349-24187368 | Msa0063590:intron | 45.0% |
| ! | GCCTTTTGTAGTACCCTTCT+TGG | + | chr1_2:24187353-24187372 | None:intergenic | 45.0% |
| CCTGAGGTTACATTGGGAAA+AGG | + | chr1_2:24187741-24187760 | None:intergenic | 45.0% | |
| ! | CCTTTTCCCAATGTAACCTC+AGG | - | chr1_2:24187738-24187757 | Msa0063590:intron | 45.0% |
| AAAAGGCCAAGGACTGAAGT+GGG | + | chr1_2:24187828-24187847 | None:intergenic | 45.0% | |
| TGGTAAATGGGAAAAGGCCA+AGG | + | chr1_2:24187839-24187858 | None:intergenic | 45.0% | |
| CGAGGATGGTAAATGGGAAA+AGG | + | chr1_2:24187845-24187864 | None:intergenic | 45.0% | |
| TTGCAAAAAGACACCAGAGG+AGG | + | chr1_2:24187976-24187995 | None:intergenic | 45.0% | |
| AGCTTGCAAAAAGACACCAG+AGG | + | chr1_2:24187979-24187998 | None:intergenic | 45.0% | |
| AAACCATCCCTTCCTGACAT+AGG | + | chr1_2:24188131-24188150 | None:intergenic | 45.0% | |
| GGAAGCAACAGATTGAGCAT+TGG | - | chr1_2:24188166-24188185 | Msa0063590:intron | 45.0% | |
| ! | AGCATTGGAATCGACAGCAT+TGG | - | chr1_2:24188181-24188200 | Msa0063590:intron | 45.0% |
| AGGTTGTGAGTTGCTTCTGA+TGG | - | chr1_2:24188524-24188543 | Msa0063590:intron | 45.0% | |
| GGTTGTGAGTTGCTTCTGAT+GGG | - | chr1_2:24188525-24188544 | Msa0063590:intron | 45.0% | |
| CTTCACTTAAAGCCGTTTGG+AGG | + | chr1_2:24188582-24188601 | None:intergenic | 45.0% | |
| !! | CTCCAAACGGCTTTAAGTGA+AGG | - | chr1_2:24188580-24188599 | Msa0063590:intron | 45.0% |
| !! | GAGCGTTTGGAGAAAGCATT+GGG | + | chr1_2:24188649-24188668 | None:intergenic | 45.0% |
| GGGATCCAAAATGAAGCAAC+TGG | - | chr1_2:24188756-24188775 | Msa0063590:intron | 45.0% | |
| TATCATATCTTACCCCACCC+AGG | + | chr1_2:24188799-24188818 | None:intergenic | 45.0% | |
| AGCCGAAGATCTTCCATCAT+TGG | + | chr1_2:24188927-24188946 | None:intergenic | 45.0% | |
| CCTGATCTAGTGAGTGATAC+GGG | + | chr1_2:24188996-24189015 | None:intergenic | 45.0% | |
| ! | AAGGTAGAGTATCCCGTCTT+TGG | - | chr1_2:24189141-24189160 | Msa0063590:intron | 45.0% |
| ATGTCCAAACCACCAAAGAC+GGG | + | chr1_2:24189156-24189175 | None:intergenic | 45.0% | |
| CATGTCCAAACCACCAAAGA+CGG | + | chr1_2:24189157-24189176 | None:intergenic | 45.0% | |
| ! | CTTTGGTGGTTTGGACATGT+TGG | - | chr1_2:24189158-24189177 | Msa0063590:intron | 45.0% |
| !! | CTAGGGGTGGACTGTATTTA+AGG | + | chr1_2:24189192-24189211 | None:intergenic | 45.0% |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr1_2:24189252-24189271 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | chr1_2:24189250-24189269 | Msa0063590:intron | 45.0% | |
| ! | ACCCAACACAATGAAGGTGT+TGG | + | chr1_2:24189255-24189274 | None:intergenic | 45.0% |
