Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067650 | G7I7V7 | 89.869 | 533 | 16 | 5 | 1 | 502 | 1 | 526 | 0.0 | 880 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0067650 | Msa0377600 | 0.803740 | 3.017635e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067650 | MtrunA17_Chr1g0171481 | 89.869 | 533 | 16 | 5 | 1 | 502 | 1 | 526 | 0.0 | 880 |
| Msa0067650 | MtrunA17_Chr5g0409981 | 23.276 | 348 | 229 | 12 | 179 | 493 | 140 | 482 | 6.16e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067650 | AT2G28600.1 | 43.315 | 531 | 237 | 10 | 1 | 499 | 1 | 499 | 9.38e-123 | 369 |
Find 119 sgRNAs with CRISPR-Local
Find 469 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTGAAAGAGAGTCTTTA+TGG | 0.137373 | 1_2:-32649298 | None:intergenic |
| TCTATCAAGAAGTTTATTTC+TGG | 0.155332 | 1_2:+32645718 | Msa0067650:CDS |
| GGATGATTTGGTGTGATAAT+TGG | 0.199871 | 1_2:+32649255 | Msa0067650:three_prime_UTR |
| TCCGGCCTTGCGGCGTTTCT+TGG | 0.217677 | 1_2:-32643199 | None:intergenic |
| CCTACACTCTTCTCTTTAAC+AGG | 0.283482 | 1_2:-32643516 | None:intergenic |
| CTTTGAATGGGAGGATGATT+TGG | 0.304542 | 1_2:+32649243 | Msa0067650:three_prime_UTR |
| CCCTTGAATCTGATGATCTA+AGG | 0.308192 | 1_2:-32644145 | None:intergenic |
| ACTGGTTACAATGATTGATT+TGG | 0.319133 | 1_2:+32648866 | Msa0067650:CDS |
| GGAGTAGAAATGAGAAATTC+AGG | 0.337274 | 1_2:-32644322 | None:intergenic |
| ACCTAGTCTTGTACCCTCTA+TGG | 0.337478 | 1_2:+32648935 | Msa0067650:CDS |
| TTGAAGTCCTGCGTCAATTT+CGG | 0.338903 | 1_2:+32647526 | Msa0067650:CDS |
| TTGATAGATATTCTACAAAT+AGG | 0.346931 | 1_2:-32645817 | None:intergenic |
| GATATCTCTACTGTGGATAT+AGG | 0.349747 | 1_2:+32648891 | Msa0067650:CDS |
| CCATGTTTGGAACTAGGGTT+TGG | 0.351202 | 1_2:+32649218 | Msa0067650:three_prime_UTR |
| GGATGTCAAGTGCCATAAAT+TGG | 0.359156 | 1_2:+32647593 | Msa0067650:CDS |
| GGTATCAAATAGGTTATTGA+TGG | 0.384283 | 1_2:+32645652 | Msa0067650:intron |
| TTCTACTCCTGAGAGGCTCT+TGG | 0.388098 | 1_2:+32644336 | Msa0067650:CDS |
| CAATTCCATGTTTGGAACTA+GGG | 0.388990 | 1_2:+32649213 | Msa0067650:three_prime_UTR |
| CCTTCCTCAAAATATATAGA+AGG | 0.400810 | 1_2:-32647572 | None:intergenic |
| GTTGTGATCAATTCCATGTT+TGG | 0.406297 | 1_2:+32649205 | Msa0067650:three_prime_UTR |
| ATATCTCTACTGTGGATATA+GGG | 0.409557 | 1_2:+32648892 | Msa0067650:CDS |
| GAGTGAAGGACAGTAGAATT+TGG | 0.411076 | 1_2:+32649374 | Msa0067650:three_prime_UTR |
| GCCAAGAAACGCCGCAAGGC+CGG | 0.413531 | 1_2:+32643198 | Msa0067650:CDS |
| GGCACCACAGTTGGTAGAAA+TGG | 0.415955 | 1_2:+32643537 | Msa0067650:CDS |
| GGCTCAAAGCTTGTCACATA+AGG | 0.416311 | 1_2:-32649443 | None:intergenic |
| TCCTTAGATCATCAGATTCA+AGG | 0.420368 | 1_2:+32644144 | Msa0067650:CDS |
| GGCCTTGCGGCGTTTCTTGG+CGG | 0.421077 | 1_2:-32643196 | None:intergenic |
| TCAATTCCATGTTTGGAACT+AGG | 0.422106 | 1_2:+32649212 | Msa0067650:three_prime_UTR |
| ACAAGCTCCAAGAGCCTCTC+AGG | 0.425925 | 1_2:-32644343 | None:intergenic |
| TTCCCTTGTCTATCATTGAA+TGG | 0.428345 | 1_2:-32643432 | None:intergenic |
| CTAGGGTTTGGATCTTTGAA+TGG | 0.429912 | 1_2:+32649230 | Msa0067650:three_prime_UTR |
| GGTTACAATGATTGATTTGG+AGG | 0.441655 | 1_2:+32648869 | Msa0067650:CDS |
| ATGCAGCAACTATTAATGAT+AGG | 0.449372 | 1_2:+32647661 | Msa0067650:CDS |
| ATCGATGCTATTTGTAAAGC+TGG | 0.455172 | 1_2:+32645676 | Msa0067650:CDS |
| CAATGATAGACAAGGGAAAC+CGG | 0.458277 | 1_2:+32643437 | Msa0067650:CDS |
| CTCTTTCTTTCTTAACCCAT+GGG | 0.459713 | 1_2:+32643743 | Msa0067650:CDS |
| AAACACCATTGACACTTTGA+CGG | 0.460429 | 1_2:-32648989 | None:intergenic |
| GTTAGAAGATGCCGAACCAC+TGG | 0.463658 | 1_2:-32645790 | None:intergenic |
| TCAAAGGCTTGCAAACTGTT+CGG | 0.464224 | 1_2:-32644080 | None:intergenic |
| TGGACAGTGTGGATTCAAAC+AGG | 0.467278 | 1_2:+32648841 | Msa0067650:intron |
| TTCTGGAAATCCTAGTCTTG+TGG | 0.475061 | 1_2:+32645735 | Msa0067650:CDS |
| GGTGAAAACTCTCAAATCCA+TGG | 0.475673 | 1_2:+32647614 | Msa0067650:CDS |
| CAGTGGAACCTTTGCTACTA+CGG | 0.479154 | 1_2:+32643815 | Msa0067650:CDS |
| GTGGTTCGGCATCTTCTAAC+GGG | 0.481012 | 1_2:+32645793 | Msa0067650:CDS |
| GGGACGAGGAACAAAAGAAA+GGG | 0.486419 | 1_2:-32643915 | None:intergenic |
| ACTCTTTCTTTCTTAACCCA+TGG | 0.493162 | 1_2:+32643742 | Msa0067650:CDS |
| GAAGGTTTGAACTATGAGTC+TGG | 0.494548 | 1_2:-32647554 | None:intergenic |
| AACACCATTGACACTTTGAC+GGG | 0.501010 | 1_2:-32648988 | None:intergenic |
| TAGGGTTTGGATCTTTGAAT+GGG | 0.503166 | 1_2:+32649231 | Msa0067650:three_prime_UTR |
| AGGGACGAGGAACAAAAGAA+AGG | 0.514202 | 1_2:-32643916 | None:intergenic |
| TTTGAAAATTCTAATCCCCA+TGG | 0.518822 | 1_2:-32643759 | None:intergenic |
| AGTGGTTCGGCATCTTCTAA+CGG | 0.524243 | 1_2:+32645792 | Msa0067650:CDS |
| TACGGAGCAAATTGCATGGA+TGG | 0.529956 | 1_2:+32643833 | Msa0067650:CDS |
| TTGAAAATTCTAATCCCCAT+GGG | 0.533343 | 1_2:-32643758 | None:intergenic |
| CATGATGATGCTTACACAGA+TGG | 0.534443 | 1_2:+32643711 | Msa0067650:CDS |
| ATGGCCCGTCAAAGTGTCAA+TGG | 0.534454 | 1_2:+32648984 | Msa0067650:CDS |
| ACTGTAAAATGCATGAACTT+AGG | 0.534988 | 1_2:-32645855 | None:intergenic |
