Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101940 | ADV15621.1 | 95.862 | 290 | 10 | 1 | 1 | 288 | 1 | 290 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101940 | sp|O48722|HMOX2_ARATH | 59.375 | 256 | 92 | 1 | 45 | 288 | 44 | 299 | 2.53e-101 | 301 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101940 | E7ECB3 | 95.862 | 290 | 10 | 1 | 1 | 288 | 1 | 290 | 0.0 | 572 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008250 | Msa0101940 | 0.841716 | 4.012787e-58 | -8.615850e-47 |
| Msa0017980 | Msa0101940 | 0.820093 | 8.229246e-53 | -8.615850e-47 |
| Msa0018870 | Msa0101940 | 0.871466 | 6.689176e-67 | -8.615850e-47 |
| Msa0025340 | Msa0101940 | 0.805132 | 1.546821e-49 | -8.615850e-47 |
| Msa0030400 | Msa0101940 | 0.839685 | 1.366781e-57 | -8.615850e-47 |
| Msa0040410 | Msa0101940 | 0.800365 | 1.491402e-48 | -8.615850e-47 |
| Msa0046360 | Msa0101940 | 0.844511 | 7.224779e-59 | -8.615850e-47 |
| Msa0051600 | Msa0101940 | 0.907124 | 7.110907e-81 | -8.615850e-47 |
| Msa0053960 | Msa0101940 | 0.820176 | 7.877386e-53 | -8.615850e-47 |
| Msa0054760 | Msa0101940 | 0.802486 | 5.484628e-49 | -8.615850e-47 |
| Msa0055530 | Msa0101940 | 0.841988 | 3.401147e-58 | -8.615850e-47 |
| Msa0057340 | Msa0101940 | 0.803124 | 4.048519e-49 | -8.615850e-47 |
| Msa0062750 | Msa0101940 | 0.813739 | 2.197910e-51 | -8.615850e-47 |
| Msa0063590 | Msa0101940 | 0.825290 | 5.080405e-54 | -8.615850e-47 |
| Msa0065690 | Msa0101940 | 0.811313 | 7.451616e-51 | -8.615850e-47 |
| Msa0072710 | Msa0101940 | 0.800952 | 1.132103e-48 | -8.615850e-47 |
| Msa0072910 | Msa0101940 | 0.817791 | 2.744800e-52 | -8.615850e-47 |
| Msa0076550 | Msa0101940 | 0.809507 | 1.828596e-50 | -8.615850e-47 |
| Msa0092680 | Msa0101940 | 0.806015 | 1.010046e-49 | -8.615850e-47 |
| Msa0094700 | Msa0101940 | 0.812978 | 3.229203e-51 | -8.615850e-47 |
| Msa0097730 | Msa0101940 | 0.821356 | 4.217144e-53 | -8.615850e-47 |
| Msa0098960 | Msa0101940 | 0.810017 | 1.420377e-50 | -8.615850e-47 |
| Msa0101940 | Msa0112340 | 0.861006 | 1.388661e-63 | -8.615850e-47 |
| Msa0101940 | Msa0115950 | 0.810299 | 1.234877e-50 | -8.615850e-47 |
| Msa0101940 | Msa0116950 | 0.837753 | 4.315566e-57 | -8.615850e-47 |
| Msa0101940 | Msa0121080 | 0.852192 | 5.422367e-61 | -8.615850e-47 |
| Msa0101940 | Msa0127080 | 0.802037 | 6.785718e-49 | -8.615850e-47 |
| Msa0101940 | Msa0129270 | -0.807066 | 6.059564e-50 | -8.615850e-47 |
| Msa0101940 | Msa0130800 | 0.818429 | 1.969465e-52 | -8.615850e-47 |
| Msa0101940 | Msa0131390 | 0.808934 | 2.426032e-50 | -8.615850e-47 |
| Msa0101940 | Msa0132920 | 0.837519 | 4.956070e-57 | -8.615850e-47 |
| Msa0101940 | Msa0139050 | 0.804116 | 2.521281e-49 | -8.615850e-47 |
| Msa0101940 | Msa0144340 | 0.804938 | 1.699046e-49 | -8.615850e-47 |
| Msa0101940 | Msa0146110 | 0.918357 | 1.721958e-86 | -8.615850e-47 |
| Msa0101940 | Msa0147990 | 0.825165 | 5.439900e-54 | -8.615850e-47 |
| Msa0101940 | Msa0153640 | 0.821197 | 4.590146e-53 | -8.615850e-47 |
| Msa0101940 | Msa0160080 | 0.817987 | 2.479306e-52 | -8.615850e-47 |
| Msa0101940 | Msa0160470 | 0.814905 | 1.214060e-51 | -8.615850e-47 |
| Msa0101940 | Msa0164630 | 0.832668 | 8.291726e-56 | -8.615850e-47 |
| Msa0101940 | Msa0173610 | 0.806602 | 7.597496e-50 | -8.615850e-47 |
| Msa0101940 | Msa0173760 | 0.843953 | 1.020114e-58 | -8.615850e-47 |
| Msa0101940 | Msa0173850 | 0.832322 | 1.009825e-55 | -8.615850e-47 |
| Msa0101940 | Msa0176710 | 0.827536 | 1.481791e-54 | -8.615850e-47 |
| Msa0101940 | Msa0177490 | 0.806727 | 7.149717e-50 | -8.615850e-47 |
| Msa0101940 | Msa0177570 | 0.832021 | 1.198485e-55 | -8.615850e-47 |
| Msa0101940 | Msa0190400 | 0.804821 | 1.797043e-49 | -8.615850e-47 |
| Msa0101940 | Msa0190840 | 0.820357 | 7.157470e-53 | -8.615850e-47 |
| Msa0101940 | Msa0192710 | 0.832421 | 9.543580e-56 | -8.615850e-47 |
| Msa0101940 | Msa0197730 | 0.818805 | 1.617863e-52 | -8.615850e-47 |
| Msa0101940 | Msa0224960 | 0.813153 | 2.955975e-51 | -8.615850e-47 |
| Msa0101940 | Msa0225010 | 0.810182 | 1.308827e-50 | -8.615850e-47 |
| Msa0101940 | Msa0226800 | 0.817020 | 4.095071e-52 | -8.615850e-47 |
| Msa0101940 | Msa0239980 | 0.800924 | 1.147091e-48 | -8.615850e-47 |
| Msa0101940 | Msa0243160 | 0.825514 | 4.497834e-54 | -8.615850e-47 |
| Msa0101940 | Msa0244320 | 0.802026 | 6.821037e-49 | -8.615850e-47 |
| Msa0101940 | Msa0252160 | 0.819991 | 8.684864e-53 | -8.615850e-47 |
| Msa0101940 | Msa0258380 | 0.802322 | 5.927579e-49 | -8.615850e-47 |
| Msa0101940 | Msa0258410 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0101940 | Msa0269430 | 0.805342 | 1.398104e-49 | -8.615850e-47 |
| Msa0101940 | Msa0280500 | 0.803846 | 2.868684e-49 | -8.615850e-47 |
| Msa0101940 | Msa0282860 | 0.812748 | 3.626389e-51 | -8.615850e-47 |
| Msa0101940 | Msa0285740 | 0.808185 | 3.506123e-50 | -8.615850e-47 |
| Msa0101940 | Msa0288220 | 0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0101940 | Msa0290600 | 0.819979 | 8.738090e-53 | -8.615850e-47 |
| Msa0101940 | Msa0292150 | 0.837289 | 5.673516e-57 | -8.615850e-47 |
| Msa0101940 | Msa0296000 | 0.812677 | 3.758647e-51 | -8.615850e-47 |
| Msa0101940 | Msa0303950 | 0.810066 | 1.386284e-50 | -8.615850e-47 |
| Msa0101940 | Msa0305810 | 0.803376 | 3.591159e-49 | -8.615850e-47 |
| Msa0101940 | Msa0312780 | 0.824502 | 7.798067e-54 | -8.615850e-47 |
| Msa0101940 | Msa0314790 | 0.802802 | 4.720452e-49 | -8.615850e-47 |
| Msa0101940 | Msa0314980 | 0.800675 | 1.289535e-48 | -8.615850e-47 |
| Msa0101940 | Msa0317360 | 0.820940 | 5.260002e-53 | -8.615850e-47 |
| Msa0101940 | Msa0319720 | 0.839290 | 1.730985e-57 | -8.615850e-47 |
| Msa0101940 | Msa0333900 | 0.839274 | 1.747637e-57 | -8.615850e-47 |
| Msa0101940 | Msa0334020 | 0.838380 | 2.977066e-57 | -8.615850e-47 |
| Msa0101940 | Msa0335740 | 0.813629 | 2.323192e-51 | -8.615850e-47 |
| Msa0101940 | Msa0340440 | 0.833517 | 5.096205e-56 | -8.615850e-47 |
| Msa0101940 | Msa0352200 | 0.837996 | 3.736519e-57 | -8.615850e-47 |
| Msa0101940 | Msa0358720 | 0.802521 | 5.393866e-49 | -8.615850e-47 |
| Msa0101940 | Msa0362840 | 0.800828 | 1.199902e-48 | -8.615850e-47 |
| Msa0101940 | Msa0365350 | 0.807477 | 4.959631e-50 | -8.615850e-47 |
| Msa0101940 | Msa0367310 | 0.815395 | 9.449534e-52 | -8.615850e-47 |
| Msa0101940 | Msa0376900 | 0.802633 | 5.114026e-49 | -8.615850e-47 |
| Msa0101940 | Msa0380360 | 0.845108 | 4.987252e-59 | -8.615850e-47 |
| Msa0101940 | Msa0380420 | 0.802175 | 6.356345e-49 | -8.615850e-47 |
| Msa0101940 | Msa0381990 | 0.818895 | 1.543867e-52 | -8.615850e-47 |
| Msa0101940 | Msa0382500 | 0.815491 | 8.997730e-52 | -8.615850e-47 |
| Msa0101940 | Msa0383570 | 0.843835 | 1.097398e-58 | -8.615850e-47 |
| Msa0101940 | Msa0386390 | 0.820232 | 7.647076e-53 | -8.615850e-47 |
| Msa0101940 | Msa0387790 | 0.811912 | 5.522900e-51 | -8.615850e-47 |
| Msa0101940 | Msa0390840 | 0.803404 | 3.543282e-49 | -8.615850e-47 |
| Msa0101940 | Msa0397000 | 0.800510 | 1.393165e-48 | -8.615850e-47 |
| Msa0101940 | Msa0400900 | 0.825289 | 5.082867e-54 | -8.615850e-47 |
| Msa0101940 | Msa0416530 | 0.812484 | 4.142548e-51 | -8.615850e-47 |
| Msa0101940 | Msa0416540 | 0.806707 | 7.219192e-50 | -8.615850e-47 |
| Msa0101940 | Msa0420800 | 0.808296 | 3.320626e-50 | -8.615850e-47 |
| Msa0101940 | Msa0421100 | 0.831449 | 1.658508e-55 | -8.615850e-47 |