| AGTGCTTATAAAGCTTGGGC+TGG | - | chr1_2:24189323-24189342 | Msa0063590:intron | 45.0% | |
| GGCCCAATTCATGTTTCAAG+AGG | - | chr1_2:24189371-24189390 | Msa0063590:intron | 45.0% | |
| ! | CACTTTGTTCTGGATAGGAG+TGG | - | chr1_2:24189661-24189680 | Msa0063590:intron | 45.0% |
| GGCAGCTGGAATCAGAATAA+CGG | + | chr1_2:24189883-24189902 | None:intergenic | 45.0% | |
| CCATCTTCTCAAGCGAATCT+AGG | + | chr1_2:24190338-24190357 | None:intergenic | 45.0% | |
| CCTAGATTCGCTTGAGAAGA+TGG | - | chr1_2:24190335-24190354 | Msa0063590:intron | 45.0% | |
| TAGTGAGGCTTCATGATGCT+TGG | - | chr1_2:24190383-24190402 | Msa0063590:intron | 45.0% | |
| TGCGTACTTCAGCTTTCTCT+TGG | - | chr1_2:24190586-24190605 | Msa0063590:CDS | 45.0% | |
| !! | GCTGTTAAAGACTGGCCTAT+GGG | + | chr1_2:24190645-24190664 | None:intergenic | 45.0% |
| !! | TGCTGTTAAAGACTGGCCTA+TGG | + | chr1_2:24190646-24190665 | None:intergenic | 45.0% |
| !!! | CGTTTTTTTTTGGTGGTGGC+CGG | - | chr1_2:24190749-24190768 | Msa0063590:CDS | 45.0% |
| !!! | GTTTTTTTTTGGTGGTGGCC+GGG | - | chr1_2:24190750-24190769 | Msa0063590:CDS | 45.0% |
| AGAATCCACGGCAACGAAGT+GGG | + | chr1_2:24182123-24182142 | Msa0063600:CDS | 50.0% | |
| GCTGTTCCGCTTGGTTATCT+AGG | - | chr1_2:24182144-24182163 | Msa0063590:three_prime_UTR | 50.0% | |
| AATTTACGGCGCTGCGCTTT+GGG | + | chr1_2:24182219-24182238 | Msa0063600:CDS | 50.0% | |
| TGCAATGCTGTGTAAGTCGG+TGG | - | chr1_2:24182499-24182518 | Msa0063590:intron | 50.0% | |
| TCAGATGGCCACATTTGCAC+AGG | + | chr1_2:24183538-24183557 | None:intergenic | 50.0% | |
| CCTCCAAACCAAAACCTGTC+TGG | + | chr1_2:24183588-24183607 | None:intergenic | 50.0% | |
| !!! | CCAGACAGGTTTTGGTTTGG+AGG | - | chr1_2:24183585-24183604 | Msa0063590:intron | 50.0% |
| !! | TACAAGGTTGGCTTGGTGGT+TGG | - | chr1_2:24184747-24184766 | Msa0063590:intron | 50.0% |
| !! | ACAAGGTTGGCTTGGTGGTT+GGG | - | chr1_2:24184748-24184767 | Msa0063590:intron | 50.0% |
| TGGAGTGATTAGGAGGGAGA+GGG | - | chr1_2:24184788-24184807 | Msa0063590:intron | 50.0% | |
| AGTCTCTGCTAGATCCGTAG+TGG | - | chr1_2:24184963-24184982 | Msa0063590:intron | 50.0% | |
| ! | TGTTCAGGCCCTCTTTGGAA+AGG | - | chr1_2:24185743-24185762 | Msa0063590:intron | 50.0% |
| ! | AAGCCATAGGACTGGTGGTA+TGG | + | chr1_2:24185987-24186006 | None:intergenic | 50.0% |
| TCTGCCTTGTGACTCTCTAC+TGG | + | chr1_2:24186204-24186223 | None:intergenic | 50.0% | |
| TTGTCAATAGTGGCCGCTAC+CGG | - | chr1_2:24186299-24186318 | Msa0063590:intron | 50.0% | |
| TTTGGAGAAAGCGGGTGAAG+CGG | - | chr1_2:24186385-24186404 | Msa0063590:intron | 50.0% | |
