Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067500 | XP_013467381.1 | 97.580 | 785 | 19 | 0 | 75 | 859 | 1 | 785 | 0.0 | 1584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067500 | sp|Q9LXX6|SC15A_ARATH | 69.066 | 792 | 237 | 3 | 74 | 859 | 1 | 790 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067500 | A0A072VJ33 | 97.580 | 785 | 19 | 0 | 75 | 859 | 1 | 785 | 0.0 | 1584 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0067500 | Msa0711970 | 0.800705 | 1.271557e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067500 | MtrunA17_Chr1g0171311 | 97.580 | 785 | 19 | 0 | 75 | 859 | 1 | 785 | 0.0 | 1584 |
| Msa0067500 | MtrunA17_Chr1g0194921 | 69.625 | 800 | 232 | 5 | 69 | 859 | 16 | 813 | 0.0 | 1147 |
| Msa0067500 | MtrunA17_Chr7g0269441 | 47.407 | 810 | 387 | 9 | 78 | 859 | 5 | 803 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067500 | AT3G56640.1 | 69.066 | 792 | 237 | 3 | 74 | 859 | 1 | 790 | 0.0 | 1135 |
| Msa0067500 | AT4G02350.2 | 45.583 | 781 | 383 | 6 | 95 | 859 | 33 | 787 | 0.0 | 698 |
| Msa0067500 | AT4G02350.1 | 45.583 | 781 | 383 | 6 | 95 | 859 | 33 | 787 | 0.0 | 698 |
Find 195 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAATTCATTCAAATTTA+AGG | 0.117638 | 1_2:-32465990 | None:intergenic |
| GATTCTCCAGATGGGATATT+TGG | 0.196077 | 1_2:+32465767 | Msa0067500:CDS |
| TTGTTCGGACTTGTTTAATT+AGG | 0.200970 | 1_2:+32465967 | Msa0067500:three_prime_UTR |
| AGAGGAGCAGTTCTCCTTTA+TGG | 0.211668 | 1_2:+32464590 | Msa0067500:CDS |
| TTATGACTGCCGGTGTTAAT+TGG | 0.231440 | 1_2:+32465300 | Msa0067500:CDS |
| GCTGAGGAACAATATATTTC+AGG | 0.255826 | 1_2:+32464222 | Msa0067500:CDS |
| AGGATTATGTCACTCTGTTT+GGG | 0.257881 | 1_2:+32464640 | Msa0067500:CDS |
| GAAAGGTACCTGGTCGAAAA+TGG | 0.258553 | 1_2:-32463070 | None:intergenic |
| TCCGTAACACTTCTTCTCTT+TGG | 0.270638 | 1_2:-32463529 | None:intergenic |
| AAGGATTATGTCACTCTGTT+TGG | 0.278171 | 1_2:+32464639 | Msa0067500:CDS |
| ACTTCATGAATCCTGGTATA+AGG | 0.279524 | 1_2:+32465684 | Msa0067500:CDS |
| TAACACCTCAACACACTTCT+TGG | 0.279936 | 1_2:-32463902 | None:intergenic |
| GGTCGAAAATGGGGTTTGTT+TGG | 0.290438 | 1_2:-32463059 | None:intergenic |
| TGATGTTGTGAGGAAGTATT+TGG | 0.301076 | 1_2:+32465001 | Msa0067500:CDS |
| GGGGCTACTCTTAGACAATA+TGG | 0.302702 | 1_2:+32464660 | Msa0067500:CDS |
| TCAAATTGCTGGCTTCTTCA+TGG | 0.311975 | 1_2:+32464470 | Msa0067500:CDS |
| GTCGAAAATGGGGTTTGTTT+GGG | 0.331464 | 1_2:-32463058 | None:intergenic |
| AGGAGTTCTGCTAGAAATAT+CGG | 0.331928 | 1_2:+32464129 | Msa0067500:CDS |
| AAATATTCTTTCATTTGAAT+AGG | 0.332375 | 1_2:+32465877 | Msa0067500:three_prime_UTR |
| CCATTCTGATTTGTCTCCTC+AGG | 0.338976 | 1_2:-32465326 | None:intergenic |
| ATGATGTTGGTCCTCTTGTT+AGG | 0.341685 | 1_2:+32463593 | Msa0067500:CDS |
| CTTTGTTTACCATGTTCAAT+AGG | 0.343213 | 1_2:-32465265 | None:intergenic |
| AATATTCTTTCATTTGAATA+GGG | 0.344834 | 1_2:+32465878 | Msa0067500:three_prime_UTR |
| GTATTACTCAATACAATTAA+TGG | 0.346233 | 1_2:+32465053 | Msa0067500:CDS |
| ATCACCTTTGCACTTAAATC+TGG | 0.355159 | 1_2:-32465209 | None:intergenic |
| CTGCATTCAATACGTCAATA+AGG | 0.371814 | 1_2:-32465031 | None:intergenic |
| TGTTAGGCATGCCTTTGAAA+TGG | 0.373690 | 1_2:+32463609 | Msa0067500:CDS |
| ACGAATGGATGGTTCAAATA+AGG | 0.376588 | 1_2:+32464109 | Msa0067500:CDS |
| ACAGTTCTATTCTGCTGGTC+TGG | 0.377334 | 1_2:+32465574 | Msa0067500:CDS |
| ATCAACAGAGCCTTTGATAA+AGG | 0.378042 | 1_2:-32464940 | None:intergenic |
| GATTACTTATCTCATGGTAT+TGG | 0.382071 | 1_2:+32464960 | Msa0067500:CDS |
| TCACAGACAGCAGTACTGTT+TGG | 0.386187 | 1_2:-32462905 | None:intergenic |
| TGCCATCTGTGATAAATTCA+AGG | 0.387690 | 1_2:+32465745 | Msa0067500:CDS |
| TAAAATGACATCTGTGTTAG+AGG | 0.392956 | 1_2:+32464572 | Msa0067500:CDS |
| CATTCATTCATTCATTCATT+CGG | 0.395852 | 1_2:+32462964 | Msa0067500:CDS |
| CACAGACAGCAGTACTGTTT+GGG | 0.397035 | 1_2:-32462904 | None:intergenic |
| TGTAGTTGAAGGAAGGAAGT+AGG | 0.401019 | 1_2:+32462765 | None:intergenic |
| ATTAGTGTTTCTATATTGTT+CGG | 0.401254 | 1_2:+32465952 | Msa0067500:three_prime_UTR |
| CCTTAACCACAAAACTCATC+TGG | 0.405198 | 1_2:-32463654 | None:intergenic |
| GAACATCAACAGTTTGTTGC+CGG | 0.408299 | 1_2:-32464758 | None:intergenic |
| GAGGATTTGTCCCTTGCAAA+TGG | 0.411506 | 1_2:+32463568 | Msa0067500:CDS |
| GTTAGGCATGCCTTTGAAAT+GGG | 0.417673 | 1_2:+32463610 | Msa0067500:CDS |
| AGAAGAAGTGTTACGGAGAA+TGG | 0.418078 | 1_2:+32463535 | Msa0067500:CDS |
| CACATTGAGAAGAATGTTTG+CGG | 0.419635 | 1_2:+32464078 | Msa0067500:CDS |
| GAAAGCAGCCACTAGAGAAC+TGG | 0.420473 | 1_2:-32465465 | None:intergenic |
| ATCTGGCGAAGAAGCCCCTC+TGG | 0.428907 | 1_2:-32463637 | None:intergenic |
| CTTCATGAATCCTGGTATAA+GGG | 0.429853 | 1_2:+32465685 | Msa0067500:CDS |