| TGAAATGAACCTCGCAGATG+CGG | 0.535429 | 1_2:-32643227 | None:intergenic |
| CCTTAGATCATCAGATTCAA+GGG | 0.538416 | 1_2:+32644145 | Msa0067650:CDS |
| GTATCAAATAGGTTATTGAT+GGG | 0.539064 | 1_2:+32645653 | Msa0067650:intron |
| ATACATCTATCCCAGTGGTT+CGG | 0.546060 | 1_2:+32645779 | Msa0067650:CDS |
| GTAGCAGCAGCAATGGCGAA+GGG | 0.547802 | 1_2:+32643081 | Msa0067650:exon |
| TGTATTCCTACAGATTTCAA+AGG | 0.548059 | 1_2:-32644096 | None:intergenic |
| CGTAGTAGCAAAGGTTCCAC+TGG | 0.552749 | 1_2:-32643814 | None:intergenic |
| CATTGCAGTAGCAGCAGCAA+TGG | 0.554929 | 1_2:+32643074 | Msa0067650:exon |
| AATTCTTGAACAATGTGGGC+AGG | 0.555485 | 1_2:+32649064 | Msa0067650:CDS |
| AGTAGCAGCAGCAATGGCGA+AGG | 0.558878 | 1_2:+32643080 | Msa0067650:exon |
| CCAAACCCTAGTTCCAAACA+TGG | 0.558911 | 1_2:-32649218 | None:intergenic |
| GAACCACTGGGATAGATGTA+TGG | 0.560921 | 1_2:-32645777 | None:intergenic |
| AGCTTTGAGCCTTAGCACAT+AGG | 0.561556 | 1_2:+32649455 | Msa0067650:three_prime_UTR |
| TCATCAGGCATCAAACATGT+TGG | 0.565523 | 1_2:+32649112 | Msa0067650:CDS |
| ATCTCAATTCTTGAACAATG+TGG | 0.569378 | 1_2:+32649059 | Msa0067650:CDS |
| TGTGGATTCAAACAGGAGAC+TGG | 0.570049 | 1_2:+32648848 | Msa0067650:CDS |
| GGTTTGGATCTTTGAATGGG+AGG | 0.572815 | 1_2:+32649234 | Msa0067650:three_prime_UTR |
| TCTCAATTCTTGAACAATGT+GGG | 0.576774 | 1_2:+32649060 | Msa0067650:CDS |
| AGCAGCAATCTTTGCAGAGA+CGG | 0.577835 | 1_2:-32643166 | None:intergenic |
| TCCATAGAGGGTACAAGACT+AGG | 0.579001 | 1_2:-32648936 | None:intergenic |
| GTGAAAACTCTCAAATCCAT+GGG | 0.582062 | 1_2:+32647615 | Msa0067650:CDS |
| CGCCGCCAAGAAACGCCGCA+AGG | 0.583330 | 1_2:+32643194 | Msa0067650:CDS |
| GAGTGACGTGGAACAACCCA+TGG | 0.585196 | 1_2:-32647631 | None:intergenic |
| TCATTGAAAACCACAAGACT+AGG | 0.587334 | 1_2:-32645745 | None:intergenic |
| AAATTCGATCCTATGTGCTA+AGG | 0.589192 | 1_2:-32649464 | None:intergenic |
| TGCAAGCCTTTGAAATCTGT+AGG | 0.589561 | 1_2:+32644090 | Msa0067650:CDS |
| AAATTCTACTGTCCTTCACT+CGG | 0.592857 | 1_2:-32649372 | None:intergenic |
| TGCTCGTAAGTGTCCATAGA+GGG | 0.598124 | 1_2:-32648948 | None:intergenic |
| TTAGAAGATGCCGAACCACT+GGG | 0.599594 | 1_2:-32645789 | None:intergenic |
| GGCTGCTCCGAAATTGACGC+AGG | 0.601202 | 1_2:-32647533 | None:intergenic |
| ATGCTCGTAAGTGTCCATAG+AGG | 0.603829 | 1_2:-32648949 | None:intergenic |
| AAAAGCGATACAGAACATGC+TGG | 0.607290 | 1_2:+32649029 | Msa0067650:CDS |
| CTACTACGGAGCAAATTGCA+TGG | 0.607311 | 1_2:+32643829 | Msa0067650:CDS |
| TGATGATCTAAGGAAGCACC+AGG | 0.612675 | 1_2:-32644135 | None:intergenic |
| AAGAGTGTAGGCACCACAGT+TGG | 0.615381 | 1_2:+32643528 | Msa0067650:CDS |
| TTCTCATTTCTACTCCTGAG+AGG | 0.617647 | 1_2:+32644329 | Msa0067650:CDS |
| CCTGTTAAAGAGAAGAGTGT+AGG | 0.618002 | 1_2:+32643516 | Msa0067650:CDS |
| AATTTGCTCCGTAGTAGCAA+AGG | 0.619222 | 1_2:-32643823 | None:intergenic |
| TGTTCAAGAATTGAGATGAG+TGG | 0.621965 | 1_2:-32649053 | None:intergenic |
| CATACAGTGAGTGTTCATCC+TGG | 0.622755 | 1_2:+32644117 | Msa0067650:CDS |
| TGATGCTTACACAGATGGAG+AGG | 0.628742 | 1_2:+32643716 | Msa0067650:CDS |
| AATTGCATGGATGGTTTCCG+CGG | 0.629337 | 1_2:+32643842 | Msa0067650:CDS |
| CGCGGAAAATGAAAACGTTG+AGG | 0.631559 | 1_2:+32643578 | Msa0067650:CDS |
| TTTGTTAGAAAAGAGAAACA+AGG | 0.634765 | 1_2:+32643876 | Msa0067650:CDS |
| ATTGAATGGATCATCTAGAG+AGG | 0.640210 | 1_2:-32643418 | None:intergenic |
| TTTGGAGGATATCTCTACTG+TGG | 0.642716 | 1_2:+32648884 | Msa0067650:CDS |
| TTGAATGGATCATCTAGAGA+GGG | 0.645185 | 1_2:-32643417 | None:intergenic |
| GATCCATTCAATGATAGACA+AGG | 0.648283 | 1_2:+32643429 | Msa0067650:CDS |
| GATGCTTACACAGATGGAGA+GGG | 0.649544 | 1_2:+32643717 | Msa0067650:CDS |
| ATCCATTCAATGATAGACAA+GGG | 0.650701 | 1_2:+32643430 | Msa0067650:CDS |
| CGCAAACAATATAAGTCACG+CGG | 0.652009 | 1_2:+32643560 | Msa0067650:CDS |
| TGCGCCATTTCTACCAACTG+TGG | 0.661080 | 1_2:-32643541 | None:intergenic |
| TAGAGGGTACAAGACTAGGT+AGG | 0.663694 | 1_2:-32648932 | None:intergenic |
| TCTTTCTTTCTTAACCCATG+GGG | 0.667749 | 1_2:+32643744 | Msa0067650:CDS |
| CGGAAAACGCCGCATCTGCG+AGG | 0.671477 | 1_2:+32643218 | Msa0067650:CDS |
| GGACGAGGAACAAAAGAAAG+GGG | 0.672717 | 1_2:-32643914 | None:intergenic |
| AAAGATCTGATTGACACCAG+TGG | 0.684295 | 1_2:+32643798 | Msa0067650:intron |
| CAACCATACATCTATCCCAG+TGG | 0.706500 | 1_2:+32645774 | Msa0067650:CDS |
| TGCATCAGAATCGAGTGACG+TGG | 0.708851 | 1_2:-32647643 | None:intergenic |
| CAGATGGCTGACGTTTGCTG+CGG | 0.716737 | 1_2:+32643606 | Msa0067650:intron |
| TCAAAACGAAGTACTTAACG+TGG | 0.720412 | 1_2:+32649519 | Msa0067650:three_prime_UTR |
| GACGAGGAACAAAAGAAAGG+GGG | 0.723456 | 1_2:-32643913 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTCATGATATTAT+AGG | + | chr1_2:32643377-32643396 | Msa0067650:intron | 10.0% |
| !!! | ATTTTTTTCATGATATTATA+GGG | + | chr1_2:32643378-32643397 | Msa0067650:intron | 10.0% |
| !!! | TCATTTTCTTAAATTATTAT+CGG | + | chr1_2:32644543-32644562 | Msa0067650:intron | 10.0% |
| !!! | TTATTAATTAGTTAATGTTT+TGG | + | chr1_2:32645631-32645650 | Msa0067650:intron | 10.0% |