| AGCTTGCAAAAAGACACCGG+AGG | - | chr1_2:24187173-24187192 | Msa0063590:intron | 50.0% | |
| TTGCAAAAAGACACCGGAGG+AGG | - | chr1_2:24187176-24187195 | Msa0063590:intron | 50.0% | |
| ATGAGCAGTTTCACCTCCTC+CGG | + | chr1_2:24187192-24187211 | None:intergenic | 50.0% | |
| !! | GACTGAAGTGGGGAGTATTC+CGG | - | chr1_2:24187324-24187343 | Msa0063590:intron | 50.0% |
| AGTATTCCGGCTGCCAAGAA+GGG | - | chr1_2:24187337-24187356 | Msa0063590:intron | 50.0% | |
| GGGTACTACAAAAGGCCCAT+TGG | - | chr1_2:24187357-24187376 | Msa0063590:intron | 50.0% | |
| GGGTACTACAAAAGGCCCAT+TGG | + | chr1_2:24187357-24187376 | None:intergenic | 50.0% | |
| ! | GCCTTTTGTAGTACCCTGCT+TGG | - | chr1_2:24187788-24187807 | Msa0063590:intron | 50.0% |
| ! | GCCAAGCAGGGTACTACAAA+AGG | + | chr1_2:24187792-24187811 | None:intergenic | 50.0% |
| !! | GACTGAAGTGGGGAGTATTC+CGG | + | chr1_2:24187324-24187343 | None:intergenic | 50.0% |
| ATACTCCCCACTTCAGTCCT+TGG | - | chr1_2:24187819-24187838 | Msa0063590:intron | 50.0% | |
| AAAGGCCAAGGACTGAAGTG+GGG | + | chr1_2:24187827-24187846 | None:intergenic | 50.0% | |
| GAAAAGGCCAAGGACTGAAG+TGG | + | chr1_2:24187829-24187848 | None:intergenic | 50.0% | |
| CATCCCTTCCTGACATAGGA+TGG | + | chr1_2:24188127-24188146 | None:intergenic | 50.0% | |
| CATCCTATGTCAGGAAGGGA+TGG | - | chr1_2:24188125-24188144 | Msa0063590:intron | 50.0% | |
| GCCCTTCACTTAAAGCCGTT+TGG | + | chr1_2:24188585-24188604 | None:intergenic | 50.0% | |
| !! | CGTTTGGAGAAAGCATTGGG+TGG | + | chr1_2:24188646-24188665 | None:intergenic | 50.0% |
| ! | GGAGCGTTTGGAGAAAGCAT+TGG | + | chr1_2:24188650-24188669 | None:intergenic | 50.0% |
| ! | CACCCCCAGTTGCTTCATTT+TGG | + | chr1_2:24188764-24188783 | None:intergenic | 50.0% |
| CCCGTATCACTCACTAGATC+AGG | - | chr1_2:24188993-24189012 | Msa0063590:CDS | 50.0% | |
| ! | GTAGAGTATCCCGTCTTTGG+TGG | - | chr1_2:24189144-24189163 | Msa0063590:intron | 50.0% |
| ! | GTATCCCGTCTTTGGTGGTT+TGG | - | chr1_2:24189149-24189168 | Msa0063590:intron | 50.0% |
| ! | GCTGGCCTCACCTTACAAAT+TGG | - | chr1_2:24189341-24189360 | Msa0063590:intron | 50.0% |
| TGTGCGAAGAAGACCTGTAG+AGG | - | chr1_2:24189397-24189416 | Msa0063590:intron | 50.0% | |
| TTGAACAGAACTCTGGCAGC+TGG | + | chr1_2:24189897-24189916 | None:intergenic | 50.0% | |
| GTTGCTCAGCATCATCACTG+AGG | + | chr1_2:24190284-24190303 | None:intergenic | 50.0% | |
| TGAGCTTAGCTCAGCTGGTA+TGG | + | chr1_2:24190812-24190831 | None:intergenic | 50.0% | |
| AGCAATTCCTGGTCCACGAG+TGG | - | chr1_2:24182095-24182114 | Msa0063590:three_prime_UTR | 55.0% | |