| Msa0101940 | Msa0421720 | 0.801756 | 7.746952e-49 | -8.615850e-47 |
| Msa0101940 | Msa0423600 | 0.801651 | 8.142669e-49 | -8.615850e-47 |
| Msa0101940 | Msa0423820 | 0.809971 | 1.453672e-50 | -8.615850e-47 |
| Msa0101940 | Msa0426480 | 0.809268 | 2.058075e-50 | -8.615850e-47 |
| Msa0101940 | Msa0432390 | 0.822218 | 2.665024e-53 | -8.615850e-47 |
| Msa0101940 | Msa0432680 | 0.814459 | 1.523982e-51 | -8.615850e-47 |
| Msa0101940 | Msa0438440 | 0.805953 | 1.040688e-49 | -8.615850e-47 |
| Msa0101940 | Msa0447830 | 0.819578 | 1.079328e-52 | -8.615850e-47 |
| Msa0101940 | Msa0455200 | 0.805505 | 1.292648e-49 | -8.615850e-47 |
| Msa0101940 | Msa0467080 | 0.835875 | 1.300730e-56 | -8.615850e-47 |
| Msa0101940 | Msa0471080 | 0.803034 | 4.227174e-49 | -8.615850e-47 |
| Msa0101940 | Msa0473010 | 0.803743 | 3.014004e-49 | -8.615850e-47 |
| Msa0101940 | Msa0475740 | 0.813674 | 2.271425e-51 | -8.615850e-47 |
| Msa0101940 | Msa0476490 | 0.801905 | 7.220847e-49 | -8.615850e-47 |
| Msa0101940 | Msa0479790 | 0.822775 | 1.977306e-53 | -8.615850e-47 |
| Msa0101940 | Msa0495510 | 0.815681 | 8.161754e-52 | -8.615850e-47 |
| Msa0101940 | Msa0498320 | 0.832755 | 7.888872e-56 | -8.615850e-47 |
| Msa0101940 | Msa0500490 | 0.802243 | 6.154775e-49 | -8.615850e-47 |
| Msa0101940 | Msa0512310 | 0.803543 | 3.315586e-49 | -8.615850e-47 |
| Msa0101940 | Msa0515730 | 0.801134 | 1.038979e-48 | -8.615850e-47 |
| Msa0101940 | Msa0515830 | 0.813378 | 2.638563e-51 | -8.615850e-47 |
| Msa0101940 | Msa0524510 | 0.800433 | 1.444760e-48 | -8.615850e-47 |
| Msa0101940 | Msa0525800 | 0.804090 | 2.552150e-49 | -8.615850e-47 |
| Msa0101940 | Msa0528740 | 0.829004 | 6.561557e-55 | -8.615850e-47 |
| Msa0101940 | Msa0534380 | 0.833288 | 5.811497e-56 | -8.615850e-47 |
| Msa0101940 | Msa0539900 | 0.819323 | 1.233548e-52 | -8.615850e-47 |
| Msa0101940 | Msa0544600 | 0.828132 | 1.065501e-54 | -8.615850e-47 |
| Msa0101940 | Msa0550110 | 0.804259 | 2.353867e-49 | -8.615850e-47 |
| Msa0101940 | Msa0553230 | 0.812429 | 4.259717e-51 | -8.615850e-47 |
| Msa0101940 | Msa0553350 | 0.801471 | 8.864653e-49 | -8.615850e-47 |
| Msa0101940 | Msa0554170 | 0.820817 | 5.612968e-53 | -8.615850e-47 |
| Msa0101940 | Msa0571250 | 0.804166 | 2.461696e-49 | -8.615850e-47 |
| Msa0101940 | Msa0573970 | 0.829705 | 4.432694e-55 | -8.615850e-47 |
| Msa0101940 | Msa0574170 | 0.814926 | 1.201505e-51 | -8.615850e-47 |
| Msa0101940 | Msa0576420 | 0.805384 | 1.370322e-49 | -8.615850e-47 |
| Msa0101940 | Msa0581190 | 0.813453 | 2.540193e-51 | -8.615850e-47 |
| Msa0101940 | Msa0581490 | 0.811932 | 5.467569e-51 | -8.615850e-47 |
| Msa0101940 | Msa0604700 | 0.818164 | 2.260836e-52 | -8.615850e-47 |
| Msa0101940 | Msa0607300 | 0.822932 | 1.817725e-53 | -8.615850e-47 |
| Msa0101940 | Msa0607440 | 0.821438 | 4.037457e-53 | -8.615850e-47 |
| Msa0101940 | Msa0618260 | 0.831199 | 1.911168e-55 | -8.615850e-47 |
| Msa0101940 | Msa0618490 | 0.811694 | 6.157898e-51 | -8.615850e-47 |
| Msa0101940 | Msa0622690 | 0.800423 | 1.451604e-48 | -8.615850e-47 |
| Msa0101940 | Msa0624700 | 0.805809 | 1.115577e-49 | -8.615850e-47 |
| Msa0101940 | Msa0633720 | 0.851181 | 1.049118e-60 | -8.615850e-47 |
| Msa0101940 | Msa0638500 | 0.804520 | 2.077091e-49 | -8.615850e-47 |
| Msa0101940 | Msa0645780 | 0.802909 | 4.485602e-49 | -8.615850e-47 |
| Msa0101940 | Msa0645820 | 0.826938 | 2.061399e-54 | -8.615850e-47 |
| Msa0101940 | Msa0646340 | 0.807089 | 5.993634e-50 | -8.615850e-47 |
| Msa0101940 | Msa0646570 | 0.808839 | 2.542201e-50 | -8.615850e-47 |
| Msa0101940 | Msa0650360 | 0.822597 | 2.175946e-53 | -8.615850e-47 |
| Msa0101940 | Msa0650860 | 0.814561 | 1.447280e-51 | -8.615850e-47 |
| Msa0101940 | Msa0657300 | 0.829299 | 5.562524e-55 | -8.615850e-47 |
| Msa0101940 | Msa0657820 | 0.855006 | 8.423930e-62 | -8.615850e-47 |
| Msa0101940 | Msa0658280 | 0.803923 | 2.765218e-49 | -8.615850e-47 |
| Msa0101940 | Msa0665040 | 0.835362 | 1.753451e-56 | -8.615850e-47 |
| Msa0101940 | Msa0668160 | 0.816068 | 6.691616e-52 | -8.615850e-47 |
| Msa0101940 | Msa0674960 | 0.802084 | 6.635802e-49 | -8.615850e-47 |
| Msa0101940 | Msa0688760 | 0.800029 | 1.745839e-48 | -8.615850e-47 |
| Msa0101940 | Msa0697180 | 0.802996 | 4.303892e-49 | -8.615850e-47 |
| Msa0101940 | Msa0707780 | 0.816352 | 5.781044e-52 | -8.615850e-47 |
| Msa0101940 | Msa0716600 | -0.815718 | 8.010222e-52 | -8.615850e-47 |
| Msa0101940 | Msa0728830 | 0.825017 | 5.893654e-54 | -8.615850e-47 |
| Msa0101940 | Msa0757990 | -0.807478 | 4.956434e-50 | -8.615850e-47 |
| Msa0101940 | Msa0758000 | -0.828844 | 7.173596e-55 | -8.615850e-47 |
| Msa0101940 | Msa0765190 | 0.814638 | 1.391248e-51 | -8.615850e-47 |
| Msa0101940 | Msa0776290 | 0.843520 | 1.332373e-58 | -8.615850e-47 |
| Msa0101940 | Msa0789800 | 0.805059 | 1.602758e-49 | -8.615850e-47 |
| Msa0101940 | Msa0791430 | 0.800136 | 1.660705e-48 | -8.615850e-47 |
| Msa0101940 | Msa0804340 | 0.827631 | 1.405890e-54 | -8.615850e-47 |
| Msa0101940 | Msa0824140 | 0.808901 | 2.466090e-50 | -8.615850e-47 |
| Msa0101940 | Msa0829430 | 0.823148 | 1.618610e-53 | -8.615850e-47 |
| Msa0101940 | Msa0829570 | 0.800717 | 1.264477e-48 | -8.615850e-47 |
| Msa0101940 | Msa0836200 | 0.806459 | 8.141383e-50 | -8.615850e-47 |
| Msa0101940 | Msa0838100 | 0.818529 | 1.869581e-52 | -8.615850e-47 |
| Msa0101940 | Msa0842270 | 0.821881 | 3.189419e-53 | -8.615850e-47 |
| Msa0101940 | Msa0846070 | 0.801444 | 8.978104e-49 | -8.615850e-47 |
| Msa0101940 | Msa0846180 | 0.804420 | 2.178714e-49 | -8.615850e-47 |
| Msa0101940 | Msa0868040 | 0.810449 | 1.146246e-50 | -8.615850e-47 |
| Msa0101940 | Msa0870010 | 0.800058 | 1.722334e-48 | -8.615850e-47 |
| Msa0101940 | Msa0875360 | 0.811229 | 7.772477e-51 | -8.615850e-47 |
| Msa0101940 | Msa0876030 | 0.802517 | 5.403654e-49 | -8.615850e-47 |
| Msa0101940 | Msa0884840 | 0.800369 | 1.488942e-48 | -8.615850e-47 |
| Msa0101940 | Msa0901140 | 0.829165 | 5.996961e-55 | -8.615850e-47 |
| Msa0101940 | Msa0906720 | 0.820345 | 7.203335e-53 | -8.615850e-47 |
| Msa0101940 | Msa0912110 | 0.815622 | 8.412953e-52 | -8.615850e-47 |
| Msa0101940 | Msa0926090 | 0.800986 | 1.114267e-48 | -8.615850e-47 |
| Msa0101940 | Msa0931730 | 0.824869 | 6.387435e-54 | -8.615850e-47 |
| Msa0101940 | Msa0938970 | 0.819921 | 9.010794e-53 | -8.615850e-47 |
| Msa0101940 | Msa0966410 | 0.863086 | 3.199437e-64 | -8.615850e-47 |
| Msa0101940 | Msa0968630 | 0.803166 | 3.969149e-49 | -8.615850e-47 |
| Msa0101940 | Msa0970050 | 0.806898 | 6.578752e-50 | -8.615850e-47 |
| Msa0101940 | Msa0975910 | 0.832897 | 7.273427e-56 | -8.615850e-47 |
| Msa0101940 | Msa0980980 | 0.817736 | 2.825216e-52 | -8.615850e-47 |
| Msa0101940 | Msa1001780 | 0.802543 | 5.336606e-49 | -8.615850e-47 |
| Msa0101940 | Msa1002980 | 0.805852 | 1.092701e-49 | -8.615850e-47 |
| Msa0101940 | Msa1011210 | 0.817831 | 2.689085e-52 | -8.615850e-47 |
| Msa0101940 | Msa1011240 | 0.809770 | 1.605299e-50 | -8.615850e-47 |
| Msa0101940 | Msa1017790 | 0.807550 | 4.785587e-50 | -8.615850e-47 |
| Msa0101940 | Msa1028460 | 0.805787 | 1.127879e-49 | -8.615850e-47 |
| Msa0101940 | Msa1028720 | 0.827725 | 1.334824e-54 | -8.615850e-47 |
| Msa0101940 | Msa1028780 | 0.855974 | 4.401345e-62 | -8.615850e-47 |
| Msa0101940 | Msa1029430 | 0.810387 | 1.182116e-50 | -8.615850e-47 |