| AGGGGTAAAATTTGTTGTGC+TGG | 0.436072 | 1_2:-32465398 | None:intergenic |
| TGCTGGCTTCTTCATGGTTG+AGG | 0.436246 | 1_2:+32464476 | Msa0067500:CDS |
| AGAATCTTCGTCAAATTCTT+CGG | 0.437081 | 1_2:-32464274 | None:intergenic |
| TTGCGAATGTGTGTCGGGTT+GGG | 0.437097 | 1_2:+32462870 | Msa0067500:exon |
| CGCATTTGCGAATGTGTGTC+GGG | 0.447158 | 1_2:+32462865 | Msa0067500:exon |
| CAACAAACTGTTGATGTTCT+CGG | 0.449798 | 1_2:+32464762 | Msa0067500:CDS |
| AACTCTGTGCATGGCATCGA+GGG | 0.450177 | 1_2:-32465417 | None:intergenic |
| GTCTGGTAAGATTCAACAAA+AGG | 0.453362 | 1_2:-32464438 | None:intergenic |
| AATATCGGGCAAACAGCAAT+TGG | 0.454039 | 1_2:+32464144 | Msa0067500:CDS |
| AAAGGTACCTGGTCGAAAAT+GGG | 0.454943 | 1_2:-32463069 | None:intergenic |
| TCTAGGGATTCATGTGATCA+TGG | 0.455365 | 1_2:+32463498 | Msa0067500:intron |
| GCAAGGGATGCCACATAGTT+GGG | 0.456841 | 1_2:-32465165 | None:intergenic |
| GCTCTTCAAGCTTGACAAGA+AGG | 0.458450 | 1_2:-32463828 | None:intergenic |
| AGGCTTCCAAATATCCCATC+TGG | 0.459405 | 1_2:-32465773 | None:intergenic |
| GGAGAAAAGTTACTATGCAT+TGG | 0.461116 | 1_2:+32465706 | Msa0067500:CDS |
| GAGGAGAATGGTGCAACATA+TGG | 0.463704 | 1_2:-32464885 | None:intergenic |
| CAGTTCTATTCTGCTGGTCT+GGG | 0.464232 | 1_2:+32465575 | Msa0067500:CDS |
| ATCCTTGAATTTATCACAGA+TGG | 0.464740 | 1_2:-32465747 | None:intergenic |
| GGGCTACTCTTAGACAATAT+GGG | 0.465026 | 1_2:+32464661 | Msa0067500:CDS |
| GGCAAGGGATGCCACATAGT+TGG | 0.468607 | 1_2:-32465166 | None:intergenic |
| GCGCATTTGCGAATGTGTGT+CGG | 0.469656 | 1_2:+32462864 | Msa0067500:exon |
| ATGTGTGGCCGACTCCATAA+AGG | 0.477880 | 1_2:-32464604 | None:intergenic |
| GAACAATATATTTCAGGAGC+AGG | 0.478659 | 1_2:+32464228 | Msa0067500:CDS |
| TCGATGCCATGCACAGAGTT+GGG | 0.478801 | 1_2:+32465420 | Msa0067500:CDS |
| CTTGCTGTCGATGAGCTTCG+TGG | 0.479390 | 1_2:+32463730 | Msa0067500:CDS |
| AAATTTGAATGAATTTCTCA+TGG | 0.480494 | 1_2:+32465994 | Msa0067500:three_prime_UTR |
| GGCATTCTTCCAACAGAAGC+TGG | 0.481790 | 1_2:-32464737 | None:intergenic |
| CTCGATGCCATGCACAGAGT+TGG | 0.483799 | 1_2:+32465419 | Msa0067500:CDS |
| TACAGGAATTCTTCTCTCTA+CGG | 0.485568 | 1_2:-32464046 | None:intergenic |
| TTTCAACTTGATCAGCTACC+AGG | 0.486624 | 1_2:-32464527 | None:intergenic |
| CAGAACTGCCGGGGTCCTCC+TGG | 0.489563 | 1_2:+32464509 | Msa0067500:CDS |
| TGCTGTCTGTGAGTGCTGCT+AGG | 0.493082 | 1_2:+32462916 | Msa0067500:CDS |
| GAGTTAAAGAGTCAACTTCA+TGG | 0.494766 | 1_2:+32463772 | Msa0067500:CDS |
| GCTGTCTGTGAGTGCTGCTA+GGG | 0.496537 | 1_2:+32462917 | Msa0067500:CDS |
| GTTGAGGTGTTAGAGCTTTG+CGG | 0.497469 | 1_2:+32463913 | Msa0067500:CDS |
| GAAAATGGGGTTTGTTTGGG+TGG | 0.499858 | 1_2:-32463055 | None:intergenic |
| GATAGAGTCCTCAGAACTGC+CGG | 0.500554 | 1_2:+32464498 | Msa0067500:CDS |
| TTTGACGAACTGTTGCAATA+CGG | 0.507034 | 1_2:-32464167 | None:intergenic |
| CTTTGAAATGGGACGGCCAG+AGG | 0.507915 | 1_2:+32463621 | Msa0067500:CDS |
| TTTGCGAATGTGTGTCGGGT+TGG | 0.510284 | 1_2:+32462869 | Msa0067500:exon |
| TCTCTAGTGATAGTGTCAAA+AGG | 0.510767 | 1_2:+32465486 | Msa0067500:CDS |
| AGGATTTGTCCCTTGCAAAT+GGG | 0.511180 | 1_2:+32463569 | Msa0067500:CDS |
| GTCGGCCACACATCTTCTCC+TGG | 0.511813 | 1_2:+32464614 | Msa0067500:CDS |
| GTTGTGCTGAAGATATTTCA+AGG | 0.513956 | 1_2:-32464416 | None:intergenic |
| GCTGAGAACTTCATGAATCC+TGG | 0.514543 | 1_2:+32465677 | Msa0067500:CDS |
| ACCAAAGAGAAGAAGTGTTA+CGG | 0.515422 | 1_2:+32463528 | Msa0067500:CDS |
| CCTTCAGAGTATTCCTCTGA+AGG | 0.515784 | 1_2:+32464011 | Msa0067500:CDS |
| GGCCTTTCAATTGATCGGCA+AGG | 0.518074 | 1_2:-32465182 | None:intergenic |
| CTATGCATTGGATTACAAGA+AGG | 0.518554 | 1_2:+32465718 | Msa0067500:CDS |
| GATGAACAGTTCTATTCTGC+TGG | 0.518652 | 1_2:+32465569 | Msa0067500:CDS |
| GCCTTTCAATTGATCGGCAA+GGG | 0.519139 | 1_2:-32465181 | None:intergenic |
| CTGGGAGAAATTTACAATGA+AGG | 0.520108 | 1_2:+32465593 | Msa0067500:CDS |
| CGGTCAAGTTAACGAATGGA+TGG | 0.520437 | 1_2:+32464098 | Msa0067500:CDS |
| GGTGCAACATATGGAAAAGC+AGG | 0.523673 | 1_2:-32464876 | None:intergenic |
| CTCTGGCCGTCCCATTTCAA+AGG | 0.524280 | 1_2:-32463620 | None:intergenic |
| TTCATTCATTCATTCGGCAA+CGG | 0.525038 | 1_2:+32462970 | Msa0067500:CDS |
| GCTGAGGCCTTTCAATTGAT+CGG | 0.527520 | 1_2:-32465187 | None:intergenic |
| TCTGTTGATTACTTATCTCA+TGG | 0.527782 | 1_2:+32464954 | Msa0067500:CDS |
| GGAGTTCTGCTAGAAATATC+GGG | 0.528250 | 1_2:+32464130 | Msa0067500:CDS |
| GCATATTTCCAGTTCTCTAG+TGG | 0.529819 | 1_2:+32465457 | Msa0067500:CDS |
| GAAGTACCACCAGCTTCTGT+TGG | 0.532948 | 1_2:+32464728 | Msa0067500:CDS |
| CGAATGAATGAATGAATGAA+TGG | 0.534101 | 1_2:-32462963 | None:intergenic |
| TGCTGAAGATATTTCAAGGT+CGG | 0.534645 | 1_2:-32464412 | None:intergenic |