| GCAATTCCTGGTCCACGAGT+GGG | - | chr1_2:24182096-24182115 | Msa0063590:three_prime_UTR | 55.0% | |
| GAGAATCCACGGCAACGAAG+TGG | + | chr1_2:24182124-24182143 | Msa0063600:CDS | 55.0% | |
| AGCGGAACAGCGAGAATCCA+CGG | + | chr1_2:24182135-24182154 | Msa0063600:CDS | 55.0% | |
| TGGATTCTCGCTGTTCCGCT+TGG | - | chr1_2:24182135-24182154 | Msa0063590:three_prime_UTR | 55.0% | |
| CAATTTACGGCGCTGCGCTT+TGG | + | chr1_2:24182220-24182239 | Msa0063600:CDS | 55.0% | |
| CAAAGCGCAGCGCCGTAAAT+TGG | - | chr1_2:24182218-24182237 | Msa0063590:three_prime_UTR | 55.0% | |
| !! | TGGAAGACGTGTTCGGTGTC+AGG | - | chr1_2:24182306-24182325 | Msa0063590:CDS | 55.0% |
| CATACGCATGGTCTGGGAAG+GGG | + | chr1_2:24182768-24182787 | None:intergenic | 55.0% | |
| GCATACGCATGGTCTGGGAA+GGG | + | chr1_2:24182769-24182788 | None:intergenic | 55.0% | |
| CTTCCCAGACCATGCGTATG+CGG | - | chr1_2:24182768-24182787 | Msa0063590:intron | 55.0% | |
| TTCCCAGACCATGCGTATGC+GGG | - | chr1_2:24182769-24182788 | Msa0063590:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+TGG | + | chr1_2:24182780-24182799 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr1_2:24182785-24182804 | Msa0063590:intron | 55.0% |
| !! | ATTAGGGTTGGGTGGGCTAG+TGG | + | chr1_2:24184044-24184063 | None:intergenic | 55.0% |
| ACTAGCCCACCCAACCCTAA+TGG | - | chr1_2:24184043-24184062 | Msa0063590:intron | 55.0% | |
| !! | CAAGGTTGGCTTGGTGGTTG+GGG | - | chr1_2:24184749-24184768 | Msa0063590:intron | 55.0% |
| GGGGTGGAGGAATTGAGAAG+TGG | - | chr1_2:24184768-24184787 | Msa0063590:intron | 55.0% | |
| GTGGAGTGATTAGGAGGGAG+AGG | - | chr1_2:24184787-24184806 | Msa0063590:intron | 55.0% | |
| TGCCACCTTGCCAAAGTCCA+AGG | - | chr1_2:24184888-24184907 | Msa0063590:intron | 55.0% | |
| AGCCTTGGACTTTGGCAAGG+TGG | + | chr1_2:24184893-24184912 | Msa0063610:CDS | 55.0% | |
| AAGGCTGCAGAATCCCTGCA+AGG | - | chr1_2:24185123-24185142 | Msa0063590:intron | 55.0% | |
| CTAGCTGTTCAGGCCCTCTT+TGG | - | chr1_2:24185738-24185757 | Msa0063590:intron | 55.0% | |
| AGCGATGCAGCGCTACAAAG+CGG | - | chr1_2:24186358-24186377 | Msa0063590:intron | 55.0% | |
| ! | AGCGGAGCGTTTGGAGAAAG+CGG | - | chr1_2:24186376-24186395 | Msa0063590:intron | 55.0% |
| TTGGAGAAAGCGGGTGAAGC+GGG | - | chr1_2:24186386-24186405 | Msa0063590:intron | 55.0% | |
| ! | GGTTGTGTTTTGCGGCTGTG+TGG | + | chr1_2:24186554-24186573 | None:intergenic | 55.0% |
| GAGTATTCCGGCTGCCAAGA+AGG | - | chr1_2:24187336-24187355 | Msa0063590:intron | 55.0% | |
| GTAGTACCCTTCTTGGCAGC+CGG | + | chr1_2:24187346-24187365 | None:intergenic | 55.0% | |