| Msa0101940 | Msa1030430 | 0.806734 | 7.124367e-50 | -8.615850e-47 |
| Msa0101940 | Msa1030440 | 0.828102 | 1.083515e-54 | -8.615850e-47 |
| Msa0101940 | Msa1039860 | 0.805153 | 1.531449e-49 | -8.615850e-47 |
| Msa0101940 | Msa1040390 | 0.807259 | 5.516122e-50 | -8.615850e-47 |
| Msa0101940 | Msa1040730 | -0.800996 | 1.108996e-48 | -8.615850e-47 |
| Msa0101940 | Msa1052600 | 0.811392 | 7.164357e-51 | -8.615850e-47 |
| Msa0101940 | Msa1058980 | 0.845641 | 3.578184e-59 | -8.615850e-47 |
| Msa0101940 | Msa1061130 | 0.836233 | 1.054930e-56 | -8.615850e-47 |
| Msa0101940 | Msa1061520 | 0.808530 | 2.960828e-50 | -8.615850e-47 |
| Msa0101940 | Msa1067710 | 0.819798 | 9.611012e-53 | -8.615850e-47 |
| Msa0101940 | Msa1068110 | 0.813895 | 2.030842e-51 | -8.615850e-47 |
| Msa0101940 | Msa1068290 | 0.803122 | 4.053284e-49 | -8.615850e-47 |
| Msa0101940 | Msa1070930 | 0.809175 | 2.154231e-50 | -8.615850e-47 |
| Msa0101940 | Msa1081850 | 0.837914 | 3.922431e-57 | -8.615850e-47 |
| Msa0101940 | Msa1083140 | 0.818420 | 1.978309e-52 | -8.615850e-47 |
| Msa0101940 | Msa1084210 | 0.803891 | 2.807226e-49 | -8.615850e-47 |
| Msa0101940 | Msa1088690 | 0.822583 | 2.191384e-53 | -8.615850e-47 |
| Msa0101940 | Msa1093250 | 0.827407 | 1.591087e-54 | -8.615850e-47 |
| Msa0101940 | Msa1096280 | 0.836795 | 7.588619e-57 | -8.615850e-47 |
| Msa0101940 | Msa1108500 | 0.820848 | 5.521115e-53 | -8.615850e-47 |
| Msa0101940 | Msa1116010 | 0.804613 | 1.986087e-49 | -8.615850e-47 |
| Msa0101940 | Msa1120370 | 0.806206 | 9.205528e-50 | -8.615850e-47 |
| Msa0101940 | Msa1120660 | 0.807848 | 4.137226e-50 | -8.615850e-47 |
| Msa0101940 | Msa1122720 | 0.823471 | 1.360389e-53 | -8.615850e-47 |
| Msa0101940 | Msa1126910 | 0.825822 | 3.801258e-54 | -8.615850e-47 |
| Msa0101940 | Msa1130070 | 0.811580 | 6.520015e-51 | -8.615850e-47 |
| Msa0101940 | Msa1130650 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
| Msa0101940 | Msa1130730 | 0.814487 | 1.502628e-51 | -8.615850e-47 |
| Msa0101940 | Msa1132820 | 0.803377 | 3.588309e-49 | -8.615850e-47 |
| Msa0101940 | Msa1137800 | 0.801269 | 9.751781e-49 | -8.615850e-47 |
| Msa0101940 | Msa1145370 | 0.822861 | 1.888388e-53 | -8.615850e-47 |
| Msa0101940 | Msa1151120 | 0.844437 | 7.566024e-59 | -8.615850e-47 |
| Msa0101940 | Msa1151970 | 0.806000 | 1.017147e-49 | -8.615850e-47 |
| Msa0101940 | Msa1157030 | 0.845550 | 3.787562e-59 | -8.615850e-47 |
| Msa0101940 | Msa1161520 | 0.845432 | 4.077431e-59 | -8.615850e-47 |
| Msa0101940 | Msa1162470 | 0.803340 | 3.652289e-49 | -8.615850e-47 |
| Msa0101940 | Msa1166020 | 0.814090 | 1.838672e-51 | -8.615850e-47 |
| Msa0101940 | Msa1166280 | 0.803362 | 3.614271e-49 | -8.615850e-47 |
| Msa0101940 | Msa1178970 | 0.806214 | 9.170544e-50 | -8.615850e-47 |
| Msa0101940 | Msa1209650 | 0.802944 | 4.410968e-49 | -8.615850e-47 |
| Msa0101940 | Msa1221540 | 0.807451 | 5.023351e-50 | -8.615850e-47 |
| Msa0101940 | Msa1223600 | 0.817518 | 3.164302e-52 | -8.615850e-47 |
| Msa0101940 | Msa1233770 | 0.840827 | 6.879173e-58 | -8.615850e-47 |
| Msa0101940 | Msa1237750 | 0.828954 | 6.745997e-55 | -8.615850e-47 |
| Msa0101940 | Msa1244180 | 0.827802 | 1.279048e-54 | -8.615850e-47 |
| Msa0101940 | Msa1254990 | 0.831423 | 1.683556e-55 | -8.615850e-47 |
| Msa0101940 | Msa1258770 | 0.822645 | 2.120721e-53 | -8.615850e-47 |
| Msa0101940 | Msa1258940 | 0.811367 | 7.252623e-51 | -8.615850e-47 |
| Msa0101940 | Msa1264560 | 0.812265 | 4.624018e-51 | -8.615850e-47 |
| Msa0101940 | Msa1276080 | 0.853047 | 3.092948e-61 | -8.615850e-47 |
| Msa0101940 | Msa1279340 | 0.815763 | 7.825976e-52 | -8.615850e-47 |
| Msa0101940 | Msa1295220 | 0.810666 | 1.029252e-50 | -8.615850e-47 |
| Msa0101940 | Msa1298740 | 0.813878 | 2.048272e-51 | -8.615850e-47 |
| Msa0101940 | Msa1303130 | 0.810439 | 1.152349e-50 | -8.615850e-47 |
| Msa0101940 | Msa1308010 | 0.816252 | 6.086524e-52 | -8.615850e-47 |
| Msa0101940 | Msa1318180 | 0.805308 | 1.421217e-49 | -8.615850e-47 |
| Msa0101940 | Msa1319440 | 0.806182 | 9.312960e-50 | -8.615850e-47 |
| Msa0101940 | Msa1326000 | 0.808483 | 3.030046e-50 | -8.615850e-47 |
| Msa0101940 | Msa1329290 | 0.800548 | 1.368472e-48 | -8.615850e-47 |
| Msa0101940 | Msa1330280 | 0.804125 | 2.510522e-49 | -8.615850e-47 |
| Msa0101940 | Msa1334020 | 0.815169 | 1.060696e-51 | -8.615850e-47 |
| Msa0101940 | Msa1335210 | 0.813792 | 2.139637e-51 | -8.615850e-47 |
| Msa0101940 | Msa1344940 | 0.831810 | 1.351741e-55 | -8.615850e-47 |
| Msa0101940 | Msa1349640 | 0.807342 | 5.296146e-50 | -8.615850e-47 |
| Msa0101940 | Msa1353270 | 0.820179 | 7.861854e-53 | -8.615850e-47 |
| Msa0101940 | Msa1356460 | 0.809196 | 2.132309e-50 | -8.615850e-47 |
| Msa0101940 | Msa1356730 | 0.804533 | 2.064312e-49 | -8.615850e-47 |
| Msa0101940 | Msa1359620 | 0.817509 | 3.178809e-52 | -8.615850e-47 |
| Msa0101940 | Msa1361090 | 0.826475 | 2.658423e-54 | -8.615850e-47 |
| Msa0101940 | Msa1364850 | 0.805648 | 1.206104e-49 | -8.615850e-47 |
| Msa0101940 | Msa1366400 | 0.809872 | 1.526198e-50 | -8.615850e-47 |
| Msa0101940 | Msa1369390 | 0.801034 | 1.089037e-48 | -8.615850e-47 |
| Msa0101940 | Msa1369900 | 0.816908 | 4.338200e-52 | -8.615850e-47 |
| Msa0101940 | Msa1375630 | 0.802813 | 4.694526e-49 | -8.615850e-47 |
| Msa0101940 | Msa1388610 | 0.825993 | 3.461389e-54 | -8.615850e-47 |
| Msa0101940 | Msa1393550 | 0.830027 | 3.699729e-55 | -8.615850e-47 |
| Msa0101940 | Msa1393720 | 0.803638 | 3.168394e-49 | -8.615850e-47 |
| Msa0101940 | Msa1395640 | 0.820177 | 7.871118e-53 | -8.615850e-47 |
| Msa0101940 | Msa1396310 | 0.812794 | 3.543071e-51 | -8.615850e-47 |
| Msa0101940 | Msa1397110 | 0.802055 | 6.726911e-49 | -8.615850e-47 |
| Msa0101940 | Msa1403700 | 0.817346 | 3.458222e-52 | -8.615850e-47 |
| Msa0101940 | Msa1403900 | 0.818307 | 2.098787e-52 | -8.615850e-47 |
| Msa0101940 | Msa1408190 | 0.828250 | 9.977042e-55 | -8.615850e-47 |
| Msa0101940 | Msa1410170 | 0.808287 | 3.335903e-50 | -8.615850e-47 |
| Msa0101940 | Msa1416460 | 0.817212 | 3.706368e-52 | -8.615850e-47 |
| Msa0101940 | Msa1422500 | 0.800247 | 1.576044e-48 | -8.615850e-47 |
| Msa0101940 | Msa1423550 | 0.807136 | 5.855853e-50 | -8.615850e-47 |
| Msa0101940 | Msa1426310 | 0.830236 | 3.289627e-55 | -8.615850e-47 |
| Msa0101940 | Msa1426870 | 0.820598 | 6.301339e-53 | -8.615850e-47 |
| Msa0101940 | Msa1428990 | 0.824374 | 8.356755e-54 | -8.615850e-47 |
| Msa0101940 | Msa1435690 | 0.805511 | 1.288460e-49 | -8.615850e-47 |
| Msa0101940 | Msa1438780 | 0.801714 | 7.905351e-49 | -8.615850e-47 |
| Msa0101940 | Msa1448990 | 0.828743 | 7.587369e-55 | -8.615850e-47 |
| Msa0101940 | Msa1449510 | 0.817973 | 2.496907e-52 | -8.615850e-47 |
| Msa0101940 | Msa1449600 | 0.814391 | 1.577679e-51 | -8.615850e-47 |
| Msa0101940 | Msa1450420 | 0.811375 | 7.225602e-51 | -8.615850e-47 |
| Msa0101940 | Msa1451780 | 0.816968 | 4.206775e-52 | -8.615850e-47 |
| Msa0101940 | Msa1456830 | 0.804966 | 1.676329e-49 | -8.615850e-47 |
| Msa0101940 | Msa1458330 | 0.807774 | 4.288651e-50 | -8.615850e-47 |
| Msa0101940 | Msa1459590 | 0.801747 | 7.780136e-49 | -8.615850e-47 |
| Msa0101940 | Msa1460650 | 0.805429 | 1.340643e-49 | -8.615850e-47 |
| Msa0101940 | Msa1466170 | 0.800831 | 1.198252e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101940 | MtrunA17_Chr1g0153801 | 93.448 | 290 | 16 | 2 | 1 | 288 | 1 | 289 | 0.0 | 509 |