| AGCTTCTGTTGGAAGAATGC+CGG | 0.536493 | 1_2:+32464739 | Msa0067500:CDS |
| AAATTCAAGGATTCTCCAGA+TGG | 0.538275 | 1_2:+32465758 | Msa0067500:CDS |
| TTTGAAATGGGACGGCCAGA+GGG | 0.541542 | 1_2:+32463622 | Msa0067500:CDS |
| CAACATCATTCCCATTTGCA+AGG | 0.541742 | 1_2:-32463579 | None:intergenic |
| CACAGAAGAGAGTGAGAGAG+AGG | 0.542034 | 1_2:-32463019 | None:intergenic |
| AGGGAGTCTCGCTTACACTT+TGG | 0.543148 | 1_2:+32464248 | Msa0067500:CDS |
| ATTTGAATAGGGTACAATTG+AGG | 0.543345 | 1_2:+32465889 | Msa0067500:three_prime_UTR |
| GAAGCTGGTGGTACTTCTCA+TGG | 0.548105 | 1_2:-32464722 | None:intergenic |
| ATAGAGTCCTCAGAACTGCC+GGG | 0.548616 | 1_2:+32464499 | Msa0067500:CDS |
| GTTACGGAGAATGGTGATGG+TGG | 0.548736 | 1_2:+32463544 | Msa0067500:CDS |
| TATTGCAACAGTTCGTCAAA+GGG | 0.552393 | 1_2:+32464170 | Msa0067500:CDS |
| CTCACAATGCGACACACATC+AGG | 0.554021 | 1_2:-32464915 | None:intergenic |
| GCAGTTCTCCTTTATGGAGT+CGG | 0.554604 | 1_2:+32464596 | Msa0067500:CDS |
| GATGCTAGAACAGCAAAGAA+AGG | 0.554714 | 1_2:+32464200 | Msa0067500:CDS |
| TTTGCACTTAAATCTGGCTG+AGG | 0.555275 | 1_2:-32465203 | None:intergenic |
| TTACGGAGAATGGTGATGGT+GGG | 0.555386 | 1_2:+32463545 | Msa0067500:CDS |
| GGAGAATGGTGATGGTGGGG+AGG | 0.558620 | 1_2:+32463549 | Msa0067500:CDS |
| ACCACTCCCAACTCTGTGCA+TGG | 0.558654 | 1_2:-32465426 | None:intergenic |
| CCTGAGGAGACAAATCAGAA+TGG | 0.559457 | 1_2:+32465326 | Msa0067500:CDS |
| GGCATGCCTTTGAAATGGGA+CGG | 0.560747 | 1_2:+32463614 | Msa0067500:CDS |
| TCAGGTACCATGGAGGAGAA+TGG | 0.560880 | 1_2:-32464897 | None:intergenic |
| AAGTGCTAGAAAGAAATCAA+TGG | 0.564131 | 1_2:+32465817 | Msa0067500:CDS |
| GTATTGCAACAGTTCGTCAA+AGG | 0.565832 | 1_2:+32464169 | Msa0067500:CDS |
| ACACACATTCGCAAATGCGC+CGG | 0.569485 | 1_2:-32462861 | None:intergenic |
| TTTGCGGTCAAGTTAACGAA+TGG | 0.570135 | 1_2:+32464094 | Msa0067500:CDS |
| TACGGAGAATGGTGATGGTG+GGG | 0.570467 | 1_2:+32463546 | Msa0067500:CDS |
| ATATGACAAGCACGATAAAG+AGG | 0.572535 | 1_2:-32464318 | None:intergenic |
| CTGATCAAGTTGAAACAATG+TGG | 0.572599 | 1_2:+32464535 | Msa0067500:CDS |
| AGACAATATGGGCATGACAT+TGG | 0.572728 | 1_2:+32464672 | Msa0067500:CDS |
| ATAGACAAGTTTATGACTGC+CGG | 0.574025 | 1_2:+32465290 | Msa0067500:CDS |
| ATAGTTGGGCTGCTTGTCGA+AGG | 0.575484 | 1_2:-32465151 | None:intergenic |
| AGAATTGCTTGGTAGAAGCA+AGG | 0.577014 | 1_2:+32465624 | Msa0067500:CDS |
| GGAGGACCCCGGCAGTTCTG+AGG | 0.577850 | 1_2:-32464506 | None:intergenic |
| CAACTCTGTGCATGGCATCG+AGG | 0.578394 | 1_2:-32465418 | None:intergenic |
| CTGGCTTTAAAATAGAATGA+AGG | 0.578592 | 1_2:-32465379 | None:intergenic |
| TCCCTTGCCGATCAATTGAA+AGG | 0.579012 | 1_2:+32465180 | Msa0067500:CDS |
| AGTATTCACGAAACTTCTCT+CGG | 0.584288 | 1_2:-32464359 | None:intergenic |
| ATTGTGAGATCCTTTATCAA+AGG | 0.584314 | 1_2:+32464930 | Msa0067500:CDS |
| CACACATCTTCTCCTGGTGA+AGG | 0.584480 | 1_2:+32464620 | Msa0067500:CDS |
| AACAATATATTTCAGGAGCA+GGG | 0.589178 | 1_2:+32464229 | Msa0067500:CDS |
| CTTGCAAATGGGAATGATGT+TGG | 0.589681 | 1_2:+32463580 | Msa0067500:CDS |
| TGAATAGGGTACAATTGAGG+TGG | 0.590973 | 1_2:+32465892 | Msa0067500:three_prime_UTR |
| TGTTGCACCATTCTCCTCCA+TGG | 0.591225 | 1_2:+32464890 | Msa0067500:CDS |
| CGACAAGCAGCCCAACTATG+TGG | 0.597104 | 1_2:+32465155 | Msa0067500:CDS |
| ATCAGCTACCAGGAGGACCC+CGG | 0.601153 | 1_2:-32464517 | None:intergenic |
| TGTAACAGTCAAGTTTCTGA+AGG | 0.602302 | 1_2:+32463940 | Msa0067500:CDS |
| AACATCATTCCCATTTGCAA+GGG | 0.603548 | 1_2:-32463578 | None:intergenic |
| AGAACAGCAAAGAAAGGCTG+AGG | 0.604899 | 1_2:+32464206 | Msa0067500:CDS |
| CGGTGTTAATTGGACTCCTG+AGG | 0.606073 | 1_2:+32465310 | Msa0067500:CDS |
| CCTTCAGAGGAATACTCTGA+AGG | 0.607812 | 1_2:-32464011 | None:intergenic |
| CACGAAGCTCATCGACAGCA+AGG | 0.608904 | 1_2:-32463729 | None:intergenic |
| TTTGATTGTATGCAATGATG+AGG | 0.610955 | 1_2:-32466030 | None:intergenic |
| GGAAAAGGAAGCTGAAATCG+AGG | 0.612019 | 1_2:+32463675 | Msa0067500:CDS |
| ACAGAAGAGAGTGAGAGAGA+GGG | 0.616416 | 1_2:-32463018 | None:intergenic |
| TGATCAAGTTGAAACAATGT+GGG | 0.617908 | 1_2:+32464536 | Msa0067500:CDS |
| AAGGTACCTGGTCGAAAATG+GGG | 0.618297 | 1_2:-32463068 | None:intergenic |
| TCCTCTGAAGGCTCTCAAAG+TGG | 0.620998 | 1_2:+32464023 | Msa0067500:CDS |
| AATTCAAGGATTCTCCAGAT+GGG | 0.625722 | 1_2:+32465759 | Msa0067500:CDS |
| TCAGCCAGATTTAAGTGCAA+AGG | 0.629183 | 1_2:+32465205 | Msa0067500:CDS |
| GGATTATGTCACTCTGTTTG+GGG | 0.632995 | 1_2:+32464641 | Msa0067500:CDS |
| TTGAAATGGGACGGCCAGAG+GGG | 0.633318 | 1_2:+32463623 | Msa0067500:CDS |
| TTACAGTGGCCTATTGAACA+TGG | 0.634704 | 1_2:+32465256 | Msa0067500:CDS |
| TTATTCCGCATTGAAAACTG+TGG | 0.636673 | 1_2:+32463969 | Msa0067500:CDS |