| AGTATTCCGGCTGCCAAGCA+GGG | + | chr1_2:24187804-24187823 | None:intergenic | 55.0% | |
| !! | GAGAAAGCATTGGGTGGAGC+GGG | + | chr1_2:24188640-24188659 | None:intergenic | 55.0% |
| !! | GGAGAAAGCATTGGGTGGAG+CGG | + | chr1_2:24188641-24188660 | None:intergenic | 55.0% |
| ! | TGTAGCGCTGCGTTGCGTTT+TGG | - | chr1_2:24188674-24188693 | Msa0063590:intron | 55.0% |
| GTCAATAGCGGTCGCTATCG+CGG | + | chr1_2:24188705-24188724 | None:intergenic | 55.0% | |
| GATATCAAGCGGCCTCATGC+AGG | - | chr1_2:24188815-24188834 | Msa0063590:intron | 55.0% | |
| ! | CTACGCTGGTTACCTGCATG+AGG | + | chr1_2:24188830-24188849 | None:intergenic | 55.0% |
| CTCATGCAGGTAACCAGCGT+AGG | - | chr1_2:24188828-24188847 | Msa0063590:intron | 55.0% | |
| ACCCAAACGCCACCATTAGG+CGG | + | chr1_2:24189215-24189234 | None:intergenic | 55.0% | |
| GCAACCCAAACGCCACCATT+AGG | + | chr1_2:24189218-24189237 | None:intergenic | 55.0% | |
| AACGAAGTGGGACCCACTCG+TGG | + | chr1_2:24182111-24182130 | Msa0063600:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr1_2:24182637-24182656 | Msa0063590:intron | 60.0% | |
| CGCATACGCATGGTCTGGGA+AGG | + | chr1_2:24182770-24182789 | None:intergenic | 60.0% | |
| CTCCCGCATACGCATGGTCT+GGG | + | chr1_2:24182774-24182793 | None:intergenic | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr1_2:24182786-24182805 | Msa0063590:intron | 60.0% |
| !! | GTGGGCTAGTGGAGTAGTGG+TGG | + | chr1_2:24184033-24184052 | None:intergenic | 60.0% |
| !! | TGGGTGGGCTAGTGGAGTAG+TGG | + | chr1_2:24184036-24184055 | None:intergenic | 60.0% |
| GGGGAAGGGGTTCAGTTGCA+TGG | + | chr1_2:24184931-24184950 | Msa0063610:CDS | 60.0% | |
| ACTCCATGCCGCGATAGCAC+CGG | + | chr1_2:24186321-24186340 | None:intergenic | 60.0% | |
| ! | GCGCTACAAAGCGGAGCGTT+TGG | - | chr1_2:24186367-24186386 | Msa0063590:intron | 60.0% |
| ! | GCGGAGCGTTTGGAGAAAGC+GGG | - | chr1_2:24186377-24186396 | Msa0063590:intron | 60.0% |
| !! | GGTGAAGCGGGTGCTATTGG+TGG | - | chr1_2:24186398-24186417 | Msa0063590:intron | 60.0% |
| !! | AGCGGGTGCTATTGGTGGAG+CGG | - | chr1_2:24186403-24186422 | Msa0063590:intron | 60.0% |
| ! | GTGCTATTGGTGGAGCGGAG+CGG | - | chr1_2:24186408-24186427 | Msa0063590:intron | 60.0% |
| TGCTATTGGTGGAGCGGAGC+GGG | - | chr1_2:24186409-24186428 | Msa0063590:intron | 60.0% | |
| GAGCGGAGCGGGTCAATAGA+AGG | - | chr1_2:24186420-24186439 | Msa0063590:intron | 60.0% | |
| GTAGTACCCTGCTTGGCAGC+CGG | - | chr1_2:24187795-24187814 | Msa0063590:intron | 60.0% | |
| GAGTATTCCGGCTGCCAAGC+AGG | + | chr1_2:24187805-24187824 | None:intergenic | 60.0% | |