| !! | AAGAATAATATATTAAACAT+AGG | - | chr1_2:32647349-32647368 | None:intergenic | 10.0% |
| !!! | AAAATATTTATAAAAGCATT+TGG | - | chr1_2:32647694-32647713 | None:intergenic | 10.0% |
| !!! | AAATGCTTTTATAAATATTT+TGG | + | chr1_2:32647693-32647712 | Msa0067650:intron | 10.0% |
| !! | ATAAAATAATATTGATAGAA+AGG | + | chr1_2:32648062-32648081 | Msa0067650:intron | 10.0% |
| !! | ATTATTATTTATAGAACAAA+AGG | - | chr1_2:32648573-32648592 | None:intergenic | 10.0% |
| !!! | ATAAAACTATAAAAGTATAA+AGG | - | chr1_2:32648772-32648791 | None:intergenic | 10.0% |
| !! | TAATGAAAAAAATGTATGTA+TGG | + | chr1_2:32645523-32645542 | Msa0067650:intron | 15.0% |
| !! | AATGAAAAAAATGTATGTAT+GGG | + | chr1_2:32645524-32645543 | Msa0067650:intron | 15.0% |
| !!! | ATTTATAAGTTTTCTTTTCT+TGG | - | chr1_2:32646007-32646026 | None:intergenic | 15.0% |
| !!! | ATAAATTTTGTTACTTTTGA+TGG | + | chr1_2:32646021-32646040 | Msa0067650:intron | 15.0% |
| !! | TCCAAAAAATAATCAAATAT+CGG | - | chr1_2:32646184-32646203 | None:intergenic | 15.0% |
| !!! | CTATTTTTAAAACCTTTTTA+GGG | - | chr1_2:32646737-32646756 | None:intergenic | 15.0% |
| !!! | CTAAAAAGGTTTTAAAAATA+GGG | + | chr1_2:32646736-32646755 | Msa0067650:intron | 15.0% |
| !! | TATTTGATAAAATTCAAACA+TGG | - | chr1_2:32647286-32647305 | None:intergenic | 15.0% |
| !!! | TTTTATACTACAAATCTTAA+GGG | - | chr1_2:32647384-32647403 | None:intergenic | 15.0% |
| !!! | CTTATAAACACTTATTTTTT+CGG | - | chr1_2:32647800-32647819 | None:intergenic | 15.0% |
| !! | GAAAAAATAAGTGTTTATAA+GGG | + | chr1_2:32647799-32647818 | Msa0067650:intron | 15.0% |
| !! | AAAAAATAAGTGTTTATAAG+GGG | + | chr1_2:32647800-32647819 | Msa0067650:intron | 15.0% |
| !!! | GATAATTTTTAATGCAAAAT+TGG | + | chr1_2:32648221-32648240 | Msa0067650:intron | 15.0% |
| !!! | AATGAATTTTGTTAAGGTTT+TGG | - | chr1_2:32643054-32643073 | None:intergenic | 20.0% |
| !! | TAATTTAGATTGATATGAAG+AGG | - | chr1_2:32645121-32645140 | None:intergenic | 20.0% |
| !!! | TGTATTGATTCTGAATTATT+TGG | + | chr1_2:32645271-32645290 | Msa0067650:intron | 20.0% |
| !! | AAACATGAATATTAAATGAG+GGG | - | chr1_2:32645430-32645449 | None:intergenic | 20.0% |
| !! | CAAACATGAATATTAAATGA+GGG | - | chr1_2:32645431-32645450 | None:intergenic | 20.0% |
| !! | ACAAACATGAATATTAAATG+AGG | - | chr1_2:32645432-32645451 | None:intergenic | 20.0% |
| !!! | TTAATGTTTTGGTATCAAAT+AGG | + | chr1_2:32645642-32645661 | Msa0067650:intron | 20.0% |
| !! | TTGATAGATATTCTACAAAT+AGG | - | chr1_2:32645820-32645839 | None:intergenic | 20.0% |
| !! | AACAAGATAATAAATAGTCA+AGG | - | chr1_2:32646072-32646091 | None:intergenic | 20.0% |
| !!! | CCTATTTTTAAAACCTTTTT+AGG | - | chr1_2:32646738-32646757 | None:intergenic | 20.0% |
| !!! | CCTAAAAAGGTTTTAAAAAT+AGG | + | chr1_2:32646735-32646754 | Msa0067650:intron | 20.0% |
| !!! | TTTTAAAAATAGGGTCAATT+TGG | + | chr1_2:32646745-32646764 | Msa0067650:intron | 20.0% |
| !! | TTTCTCTAAATCTATTAAGA+GGG | - | chr1_2:32647208-32647227 | None:intergenic | 20.0% |
| !!! | CTTTTATACTACAAATCTTA+AGG | - | chr1_2:32647385-32647404 | None:intergenic | 20.0% |
| !! | CGAAAAAATAAGTGTTTATA+AGG | + | chr1_2:32647798-32647817 | Msa0067650:intron | 20.0% |
| !! | ATTTGTAGCTAAAGAATAAA+AGG | + | chr1_2:32648651-32648670 | Msa0067650:intron | 20.0% |
| !! | AAATAAGTTTGTAACAGAAT+AGG | - | chr1_2:32648720-32648739 | None:intergenic | 20.0% |
| !! | GCAATGAATGAATTTTGTTA+AGG | - | chr1_2:32643060-32643079 | None:intergenic | 25.0% |
| !!! | TAGTTTCGTTTTAGTTATTC+AGG | + | chr1_2:32643267-32643286 | Msa0067650:intron | 25.0% |
| ! | ACCAAAAAACAAATTTGGAA+GGG | - | chr1_2:32643662-32643681 | None:intergenic | 25.0% |
| !!! | TTTTCAAAGCATTTTTCTAC+TGG | + | chr1_2:32643774-32643793 | Msa0067650:CDS | 25.0% |
| ! | TTTGTTAGAAAAGAGAAACA+AGG | + | chr1_2:32643876-32643895 | Msa0067650:CDS | 25.0% |
| !!! | AAAAGTTTTAATTTGTACGC+AGG | + | chr1_2:32644056-32644075 | Msa0067650:intron | 25.0% |
| ! | GTACATTCTCAAAATATTCA+TGG | - | chr1_2:32644198-32644217 | None:intergenic | 25.0% |
| !!! | GCACATAATTAGTTGTTTTA+AGG | + | chr1_2:32644220-32644239 | Msa0067650:intron | 25.0% |
| ! | TTACTCTTTACAACACTATT+AGG | - | chr1_2:32644856-32644875 | None:intergenic | 25.0% |
| ! | ATAACACGGTAATTAAAGTA+TGG | - | chr1_2:32644934-32644953 | None:intergenic | 25.0% |
| ! | AATTATACAAACTGTCTTAC+TGG | + | chr1_2:32644982-32645001 | Msa0067650:intron | 25.0% |
| ! | ATTGATATGAAGAGGAAAAA+TGG | - | chr1_2:32645113-32645132 | None:intergenic | 25.0% |
| ! | CTGTTATATAATAGAATTGG+AGG | - | chr1_2:32645332-32645351 | None:intergenic | 25.0% |
| ! | CTCCAATTCTATTATATAAC+AGG | + | chr1_2:32645330-32645349 | Msa0067650:intron | 25.0% |
| ! | GACCTGTTATATAATAGAAT+TGG | - | chr1_2:32645335-32645354 | None:intergenic | 25.0% |
| ! | AATATAGAGGAAGGATAATA+AGG | - | chr1_2:32645406-32645425 | None:intergenic | 25.0% |
| ! | AACATGAATATTAAATGAGG+GGG | - | chr1_2:32645429-32645448 | None:intergenic | 25.0% |
| ! | ATAAACATATTCTTCTGCTT+AGG | + | chr1_2:32645469-32645488 | Msa0067650:intron | 25.0% |
| ! | TAAACATATTCTTCTGCTTA+GGG | + | chr1_2:32645470-32645489 | Msa0067650:intron | 25.0% |