| GCGACACACATCAGGTACCA+TGG | 0.639961 | 1_2:-32464907 | None:intergenic |
| AGTGTTACGGAGAATGGTGA+TGG | 0.644041 | 1_2:+32463541 | Msa0067500:CDS |
| CTCAGGAGTCCAATTAACAC+CGG | 0.645970 | 1_2:-32465309 | None:intergenic |
| TCAAAGGCATGCCTAACAAG+AGG | 0.647185 | 1_2:-32463604 | None:intergenic |
| GCCACTTTGAGAGCCTTCAG+AGG | 0.648980 | 1_2:-32464024 | None:intergenic |
| TTACTCAATACAATTAATGG+TGG | 0.652301 | 1_2:+32465056 | Msa0067500:CDS |
| GGTGATCTTGAAAACGTCGA+GGG | 0.652921 | 1_2:+32465226 | Msa0067500:CDS |
| GAGTGACATAATCCTTCACC+AGG | 0.654242 | 1_2:-32464632 | None:intergenic |
| TCGAGGGACGCAGCTTACAG+TGG | 0.655470 | 1_2:+32465242 | Msa0067500:CDS |
| TAGAGTCCTCAGAACTGCCG+GGG | 0.665006 | 1_2:+32464500 | Msa0067500:CDS |
| GCCATGCACAGAGTTGGGAG+TGG | 0.668719 | 1_2:+32465425 | Msa0067500:CDS |
| CTTCACCAGGAGAAGATGTG+TGG | 0.674846 | 1_2:-32464619 | None:intergenic |
| TGAATGTCTTTGATGTTGTG+AGG | 0.677996 | 1_2:+32464991 | Msa0067500:CDS |
| AGGTGATCTTGAAAACGTCG+AGG | 0.679596 | 1_2:+32465225 | Msa0067500:CDS |
| ACTCTGTGCATGGCATCGAG+GGG | 0.682682 | 1_2:-32465416 | None:intergenic |
| TTATTCTGTTAAGAAGAATG+TGG | 0.707411 | 1_2:+32463861 | Msa0067500:CDS |
| ATTCTTCCAACAGAAGCTGG+TGG | 0.710384 | 1_2:-32464734 | None:intergenic |
| AACAATGTGGGAGACAGCTG+TGG | 0.714292 | 1_2:+32464548 | Msa0067500:CDS |
| CAACTTGATCAGCTACCAGG+AGG | 0.723111 | 1_2:-32464524 | None:intergenic |
| GATGTGCAAGACTCATTACG+AGG | 0.737166 | 1_2:+32463699 | Msa0067500:CDS |
| AATGTCCAAGAAGTGTGTTG+AGG | 0.745587 | 1_2:+32463897 | Msa0067500:CDS |
| ACACACATCAGGTACCATGG+AGG | 0.775847 | 1_2:-32464904 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTATTTTTGTTGAATT+TGG | + | chr1_2:32463473-32463492 | Msa0067500:intron | 15.0% |
| !! | AAATATTCTTTCATTTGAAT+AGG | + | chr1_2:32465877-32465896 | Msa0067500:three_prime_UTR | 15.0% |
| !! | AATATTCTTTCATTTGAATA+GGG | + | chr1_2:32465878-32465897 | Msa0067500:three_prime_UTR | 15.0% |
| !! | AGACTTAAATGAAATTACTA+AGG | - | chr1_2:32463236-32463255 | None:intergenic | 20.0% |
| !! | ACATTATAATTACACAACAA+TGG | + | chr1_2:32463278-32463297 | Msa0067500:intron | 20.0% |
| !!! | TTCTATTTTCTATTTTCTGA+TGG | + | chr1_2:32463393-32463412 | Msa0067500:intron | 20.0% |
| !! | GTATTACTCAATACAATTAA+TGG | + | chr1_2:32465053-32465072 | Msa0067500:CDS | 20.0% |
| !!! | ATTAGTGTTTCTATATTGTT+CGG | + | chr1_2:32465952-32465971 | Msa0067500:three_prime_UTR | 20.0% |
| !! | GAGAAATTCATTCAAATTTA+AGG | - | chr1_2:32465993-32466012 | None:intergenic | 20.0% |
| !! | AAATTTGAATGAATTTCTCA+TGG | + | chr1_2:32465994-32466013 | Msa0067500:three_prime_UTR | 20.0% |
| ! | CATTCATTCATTCATTCATT+CGG | + | chr1_2:32462964-32462983 | Msa0067500:CDS | 25.0% |
| ! | ATAGAGAAGTTAATCGTAAA+TGG | - | chr1_2:32463166-32463185 | None:intergenic | 25.0% |
| ! | TATAATTACACAACAATGGA+AGG | + | chr1_2:32463282-32463301 | Msa0067500:intron | 25.0% |
| ! | AAGGTAAACAAGCAATTAAT+GGG | + | chr1_2:32463301-32463320 | Msa0067500:intron | 25.0% |
| !! | TTTTCTATTTTCTGATGGAA+AGG | + | chr1_2:32463398-32463417 | Msa0067500:intron | 25.0% |
| ! | AAATCACTATAGTTGTATGT+TGG | + | chr1_2:32463431-32463450 | Msa0067500:intron | 25.0% |
| !!! | TTTTGTTGAATTTGGTTTCT+AGG | + | chr1_2:32463481-32463500 | Msa0067500:intron | 25.0% |
| !! | TTTGTTGAATTTGGTTTCTA+GGG | + | chr1_2:32463482-32463501 | Msa0067500:intron | 25.0% |
| ! | TTATTCTGTTAAGAAGAATG+TGG | + | chr1_2:32463861-32463880 | Msa0067500:CDS | 25.0% |
| !! | TCAATGTGCAATTTTATTAC+AGG | - | chr1_2:32464066-32464085 | None:intergenic | 25.0% |
| !! | TGTCATATTCATGATTTTCT+AGG | + | chr1_2:32464333-32464352 | Msa0067500:CDS | 25.0% |
| ! | TTACTCAATACAATTAATGG+TGG | + | chr1_2:32465056-32465075 | Msa0067500:CDS | 25.0% |
| TAGTTAAACAAAAAACACGC+CGG | + | chr1_2:32462842-32462861 | Msa0067500:five_prime_UTR | 30.0% | |
| CGAATGAATGAATGAATGAA+TGG | - | chr1_2:32462966-32462985 | None:intergenic | 30.0% | |
| GAAGGTAAACAAGCAATTAA+TGG | + | chr1_2:32463300-32463319 | Msa0067500:intron | 30.0% | |
| ! | TGTTGGTTAATCTCTTGAAA+TGG | + | chr1_2:32463448-32463467 | Msa0067500:intron | 30.0% |
| !!! | AATTTTAAGTTACAGCAGGT+TGG | + | chr1_2:32463799-32463818 | Msa0067500:CDS | 30.0% |
| ! | TTTTCAATGCGGAATAAAAC+TGG | - | chr1_2:32463966-32463985 | None:intergenic | 30.0% |
| AACAATATATTTCAGGAGCA+GGG | + | chr1_2:32464229-32464248 | Msa0067500:CDS | 30.0% | |
| AGAATCTTCGTCAAATTCTT+CGG | - | chr1_2:32464277-32464296 | None:intergenic | 30.0% | |
| CAATTTGAGCAAAAAATGTC+TGG | - | chr1_2:32464458-32464477 | None:intergenic | 30.0% | |
| !!! | ACATTTTTTGCTCAAATTGC+TGG | + | chr1_2:32464459-32464478 | Msa0067500:CDS | 30.0% |
| !! | TGATCAAGTTGAAACAATGT+GGG | + | chr1_2:32464536-32464555 | Msa0067500:CDS | 30.0% |