| GGGTGGAGCGGGCACAATTT+GGG | + | chr1_2:24188629-24188648 | None:intergenic | 60.0% | |
| TGGGTGGAGCGGGCACAATT+TGG | + | chr1_2:24188630-24188649 | None:intergenic | 60.0% | |
| ! | GCGCTACAAAGCGGAGCGTT+TGG | + | chr1_2:24186367-24186386 | None:intergenic | 60.0% |
| CGCAACGCAGCGCTACAAAG+CGG | + | chr1_2:24188671-24188690 | None:intergenic | 60.0% | |
| TGAAGCAACTGGGGGTGACG+CGG | - | chr1_2:24188767-24188786 | Msa0063590:intron | 60.0% | |
| ACGCCACCATTAGGCGGCTA+GGG | + | chr1_2:24189209-24189228 | None:intergenic | 60.0% | |
| AACGCCACCATTAGGCGGCT+AGG | + | chr1_2:24189210-24189229 | None:intergenic | 60.0% | |
| ! | AGCCGCCTAATGGTGGCGTT+TGG | - | chr1_2:24189210-24189229 | Msa0063590:intron | 60.0% |
| ! | GCCGCCTAATGGTGGCGTTT+GGG | - | chr1_2:24189211-24189230 | Msa0063590:intron | 60.0% |
| AAGGTCCGGGGTTCGAATCC+CGG | + | chr1_2:24190771-24190790 | None:intergenic | 60.0% | |
| CCTCGTGAGCTTAGCTCAGC+TGG | + | chr1_2:24190817-24190836 | None:intergenic | 60.0% | |
| CCAGCTGAGCTAAGCTCACG+AGG | - | chr1_2:24190814-24190833 | Msa0063590:CDS | 60.0% | |
| TGGGTCCCACTTCGTTGCCG+TGG | - | chr1_2:24182115-24182134 | Msa0063590:three_prime_UTR | 65.0% | |
| TGGGAAGGGGTCCCCCCATT+TGG | + | chr1_2:24182755-24182774 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCATGGTC+TGG | + | chr1_2:24182775-24182794 | None:intergenic | 65.0% | |
| !! | GGTTGGCTTGGTGGTTGGGG+TGG | - | chr1_2:24184752-24184771 | Msa0063590:intron | 65.0% |
| !! | TGGCTTGGTGGTTGGGGTGG+AGG | - | chr1_2:24184755-24184774 | Msa0063590:intron | 65.0% |
| !! | TGCCGCGATAGCACCGGTAG+CGG | + | chr1_2:24186315-24186334 | None:intergenic | 65.0% |
| !! | CTACCGGTGCTATCGCGGCA+TGG | - | chr1_2:24186315-24186334 | Msa0063590:intron | 65.0% |
| ! | GGTGCTATCGCGGCATGGAG+TGG | - | chr1_2:24186320-24186339 | Msa0063590:intron | 65.0% |
| ! | GCGGGTGAAGCGGGTGCTAT+TGG | - | chr1_2:24186395-24186414 | Msa0063590:intron | 65.0% |
| GGGTGACGCGGAAGCAACCT+GGG | - | chr1_2:24188779-24188798 | Msa0063590:intron | 65.0% | |
| TGACGCGGAAGCAACCTGGG+TGG | - | chr1_2:24188782-24188801 | Msa0063590:intron | 65.0% | |
| GACGCGGAAGCAACCTGGGT+GGG | - | chr1_2:24188783-24188802 | Msa0063590:intron | 65.0% | |
| ACGCGGAAGCAACCTGGGTG+GGG | - | chr1_2:24188784-24188803 | Msa0063590:intron | 65.0% | |
| GTCCACCCCTAGCCGCCTAA+TGG | - | chr1_2:24189200-24189219 | Msa0063590:intron | 65.0% | |
| CACCATTAGGCGGCTAGGGG+TGG | + | chr1_2:24189205-24189224 | None:intergenic | 65.0% | |
| CACCCCTAGCCGCCTAATGG+TGG | - | chr1_2:24189203-24189222 | Msa0063590:intron | 65.0% | |