| !! | AACTGACTTATAAAGAATAC+AGG | - | chr1_2:32645570-32645589 | None:intergenic | 25.0% |
| ! | GTATCAAATAGGTTATTGAT+GGG | + | chr1_2:32645653-32645672 | Msa0067650:intron | 25.0% |
| ! | TCTATCAAGAAGTTTATTTC+TGG | + | chr1_2:32645718-32645737 | Msa0067650:CDS | 25.0% |
| ! | AAAACGAAACTAAAAAGGAA+TGG | - | chr1_2:32645967-32645986 | None:intergenic | 25.0% |
| !!! | TCCTTTTTAGTTTCGTTTTA+TGG | + | chr1_2:32645968-32645987 | Msa0067650:intron | 25.0% |
| ! | ACCATAAAACGAAACTAAAA+AGG | - | chr1_2:32645972-32645991 | None:intergenic | 25.0% |
| ! | TAAATAGTCAAGGCTTATAT+AGG | - | chr1_2:32646062-32646081 | None:intergenic | 25.0% |
| !!! | GCCGATATTTGATTATTTTT+TGG | + | chr1_2:32646180-32646199 | Msa0067650:intron | 25.0% |
| ! | AACATCAAAAAACAAAAGAC+AGG | + | chr1_2:32646303-32646322 | Msa0067650:intron | 25.0% |
| ! | ACATCAAAAAACAAAAGACA+GGG | + | chr1_2:32646304-32646323 | Msa0067650:intron | 25.0% |
| !! | TTTATTTCTTCTCTGTTGTA+TGG | - | chr1_2:32646390-32646409 | None:intergenic | 25.0% |
| !!! | TTCTTTGTTCTTTTTTTCGT+CGG | - | chr1_2:32646414-32646433 | None:intergenic | 25.0% |
| ! | TGAGAACAATAGAAACAAAT+TGG | + | chr1_2:32646526-32646545 | Msa0067650:intron | 25.0% |
| ! | TTCCTACTAAAATCAAATAG+CGG | + | chr1_2:32646772-32646791 | Msa0067650:intron | 25.0% |
| !!! | TGTTGTGTTGAATTTTGAAA+AGG | + | chr1_2:32647005-32647024 | Msa0067650:intron | 25.0% |
| ! | AAGAGTGAAAATTAACACAT+GGG | + | chr1_2:32647045-32647064 | Msa0067650:intron | 25.0% |
| ! | TCAAGAAAAACAACGATAAA+AGG | - | chr1_2:32647087-32647106 | None:intergenic | 25.0% |
| ! | GTTTCTCTAAATCTATTAAG+AGG | - | chr1_2:32647209-32647228 | None:intergenic | 25.0% |
| !! | CAAACCTTCTATATATTTTG+AGG | + | chr1_2:32647568-32647587 | Msa0067650:CDS | 25.0% |
| !!! | TTTCCATTTCTTTTGAGAAA+TGG | - | chr1_2:32648513-32648532 | None:intergenic | 25.0% |
| ! | TACACACAAATCTATAGTAA+TGG | + | chr1_2:32648487-32648506 | Msa0067650:intron | 25.0% |
| !!! | TTTCCATTTCTTTTGAGAAA+TGG | + | chr1_2:32648513-32648532 | Msa0067650:intron | 25.0% |
| ! | GAGGTTCAATGAAATATTAA+TGG | + | chr1_2:32648625-32648644 | Msa0067650:intron | 25.0% |
| !! | TAACTTATGTACTGTTTTGT+TGG | + | chr1_2:32648821-32648840 | Msa0067650:intron | 25.0% |
| !!! | TTAAGTACTTCGTTTTGATA+CGG | - | chr1_2:32649517-32649536 | None:intergenic | 25.0% |
| ! | AAAAGCATAACAAAAAGCTC+AGG | + | chr1_2:32643121-32643140 | Msa0067650:CDS | 30.0% |
| CTAAAACGAAACTACATAGA+CGG | - | chr1_2:32643261-32643280 | None:intergenic | 30.0% | |
| ATGTCAGTTTCTGATTCTAA+CGG | + | chr1_2:32643302-32643321 | Msa0067650:intron | 30.0% | |
| ATCCATTCAATGATAGACAA+GGG | + | chr1_2:32643430-32643449 | Msa0067650:CDS | 30.0% | |
| !!! | TCCCTTCCAAATTTGTTTTT+TGG | + | chr1_2:32643658-32643677 | Msa0067650:CDS | 30.0% |
| CACCAAAAAACAAATTTGGA+AGG | - | chr1_2:32643663-32643682 | None:intergenic | 30.0% | |
| CAGACACCAAAAAACAAATT+TGG | - | chr1_2:32643667-32643686 | None:intergenic | 30.0% | |
| TTGAAAATTCTAATCCCCAT+GGG | - | chr1_2:32643761-32643780 | None:intergenic | 30.0% | |
| TTTGAAAATTCTAATCCCCA+TGG | - | chr1_2:32643762-32643781 | None:intergenic | 30.0% | |
| CAGATAAATTTGATCTAACC+TGG | - | chr1_2:32643959-32643978 | None:intergenic | 30.0% | |
| !!! | TTTTAGAATTACCCTTGAGA+GGG | - | chr1_2:32644040-32644059 | None:intergenic | 30.0% |
| TGTATTCCTACAGATTTCAA+AGG | - | chr1_2:32644099-32644118 | None:intergenic | 30.0% | |
| !! | AAGAAGTTTGCTACCATTAA+GGG | - | chr1_2:32644259-32644278 | None:intergenic | 30.0% |
| !! | TAAGAAGTTTGCTACCATTA+AGG | - | chr1_2:32644260-32644279 | None:intergenic | 30.0% |
| TTGAAGGCAATTGATATTTC+TGG | + | chr1_2:32644370-32644389 | Msa0067650:intron | 30.0% | |
| TTCAATGTAATCATACGTGT+CGG | - | chr1_2:32644518-32644537 | None:intergenic | 30.0% | |
| AAAAACAAAGGAAGAGAAAC+CGG | - | chr1_2:32644701-32644720 | None:intergenic | 30.0% | |
| CTTTACAACACTATTAGGTA+AGG | - | chr1_2:32644851-32644870 | None:intergenic | 30.0% | |
| ! | CAACATTTAAAGTGAAAGCA+GGG | - | chr1_2:32644908-32644927 | None:intergenic | 30.0% |
| CTGCTTTCACTTTAAATGTT+GGG | + | chr1_2:32644907-32644926 | Msa0067650:intron | 30.0% | |
| AACTGAAAACAGACATAACA+CGG | - | chr1_2:32644948-32644967 | None:intergenic | 30.0% | |
| ! | ATGTCTGTTTTCAGTTCTTT+AGG | + | chr1_2:32644952-32644971 | Msa0067650:intron | 30.0% |
| GACAGTTTGTATAATTTCTG+AGG | - | chr1_2:32644978-32644997 | None:intergenic | 30.0% | |
| AAACATATTCTTCTGCTTAG+GGG | + | chr1_2:32645471-32645490 | Msa0067650:intron | 30.0% | |
| GGTATCAAATAGGTTATTGA+TGG | + | chr1_2:32645652-32645671 | Msa0067650:intron | 30.0% | |
| ACTGTAAAATGCATGAACTT+AGG | - | chr1_2:32645858-32645877 | None:intergenic | 30.0% | |
| !! | AGACGAAGATAAACTTGTTA+AGG | + | chr1_2:32645897-32645916 | Msa0067650:intron | 30.0% |
| ATTTATTGCTATGCTAGCAA+TGG | + | chr1_2:32645923-32645942 | Msa0067650:intron | 30.0% | |
| CATCAAAAAACAAAAGACAG+GGG | + | chr1_2:32646305-32646324 | Msa0067650:intron | 30.0% | |
| CATAAAACAACAGAAAACAG+AGG | + | chr1_2:32646344-32646363 | Msa0067650:intron | 30.0% | |