| Msa0101940 | MtrunA17_Chr2g0305941 | 48.869 | 221 | 108 | 2 | 67 | 287 | 65 | 280 | 1.09e-73 | 227 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101940 | AT2G26550.2 | 59.375 | 256 | 92 | 1 | 45 | 288 | 44 | 299 | 2.57e-102 | 301 |
| Msa0101940 | AT2G26550.3 | 56.089 | 271 | 92 | 2 | 45 | 288 | 44 | 314 | 3.54e-98 | 291 |
| Msa0101940 | AT2G26550.1 | 49.196 | 311 | 91 | 3 | 45 | 288 | 44 | 354 | 2.88e-89 | 270 |
| Msa0101940 | AT2G26550.4 | 59.524 | 210 | 73 | 1 | 61 | 258 | 60 | 269 | 2.80e-81 | 247 |
| Msa0101940 | AT2G26670.1 | 50.450 | 222 | 105 | 2 | 67 | 287 | 64 | 281 | 5.83e-80 | 243 |
| Msa0101940 | AT1G69720.1 | 51.131 | 221 | 105 | 2 | 67 | 287 | 67 | 284 | 4.35e-77 | 236 |
| Msa0101940 | AT1G69720.3 | 51.131 | 221 | 105 | 2 | 67 | 287 | 67 | 284 | 4.35e-77 | 236 |
| Msa0101940 | AT1G58300.1 | 42.205 | 263 | 134 | 3 | 26 | 287 | 37 | 282 | 1.19e-69 | 217 |
| Msa0101940 | AT2G26670.2 | 42.152 | 223 | 78 | 2 | 65 | 287 | 62 | 233 | 3.20e-59 | 189 |
| Msa0101940 | AT1G69720.2 | 47.826 | 161 | 81 | 2 | 67 | 227 | 67 | 224 | 3.43e-47 | 158 |
Find 99 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAAGTTCCTCTAAATATT+TGG | 0.110208 | 1_3:+8611888 | None:intergenic |
| AAGAAAATGATGACGCTTAT+AGG | 0.180424 | 1_3:-8609185 | Msa0101940:three_prime_UTR |
| GAGAATGATGATTCTTCTTC+TGG | 0.223274 | 1_3:+8613061 | None:intergenic |
| TTCTGTATTGTAGCTGTTCT+AGG | 0.224531 | 1_3:-8609111 | Msa0101940:three_prime_UTR |
| GAAAGGCTTTCTTCGATTCT+TGG | 0.256872 | 1_3:-8612796 | Msa0101940:CDS |
| CCTCATCTCTTCGGTGATTC+CGG | 0.265544 | 1_3:+8612929 | None:intergenic |
| GTTGTCACGCCTCACATTTA+TGG | 0.270091 | 1_3:-8609587 | Msa0101940:three_prime_UTR |
| CAAACTACAGAGAACTTAAA+TGG | 0.299562 | 1_3:+8609297 | None:intergenic |
| CTGAGGTGCTAATTGTAAAA+TGG | 0.313698 | 1_3:+8609147 | None:intergenic |
| CGAAGAAAGCCTTTCATAGA+AGG | 0.348541 | 1_3:+8612804 | None:intergenic |
| TAACCTGGCCCTGGCAGCTT+TGG | 0.349399 | 1_3:+8609548 | None:intergenic |
| GGGCCAGGTTACATCTGTTA+TGG | 0.369645 | 1_3:-8609536 | Msa0101940:three_prime_UTR |
| ACTCCAGCTCCTTACCTTCC+AGG | 0.374412 | 1_3:+8610329 | None:intergenic |
| GAACAATCTGTCCCATAAAC+TGG | 0.386716 | 1_3:+8610086 | None:intergenic |
| GTCTAGAGATGTGGCTTAGC+TGG | 0.391311 | 1_3:-8609444 | Msa0101940:three_prime_UTR |
| GATGCATACTTGAGGAAAAC+TGG | 0.393679 | 1_3:-8612006 | Msa0101940:CDS |
| GTGATTCCGGTGGTTTCACC+AGG | 0.410208 | 1_3:+8612942 | None:intergenic |
| TTTGTCGCTGTGGAGTTTCA+TGG | 0.410902 | 1_3:+8612899 | None:intergenic |
| AGAGTGCAAGTAGGAAATAA+TGG | 0.414114 | 1_3:+8609341 | None:intergenic |
| TACATATGCCAAATATTTAG+AGG | 0.415258 | 1_3:-8611896 | Msa0101940:CDS |
| ATAGAAGGATACCACGTGTC+AGG | 0.419281 | 1_3:+8612819 | None:intergenic |
| GAAACCGTTATATTCTACTT+TGG | 0.421202 | 1_3:+8609058 | None:intergenic |
| AAAATGGATATTGTAGAAAT+GGG | 0.422336 | 1_3:+8611840 | None:intergenic |
| TTCTTCTTCTTATCCACCGT+TGG | 0.435389 | 1_3:-8612997 | Msa0101940:CDS |
| CGAACGCATTGTTGATGATT+CGG | 0.450060 | 1_3:-8612745 | Msa0101940:CDS |
| ATTTGCCTTACTTATTGCTA+TGG | 0.459682 | 1_3:-8609513 | Msa0101940:three_prime_UTR |
| TGAAGATTTCTTTCTTATTG+TGG | 0.459734 | 1_3:-8609364 | Msa0101940:three_prime_UTR |
| TTTCCAAAGCTGCCAGGGCC+AGG | 0.463813 | 1_3:-8609551 | Msa0101940:three_prime_UTR |
| TTCTCATATAACTGCTGGCC+AGG | 0.466119 | 1_3:-8611818 | Msa0101940:CDS |
| TTAGGTATCTGAAAAGCTCC+TGG | 0.483336 | 1_3:-8610347 | Msa0101940:intron |
| ATTTGTGCAGCATTGGGGTC+GGG | 0.486709 | 1_3:-8610149 | Msa0101940:intron |
| AAGATTCTGCACTGTTCTTG+TGG | 0.491944 | 1_3:+8613211 | None:intergenic |
| AAAATCCATAGCAATAAGTA+AGG | 0.492889 | 1_3:+8609508 | None:intergenic |
| GGTGTTGAAGCGTGTTCGAT+TGG | 0.492898 | 1_3:+8613082 | None:intergenic |
| GAAGGATCTAGAATGGTTGA+AGG | 0.493575 | 1_3:-8611959 | Msa0101940:CDS |
| TATGTAGTACCAGGTGAACT+TGG | 0.493729 | 1_3:+8611913 | None:intergenic |
| AGTGTTGATGATGGTGGGAA+TGG | 0.502339 | 1_3:+8613107 | None:intergenic |
| AGGAGCTGGAGTTCTGCAAA+TGG | 0.505314 | 1_3:-8610318 | Msa0101940:CDS |
| AATTTGTGCAGCATTGGGGT+CGG | 0.511624 | 1_3:-8610150 | Msa0101940:intron |
| CCATGGTTGTTGCAGTTGAG+TGG | 0.513441 | 1_3:+8613133 | None:intergenic |
| ATAAGAAGAAGAAGATGAAG+AGG | 0.514379 | 1_3:+8613007 | None:intergenic |
| AATTACATGTGAAGTTTCTG+TGG | 0.514825 | 1_3:+8609236 | None:intergenic |
| TGAAAAGCTCCTGGAAGGTA+AGG | 0.515112 | 1_3:-8610338 | Msa0101940:CDS |
| AGTACCAGGTGAACTTGGAT+TGG | 0.517845 | 1_3:+8611918 | None:intergenic |
| CGTCTGATCATCTTATAAAG+AGG | 0.518449 | 1_3:-8610064 | Msa0101940:exon |
| GGCAACGAACCTCATCTCTT+CGG | 0.520653 | 1_3:+8612920 | None:intergenic |
| AACGAAATTGTCACTCCACC+TGG | 0.522060 | 1_3:+8609475 | None:intergenic |
| CAAATGGGAAGGAGATGTAC+AGG | 0.523655 | 1_3:-8610302 | Msa0101940:CDS |
| AGTGGTATTGTTGACGGTGT+TGG | 0.527238 | 1_3:+8612875 | None:intergenic |
| GTGTTGAAGCGTGTTCGATT+GGG | 0.527957 | 1_3:+8613083 | None:intergenic |
| AACAGAAGTGGTATTGTTGA+CGG | 0.534137 | 1_3:+8612869 | None:intergenic |
| CATCTCTTCGGTGATTCCGG+TGG | 0.534391 | 1_3:+8612932 | None:intergenic |
| AGATTCTGCACTGTTCTTGT+GGG | 0.535909 | 1_3:+8613212 | None:intergenic |
| TCAGTAATACTGCAATATCA+TGG | 0.537215 | 1_3:+8609384 | None:intergenic |
| GTACCAGGTGAACTTGGATT+GGG | 0.540943 | 1_3:+8611919 | None:intergenic |
| ATACTTGAGGAAAACTGGAT+TGG | 0.541626 | 1_3:-8612001 | Msa0101940:CDS |
| GGAGCTGGAGTTCTGCAAAT+GGG | 0.549742 | 1_3:-8610317 | Msa0101940:CDS |
| TTCATTAGAGTCTAGAGATG+TGG | 0.552909 | 1_3:-8609453 | Msa0101940:three_prime_UTR |
| TGGGAGCGTTAACTGTAGCT+TGG | 0.555696 | 1_3:-8609640 | Msa0101940:three_prime_UTR |
| CATGGTTGTTGCAGTTGAGT+GGG | 0.555894 | 1_3:+8613134 | None:intergenic |
| CTAGAATGGTTGAAGGAACA+AGG | 0.560120 | 1_3:-8611952 | Msa0101940:CDS |
| TAACAGATGTAACCTGGCCC+TGG | 0.562262 | 1_3:+8609539 | None:intergenic |
| ACTGGATTGGAAAGATCTGA+AGG | 0.563903 | 1_3:-8611988 | Msa0101940:CDS |
| GCTCCTGGAAGGTAAGGAGC+TGG | 0.564683 | 1_3:-8610332 | Msa0101940:CDS |
| GTCTTCTACTACAACAGAAG+TGG | 0.573939 | 1_3:+8612857 | None:intergenic |
| TTGGGAAGTGTTGATGATGG+TGG | 0.574296 | 1_3:+8613101 | None:intergenic |
| CTTTACCCTGGTGAAACCAC+CGG | 0.583875 | 1_3:-8612948 | Msa0101940:CDS |
| TGATCATCTTATAAAGAGGC+CGG | 0.584709 | 1_3:-8610060 | Msa0101940:exon |
| TGGCCAGGTTATTACAAAGC+AGG | 0.585011 | 1_3:-8611803 | Msa0101940:intron |
| ACGTGGTATCCTTCTATGAA+AGG | 0.586528 | 1_3:-8612813 | Msa0101940:CDS |
| CGATTGGGAAGTGTTGATGA+TGG | 0.589944 | 1_3:+8613098 | None:intergenic |
| GTACCTGCTTTGTAATAACC+TGG | 0.590707 | 1_3:+8611800 | None:intergenic |
| CAAATATTTAGAGGAACTTG+CGG | 0.593836 | 1_3:-8611887 | Msa0101940:CDS |
| GTATCTGAAAAGCTCCTGGA+AGG | 0.595672 | 1_3:-8610343 | Msa0101940:CDS |
| TGGGAAGTGTTGATGATGGT+GGG | 0.598542 | 1_3:+8613102 | None:intergenic |
| TAGAAGGATACCACGTGTCA+GGG | 0.599723 | 1_3:+8612820 | None:intergenic |
| CGCTATCGAAAACTTTACCC+TGG | 0.601205 | 1_3:-8612960 | Msa0101940:CDS |
| TATTTGGCATATGTAGTACC+AGG | 0.604625 | 1_3:+8611904 | None:intergenic |
| CTGGAGTTCTGCAAATGGGA+AGG | 0.610060 | 1_3:-8610313 | Msa0101940:CDS |
| TAGAAATGGGAAAGAAACAA+AGG | 0.614055 | 1_3:+8611853 | None:intergenic |
| AATCCATAACAGATGTAACC+TGG | 0.614119 | 1_3:+8609533 | None:intergenic |