| CGCCACCATTAGGCGGCTAG+GGG | + | chr1_2:24189208-24189227 | None:intergenic | 65.0% | |
| GTGGGACCCACTCGTGGACC+AGG | + | chr1_2:24182105-24182124 | Msa0063600:CDS | 70.0% | |
| !! | GGCCGCTACCGGTGCTATCG+CGG | - | chr1_2:24186310-24186329 | Msa0063590:intron | 70.0% |
| TAGCGGTCGCTATCGCGGCG+CGG | + | chr1_2:24188700-24188719 | None:intergenic | 70.0% | |
| GGGGTGACGCGGAAGCAACC+TGG | - | chr1_2:24188778-24188797 | Msa0063590:intron | 70.0% | |
| GGTGGCCGGGATTCGAACCC+CGG | - | chr1_2:24190763-24190782 | Msa0063590:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 24181784 | 24190876 | 24181784 | ID=Msa0063590;Name=Msa0063590 |
| chr1_2 | mRNA | 24181784 | 24190876 | 24181784 | ID=Msa0063590-mRNA-1;Parent=Msa0063590;Name=Msa0063590-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.66|0.71|1|0.5|0.42|7|375|285 |
| chr1_2 | exon | 24181784 | 24181815 | 24181784 | ID=Msa0063590-mRNA-1:exon:8716;Parent=Msa0063590-mRNA-1 |
| chr1_2 | exon | 24181919 | 24182373 | 24181919 | ID=Msa0063590-mRNA-1:exon:8715;Parent=Msa0063590-mRNA-1 |
| chr1_2 | exon | 24182701 | 24182762 | 24182701 | ID=Msa0063590-mRNA-1:exon:8714;Parent=Msa0063590-mRNA-1 |
| chr1_2 | exon | 24186878 | 24186975 | 24186878 | ID=Msa0063590-mRNA-1:exon:8713;Parent=Msa0063590-mRNA-1 |
| chr1_2 | exon | 24188894 | 24189071 | 24188894 | ID=Msa0063590-mRNA-1:exon:8712;Parent=Msa0063590-mRNA-1 |
| chr1_2 | exon | 24190463 | 24190630 | 24190463 | ID=Msa0063590-mRNA-1:exon:8711;Parent=Msa0063590-mRNA-1 |
| chr1_2 | exon | 24190637 | 24190876 | 24190637 | ID=Msa0063590-mRNA-1:exon:8710;Parent=Msa0063590-mRNA-1 |
| chr1_2 | CDS | 24190637 | 24190876 | 24190637 | ID=Msa0063590-mRNA-1:cds;Parent=Msa0063590-mRNA-1 |
| chr1_2 | CDS | 24190463 | 24190630 | 24190463 | ID=Msa0063590-mRNA-1:cds;Parent=Msa0063590-mRNA-1 |
| chr1_2 | CDS | 24188894 | 24189071 | 24188894 | ID=Msa0063590-mRNA-1:cds;Parent=Msa0063590-mRNA-1 |
| chr1_2 | CDS | 24186878 | 24186975 | 24186878 | ID=Msa0063590-mRNA-1:cds;Parent=Msa0063590-mRNA-1 |
| chr1_2 | CDS | 24182701 | 24182762 | 24182701 | ID=Msa0063590-mRNA-1:cds;Parent=Msa0063590-mRNA-1 |
| chr1_2 | CDS | 24182262 | 24182373 | 24182262 | ID=Msa0063590-mRNA-1:cds;Parent=Msa0063590-mRNA-1 |
| chr1_2 | three_prime_UTR | 24181919 | 24182261 | 24181919 | ID=Msa0063590-mRNA-1:three_prime_utr;Parent=Msa0063590-mRNA-1 |
| chr1_2 | three_prime_UTR | 24181784 | 24181815 | 24181784 | ID=Msa0063590-mRNA-1:three_prime_utr;Parent=Msa0063590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