| AGCAAATAAAGAAAGAACAG+AGG | + | chr1_2:32646456-32646475 | Msa0067650:intron | 30.0% | |
| ACAATAGAAACAAATTGGTG+AGG | + | chr1_2:32646531-32646550 | Msa0067650:intron | 30.0% | |
| CAATAGAAACAAATTGGTGA+GGG | + | chr1_2:32646532-32646551 | Msa0067650:intron | 30.0% | |
| GTTTAAGAAATGCCCTAAAA+AGG | + | chr1_2:32646722-32646741 | Msa0067650:intron | 30.0% | |
| CAAGAGTGAAAATTAACACA+TGG | + | chr1_2:32647044-32647063 | Msa0067650:intron | 30.0% | |
| AGAGTGAAAATTAACACATG+GGG | + | chr1_2:32647046-32647065 | Msa0067650:intron | 30.0% | |
| TATACTACAAATCTTAAGGG+TGG | - | chr1_2:32647381-32647400 | None:intergenic | 30.0% | |
| ! | TTTTATAGTCAATACAGCTC+TGG | + | chr1_2:32647419-32647438 | Msa0067650:intron | 30.0% |
| CCTTCCTCAAAATATATAGA+AGG | - | chr1_2:32647575-32647594 | None:intergenic | 30.0% | |
| !! | CCTTCTATATATTTTGAGGA+AGG | + | chr1_2:32647572-32647591 | Msa0067650:CDS | 30.0% |
| ! | TGAGAGTTTTCACCAATTTA+TGG | - | chr1_2:32647608-32647627 | None:intergenic | 30.0% |
| ATGCAGCAACTATTAATGAT+AGG | + | chr1_2:32647661-32647680 | Msa0067650:CDS | 30.0% | |
| !!! | TAAGCTATGTTTTGAGATCA+TGG | - | chr1_2:32647745-32647764 | None:intergenic | 30.0% |
| GGGTTTGAAAATAGTACAAT+AGG | - | chr1_2:32647895-32647914 | None:intergenic | 30.0% | |
| !!! | TGTCTTGGTTTTGTTAACAA+TGG | + | chr1_2:32647983-32648002 | Msa0067650:intron | 30.0% |
| AAACAATAGAAAGATACCCA+AGG | - | chr1_2:32648292-32648311 | None:intergenic | 30.0% | |
| !! | ATTTCTTTTGAGAAATGGAG+AGG | - | chr1_2:32648518-32648537 | None:intergenic | 30.0% |
| TCTCCATTTCTCAAAAGAAA+TGG | + | chr1_2:32648380-32648399 | Msa0067650:intron | 30.0% | |
| TCTCCATTTCTCAAAAGAAA+TGG | - | chr1_2:32648380-32648399 | None:intergenic | 30.0% | |
| !! | ATTTCTTTTGAGAAATGGAG+AGG | + | chr1_2:32648518-32648537 | Msa0067650:intron | 30.0% |
| AACCTCTGTACTAAATTGAT+CGG | - | chr1_2:32648611-32648630 | None:intergenic | 30.0% | |
| TATAGTACAACTTGTGATAC+TGG | - | chr1_2:32648748-32648767 | None:intergenic | 30.0% | |
| ACTGGTTACAATGATTGATT+TGG | + | chr1_2:32648866-32648885 | Msa0067650:CDS | 30.0% | |
| ATATCTCTACTGTGGATATA+GGG | + | chr1_2:32648892-32648911 | Msa0067650:CDS | 30.0% | |
| ATCTCAATTCTTGAACAATG+TGG | + | chr1_2:32649059-32649078 | Msa0067650:CDS | 30.0% | |
| TCTCAATTCTTGAACAATGT+GGG | + | chr1_2:32649060-32649079 | Msa0067650:CDS | 30.0% | |
| !!! | ATGAAGATTTTTCAAGGTCT+CGG | - | chr1_2:32649096-32649115 | None:intergenic | 30.0% |
| ! | TTTCTGAAAGAGAGTCTTTA+TGG | - | chr1_2:32649301-32649320 | None:intergenic | 30.0% |
| !! | TAAGTACTTCGTTTTGATAC+GGG | - | chr1_2:32649516-32649535 | None:intergenic | 30.0% |
| !!! | TGTTAAGGTTTTGGTTTGTG+CGG | - | chr1_2:32643045-32643064 | None:intergenic | 35.0% |
| ! | CTGATTCTAACGGATAACTT+AGG | + | chr1_2:32643312-32643331 | Msa0067650:intron | 35.0% |
| TTGAATGGATCATCTAGAGA+GGG | - | chr1_2:32643420-32643439 | None:intergenic | 35.0% | |
| ATTGAATGGATCATCTAGAG+AGG | - | chr1_2:32643421-32643440 | None:intergenic | 35.0% | |
| GATCCATTCAATGATAGACA+AGG | + | chr1_2:32643429-32643448 | Msa0067650:CDS | 35.0% | |
| TTCCCTTGTCTATCATTGAA+TGG | - | chr1_2:32643435-32643454 | None:intergenic | 35.0% | |
| GAAACCGGAATTCAAAAAGA+AGG | + | chr1_2:32643452-32643471 | Msa0067650:CDS | 35.0% | |
| ! | GGATCCTTCTTTTTGAATTC+CGG | - | chr1_2:32643459-32643478 | None:intergenic | 35.0% |
| !!! | TGGGAAGGTGTTTTCTTTTT+AGG | - | chr1_2:32643480-32643499 | None:intergenic | 35.0% |
| ! | AGGAGCTTTCTTCTCTTTTT+GGG | - | chr1_2:32643499-32643518 | None:intergenic | 35.0% |
| ACTCTTTCTTTCTTAACCCA+TGG | + | chr1_2:32643742-32643761 | Msa0067650:CDS | 35.0% | |
| CTCTTTCTTTCTTAACCCAT+GGG | + | chr1_2:32643743-32643762 | Msa0067650:CDS | 35.0% | |
| TCTTTCTTTCTTAACCCATG+GGG | + | chr1_2:32643744-32643763 | Msa0067650:CDS | 35.0% | |
| !!! | CTTTTAGAATTACCCTTGAG+AGG | - | chr1_2:32644041-32644060 | None:intergenic | 35.0% |
| TCCTTAGATCATCAGATTCA+AGG | + | chr1_2:32644144-32644163 | Msa0067650:CDS | 35.0% | |
| CCTTAGATCATCAGATTCAA+GGG | + | chr1_2:32644145-32644164 | Msa0067650:CDS | 35.0% | |
| ! | TTTTCTCAGCTTACCCTTAA+TGG | + | chr1_2:32644243-32644262 | Msa0067650:intron | 35.0% |
| ! | ACAACTTTTCAGACTGTTGA+AGG | - | chr1_2:32644299-32644318 | None:intergenic | 35.0% |
| GGAGTAGAAATGAGAAATTC+AGG | - | chr1_2:32644325-32644344 | None:intergenic | 35.0% | |
| ATATCCTCTGCATGAAACAT+TGG | - | chr1_2:32644422-32644441 | None:intergenic | 35.0% | |
| TATGATGCACAAATACTCCT+CGG | + | chr1_2:32644451-32644470 | Msa0067650:intron | 35.0% | |
| AAAACAAAGGAAGAGAAACC+GGG | - | chr1_2:32644700-32644719 | None:intergenic | 35.0% | |
| ATCGTCTCTTAATTTCTTGG+TGG | + | chr1_2:32644729-32644748 | Msa0067650:intron | 35.0% | |
| AAATCAAGTGAATCCCGAAT+AGG | - | chr1_2:32644784-32644803 | None:intergenic | 35.0% | |
| ! | CCAACATTTAAAGTGAAAGC+AGG | - | chr1_2:32644909-32644928 | None:intergenic | 35.0% |
| CCTGCTTTCACTTTAAATGT+TGG | + | chr1_2:32644906-32644925 | Msa0067650:intron | 35.0% | |
| ATGAAGAGGAAAAATGGAAC+TGG | - | chr1_2:32645107-32645126 | None:intergenic | 35.0% | |