| TAAAATGACATCTGTGTTAG+AGG | + | chr1_2:32464572-32464591 | Msa0067500:CDS | 30.0% | |
| !!! | ATTCCTTTTTTATCGACACT+TGG | - | chr1_2:32464803-32464822 | None:intergenic | 30.0% |
| ATTGTGAGATCCTTTATCAA+AGG | + | chr1_2:32464930-32464949 | Msa0067500:CDS | 30.0% | |
| ! | TCTGTTGATTACTTATCTCA+TGG | + | chr1_2:32464954-32464973 | Msa0067500:CDS | 30.0% |
| GATTACTTATCTCATGGTAT+TGG | + | chr1_2:32464960-32464979 | Msa0067500:CDS | 30.0% | |
| ! | CTTTGTTTACCATGTTCAAT+AGG | - | chr1_2:32465268-32465287 | None:intergenic | 30.0% |
| !! | CTGGCTTTAAAATAGAATGA+AGG | - | chr1_2:32465382-32465401 | None:intergenic | 30.0% |
| !!! | AGGTAGTTTTAAGAATTGCT+TGG | + | chr1_2:32465613-32465632 | Msa0067500:CDS | 30.0% |
| ATCCTTGAATTTATCACAGA+TGG | - | chr1_2:32465750-32465769 | None:intergenic | 30.0% | |
| ! | GCTTAGCATTTTTATTAGCA+AGG | - | chr1_2:32465796-32465815 | None:intergenic | 30.0% |
| AAGTGCTAGAAAGAAATCAA+TGG | + | chr1_2:32465817-32465836 | Msa0067500:CDS | 30.0% | |
| ATTTGAATAGGGTACAATTG+AGG | + | chr1_2:32465889-32465908 | Msa0067500:three_prime_UTR | 30.0% | |
| ! | TTGTTCGGACTTGTTTAATT+AGG | + | chr1_2:32465967-32465986 | Msa0067500:three_prime_UTR | 30.0% |
| TTTGATTGTATGCAATGATG+AGG | - | chr1_2:32466033-32466052 | None:intergenic | 30.0% | |
| TTCATTCATTCATTCGGCAA+CGG | + | chr1_2:32462970-32462989 | Msa0067500:CDS | 35.0% | |
| GTGTATAATTCGAGCAGAAT+AGG | - | chr1_2:32463190-32463209 | None:intergenic | 35.0% | |
| !! | ACCAAAGAGAAGAAGTGTTA+CGG | + | chr1_2:32463528-32463547 | Msa0067500:CDS | 35.0% |
| AACATCATTCCCATTTGCAA+GGG | - | chr1_2:32463581-32463600 | None:intergenic | 35.0% | |
| !! | GAGTTTTGTGGTTAAGGAAA+AGG | + | chr1_2:32463660-32463679 | Msa0067500:CDS | 35.0% |
| GAGTTAAAGAGTCAACTTCA+TGG | + | chr1_2:32463772-32463791 | Msa0067500:CDS | 35.0% | |
| !!! | CGACAATTTTAAGTTACAGC+AGG | + | chr1_2:32463795-32463814 | Msa0067500:CDS | 35.0% |
| TGTAACAGTCAAGTTTCTGA+AGG | + | chr1_2:32463940-32463959 | Msa0067500:CDS | 35.0% | |
| TTATTCCGCATTGAAAACTG+TGG | + | chr1_2:32463969-32463988 | Msa0067500:CDS | 35.0% | |
| ! | CAAATCCACAGTTTTCAATG+CGG | - | chr1_2:32463977-32463996 | None:intergenic | 35.0% |
| TACAGGAATTCTTCTCTCTA+CGG | - | chr1_2:32464049-32464068 | None:intergenic | 35.0% | |
| CACATTGAGAAGAATGTTTG+CGG | + | chr1_2:32464078-32464097 | Msa0067500:CDS | 35.0% | |
| ACGAATGGATGGTTCAAATA+AGG | + | chr1_2:32464109-32464128 | Msa0067500:CDS | 35.0% | |
| AGGAGTTCTGCTAGAAATAT+CGG | + | chr1_2:32464129-32464148 | Msa0067500:CDS | 35.0% | |
| TTTGACGAACTGTTGCAATA+CGG | - | chr1_2:32464170-32464189 | None:intergenic | 35.0% | |
| TATTGCAACAGTTCGTCAAA+GGG | + | chr1_2:32464170-32464189 | Msa0067500:CDS | 35.0% | |
| GCTGAGGAACAATATATTTC+AGG | + | chr1_2:32464222-32464241 | Msa0067500:CDS | 35.0% | |
| GAACAATATATTTCAGGAGC+AGG | + | chr1_2:32464228-32464247 | Msa0067500:CDS | 35.0% | |
| ATATGACAAGCACGATAAAG+AGG | - | chr1_2:32464321-32464340 | None:intergenic | 35.0% | |
| AGTATTCACGAAACTTCTCT+CGG | - | chr1_2:32464362-32464381 | None:intergenic | 35.0% | |
| TGCTGAAGATATTTCAAGGT+CGG | - | chr1_2:32464415-32464434 | None:intergenic | 35.0% | |
| GTTGTGCTGAAGATATTTCA+AGG | - | chr1_2:32464419-32464438 | None:intergenic | 35.0% | |
| GTCTGGTAAGATTCAACAAA+AGG | - | chr1_2:32464441-32464460 | None:intergenic | 35.0% | |
| !! | CTGATCAAGTTGAAACAATG+TGG | + | chr1_2:32464535-32464554 | Msa0067500:CDS | 35.0% |
| AAGGATTATGTCACTCTGTT+TGG | + | chr1_2:32464639-32464658 | Msa0067500:CDS | 35.0% | |
| AGGATTATGTCACTCTGTTT+GGG | + | chr1_2:32464640-32464659 | Msa0067500:CDS | 35.0% | |
| CAACAAACTGTTGATGTTCT+CGG | + | chr1_2:32464762-32464781 | Msa0067500:CDS | 35.0% | |
| !! | TGACCAAGTGTCGATAAAAA+AGG | + | chr1_2:32464797-32464816 | Msa0067500:CDS | 35.0% |
| ATCAACAGAGCCTTTGATAA+AGG | - | chr1_2:32464943-32464962 | None:intergenic | 35.0% | |
| TGAATGTCTTTGATGTTGTG+AGG | + | chr1_2:32464991-32465010 | Msa0067500:CDS | 35.0% | |
| !! | TGATGTTGTGAGGAAGTATT+TGG | + | chr1_2:32465001-32465020 | Msa0067500:CDS | 35.0% |
| CTGCATTCAATACGTCAATA+AGG | - | chr1_2:32465034-32465053 | None:intergenic | 35.0% | |
| AAAAATCACAGGCTCTTTCA+AGG | - | chr1_2:32465130-32465149 | None:intergenic | 35.0% | |
| TTGTCGAAGGAAAAAATCAC+AGG | - | chr1_2:32465141-32465160 | None:intergenic | 35.0% | |
| ATCACCTTTGCACTTAAATC+TGG | - | chr1_2:32465212-32465231 | None:intergenic | 35.0% | |
| ATAGACAAGTTTATGACTGC+CGG | + | chr1_2:32465290-32465309 | Msa0067500:CDS | 35.0% | |
| ! | TCTCTAGTGATAGTGTCAAA+AGG | + | chr1_2:32465486-32465505 | Msa0067500:CDS | 35.0% |
| CTGGGAGAAATTTACAATGA+AGG | + | chr1_2:32465593-32465612 | Msa0067500:CDS | 35.0% | |
| ACTTCATGAATCCTGGTATA+AGG | + | chr1_2:32465684-32465703 | Msa0067500:CDS | 35.0% | |