| ATTGAATTGCCATAAATGTG+AGG | 0.616747 | 1_3:+8609578 | None:intergenic |
| GAATTGCAGATGCATACTTG+AGG | 0.618600 | 1_3:-8612014 | Msa0101940:intron |
| ACTCCCAATCCAAGTTCACC+TGG | 0.622116 | 1_3:-8611922 | Msa0101940:CDS |
| GTGTCGCTATGTAGGATAGG+GGG | 0.626884 | 1_3:-8609669 | Msa0101940:intron |
| CCACTCAACTGCAACAACCA+TGG | 0.631304 | 1_3:-8613133 | Msa0101940:CDS |
| TCATCTTATAAAGAGGCCGG+TGG | 0.633941 | 1_3:-8610057 | Msa0101940:exon |
| TTGTAATTTGTGCAGCATTG+GGG | 0.639959 | 1_3:-8610154 | Msa0101940:intron |
| CATCTTATAAAGAGGCCGGT+GGG | 0.641764 | 1_3:-8610056 | Msa0101940:exon |
| CCGGAATCACCGAAGAGATG+AGG | 0.642207 | 1_3:-8612929 | Msa0101940:CDS |
| AGTGTCGCTATGTAGGATAG+GGG | 0.644548 | 1_3:-8609670 | Msa0101940:intron |
| GAAGCTTAACGTGCTTGCAG+AGG | 0.660843 | 1_3:-8610257 | Msa0101940:intron |
| TGTCGCTATGTAGGATAGGG+GGG | 0.665338 | 1_3:-8609668 | Msa0101940:intron |
| TGATTCCGGTGGTTTCACCA+GGG | 0.673875 | 1_3:+8612943 | None:intergenic |
| AGCCACAAAAGAGTGCAAGT+AGG | 0.684845 | 1_3:+8609332 | None:intergenic |
| GTTGTAGTAGAAGACTGTGA+AGG | 0.688185 | 1_3:-8612849 | Msa0101940:CDS |
| AGAAATTACAGTAAAGACTG+AGG | 0.689610 | 1_3:+8609130 | None:intergenic |
| GATGGTGGGAATGGTAACCA+TGG | 0.718374 | 1_3:+8613116 | None:intergenic |
| AAGGACAAATCCCTGACACG+TGG | 0.718573 | 1_3:-8612830 | Msa0101940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTAAATTTTTTTAT+AGG | - | chr1_3:8611222-8611241 | Msa0101940:intron | 0.0% |
| !!! | TTTGAATGATTTTTTTTTTT+TGG | + | chr1_3:8610734-8610753 | None:intergenic | 10.0% |
| !! | TCATTCAAAAAAAAAAAAAT+TGG | - | chr1_3:8610745-8610764 | Msa0101940:intron | 10.0% |
| !!! | TCTTTATTTATTTTTAATCT+GGG | + | chr1_3:8611346-8611365 | None:intergenic | 10.0% |
| !!! | ATCTTTATTTATTTTTAATC+TGG | + | chr1_3:8611347-8611366 | None:intergenic | 10.0% |
| !! | TGTTAAATTAAAAAAAATCA+AGG | + | chr1_3:8611701-8611720 | None:intergenic | 10.0% |
| !! | TAACAAAATCAAAATCAAAT+TGG | + | chr1_3:8609939-8609958 | None:intergenic | 15.0% |
| !! | TAATAGTTGTTTATTCAAAT+AGG | - | chr1_3:8610193-8610212 | Msa0101940:intron | 15.0% |
| !! | AATAGTTGTTTATTCAAATA+GGG | - | chr1_3:8610194-8610213 | Msa0101940:intron | 15.0% |
| !!! | ATAAATTTCACAAATGTTTT+AGG | + | chr1_3:8610220-8610239 | None:intergenic | 15.0% |
| !!! | TATTTGATAGAATTTTTTGT+TGG | - | chr1_3:8611084-8611103 | Msa0101940:intron | 15.0% |
| !!! | ATTTGATAGAATTTTTTGTT+GGG | - | chr1_3:8611085-8611104 | Msa0101940:intron | 15.0% |
| !!! | TTTAATTTAACACAGATATT+AGG | - | chr1_3:8611709-8611728 | Msa0101940:intron | 15.0% |
| !! | TCTTTAATAAAGAATTCATT+AGG | + | chr1_3:8611863-8611882 | None:intergenic | 15.0% |
| !!! | TTATACTTATTATTTTTGTG+TGG | - | chr1_3:8612122-8612141 | Msa0101940:intron | 15.0% |
| !!! | ACTTTGAATTCATTAATTTG+AGG | - | chr1_3:8609651-8609670 | Msa0101940:three_prime_UTR | 20.0% |
| !!! | AATCAAATTGGTTTCATTTA+AGG | + | chr1_3:8609927-8609946 | None:intergenic | 20.0% |
| !!! | TCGCAAAATAACAAATTTTA+TGG | - | chr1_3:8610061-8610080 | Msa0101940:exon | 20.0% |
| !!! | TTGATTTGATTTAGTTATGA+TGG | - | chr1_3:8610242-8610261 | Msa0101940:intron | 20.0% |
| !! | AAAATGGATATTGTAGAAAT+GGG | + | chr1_3:8610462-8610481 | None:intergenic | 20.0% |
| !! | AAAAATGGATATTGTAGAAA+TGG | + | chr1_3:8610463-8610482 | None:intergenic | 20.0% |
| !! | AGCTAATTTAAACTTATATG+AGG | - | chr1_3:8610776-8610795 | Msa0101940:intron | 20.0% |
| !! | GATTTATTGTTTAACAATCA+AGG | - | chr1_3:8610798-8610817 | Msa0101940:intron | 20.0% |
| !!! | TTTTTTTTTAATCCTGATGA+CGG | - | chr1_3:8610943-8610962 | Msa0101940:intron | 20.0% |
| !! | ATAATGATAAAACACAAACA+CGG | + | chr1_3:8611195-8611214 | None:intergenic | 20.0% |
| !!! | TTTTTTATAGGTAAGTGAAA+CGG | - | chr1_3:8611234-8611253 | Msa0101940:intron | 20.0% |
| !!! | ATTTATTTTTAATCTGGGAA+TGG | + | chr1_3:8611341-8611360 | None:intergenic | 20.0% |
| !! | TAAAAAGTTAGTGATAAGAT+AGG | - | chr1_3:8611414-8611433 | Msa0101940:intron | 20.0% |
| !! | AAAAAGTTAGTGATAAGATA+GGG | - | chr1_3:8611415-8611434 | Msa0101940:intron | 20.0% |
| !!! | TTTTTCCATTTAAGCATTTT+GGG | + | chr1_3:8612461-8612480 | None:intergenic | 20.0% |
| !!! | ATTTTTCCATTTAAGCATTT+TGG | + | chr1_3:8612462-8612481 | None:intergenic | 20.0% |
| !!! | ACATTTGATTGCATTATTTT+TGG | - | chr1_3:8612540-8612559 | Msa0101940:intron | 20.0% |
| !! | CATGTAATTTATAAAAATGC+CGG | - | chr1_3:8613077-8613096 | Msa0101940:CDS | 20.0% |
| ! | TAAGTGTTTGTTTGGTTATA+TGG | - | chr1_3:8609616-8609635 | Msa0101940:three_prime_UTR | 25.0% |
| !!! | GTTTGTAGCTTATTTCTATA+AGG | - | chr1_3:8609871-8609890 | Msa0101940:intron | 25.0% |
| ! | TTGTGTAACAAAACACTTAT+AGG | - | chr1_3:8609996-8610015 | Msa0101940:intron | 25.0% |
| ! | ACAAAACACTTATAGGATAT+AGG | - | chr1_3:8610003-8610022 | Msa0101940:intron | 25.0% |
| !!! | ATGCTCATTGTTTTAAATTG+TGG | - | chr1_3:8610036-8610055 | Msa0101940:three_prime_UTR | 25.0% |
| ! | TTTCAATTATGGTTGTAGTT+AGG | + | chr1_3:8610149-8610168 | None:intergenic | 25.0% |
| !! | TAAGCAATGGTTTTCAATTA+TGG | + | chr1_3:8610160-8610179 | None:intergenic | 25.0% |
| ! | TACATATGCCAAATATTTAG+AGG | - | chr1_3:8610403-8610422 | Msa0101940:intron | 25.0% |
| ! | AAAGTTTCTTATAAGCATAC+AGG | - | chr1_3:8610596-8610615 | Msa0101940:intron | 25.0% |
| ! | AAGTTTCTTATAAGCATACA+GGG | - | chr1_3:8610597-8610616 | Msa0101940:intron | 25.0% |
| !!! | TTTTTTTTTGGCTTTCAAAC+CGG | + | chr1_3:8610722-8610741 | None:intergenic | 25.0% |
| !!! | TTTTTTTTAATCCTGATGAC+GGG | - | chr1_3:8610944-8610963 | Msa0101940:intron | 25.0% |
| !!! | ATTTTTTGTTGGGAAATATG+AGG | - | chr1_3:8611095-8611114 | Msa0101940:intron | 25.0% |
| ! | AAATGAATGAAGGAAATATG+TGG | - | chr1_3:8611158-8611177 | Msa0101940:intron | 25.0% |
| ! | GATATAAAGTATAAGGTAAG+GGG | + | chr1_3:8611274-8611293 | None:intergenic | 25.0% |
| ! | GGATATAAAGTATAAGGTAA+GGG | + | chr1_3:8611275-8611294 | None:intergenic | 25.0% |
| ! | AGGATATAAAGTATAAGGTA+AGG | + | chr1_3:8611276-8611295 | None:intergenic | 25.0% |
| ! | TACCTTATACTTTATATCCT+TGG | - | chr1_3:8611276-8611295 | Msa0101940:intron | 25.0% |
| ! | ACCTTATACTTTATATCCTT+GGG | - | chr1_3:8611277-8611296 | Msa0101940:intron | 25.0% |
| !!! | AAGAGTTGAAGTTTTAAGTT+TGG | - | chr1_3:8611522-8611541 | Msa0101940:intron | 25.0% |
| ! | GAATAATAACTCTTGAATGT+TGG | - | chr1_3:8611602-8611621 | Msa0101940:intron | 25.0% |
| ! | ACATTGTCTTTCCAATATTT+AGG | - | chr1_3:8611804-8611823 | Msa0101940:CDS | 25.0% |
| ! | CATTGTCTTTCCAATATTTA+GGG | - | chr1_3:8611805-8611824 | Msa0101940:CDS | 25.0% |
| ! | ATTGTCTTTCCAATATTTAG+GGG | - | chr1_3:8611806-8611825 | Msa0101940:CDS | 25.0% |
| ! | ATGCTTAAAGAAATTCTTGA+TGG | + | chr1_3:8611911-8611930 | None:intergenic | 25.0% |
| ! | TACTAGGAATTCTTTAATTG+TGG | - | chr1_3:8612070-8612089 | Msa0101940:intron | 25.0% |
| ! | AAAAAAGTCATTCCAGTTTA+TGG | - | chr1_3:8612201-8612220 | Msa0101940:intron | 25.0% |
| ! | AAAAAGTCATTCCAGTTTAT+GGG | - | chr1_3:8612202-8612221 | Msa0101940:intron | 25.0% |
| !!! | TAATAGCAGTGACTTTTTTA+TGG | - | chr1_3:8612282-8612301 | Msa0101940:intron | 25.0% |
| !!! | CTTCCTTTAACTTTTGAAAT+CGG | - | chr1_3:8612327-8612346 | Msa0101940:intron | 25.0% |
| !!! | ATTTTAATTGATAGAGGATC+AGG | - | chr1_3:8612352-8612371 | Msa0101940:intron | 25.0% |
| ! | ATGTAAGAAACTTGACAATA+GGG | + | chr1_3:8612524-8612543 | None:intergenic | 25.0% |