| AATCAATACAAGTCCGATTG+AGG | - | chr1_2:32645261-32645280 | None:intergenic | 35.0% | |
| ATAGAGGAAGGATAATAAGG+AGG | - | chr1_2:32645403-32645422 | None:intergenic | 35.0% | |
| TTAAATGAGGGGGAATATAG+AGG | - | chr1_2:32645419-32645438 | None:intergenic | 35.0% | |
| ! | ATCGATGCTATTTGTAAAGC+TGG | + | chr1_2:32645676-32645695 | Msa0067650:CDS | 35.0% |
| ! | TAGATTTTATTGCATCAGCG+TGG | - | chr1_2:32645702-32645721 | None:intergenic | 35.0% |
| TCATTGAAAACCACAAGACT+AGG | - | chr1_2:32645748-32645767 | None:intergenic | 35.0% | |
| CGAAACTAAAAAGGAATGGA+GGG | - | chr1_2:32645963-32645982 | None:intergenic | 35.0% | |
| ACGAAACTAAAAAGGAATGG+AGG | - | chr1_2:32645964-32645983 | None:intergenic | 35.0% | |
| !! | TATACGCTATCCTACTTTTG+GGG | - | chr1_2:32646139-32646158 | None:intergenic | 35.0% |
| !! | CTATACGCTATCCTACTTTT+GGG | - | chr1_2:32646140-32646159 | None:intergenic | 35.0% |
| AAAAGTAGGATAGCGTATAG+CGG | + | chr1_2:32646140-32646159 | Msa0067650:intron | 35.0% | |
| TATAGCGGTATGACAAATAG+CGG | + | chr1_2:32646155-32646174 | Msa0067650:intron | 35.0% | |
| AAACAACAGAAAACAGAGGA+AGG | + | chr1_2:32646348-32646367 | Msa0067650:intron | 35.0% | |
| AACCATCAAACAAAAGACAG+AGG | + | chr1_2:32646433-32646452 | Msa0067650:intron | 35.0% | |
| AACAAAATGAAGCTGAACAG+TGG | + | chr1_2:32646484-32646503 | Msa0067650:intron | 35.0% | |
| ! | TCCAGTTTGTGTTTTCCAAT+TGG | + | chr1_2:32646636-32646655 | Msa0067650:intron | 35.0% |
| TCCAATTGGAAAACACAAAC+TGG | - | chr1_2:32646640-32646659 | None:intergenic | 35.0% | |
| ACACTCTTCTATCTTCCAAT+TGG | - | chr1_2:32646654-32646673 | None:intergenic | 35.0% | |
| !! | AGATAGAAGAGTGTGTTTTG+AGG | + | chr1_2:32646660-32646679 | Msa0067650:intron | 35.0% |
| !! | AGCCGCTATTTGATTTTAGT+AGG | - | chr1_2:32646777-32646796 | None:intergenic | 35.0% |
| CTCTCTCTACAATAGACAAA+TGG | + | chr1_2:32646954-32646973 | Msa0067650:intron | 35.0% | |
| CGATAAAAGGTGAGTTAGTA+AGG | - | chr1_2:32647074-32647093 | None:intergenic | 35.0% | |
| AATCTATTAAGAGGGAAGCA+AGG | - | chr1_2:32647200-32647219 | None:intergenic | 35.0% | |
| AGAACAATGAGATCATGCAT+TGG | - | chr1_2:32647259-32647278 | None:intergenic | 35.0% | |
| GTGAAAACTCTCAAATCCAT+GGG | + | chr1_2:32647615-32647634 | Msa0067650:CDS | 35.0% | |
| GATCTCAAAACATAGCTTAC+AGG | + | chr1_2:32647746-32647765 | Msa0067650:intron | 35.0% | |
| AAAGCTGTAATAACCAACGA+TGG | - | chr1_2:32647844-32647863 | None:intergenic | 35.0% | |
| ! | CGTTGGTTATTACAGCTTTA+AGG | + | chr1_2:32647845-32647864 | Msa0067650:intron | 35.0% |
| TCAAACGCAACAATGAATTG+GGG | - | chr1_2:32647915-32647934 | None:intergenic | 35.0% | |
| GTCAAACGCAACAATGAATT+GGG | - | chr1_2:32647916-32647935 | None:intergenic | 35.0% | |
| AGTATAACAAAACAGACAGC+TGG | + | chr1_2:32648112-32648131 | Msa0067650:intron | 35.0% | |
| TGAATATTGATAGGAAGGGA+GGG | + | chr1_2:32648167-32648186 | Msa0067650:intron | 35.0% | |
| ! | TTTTTACAATCCCTGTCCTT+GGG | + | chr1_2:32648273-32648292 | Msa0067650:intron | 35.0% |
| ACCTCTGTACTAAATTGATC+GGG | - | chr1_2:32648610-32648629 | None:intergenic | 35.0% | |
| !! | GGTTACAATGATTGATTTGG+AGG | + | chr1_2:32648869-32648888 | Msa0067650:CDS | 35.0% |
| GATATCTCTACTGTGGATAT+AGG | + | chr1_2:32648891-32648910 | Msa0067650:CDS | 35.0% | |
| !!! | CGAGCATATTTTGACAAACA+TGG | + | chr1_2:32648965-32648984 | Msa0067650:CDS | 35.0% |
| AAACACCATTGACACTTTGA+CGG | - | chr1_2:32648992-32649011 | None:intergenic | 35.0% | |
| TGTTCAAGAATTGAGATGAG+TGG | - | chr1_2:32649056-32649075 | None:intergenic | 35.0% | |
| !!! | TGAAGATTTTTCAAGGTCTC+GGG | - | chr1_2:32649095-32649114 | None:intergenic | 35.0% |
| GACCTTGAAAAATCTTCATC+AGG | + | chr1_2:32649097-32649116 | Msa0067650:CDS | 35.0% | |
| ! | TGCCTGATGAAGATTTTTCA+AGG | - | chr1_2:32649102-32649121 | None:intergenic | 35.0% |
| TCACAAAGAGCTGCAAATAT+GGG | - | chr1_2:32649185-32649204 | None:intergenic | 35.0% | |
| GTTGTGATCAATTCCATGTT+TGG | + | chr1_2:32649205-32649224 | Msa0067650:three_prime_UTR | 35.0% | |
| ! | TCAATTCCATGTTTGGAACT+AGG | + | chr1_2:32649212-32649231 | Msa0067650:three_prime_UTR | 35.0% |
| ! | CAATTCCATGTTTGGAACTA+GGG | + | chr1_2:32649213-32649232 | Msa0067650:three_prime_UTR | 35.0% |
| TAGGGTTTGGATCTTTGAAT+GGG | + | chr1_2:32649231-32649250 | Msa0067650:three_prime_UTR | 35.0% | |
| !! | GGATGATTTGGTGTGATAAT+TGG | + | chr1_2:32649255-32649274 | Msa0067650:three_prime_UTR | 35.0% |
| AAATTCTACTGTCCTTCACT+CGG | - | chr1_2:32649375-32649394 | None:intergenic | 35.0% | |
| AAATTCGATCCTATGTGCTA+AGG | - | chr1_2:32649467-32649486 | None:intergenic | 35.0% | |
| ! | TCAAAACGAAGTACTTAACG+TGG | + | chr1_2:32649519-32649538 | Msa0067650:three_prime_UTR | 35.0% |
| CAATGATAGACAAGGGAAAC+CGG | + | chr1_2:32643437-32643456 | Msa0067650:CDS | 40.0% | |
| !! | GCTTTCTTCTCTTTTTGGGA+AGG | - | chr1_2:32643495-32643514 | None:intergenic | 40.0% |
| ! | CAGGAGCTTTCTTCTCTTTT+TGG | - | chr1_2:32643500-32643519 | None:intergenic | 40.0% |
| CCTACACTCTTCTCTTTAAC+AGG | - | chr1_2:32643519-32643538 | None:intergenic | 40.0% | |
| ! | CCTGTTAAAGAGAAGAGTGT+AGG | + | chr1_2:32643516-32643535 | Msa0067650:CDS | 40.0% |