| CTTCATGAATCCTGGTATAA+GGG | + | chr1_2:32465685-32465704 | Msa0067500:CDS | 35.0% | |
| ! | TAACTTTTCTCCCTTATACC+AGG | - | chr1_2:32465698-32465717 | None:intergenic | 35.0% |
| GGAGAAAAGTTACTATGCAT+TGG | + | chr1_2:32465706-32465725 | Msa0067500:CDS | 35.0% | |
| CTATGCATTGGATTACAAGA+AGG | + | chr1_2:32465718-32465737 | Msa0067500:CDS | 35.0% | |
| TGCCATCTGTGATAAATTCA+AGG | + | chr1_2:32465745-32465764 | Msa0067500:CDS | 35.0% | |
| AAATTCAAGGATTCTCCAGA+TGG | + | chr1_2:32465758-32465777 | Msa0067500:CDS | 35.0% | |
| AATTCAAGGATTCTCCAGAT+GGG | + | chr1_2:32465759-32465778 | Msa0067500:CDS | 35.0% | |
| ! | GTGGTTTTCTTCTTCTATTG+TGG | + | chr1_2:32465911-32465930 | Msa0067500:three_prime_UTR | 35.0% |
| ! | GTCGAAAATGGGGTTTGTTT+GGG | - | chr1_2:32463061-32463080 | None:intergenic | 40.0% |
| !! | AAAGGTACCTGGTCGAAAAT+GGG | - | chr1_2:32463072-32463091 | None:intergenic | 40.0% |
| AGTGAGAGTGAAGAGAAGAA+AGG | - | chr1_2:32463090-32463109 | None:intergenic | 40.0% | |
| TCTAGGGATTCATGTGATCA+TGG | + | chr1_2:32463498-32463517 | Msa0067500:intron | 40.0% | |
| TCCGTAACACTTCTTCTCTT+TGG | - | chr1_2:32463532-32463551 | None:intergenic | 40.0% | |
| !! | AGAAGAAGTGTTACGGAGAA+TGG | + | chr1_2:32463535-32463554 | Msa0067500:CDS | 40.0% |
| AGGATTTGTCCCTTGCAAAT+GGG | + | chr1_2:32463569-32463588 | Msa0067500:CDS | 40.0% | |
| CAACATCATTCCCATTTGCA+AGG | - | chr1_2:32463582-32463601 | None:intergenic | 40.0% | |
| CTTGCAAATGGGAATGATGT+TGG | + | chr1_2:32463580-32463599 | Msa0067500:CDS | 40.0% | |
| ATGATGTTGGTCCTCTTGTT+AGG | + | chr1_2:32463593-32463612 | Msa0067500:CDS | 40.0% | |
| ! | TGTTAGGCATGCCTTTGAAA+TGG | + | chr1_2:32463609-32463628 | Msa0067500:CDS | 40.0% |
| !! | GTTAGGCATGCCTTTGAAAT+GGG | + | chr1_2:32463610-32463629 | Msa0067500:CDS | 40.0% |
| CCTTAACCACAAAACTCATC+TGG | - | chr1_2:32463657-32463676 | None:intergenic | 40.0% | |
| !! | CCAGATGAGTTTTGTGGTTA+AGG | + | chr1_2:32463654-32463673 | Msa0067500:CDS | 40.0% |
| ! | AATGTCCAAGAAGTGTGTTG+AGG | + | chr1_2:32463897-32463916 | Msa0067500:CDS | 40.0% |
| TAACACCTCAACACACTTCT+TGG | - | chr1_2:32463905-32463924 | None:intergenic | 40.0% | |
| TTTGCGGTCAAGTTAACGAA+TGG | + | chr1_2:32464094-32464113 | Msa0067500:CDS | 40.0% | |
| GGAGTTCTGCTAGAAATATC+GGG | + | chr1_2:32464130-32464149 | Msa0067500:CDS | 40.0% | |
| AATATCGGGCAAACAGCAAT+TGG | + | chr1_2:32464144-32464163 | Msa0067500:CDS | 40.0% | |
| GTATTGCAACAGTTCGTCAA+AGG | + | chr1_2:32464169-32464188 | Msa0067500:CDS | 40.0% | |
| GATGCTAGAACAGCAAAGAA+AGG | + | chr1_2:32464200-32464219 | Msa0067500:CDS | 40.0% | |
| !! | TCAAATTGCTGGCTTCTTCA+TGG | + | chr1_2:32464470-32464489 | Msa0067500:CDS | 40.0% |
| TTTCAACTTGATCAGCTACC+AGG | - | chr1_2:32464530-32464549 | None:intergenic | 40.0% | |
| GGATTATGTCACTCTGTTTG+GGG | + | chr1_2:32464641-32464660 | Msa0067500:CDS | 40.0% | |
| GGGCTACTCTTAGACAATAT+GGG | + | chr1_2:32464661-32464680 | Msa0067500:CDS | 40.0% | |
| AGACAATATGGGCATGACAT+TGG | + | chr1_2:32464672-32464691 | Msa0067500:CDS | 40.0% | |
| !! | GAACATCAACAGTTTGTTGC+CGG | - | chr1_2:32464761-32464780 | None:intergenic | 40.0% |
| TTTGCACTTAAATCTGGCTG+AGG | - | chr1_2:32465206-32465225 | None:intergenic | 40.0% | |
| TCAGCCAGATTTAAGTGCAA+AGG | + | chr1_2:32465205-32465224 | Msa0067500:CDS | 40.0% | |
| TTACAGTGGCCTATTGAACA+TGG | + | chr1_2:32465256-32465275 | Msa0067500:CDS | 40.0% | |
| ! | TTATGACTGCCGGTGTTAAT+TGG | + | chr1_2:32465300-32465319 | Msa0067500:CDS | 40.0% |
| !! | AGGGGTAAAATTTGTTGTGC+TGG | - | chr1_2:32465401-32465420 | None:intergenic | 40.0% |
| GCATATTTCCAGTTCTCTAG+TGG | + | chr1_2:32465457-32465476 | Msa0067500:CDS | 40.0% | |
| GATGAACAGTTCTATTCTGC+TGG | + | chr1_2:32465569-32465588 | Msa0067500:CDS | 40.0% | |
| AGAATTGCTTGGTAGAAGCA+AGG | + | chr1_2:32465624-32465643 | Msa0067500:CDS | 40.0% | |
| GATTCTCCAGATGGGATATT+TGG | + | chr1_2:32465767-32465786 | Msa0067500:CDS | 40.0% | |
| TGAATAGGGTACAATTGAGG+TGG | + | chr1_2:32465892-32465911 | Msa0067500:three_prime_UTR | 40.0% | |
| CACAGACAGCAGTACTGTTT+GGG | - | chr1_2:32462907-32462926 | None:intergenic | 45.0% | |
| TCACAGACAGCAGTACTGTT+TGG | - | chr1_2:32462908-32462927 | None:intergenic | 45.0% | |
| ACAGAAGAGAGTGAGAGAGA+GGG | - | chr1_2:32463021-32463040 | None:intergenic | 45.0% | |
| ! | GAAAATGGGGTTTGTTTGGG+TGG | - | chr1_2:32463058-32463077 | None:intergenic | 45.0% |
| ! | GGTCGAAAATGGGGTTTGTT+TGG | - | chr1_2:32463062-32463081 | None:intergenic | 45.0% |
| ! | AACAAACCCCATTTTCGACC+AGG | + | chr1_2:32463062-32463081 | Msa0067500:CDS | 45.0% |
| ! | AAGGTACCTGGTCGAAAATG+GGG | - | chr1_2:32463071-32463090 | None:intergenic | 45.0% |