| ! | AATGTAAGAAACTTGACAAT+AGG | + | chr1_3:8612525-8612544 | None:intergenic | 25.0% |
| !! | ATATTTGCTGCAACAAAAAA+TGG | + | chr1_3:8612688-8612707 | None:intergenic | 25.0% |
| ! | AAAATCCATAGCAATAAGTA+AGG | + | chr1_3:8612794-8612813 | None:intergenic | 25.0% |
| !! | CTTATTGCTATGGATTTTAT+CGG | - | chr1_3:8612796-8612815 | Msa0101940:CDS | 25.0% |
| ! | TGAAGATTTCTTTCTTATTG+TGG | - | chr1_3:8612935-8612954 | Msa0101940:CDS | 25.0% |
| !!! | TAATTTTTGAGACATTTGGT+TGG | - | chr1_3:8613037-8613056 | Msa0101940:CDS | 25.0% |
| ATAAGAAGAAGAAGATGAAG+AGG | + | chr1_3:8609295-8609314 | None:intergenic | 30.0% | |
| GCAGTTATTAAGTGTTTGTT+TGG | - | chr1_3:8609608-8609627 | Msa0101940:three_prime_UTR | 30.0% | |
| !! | GCTTATTTCTATAAGGTATC+AGG | - | chr1_3:8609878-8609897 | Msa0101940:intron | 30.0% |
| ACACAATCATATAAGTGCTT+AGG | + | chr1_3:8609982-8610001 | None:intergenic | 30.0% | |
| ! | AAATTTTATGGTCTCTGCAA+TGG | - | chr1_3:8610073-8610092 | Msa0101940:CDS | 30.0% |
| ! | AAGATCTGAAGGAATTTTGA+AGG | - | chr1_3:8610322-8610341 | Msa0101940:CDS | 30.0% |
| !! | GAATTTTGAAGGATCTAGAA+TGG | - | chr1_3:8610333-8610352 | Msa0101940:CDS | 30.0% |
| CAAATATTTAGAGGAACTTG+CGG | - | chr1_3:8610412-8610431 | Msa0101940:intron | 30.0% | |
| TAGAAATGGGAAAGAAACAA+AGG | + | chr1_3:8610449-8610468 | None:intergenic | 30.0% | |
| CAGCAGTTATATGAGAAAAA+TGG | + | chr1_3:8610478-8610497 | None:intergenic | 30.0% | |
| ! | CATTTTTCTCATATAACTGC+TGG | - | chr1_3:8610476-8610495 | Msa0101940:intron | 30.0% |
| ! | ACTTTTCCCATCTCTTAAAA+GGG | - | chr1_3:8610525-8610544 | Msa0101940:intron | 30.0% |
| AAGGGAATCCAATCTATTTA+TGG | - | chr1_3:8610543-8610562 | Msa0101940:intron | 30.0% | |
| AGGGAATCCAATCTATTTAT+GGG | - | chr1_3:8610544-8610563 | Msa0101940:intron | 30.0% | |
| AGTTTCTTATAAGCATACAG+GGG | - | chr1_3:8610598-8610617 | Msa0101940:intron | 30.0% | |
| ATTGTTTAACAATCAAGGTG+TGG | - | chr1_3:8610803-8610822 | Msa0101940:intron | 30.0% | |
| ACTCTAGACATATGGTTAAA+GGG | + | chr1_3:8610850-8610869 | None:intergenic | 30.0% | |
| AACTCTAGACATATGGTTAA+AGG | + | chr1_3:8610851-8610870 | None:intergenic | 30.0% | |
| ! | AGATGTGCAATTTTTCTTGT+GGG | + | chr1_3:8611034-8611053 | None:intergenic | 30.0% |
| ! | TAGATGTGCAATTTTTCTTG+TGG | + | chr1_3:8611035-8611054 | None:intergenic | 30.0% |
| CCTTATACTTTATATCCTTG+GGG | - | chr1_3:8611278-8611297 | Msa0101940:intron | 30.0% | |
| ! | CTTTTTCTCAATCTCACTTA+TGG | + | chr1_3:8611443-8611462 | None:intergenic | 30.0% |
| ! | AATCACGAAGAATTTTGTGT+GGG | - | chr1_3:8611648-8611667 | Msa0101940:intron | 30.0% |
| !!! | ATTCTGTTGTTGTTGCTTTT+AGG | - | chr1_3:8611934-8611953 | Msa0101940:CDS | 30.0% |
| !! | TCACCGATTTCAAAAGTTAA+AGG | + | chr1_3:8612333-8612352 | None:intergenic | 30.0% |
| !!! | TCGGTGATTTTAATTGATAG+AGG | - | chr1_3:8612346-8612365 | Msa0101940:intron | 30.0% |
| !! | TATGTATGTCACTTTACGAT+TGG | + | chr1_3:8612424-8612443 | None:intergenic | 30.0% |
| !!! | TGATTGCATTATTTTTGGTC+TGG | - | chr1_3:8612545-8612564 | Msa0101940:intron | 30.0% |
| TGCAACTATAAATTGTGTAG+TGG | - | chr1_3:8612576-8612595 | Msa0101940:intron | 30.0% | |
| ATTGAATTGCCATAAATGTG+AGG | + | chr1_3:8612724-8612743 | None:intergenic | 30.0% | |
| ATTTGCCTTACTTATTGCTA+TGG | - | chr1_3:8612786-8612805 | Msa0101940:CDS | 30.0% | |
| TCAGTAATACTGCAATATCA+TGG | + | chr1_3:8612918-8612937 | None:intergenic | 30.0% | |
| CAAACTACAGAGAACTTAAA+TGG | + | chr1_3:8613005-8613024 | None:intergenic | 30.0% | |
| !!! | CGAGTAATTTTTGAGACATT+TGG | - | chr1_3:8613033-8613052 | Msa0101940:CDS | 30.0% |
| AATTACATGTGAAGTTTCTG+TGG | + | chr1_3:8613066-8613085 | None:intergenic | 30.0% | |
| ! | AAGAAAATGATGACGCTTAT+AGG | - | chr1_3:8613114-8613133 | Msa0101940:CDS | 30.0% |
| AGAAATTACAGTAAAGACTG+AGG | + | chr1_3:8613172-8613191 | None:intergenic | 30.0% | |
| GAGAATGATGATTCTTCTTC+TGG | + | chr1_3:8609241-8609260 | None:intergenic | 35.0% | |
| ! | TTTCTTTTTCTAACCAACGG+TGG | + | chr1_3:8609318-8609337 | None:intergenic | 35.0% |
| ! | CGGTTTCTTTTTCTAACCAA+CGG | + | chr1_3:8609321-8609340 | None:intergenic | 35.0% |
| AACAGAAGTGGTATTGTTGA+CGG | + | chr1_3:8609433-8609452 | None:intergenic | 35.0% | |
| AGGTTAAAAATAGCGTTTCG+AGG | - | chr1_3:8609671-8609690 | Msa0101940:intron | 35.0% | |
| AGAGCTTGTAGAATAAGCAA+TGG | + | chr1_3:8610173-8610192 | None:intergenic | 35.0% | |
| ATACTTGAGGAAAACTGGAT+TGG | - | chr1_3:8610298-8610317 | Msa0101940:CDS | 35.0% | |
| TATTTGGCATATGTAGTACC+AGG | + | chr1_3:8610398-8610417 | None:intergenic | 35.0% | |
| CGCAAGTTCCTCTAAATATT+TGG | + | chr1_3:8610414-8610433 | None:intergenic | 35.0% | |
| TTTAAGAGATGGGAAAAGTG+AGG | + | chr1_3:8610524-8610543 | None:intergenic | 35.0% | |
| ! | CACTTTTCCCATCTCTTAAA+AGG | - | chr1_3:8610524-8610543 | Msa0101940:intron | 35.0% |
| !! | TGGATTCCCTTTTAAGAGAT+GGG | + | chr1_3:8610534-8610553 | None:intergenic | 35.0% |
| !! | TTGGATTCCCTTTTAAGAGA+TGG | + | chr1_3:8610535-8610554 | None:intergenic | 35.0% |
| GGGAATCCAATCTATTTATG+GGG | - | chr1_3:8610545-8610564 | Msa0101940:intron | 35.0% | |
| AAAGCTCCCCATAAATAGAT+TGG | + | chr1_3:8610554-8610573 | None:intergenic | 35.0% | |
| GTTTCTTATAAGCATACAGG+GGG | - | chr1_3:8610599-8610618 | Msa0101940:intron | 35.0% | |
| ! | ATATGTCTAGAGTTCGAATC+CGG | - | chr1_3:8610857-8610876 | Msa0101940:intron | 35.0% |
| ATCTATGAGATTCGGATGAT+GGG | - | chr1_3:8610899-8610918 | Msa0101940:intron | 35.0% | |
| TTTCTTGTGGGTGTTTGATT+TGG | + | chr1_3:8611022-8611041 | None:intergenic | 35.0% | |
| GAAATATGAGGAACAAGAGA+AGG | - | chr1_3:8611107-8611126 | Msa0101940:intron | 35.0% | |
| GAACAAGAGTGAAGTAGAAT+GGG | - | chr1_3:8611129-8611148 | Msa0101940:intron | 35.0% | |
| CCCCAAGGATATAAAGTATA+AGG | + | chr1_3:8611281-8611300 | None:intergenic | 35.0% | |
| AGTCTTGAGGTTTAACTGTT+TGG | - | chr1_3:8611304-8611323 | Msa0101940:intron | 35.0% | |
| ! | GTAAGCTAAATCTTGAGTTG+TGG | + | chr1_3:8611498-8611517 | None:intergenic | 35.0% |
| CTTAAAACTTCAACTCTTCG+AGG | + | chr1_3:8611520-8611539 | None:intergenic | 35.0% | |
| TCTTGAATGTTGGATCAGTA+AGG | - | chr1_3:8611612-8611631 | Msa0101940:intron | 35.0% | |
| CTTGAATGTTGGATCAGTAA+GGG | - | chr1_3:8611613-8611632 | Msa0101940:intron | 35.0% | |
| ! | CAATCACGAAGAATTTTGTG+TGG | - | chr1_3:8611647-8611666 | Msa0101940:intron | 35.0% |
| AGATATTAGGAGAATGAGCA+AGG | - | chr1_3:8611722-8611741 | Msa0101940:intron | 35.0% | |
| AGAATGAGCAAGGTAATTGT+AGG | - | chr1_3:8611732-8611751 | Msa0101940:intron | 35.0% | |
| TCTTTCCAATATTTAGGGGT+GGG | - | chr1_3:8611810-8611829 | Msa0101940:CDS | 35.0% | |
| ! | GTTGTAATTTGTGCAGCATT+GGG | - | chr1_3:8612144-8612163 | Msa0101940:intron | 35.0% |
| ! | TTGTAATTTGTGCAGCATTG+GGG | - | chr1_3:8612145-8612164 | Msa0101940:intron | 35.0% |
| CGTCTGATCATCTTATAAAG+AGG | - | chr1_3:8612235-8612254 | Msa0101940:intron | 35.0% | |
| TGATCATCTTATAAAGAGGC+CGG | - | chr1_3:8612239-8612258 | Msa0101940:intron | 35.0% | |
| TAATTGATAGAGGATCAGGA+AGG | - | chr1_3:8612356-8612375 | Msa0101940:intron | 35.0% | |
| AATTGATAGAGGATCAGGAA+GGG | - | chr1_3:8612357-8612376 | Msa0101940:intron | 35.0% | |
| !! | TCCATTTAAGCATTTTGGGA+GGG | + | chr1_3:8612457-8612476 | None:intergenic | 35.0% |
| ! | TTCCATTTAAGCATTTTGGG+AGG | + | chr1_3:8612458-8612477 | None:intergenic | 35.0% |