| CGCAAACAATATAAGTCACG+CGG | + | chr1_2:32643560-32643579 | Msa0067650:CDS | 40.0% | |
| AAACGTTGAGGTGAATCAGA+TGG | + | chr1_2:32643590-32643609 | Msa0067650:intron | 40.0% | |
| ! | CATGATGATGCTTACACAGA+TGG | + | chr1_2:32643711-32643730 | Msa0067650:CDS | 40.0% |
| AAAGATCTGATTGACACCAG+TGG | + | chr1_2:32643798-32643817 | Msa0067650:intron | 40.0% | |
| ! | AATTTGCTCCGTAGTAGCAA+AGG | - | chr1_2:32643826-32643845 | None:intergenic | 40.0% |
| AACAAAAATATCAGCTGCCG+CGG | - | chr1_2:32643862-32643881 | None:intergenic | 40.0% | |
| !!! | AACCTGGCCAGCTTTTTTTT+CGG | - | chr1_2:32643943-32643962 | None:intergenic | 40.0% |
| TCAAAGGCTTGCAAACTGTT+CGG | - | chr1_2:32644083-32644102 | None:intergenic | 40.0% | |
| !! | TGCAAGCCTTTGAAATCTGT+AGG | + | chr1_2:32644090-32644109 | Msa0067650:CDS | 40.0% |
| CCCTTGAATCTGATGATCTA+AGG | - | chr1_2:32644148-32644167 | None:intergenic | 40.0% | |
| TTCTCATTTCTACTCCTGAG+AGG | + | chr1_2:32644329-32644348 | Msa0067650:CDS | 40.0% | |
| ! | CTTGGAGCTTGTTTCATTGA+AGG | + | chr1_2:32644354-32644373 | Msa0067650:intron | 40.0% |
| !! | TATTTCTGGCATCTCTATGC+TGG | + | chr1_2:32644384-32644403 | Msa0067650:intron | 40.0% |
| CTTTCCAATGTTTCATGCAG+AGG | + | chr1_2:32644415-32644434 | Msa0067650:intron | 40.0% | |
| CACAAATACTCCTCGGATTA+GGG | + | chr1_2:32644458-32644477 | Msa0067650:intron | 40.0% | |
| ! | ACAAATACTCCTCGGATTAG+GGG | + | chr1_2:32644459-32644478 | Msa0067650:intron | 40.0% |
| ACACGATACATATCCAACAC+CGG | - | chr1_2:32644489-32644508 | None:intergenic | 40.0% | |
| AAACAAAGGAAGAGAAACCG+GGG | - | chr1_2:32644699-32644718 | None:intergenic | 40.0% | |
| CGATCGCGAGAAAAAAACAA+AGG | - | chr1_2:32644713-32644732 | None:intergenic | 40.0% | |
| GCGATCGTCTCTTAATTTCT+TGG | + | chr1_2:32644726-32644745 | Msa0067650:intron | 40.0% | |
| GTGGTTCTTGATTTCTGTCA+TGG | + | chr1_2:32644748-32644767 | Msa0067650:intron | 40.0% | |
| ATGGTGTAGTGATGCCTATT+CGG | + | chr1_2:32644767-32644786 | Msa0067650:intron | 40.0% | |
| ACACTATTAGGTAAGGAGTG+TGG | - | chr1_2:32644844-32644863 | None:intergenic | 40.0% | |
| GTGTTGTAAAGAGTAAGCGT+AGG | + | chr1_2:32644860-32644879 | Msa0067650:intron | 40.0% | |
| TGGAACTGGTGCTCATTAAA+CGG | - | chr1_2:32645093-32645112 | None:intergenic | 40.0% | |
| ATAGGGGAACTATCAGAGAT+TGG | - | chr1_2:32645174-32645193 | None:intergenic | 40.0% | |
| ATGGGAATGGGGATAGAATA+GGG | - | chr1_2:32645191-32645210 | None:intergenic | 40.0% | |
| ATAGAATTGGAGGATACCAG+AGG | - | chr1_2:32645322-32645341 | None:intergenic | 40.0% | |
| GAGGCACACAAAGAATCATA+AGG | - | chr1_2:32645357-32645376 | None:intergenic | 40.0% | |
| CTTAGGGGAGTGACAATTAT+AGG | + | chr1_2:32645486-32645505 | Msa0067650:intron | 40.0% | |
| !! | TTCTGGAAATCCTAGTCTTG+TGG | + | chr1_2:32645735-32645754 | Msa0067650:CDS | 40.0% |
| ATACATCTATCCCAGTGGTT+CGG | + | chr1_2:32645779-32645798 | Msa0067650:CDS | 40.0% | |
| TCACACAAAGTAGTCAATCC+CGG | + | chr1_2:32646092-32646111 | Msa0067650:intron | 40.0% | |
| ! | GCTATACGCTATCCTACTTT+TGG | - | chr1_2:32646141-32646160 | None:intergenic | 40.0% |
| !! | CTCCTCTGTCTTTTGTTTGA+TGG | - | chr1_2:32646438-32646457 | None:intergenic | 40.0% |
| AGAACAGAGAAAGAGAGAAG+AGG | + | chr1_2:32646597-32646616 | Msa0067650:intron | 40.0% | |
| AATCAGAGTAGTCAATAGCC+AGG | - | chr1_2:32646924-32646943 | None:intergenic | 40.0% | |
| !! | GGGAAGCAAGGTCATTTTAA+TGG | - | chr1_2:32647188-32647207 | None:intergenic | 40.0% |
| TTGAAGTCCTGCGTCAATTT+CGG | + | chr1_2:32647526-32647545 | Msa0067650:CDS | 40.0% | |
| GAAGGTTTGAACTATGAGTC+TGG | - | chr1_2:32647557-32647576 | None:intergenic | 40.0% | |
| GGATGTCAAGTGCCATAAAT+TGG | + | chr1_2:32647593-32647612 | Msa0067650:CDS | 40.0% | |
| GGTGAAAACTCTCAAATCCA+TGG | + | chr1_2:32647614-32647633 | Msa0067650:CDS | 40.0% | |
| ATAACCAACGATGGCTGAAA+TGG | - | chr1_2:32647835-32647854 | None:intergenic | 40.0% | |
| GGTCAAACGCAACAATGAAT+TGG | - | chr1_2:32647917-32647936 | None:intergenic | 40.0% | |
| TTGTTGCGTTTGACCTACTA+AGG | + | chr1_2:32647922-32647941 | Msa0067650:intron | 40.0% | |
| TTTAGCAGTGACAACTGTCT+TGG | + | chr1_2:32647968-32647987 | Msa0067650:intron | 40.0% | |
| TGAGACTCTTGAAGAATGCA+GGG | - | chr1_2:32648010-32648029 | None:intergenic | 40.0% | |
| TTGAGACTCTTGAAGAATGC+AGG | - | chr1_2:32648011-32648030 | None:intergenic | 40.0% | |
| TCTTCAAGAGTCTCAAACAC+AGG | + | chr1_2:32648015-32648034 | Msa0067650:intron | 40.0% | |
| CTTCAAGAGTCTCAAACACA+GGG | + | chr1_2:32648016-32648035 | Msa0067650:intron | 40.0% | |
| AGGGCTGAATATTGATAGGA+AGG | + | chr1_2:32648162-32648181 | Msa0067650:intron | 40.0% | |
| GGGCTGAATATTGATAGGAA+GGG | + | chr1_2:32648163-32648182 | Msa0067650:intron | 40.0% | |
| CTGAATATTGATAGGAAGGG+AGG | + | chr1_2:32648166-32648185 | Msa0067650:intron | 40.0% | |
| AATGCAAAATTGGCTGCTGT+TGG | + | chr1_2:32648231-32648250 | Msa0067650:intron | 40.0% | |
| ! | CTTTTTACAATCCCTGTCCT+TGG | + | chr1_2:32648272-32648291 | Msa0067650:intron | 40.0% |
| TAGAAAGATACCCAAGGACA+GGG | - | chr1_2:32648286-32648305 | None:intergenic | 40.0% | |