| !! | GAAAGGTACCTGGTCGAAAA+TGG | - | chr1_2:32463073-32463092 | None:intergenic | 45.0% |
| !! | GTGAAGAGAAGAAAGGTACC+TGG | - | chr1_2:32463083-32463102 | None:intergenic | 45.0% |
| AGTGTTACGGAGAATGGTGA+TGG | + | chr1_2:32463541-32463560 | Msa0067500:CDS | 45.0% | |
| !! | TTACGGAGAATGGTGATGGT+GGG | + | chr1_2:32463545-32463564 | Msa0067500:CDS | 45.0% |
| GAGGATTTGTCCCTTGCAAA+TGG | + | chr1_2:32463568-32463587 | Msa0067500:CDS | 45.0% | |
| ! | TCAAAGGCATGCCTAACAAG+AGG | - | chr1_2:32463607-32463626 | None:intergenic | 45.0% |
| ! | TCTTCGCCAGATGAGTTTTG+TGG | + | chr1_2:32463648-32463667 | Msa0067500:CDS | 45.0% |
| GGAAAAGGAAGCTGAAATCG+AGG | + | chr1_2:32463675-32463694 | Msa0067500:CDS | 45.0% | |
| GATGTGCAAGACTCATTACG+AGG | + | chr1_2:32463699-32463718 | Msa0067500:CDS | 45.0% | |
| GCTCTTCAAGCTTGACAAGA+AGG | - | chr1_2:32463831-32463850 | None:intergenic | 45.0% | |
| ! | GTTGAGGTGTTAGAGCTTTG+CGG | + | chr1_2:32463913-32463932 | Msa0067500:CDS | 45.0% |
| CCTTCAGAGGAATACTCTGA+AGG | - | chr1_2:32464014-32464033 | None:intergenic | 45.0% | |
| ! | CCTTCAGAGTATTCCTCTGA+AGG | + | chr1_2:32464011-32464030 | Msa0067500:CDS | 45.0% |
| CGGTCAAGTTAACGAATGGA+TGG | + | chr1_2:32464098-32464117 | Msa0067500:CDS | 45.0% | |
| AGAACAGCAAAGAAAGGCTG+AGG | + | chr1_2:32464206-32464225 | Msa0067500:CDS | 45.0% | |
| AGAGGAGCAGTTCTCCTTTA+TGG | + | chr1_2:32464590-32464609 | Msa0067500:CDS | 45.0% | |
| GCAGTTCTCCTTTATGGAGT+CGG | + | chr1_2:32464596-32464615 | Msa0067500:CDS | 45.0% | |
| GAGTGACATAATCCTTCACC+AGG | - | chr1_2:32464635-32464654 | None:intergenic | 45.0% | |
| GGGGCTACTCTTAGACAATA+TGG | + | chr1_2:32464660-32464679 | Msa0067500:CDS | 45.0% | |
| ATTCTTCCAACAGAAGCTGG+TGG | - | chr1_2:32464737-32464756 | None:intergenic | 45.0% | |
| AGCTTCTGTTGGAAGAATGC+CGG | + | chr1_2:32464739-32464758 | Msa0067500:CDS | 45.0% | |
| GGTGCAACATATGGAAAAGC+AGG | - | chr1_2:32464879-32464898 | None:intergenic | 45.0% | |
| GAGGAGAATGGTGCAACATA+TGG | - | chr1_2:32464888-32464907 | None:intergenic | 45.0% | |
| TCCCTTGCCGATCAATTGAA+AGG | + | chr1_2:32465180-32465199 | Msa0067500:CDS | 45.0% | |
| GCCTTTCAATTGATCGGCAA+GGG | - | chr1_2:32465184-32465203 | None:intergenic | 45.0% | |
| GCTGAGGCCTTTCAATTGAT+CGG | - | chr1_2:32465190-32465209 | None:intergenic | 45.0% | |
| AGGTGATCTTGAAAACGTCG+AGG | + | chr1_2:32465225-32465244 | Msa0067500:CDS | 45.0% | |
| GGTGATCTTGAAAACGTCGA+GGG | + | chr1_2:32465226-32465245 | Msa0067500:CDS | 45.0% | |
| CTCAGGAGTCCAATTAACAC+CGG | - | chr1_2:32465312-32465331 | None:intergenic | 45.0% | |
| ! | CCATTCTGATTTGTCTCCTC+AGG | - | chr1_2:32465329-32465348 | None:intergenic | 45.0% |
| CCTGAGGAGACAAATCAGAA+TGG | + | chr1_2:32465326-32465345 | Msa0067500:CDS | 45.0% | |
| ACAGTTCTATTCTGCTGGTC+TGG | + | chr1_2:32465574-32465593 | Msa0067500:CDS | 45.0% | |
| ! | CAGTTCTATTCTGCTGGTCT+GGG | + | chr1_2:32465575-32465594 | Msa0067500:CDS | 45.0% |
| GCTGAGAACTTCATGAATCC+TGG | + | chr1_2:32465677-32465696 | Msa0067500:CDS | 45.0% | |
| AGGCTTCCAAATATCCCATC+TGG | - | chr1_2:32465776-32465795 | None:intergenic | 45.0% | |
| CAATGGACGTGCTCAAAAAG+CGG | + | chr1_2:32465834-32465853 | Msa0067500:CDS | 45.0% | |
| ACACACATTCGCAAATGCGC+CGG | - | chr1_2:32462864-32462883 | None:intergenic | 50.0% | |
| GCGCATTTGCGAATGTGTGT+CGG | + | chr1_2:32462864-32462883 | Msa0067500:exon | 50.0% | |
| CGCATTTGCGAATGTGTGTC+GGG | + | chr1_2:32462865-32462884 | Msa0067500:exon | 50.0% | |
| TTTGCGAATGTGTGTCGGGT+TGG | + | chr1_2:32462869-32462888 | Msa0067500:exon | 50.0% | |
| TTGCGAATGTGTGTCGGGTT+GGG | + | chr1_2:32462870-32462889 | Msa0067500:exon | 50.0% | |
| CACAGAAGAGAGTGAGAGAG+AGG | - | chr1_2:32463022-32463041 | None:intergenic | 50.0% | |
| !! | GTTACGGAGAATGGTGATGG+TGG | + | chr1_2:32463544-32463563 | Msa0067500:CDS | 50.0% |
| !! | TACGGAGAATGGTGATGGTG+GGG | + | chr1_2:32463546-32463565 | Msa0067500:CDS | 50.0% |
| !! | GGCATGCCTTTGAAATGGGA+CGG | + | chr1_2:32463614-32463633 | Msa0067500:CDS | 50.0% |
| ! | TTTGAAATGGGACGGCCAGA+GGG | + | chr1_2:32463622-32463641 | Msa0067500:CDS | 50.0% |
| ! | TCCTCTGAAGGCTCTCAAAG+TGG | + | chr1_2:32464023-32464042 | Msa0067500:CDS | 50.0% |
| AGGGAGTCTCGCTTACACTT+TGG | + | chr1_2:32464248-32464267 | Msa0067500:CDS | 50.0% | |
| !! | TGCTGGCTTCTTCATGGTTG+AGG | + | chr1_2:32464476-32464495 | Msa0067500:CDS | 50.0% |
| GATAGAGTCCTCAGAACTGC+CGG | + | chr1_2:32464498-32464517 | Msa0067500:CDS | 50.0% | |
| ATAGAGTCCTCAGAACTGCC+GGG | + | chr1_2:32464499-32464518 | Msa0067500:CDS | 50.0% | |
| CAACTTGATCAGCTACCAGG+AGG | - | chr1_2:32464527-32464546 | None:intergenic | 50.0% | |
| AACAATGTGGGAGACAGCTG+TGG | + | chr1_2:32464548-32464567 | Msa0067500:CDS | 50.0% | |