| ! | ATAATTTTTCCAAAGCTGCC+AGG | - | chr1_3:8612742-8612761 | Msa0101940:CDS | 35.0% |
| ! | TAATTTTTCCAAAGCTGCCA+GGG | - | chr1_3:8612743-8612762 | Msa0101940:CDS | 35.0% |
| AATCCATAACAGATGTAACC+TGG | + | chr1_3:8612769-8612788 | None:intergenic | 35.0% | |
| TTCATTAGAGTCTAGAGATG+TGG | - | chr1_3:8612846-8612865 | Msa0101940:CDS | 35.0% | |
| AGAGTGCAAGTAGGAAATAA+TGG | + | chr1_3:8612961-8612980 | None:intergenic | 35.0% | |
| !! | TTCTTTTTGACTGAAAGCAC+CGG | + | chr1_3:8613099-8613118 | None:intergenic | 35.0% |
| ! | CTGAGGTGCTAATTGTAAAA+TGG | + | chr1_3:8613155-8613174 | None:intergenic | 35.0% |
| TTCTGTATTGTAGCTGTTCT+AGG | - | chr1_3:8613188-8613207 | Msa0101940:five_prime_UTR | 35.0% | |
| AGATTCTGCACTGTTCTTGT+GGG | + | chr1_3:8609090-8609109 | None:intergenic | 40.0% | |
| AAGATTCTGCACTGTTCTTG+TGG | + | chr1_3:8609091-8609110 | None:intergenic | 40.0% | |
| TTCTTCTTCTTATCCACCGT+TGG | - | chr1_3:8609302-8609321 | Msa0101940:three_prime_UTR | 40.0% | |
| ! | CAGGGTAAAGTTTTCGATAG+CGG | + | chr1_3:8609341-8609360 | None:intergenic | 40.0% |
| GTCTTCTACTACAACAGAAG+TGG | + | chr1_3:8609445-8609464 | None:intergenic | 40.0% | |
| GTTGTAGTAGAAGACTGTGA+AGG | - | chr1_3:8609450-8609469 | Msa0101940:three_prime_UTR | 40.0% | |
| ACGTGGTATCCTTCTATGAA+AGG | - | chr1_3:8609486-8609505 | Msa0101940:three_prime_UTR | 40.0% | |
| CGAAGAAAGCCTTTCATAGA+AGG | + | chr1_3:8609498-8609517 | None:intergenic | 40.0% | |
| GAAAGGCTTTCTTCGATTCT+TGG | - | chr1_3:8609503-8609522 | Msa0101940:three_prime_UTR | 40.0% | |
| !! | CGAACGCATTGTTGATGATT+CGG | - | chr1_3:8609554-8609573 | Msa0101940:three_prime_UTR | 40.0% |
| !! | AAGCACTTCTGAGACTGTTT+GGG | - | chr1_3:8609816-8609835 | Msa0101940:intron | 40.0% |
| GAATTGCAGATGCATACTTG+AGG | - | chr1_3:8610285-8610304 | Msa0101940:CDS | 40.0% | |
| GATGCATACTTGAGGAAAAC+TGG | - | chr1_3:8610293-8610312 | Msa0101940:CDS | 40.0% | |
| ! | ACTGGATTGGAAAGATCTGA+AGG | - | chr1_3:8610311-8610330 | Msa0101940:CDS | 40.0% |
| ! | GAAGGATCTAGAATGGTTGA+AGG | - | chr1_3:8610340-8610359 | Msa0101940:CDS | 40.0% |
| CTAGAATGGTTGAAGGAACA+AGG | - | chr1_3:8610347-8610366 | Msa0101940:intron | 40.0% | |
| TATGTAGTACCAGGTGAACT+TGG | + | chr1_3:8610389-8610408 | None:intergenic | 40.0% | |
| GTACCTGCTTTGTAATAACC+TGG | + | chr1_3:8610502-8610521 | None:intergenic | 40.0% | |
| GGATTCGAACTCTAGACATA+TGG | + | chr1_3:8610858-8610877 | None:intergenic | 40.0% | |
| GGAGATGCATCTATGAGATT+CGG | - | chr1_3:8610891-8610910 | Msa0101940:intron | 40.0% | |
| CATCTATGAGATTCGGATGA+TGG | - | chr1_3:8610898-8610917 | Msa0101940:intron | 40.0% | |
| !! | TTTAATCCTGATGACGGGAA+TGG | - | chr1_3:8610949-8610968 | Msa0101940:intron | 40.0% |
| GGAACAAGAGTGAAGTAGAA+TGG | - | chr1_3:8611128-8611147 | Msa0101940:intron | 40.0% | |
| AAGAGTGAAGTAGAATGGGA+AGG | - | chr1_3:8611133-8611152 | Msa0101940:intron | 40.0% | |
| AGAGTGAAGTAGAATGGGAA+GGG | - | chr1_3:8611134-8611153 | Msa0101940:intron | 40.0% | |
| TGGGAAGGGAAAATGAATGA+AGG | - | chr1_3:8611148-8611167 | Msa0101940:intron | 40.0% | |
| ! | TTAATCTGGGAATGGACTCA+TGG | + | chr1_3:8611333-8611352 | None:intergenic | 40.0% |
| GTCTTTCCAATATTTAGGGG+TGG | - | chr1_3:8611809-8611828 | Msa0101940:CDS | 40.0% | |
| GATTTCCCACCCCTAAATAT+TGG | + | chr1_3:8611818-8611837 | None:intergenic | 40.0% | |
| TCTGATTCAGAGTTCACTAC+AGG | + | chr1_3:8611840-8611859 | None:intergenic | 40.0% | |
| TTAGGTATCTGAAAAGCTCC+TGG | - | chr1_3:8611952-8611971 | Msa0101940:CDS | 40.0% | |
| ! | GGTTGTAATTTGTGCAGCAT+TGG | - | chr1_3:8612143-8612162 | Msa0101940:intron | 40.0% |
| GAACAATCTGTCCCATAAAC+TGG | + | chr1_3:8612216-8612235 | None:intergenic | 40.0% | |
| !! | ATTTAAGCATTTTGGGAGGG+GGG | + | chr1_3:8612454-8612473 | None:intergenic | 40.0% |
| !! | CATTTAAGCATTTTGGGAGG+GGG | + | chr1_3:8612455-8612474 | None:intergenic | 40.0% |
| !! | CCATTTAAGCATTTTGGGAG+GGG | + | chr1_3:8612456-8612475 | None:intergenic | 40.0% |
| !!! | GCGACACTCGAACATTTTTT+AGG | + | chr1_3:8612617-8612636 | None:intergenic | 40.0% |
| ! | TGGATTTTATCGGTATAGCC+AGG | - | chr1_3:8612806-8612825 | Msa0101940:CDS | 40.0% |
| ! | ATTTTATCGGTATAGCCAGG+TGG | - | chr1_3:8612809-8612828 | Msa0101940:CDS | 40.0% |
| ! | TTCCTACTTGCACTCTTTTG+TGG | - | chr1_3:8612965-8612984 | Msa0101940:CDS | 40.0% |
| CATGGTTGTTGCAGTTGAGT+GGG | + | chr1_3:8609168-8609187 | None:intergenic | 45.0% | |
| !! | AGTGTTGATGATGGTGGGAA+TGG | + | chr1_3:8609195-8609214 | None:intergenic | 45.0% |
| !! | TGGGAAGTGTTGATGATGGT+GGG | + | chr1_3:8609200-8609219 | None:intergenic | 45.0% |
| !! | TTGGGAAGTGTTGATGATGG+TGG | + | chr1_3:8609201-8609220 | None:intergenic | 45.0% |
| !! | CGATTGGGAAGTGTTGATGA+TGG | + | chr1_3:8609204-8609223 | None:intergenic | 45.0% |
| GTGTTGAAGCGTGTTCGATT+GGG | + | chr1_3:8609219-8609238 | None:intergenic | 45.0% | |
| CGCTATCGAAAACTTTACCC+TGG | - | chr1_3:8609339-8609358 | Msa0101940:three_prime_UTR | 45.0% | |
| TTTGTCGCTGTGGAGTTTCA+TGG | + | chr1_3:8609403-8609422 | None:intergenic | 45.0% | |
| AGTGGTATTGTTGACGGTGT+TGG | + | chr1_3:8609427-8609446 | None:intergenic | 45.0% | |
| TAGAAGGATACCACGTGTCA+GGG | + | chr1_3:8609482-8609501 | None:intergenic | 45.0% | |
| ATAGAAGGATACCACGTGTC+AGG | + | chr1_3:8609483-8609502 | None:intergenic | 45.0% | |
| !! | CAAGCACTTCTGAGACTGTT+TGG | - | chr1_3:8609815-8609834 | Msa0101940:intron | 45.0% |
| GGCTGATGAGGTTGAAATTG+CGG | + | chr1_3:8610107-8610126 | None:intergenic | 45.0% | |
| GTACCAGGTGAACTTGGATT+GGG | + | chr1_3:8610383-8610402 | None:intergenic | 45.0% | |
| AGTACCAGGTGAACTTGGAT+TGG | + | chr1_3:8610384-8610403 | None:intergenic | 45.0% | |
| TTCTCATATAACTGCTGGCC+AGG | - | chr1_3:8610481-8610500 | Msa0101940:intron | 45.0% | |
| TGGCCAGGTTATTACAAAGC+AGG | - | chr1_3:8610496-8610515 | Msa0101940:intron | 45.0% | |
| TAAGCATACAGGGGGAATAC+CGG | - | chr1_3:8610607-8610626 | Msa0101940:intron | 45.0% | |
| TTCCCAGGAGGAACAACATT+TGG | - | chr1_3:8610636-8610655 | Msa0101940:intron | 45.0% | |
| TAGAGTTCGAATCCGGATGA+TGG | - | chr1_3:8610864-8610883 | Msa0101940:intron | 45.0% | |
| AGAGTTCGAATCCGGATGAT+GGG | - | chr1_3:8610865-8610884 | Msa0101940:intron | 45.0% | |
| !! | TGAGATTCGGATGATGGGAA+TGG | - | chr1_3:8610904-8610923 | Msa0101940:intron | 45.0% |
| !! | ATCCTTGGGGATTAGTCTTG+AGG | - | chr1_3:8611291-8611310 | Msa0101940:intron | 45.0% |
| AACCTCAAGACTAATCCCCA+AGG | + | chr1_3:8611296-8611315 | None:intergenic | 45.0% | |
| GTATCTGAAAAGCTCCTGGA+AGG | - | chr1_3:8611956-8611975 | Msa0101940:CDS | 45.0% | |
| TGAAAAGCTCCTGGAAGGTA+AGG | - | chr1_3:8611961-8611980 | Msa0101940:CDS | 45.0% | |
| CAAATGGGAAGGAGATGTAC+AGG | - | chr1_3:8611997-8612016 | Msa0101940:CDS | 45.0% | |
| GCTTGCAGAGGTAGATTACT+AGG | - | chr1_3:8612054-8612073 | Msa0101940:intron | 45.0% | |
| ! | AATTTGTGCAGCATTGGGGT+CGG | - | chr1_3:8612149-8612168 | Msa0101940:intron | 45.0% |
| TCATCTTATAAAGAGGCCGG+TGG | - | chr1_3:8612242-8612261 | Msa0101940:intron | 45.0% | |
| CATCTTATAAAGAGGCCGGT+GGG | - | chr1_3:8612243-8612262 | Msa0101940:intron | 45.0% | |
| !! | TTTAAGCATTTTGGGAGGGG+GGG | + | chr1_3:8612453-8612472 | None:intergenic | 45.0% |
| CCCCTCCCAAAATGCTTAAA+TGG | - | chr1_3:8612453-8612472 | Msa0101940:intron | 45.0% | |
| ! | ATGTTCGAGTGTCGCTATGT+AGG | - | chr1_3:8612622-8612641 | Msa0101940:intron | 45.0% |