| ! | ATGTGTGGCCGACTCCATAA+AGG | - | chr1_2:32464607-32464626 | None:intergenic | 50.0% |
| CTTCACCAGGAGAAGATGTG+TGG | - | chr1_2:32464622-32464641 | None:intergenic | 50.0% | |
| CACACATCTTCTCCTGGTGA+AGG | + | chr1_2:32464620-32464639 | Msa0067500:CDS | 50.0% | |
| GAAGCTGGTGGTACTTCTCA+TGG | - | chr1_2:32464725-32464744 | None:intergenic | 50.0% | |
| ! | GAAGTACCACCAGCTTCTGT+TGG | + | chr1_2:32464728-32464747 | Msa0067500:CDS | 50.0% |
| GGCATTCTTCCAACAGAAGC+TGG | - | chr1_2:32464740-32464759 | None:intergenic | 50.0% | |
| TGTTGCACCATTCTCCTCCA+TGG | + | chr1_2:32464890-32464909 | Msa0067500:CDS | 50.0% | |
| TCAGGTACCATGGAGGAGAA+TGG | - | chr1_2:32464900-32464919 | None:intergenic | 50.0% | |
| ACACACATCAGGTACCATGG+AGG | - | chr1_2:32464907-32464926 | None:intergenic | 50.0% | |
| CTCACAATGCGACACACATC+AGG | - | chr1_2:32464918-32464937 | None:intergenic | 50.0% | |
| ATAGTTGGGCTGCTTGTCGA+AGG | - | chr1_2:32465154-32465173 | None:intergenic | 50.0% | |
| GCAAGGGATGCCACATAGTT+GGG | - | chr1_2:32465168-32465187 | None:intergenic | 50.0% | |
| GGCCTTTCAATTGATCGGCA+AGG | - | chr1_2:32465185-32465204 | None:intergenic | 50.0% | |
| ! | CGGTGTTAATTGGACTCCTG+AGG | + | chr1_2:32465310-32465329 | Msa0067500:CDS | 50.0% |
| ! | AACTCTGTGCATGGCATCGA+GGG | - | chr1_2:32465420-32465439 | None:intergenic | 50.0% |
| TCGATGCCATGCACAGAGTT+GGG | + | chr1_2:32465420-32465439 | Msa0067500:CDS | 50.0% | |
| GAAAGCAGCCACTAGAGAAC+TGG | - | chr1_2:32465468-32465487 | None:intergenic | 50.0% | |
| CGTGCTCAAAAAGCGGCTTA+AGG | + | chr1_2:32465841-32465860 | Msa0067500:CDS | 50.0% | |
| ! | TGCTGTCTGTGAGTGCTGCT+AGG | + | chr1_2:32462916-32462935 | Msa0067500:CDS | 55.0% |
| ! | GCTGTCTGTGAGTGCTGCTA+GGG | + | chr1_2:32462917-32462936 | Msa0067500:CDS | 55.0% |
| CTCTGGCCGTCCCATTTCAA+AGG | - | chr1_2:32463623-32463642 | None:intergenic | 55.0% | |
| !! | CTTTGAAATGGGACGGCCAG+AGG | + | chr1_2:32463621-32463640 | Msa0067500:CDS | 55.0% |
| TTGAAATGGGACGGCCAGAG+GGG | + | chr1_2:32463623-32463642 | Msa0067500:CDS | 55.0% | |
| CACGAAGCTCATCGACAGCA+AGG | - | chr1_2:32463732-32463751 | None:intergenic | 55.0% | |
| ! | CTTGCTGTCGATGAGCTTCG+TGG | + | chr1_2:32463730-32463749 | Msa0067500:CDS | 55.0% |
| ! | GCCACTTTGAGAGCCTTCAG+AGG | - | chr1_2:32464027-32464046 | None:intergenic | 55.0% |
| TAGAGTCCTCAGAACTGCCG+GGG | + | chr1_2:32464500-32464519 | Msa0067500:CDS | 55.0% | |
| GCGACACACATCAGGTACCA+TGG | - | chr1_2:32464910-32464929 | None:intergenic | 55.0% | |
| CGACAAGCAGCCCAACTATG+TGG | + | chr1_2:32465155-32465174 | Msa0067500:CDS | 55.0% | |
| GGCAAGGGATGCCACATAGT+TGG | - | chr1_2:32465169-32465188 | None:intergenic | 55.0% | |
| ! | ACTCTGTGCATGGCATCGAG+GGG | - | chr1_2:32465419-32465438 | None:intergenic | 55.0% |
| CAACTCTGTGCATGGCATCG+AGG | - | chr1_2:32465421-32465440 | None:intergenic | 55.0% | |
| CTCGATGCCATGCACAGAGT+TGG | + | chr1_2:32465419-32465438 | Msa0067500:CDS | 55.0% | |
| ACCACTCCCAACTCTGTGCA+TGG | - | chr1_2:32465429-32465448 | None:intergenic | 55.0% | |
| !! | GGAGAATGGTGATGGTGGGG+AGG | + | chr1_2:32463549-32463568 | Msa0067500:CDS | 60.0% |
| ATCTGGCGAAGAAGCCCCTC+TGG | - | chr1_2:32463640-32463659 | None:intergenic | 60.0% | |
| ATCAGCTACCAGGAGGACCC+CGG | - | chr1_2:32464520-32464539 | None:intergenic | 60.0% | |
| GTCGGCCACACATCTTCTCC+TGG | + | chr1_2:32464614-32464633 | Msa0067500:CDS | 60.0% | |
| TCGAGGGACGCAGCTTACAG+TGG | + | chr1_2:32465242-32465261 | Msa0067500:CDS | 60.0% | |
| GCCATGCACAGAGTTGGGAG+TGG | + | chr1_2:32465425-32465444 | Msa0067500:CDS | 60.0% | |
| GGAGGACCCCGGCAGTTCTG+AGG | - | chr1_2:32464509-32464528 | None:intergenic | 70.0% | |
| CAGAACTGCCGGGGTCCTCC+TGG | + | chr1_2:32464509-32464528 | Msa0067500:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 32462779 | 32466065 | 32462779 | ID=Msa0067500;Name=Msa0067500 |
| chr1_2 | mRNA | 32462779 | 32466065 | 32462779 | ID=Msa0067500-mRNA-1;Parent=Msa0067500;Name=Msa0067500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=97|1|1|1|0|0.5|2|191|859 |
| chr1_2 | exon | 32462779 | 32463083 | 32462779 | ID=Msa0067500-mRNA-1:exon:10603;Parent=Msa0067500-mRNA-1 |
| chr1_2 | exon | 32463503 | 32466065 | 32463503 | ID=Msa0067500-mRNA-1:exon:10604;Parent=Msa0067500-mRNA-1 |
| chr1_2 | five_prime_UTR | 32462779 | 32462875 | 32462779 | ID=Msa0067500-mRNA-1:five_prime_utr;Parent=Msa0067500-mRNA-1 |
| chr1_2 | CDS | 32462876 | 32463083 | 32462876 | ID=Msa0067500-mRNA-1:cds;Parent=Msa0067500-mRNA-1 |
| chr1_2 | CDS | 32463503 | 32465874 | 32463503 | ID=Msa0067500-mRNA-1:cds;Parent=Msa0067500-mRNA-1 |
| chr1_2 | three_prime_UTR | 32465875 | 32466065 | 32465875 | ID=Msa0067500-mRNA-1:three_prime_utr;Parent=Msa0067500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