| ! | GAGTGTCGCTATGTAGGATA+GGG | - | chr1_3:8612628-8612647 | Msa0101940:intron | 45.0% |
| ! | AGTGTCGCTATGTAGGATAG+GGG | - | chr1_3:8612629-8612648 | Msa0101940:intron | 45.0% |
| GTTGTCACGCCTCACATTTA+TGG | - | chr1_3:8612712-8612731 | Msa0101940:intron | 45.0% | |
| AACGAAATTGTCACTCCACC+TGG | + | chr1_3:8612827-8612846 | None:intergenic | 45.0% | |
| ! | AGCCACAAAAGAGTGCAAGT+AGG | + | chr1_3:8612970-8612989 | None:intergenic | 45.0% |
| CCATGGTTGTTGCAGTTGAG+TGG | + | chr1_3:8609169-8609188 | None:intergenic | 50.0% | |
| CCACTCAACTGCAACAACCA+TGG | - | chr1_3:8609166-8609185 | Msa0101940:three_prime_UTR | 50.0% | |
| !! | GATGGTGGGAATGGTAACCA+TGG | + | chr1_3:8609186-8609205 | None:intergenic | 50.0% |
| ! | GGTGTTGAAGCGTGTTCGAT+TGG | + | chr1_3:8609220-8609239 | None:intergenic | 50.0% |
| CTTTACCCTGGTGAAACCAC+CGG | - | chr1_3:8609351-8609370 | Msa0101940:three_prime_UTR | 50.0% | |
| TGATTCCGGTGGTTTCACCA+GGG | + | chr1_3:8609359-8609378 | None:intergenic | 50.0% | |
| CCTCATCTCTTCGGTGATTC+CGG | + | chr1_3:8609373-8609392 | None:intergenic | 50.0% | |
| GGCAACGAACCTCATCTCTT+CGG | + | chr1_3:8609382-8609401 | None:intergenic | 50.0% | |
| AAGGACAAATCCCTGACACG+TGG | - | chr1_3:8609469-8609488 | Msa0101940:three_prime_UTR | 50.0% | |
| !! | AGTCTCAGAAGTGCTTGCGT+CGG | + | chr1_3:8609812-8609831 | None:intergenic | 50.0% |
| CCTTTGTATTGCGGCTGATG+AGG | + | chr1_3:8610119-8610138 | None:intergenic | 50.0% | |
| CCTCATCAGCCGCAATACAA+AGG | - | chr1_3:8610116-8610135 | Msa0101940:CDS | 50.0% | |
| GGCTGTGAGCCTTTGTATTG+CGG | + | chr1_3:8610128-8610147 | None:intergenic | 50.0% | |
| ACTCCCAATCCAAGTTCACC+TGG | - | chr1_3:8610377-8610396 | Msa0101940:intron | 50.0% | |
| AAGCATACAGGGGGAATACC+GGG | - | chr1_3:8610608-8610627 | Msa0101940:intron | 50.0% | |
| GGCCAAATGTTGTTCCTCCT+GGG | + | chr1_3:8610641-8610660 | None:intergenic | 50.0% | |
| TGGCCAAATGTTGTTCCTCC+TGG | + | chr1_3:8610642-8610661 | None:intergenic | 50.0% | |
| ATTAGTCGCCCACCATTGGT+GGG | - | chr1_3:8610689-8610708 | Msa0101940:intron | 50.0% | |
| !! | TCGAATCCGGATGATGGGAA+TGG | - | chr1_3:8610870-8610889 | Msa0101940:intron | 50.0% |
| GCATCTCCATTCCCATCATC+CGG | + | chr1_3:8610879-8610898 | None:intergenic | 50.0% | |
| AGGAGCTGGAGTTCTGCAAA+TGG | - | chr1_3:8611981-8612000 | Msa0101940:CDS | 50.0% | |
| GGAGCTGGAGTTCTGCAAAT+GGG | - | chr1_3:8611982-8612001 | Msa0101940:CDS | 50.0% | |
| CTGGAGTTCTGCAAATGGGA+AGG | - | chr1_3:8611986-8612005 | Msa0101940:CDS | 50.0% | |
| GAAGCTTAACGTGCTTGCAG+AGG | - | chr1_3:8612042-8612061 | Msa0101940:intron | 50.0% | |
| ! | ATTTGTGCAGCATTGGGGTC+GGG | - | chr1_3:8612150-8612169 | Msa0101940:intron | 50.0% |
| CCAAAAAACAGAGAGCCCAC+CGG | + | chr1_3:8612261-8612280 | None:intergenic | 50.0% | |
| ! | CGAGTGTCGCTATGTAGGAT+AGG | - | chr1_3:8612627-8612646 | Msa0101940:intron | 50.0% |
| ! | GTGTCGCTATGTAGGATAGG+GGG | - | chr1_3:8612630-8612649 | Msa0101940:intron | 50.0% |
| TGTCGCTATGTAGGATAGGG+GGG | - | chr1_3:8612631-8612650 | Msa0101940:intron | 50.0% | |
| !! | TGGGAGCGTTAACTGTAGCT+TGG | - | chr1_3:8612659-8612678 | Msa0101940:intron | 50.0% |
| TAACAGATGTAACCTGGCCC+TGG | + | chr1_3:8612763-8612782 | None:intergenic | 50.0% | |
| GGGCCAGGTTACATCTGTTA+TGG | - | chr1_3:8612763-8612782 | Msa0101940:CDS | 50.0% | |
| GTCTAGAGATGTGGCTTAGC+TGG | - | chr1_3:8612855-8612874 | Msa0101940:CDS | 50.0% | |
| GTGATTCCGGTGGTTTCACC+AGG | + | chr1_3:8609360-8609379 | None:intergenic | 55.0% | |
| CATCTCTTCGGTGATTCCGG+TGG | + | chr1_3:8609370-8609389 | None:intergenic | 55.0% | |
| CCGGAATCACCGAAGAGATG+AGG | - | chr1_3:8609370-8609389 | Msa0101940:three_prime_UTR | 55.0% | |
| !!! | CGGTGTTGGTTTTGTCGCTG+TGG | + | chr1_3:8609413-8609432 | None:intergenic | 55.0% |
| GAATACCGGGTTCGATTCCC+AGG | - | chr1_3:8610621-8610640 | Msa0101940:intron | 55.0% | |
| TTCCTCCTGGGAATCGAACC+CGG | + | chr1_3:8610629-8610648 | None:intergenic | 55.0% | |
| CTAATCCGGCTCATGCGTAG+AGG | + | chr1_3:8610674-8610693 | None:intergenic | 55.0% | |
| !! | CCAATGGTGGGCGACTAATC+CGG | + | chr1_3:8610688-8610707 | None:intergenic | 55.0% |
| ! | GATTAGTCGCCCACCATTGG+TGG | - | chr1_3:8610688-8610707 | Msa0101940:intron | 55.0% |
| GTTTCCGACCCACCAATGGT+GGG | + | chr1_3:8610700-8610719 | None:intergenic | 55.0% | |
| ! | ACCATTGGTGGGTCGGAAAC+CGG | - | chr1_3:8610700-8610719 | Msa0101940:intron | 55.0% |
| GCATCTCCATTCCCGTCATC+AGG | + | chr1_3:8610958-8610977 | None:intergenic | 55.0% | |
| ACTCCAGCTCCTTACCTTCC+AGG | + | chr1_3:8611973-8611992 | None:intergenic | 55.0% | |
| !!! | CCGGTGGGCTCTCTGTTTTT+TGG | - | chr1_3:8612258-8612277 | Msa0101940:intron | 55.0% |
| TGTAGGATAGGGGGGCAGTT+TGG | - | chr1_3:8612639-8612658 | Msa0101940:intron | 55.0% | |
| GTAGGATAGGGGGGCAGTTT+GGG | - | chr1_3:8612640-8612659 | Msa0101940:intron | 55.0% | |
| TACCGGGTTCGATTCCCAGG+AGG | - | chr1_3:8610624-8610643 | Msa0101940:intron | 60.0% | |
| ! | ATGCGTAGAGGCATGCGCAC+TGG | + | chr1_3:8610662-8610681 | None:intergenic | 60.0% |
| GCATGCCTCTACGCATGAGC+CGG | - | chr1_3:8610666-8610685 | Msa0101940:intron | 60.0% | |
| !! | CCGGATTAGTCGCCCACCAT+TGG | - | chr1_3:8610685-8610704 | Msa0101940:intron | 60.0% |
| GGTTTCCGACCCACCAATGG+TGG | + | chr1_3:8610701-8610720 | None:intergenic | 60.0% | |
| ! | ACCGGTTTCCGACCCACCAA+TGG | + | chr1_3:8610704-8610723 | None:intergenic | 60.0% |
| GCTCCTGGAAGGTAAGGAGC+TGG | - | chr1_3:8611967-8611986 | Msa0101940:CDS | 60.0% | |
| TTTCCAAAGCTGCCAGGGCC+AGG | - | chr1_3:8612748-8612767 | Msa0101940:CDS | 60.0% | |
| TAACCTGGCCCTGGCAGCTT+TGG | + | chr1_3:8612754-8612773 | None:intergenic | 60.0% | |
| ! | GTCGCCCACCATTGGTGGGT+CGG | - | chr1_3:8610693-8610712 | Msa0101940:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 8609065 | 8613256 | 8609065 | ID=Msa0101940;Name=Msa0101940 |
| chr1_3 | mRNA | 8609065 | 8613256 | 8609065 | ID=Msa0101940-mRNA-1;Parent=Msa0101940;Name=Msa0101940-mRNA-1;_AED=0.04;_eAED=0.04;_QI=82|1|1|1|0.75|0.6|5|664|288 |
| chr1_3 | exon | 8609065 | 8609677 | 8609065 | ID=Msa0101940-mRNA-1:exon:3477;Parent=Msa0101940-mRNA-1 |
| chr1_3 | exon | 8610018 | 8610161 | 8610018 | ID=Msa0101940-mRNA-1:exon:3476;Parent=Msa0101940-mRNA-1 |
| chr1_3 | exon | 8610258 | 8610365 | 8610258 | ID=Msa0101940-mRNA-1:exon:3475;Parent=Msa0101940-mRNA-1 |
| chr1_3 | exon | 8611804 | 8612027 | 8611804 | ID=Msa0101940-mRNA-1:exon:3474;Parent=Msa0101940-mRNA-1 |
| chr1_3 | exon | 8612733 | 8613256 | 8612733 | ID=Msa0101940-mRNA-1:exon:3473;Parent=Msa0101940-mRNA-1 |
| chr1_3 | five_prime_UTR | 8613175 | 8613256 | 8613175 | ID=Msa0101940-mRNA-1:five_prime_utr;Parent=Msa0101940-mRNA-1 |
| chr1_3 | CDS | 8612733 | 8613174 | 8612733 | ID=Msa0101940-mRNA-1:cds;Parent=Msa0101940-mRNA-1 |
| chr1_3 | CDS | 8611804 | 8612027 | 8611804 | ID=Msa0101940-mRNA-1:cds;Parent=Msa0101940-mRNA-1 |
| chr1_3 | CDS | 8610258 | 8610365 | 8610258 | ID=Msa0101940-mRNA-1:cds;Parent=Msa0101940-mRNA-1 |
| chr1_3 | CDS | 8610069 | 8610161 | 8610069 | ID=Msa0101940-mRNA-1:cds;Parent=Msa0101940-mRNA-1 |
| chr1_3 | three_prime_UTR | 8610018 | 8610068 | 8610018 | ID=Msa0101940-mRNA-1:three_prime_utr;Parent=Msa0101940-mRNA-1 |
| chr1_3 | three_prime_UTR | 8609065 | 8609677 | 8609065 | ID=Msa0101940-mRNA-1:three_prime_utr;Parent=Msa0101940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