| ATAGAAAGATACCCAAGGAC+AGG | - | chr1_2:32648287-32648306 | None:intergenic | 40.0% | |
| AATCCTCGGGATAACACAAA+CGG | - | chr1_2:32648331-32648350 | None:intergenic | 40.0% | |
| TCCCGATCAATTTAGTACAG+AGG | + | chr1_2:32648606-32648625 | Msa0067650:intron | 40.0% | |
| !! | TACTGTTTTGTTGGACAGTG+TGG | + | chr1_2:32648830-32648849 | Msa0067650:intron | 40.0% |
| TTTGGAGGATATCTCTACTG+TGG | + | chr1_2:32648884-32648903 | Msa0067650:CDS | 40.0% | |
| AACACCATTGACACTTTGAC+GGG | - | chr1_2:32648991-32649010 | None:intergenic | 40.0% | |
| ! | AGTGTCAATGGTGTTTTGCA+TGG | + | chr1_2:32648996-32649015 | Msa0067650:CDS | 40.0% |
| AAAAGCGATACAGAACATGC+TGG | + | chr1_2:32649029-32649048 | Msa0067650:CDS | 40.0% | |
| AATTCTTGAACAATGTGGGC+AGG | + | chr1_2:32649064-32649083 | Msa0067650:CDS | 40.0% | |
| TCATCAGGCATCAAACATGT+TGG | + | chr1_2:32649112-32649131 | Msa0067650:CDS | 40.0% | |
| CTCACAAAGAGCTGCAAATA+TGG | - | chr1_2:32649186-32649205 | None:intergenic | 40.0% | |
| CTAGGGTTTGGATCTTTGAA+TGG | + | chr1_2:32649230-32649249 | Msa0067650:three_prime_UTR | 40.0% | |
| CTTTGAATGGGAGGATGATT+TGG | + | chr1_2:32649243-32649262 | Msa0067650:three_prime_UTR | 40.0% | |
| ! | ATTTTCTTGTAGCCGAGTGA+AGG | + | chr1_2:32649360-32649379 | Msa0067650:three_prime_UTR | 40.0% |
| GAGTGAAGGACAGTAGAATT+TGG | + | chr1_2:32649374-32649393 | Msa0067650:three_prime_UTR | 40.0% | |
| AGCAGCAATCTTTGCAGAGA+CGG | - | chr1_2:32643169-32643188 | None:intergenic | 45.0% | |
| TGAAATGAACCTCGCAGATG+CGG | - | chr1_2:32643230-32643249 | None:intergenic | 45.0% | |
| CGCGGAAAATGAAAACGTTG+AGG | + | chr1_2:32643578-32643597 | Msa0067650:CDS | 45.0% | |
| TGATGCTTACACAGATGGAG+AGG | + | chr1_2:32643716-32643735 | Msa0067650:CDS | 45.0% | |
| GATGCTTACACAGATGGAGA+GGG | + | chr1_2:32643717-32643736 | Msa0067650:CDS | 45.0% | |
| CAGTGGAACCTTTGCTACTA+CGG | + | chr1_2:32643815-32643834 | Msa0067650:CDS | 45.0% | |
| CTACTACGGAGCAAATTGCA+TGG | + | chr1_2:32643829-32643848 | Msa0067650:CDS | 45.0% | |
| TACGGAGCAAATTGCATGGA+TGG | + | chr1_2:32643833-32643852 | Msa0067650:CDS | 45.0% | |
| AATTGCATGGATGGTTTCCG+CGG | + | chr1_2:32643842-32643861 | Msa0067650:CDS | 45.0% | |
| GACGAGGAACAAAAGAAAGG+GGG | - | chr1_2:32643916-32643935 | None:intergenic | 45.0% | |
| GGACGAGGAACAAAAGAAAG+GGG | - | chr1_2:32643917-32643936 | None:intergenic | 45.0% | |
| GGGACGAGGAACAAAAGAAA+GGG | - | chr1_2:32643918-32643937 | None:intergenic | 45.0% | |
| AGGGACGAGGAACAAAAGAA+AGG | - | chr1_2:32643919-32643938 | None:intergenic | 45.0% | |
| !!! | CTTTTTTTTCGGAAGGGACG+AGG | - | chr1_2:32643932-32643951 | None:intergenic | 45.0% |
| GTCCCTTCCGAAAAAAAAGC+TGG | + | chr1_2:32643933-32643952 | Msa0067650:CDS | 45.0% | |
| !!! | GGCCAGCTTTTTTTTCGGAA+GGG | - | chr1_2:32643938-32643957 | None:intergenic | 45.0% |
| !!! | TGGCCAGCTTTTTTTTCGGA+AGG | - | chr1_2:32643939-32643958 | None:intergenic | 45.0% |
| TTCCGAAAAAAAAGCTGGCC+AGG | + | chr1_2:32643938-32643957 | Msa0067650:CDS | 45.0% | |
| CATACAGTGAGTGTTCATCC+TGG | + | chr1_2:32644117-32644136 | Msa0067650:CDS | 45.0% | |
| !! | TGATGATCTAAGGAAGCACC+AGG | - | chr1_2:32644138-32644157 | None:intergenic | 45.0% |
| GCACAAATACTCCTCGGATT+AGG | + | chr1_2:32644457-32644476 | Msa0067650:intron | 45.0% | |
| CACGATACATATCCAACACC+GGG | - | chr1_2:32644488-32644507 | None:intergenic | 45.0% | |
| ATGAAGCACAGAGTCAGACA+CGG | - | chr1_2:32644585-32644604 | None:intergenic | 45.0% | |
| TGTCTGACTCTGTGCTTCAT+AGG | + | chr1_2:32644585-32644604 | Msa0067650:intron | 45.0% | |
| TTTAAAAGAAGACCCTCCCC+CGG | + | chr1_2:32644679-32644698 | Msa0067650:intron | 45.0% | |
| AACAAAGGAAGAGAAACCGG+GGG | - | chr1_2:32644698-32644717 | None:intergenic | 45.0% | |
| TGGTGTAGTGATGCCTATTC+GGG | + | chr1_2:32644768-32644787 | Msa0067650:intron | 45.0% | |
| TAAGCGTAGGCACGTAGTTT+AGG | + | chr1_2:32644873-32644892 | Msa0067650:intron | 45.0% | |
| !! | CCTGCTGAGTGGATTATTCA+GGG | - | chr1_2:32645025-32645044 | None:intergenic | 45.0% |
| GGAACTATCAGAGATTGGAG+GGG | - | chr1_2:32645169-32645188 | None:intergenic | 45.0% | |
| GGGAACTATCAGAGATTGGA+GGG | - | chr1_2:32645170-32645189 | None:intergenic | 45.0% | |
| TGGGAATGGGGATAGAATAG+GGG | - | chr1_2:32645190-32645209 | None:intergenic | 45.0% | |
| GATGGGAATGGGGATAGAAT+AGG | - | chr1_2:32645192-32645211 | None:intergenic | 45.0% | |
| TTCTCCTCCTTCTCCTCAAT+CGG | + | chr1_2:32645245-32645264 | Msa0067650:intron | 45.0% | |
| TACAAGTCCGATTGAGGAGA+AGG | - | chr1_2:32645255-32645274 | None:intergenic | 45.0% | |
| ATACAGTCCGTTGTTGAGGA+GGG | - | chr1_2:32645379-32645398 | None:intergenic | 45.0% | |
| AATACAGTCCGTTGTTGAGG+AGG | - | chr1_2:32645380-32645399 | None:intergenic | 45.0% | |
| AGGAATACAGTCCGTTGTTG+AGG | - | chr1_2:32645383-32645402 | None:intergenic | 45.0% | |
| ATGAGGGGGAATATAGAGGA+AGG | - | chr1_2:32645415-32645434 | None:intergenic | 45.0% | |
| CAACCATACATCTATCCCAG+TGG | + | chr1_2:32645774-32645793 | Msa0067650:CDS | 45.0% | |
| GAACCACTGGGATAGATGTA+TGG | - | chr1_2:32645780-32645799 | None:intergenic | 45.0% | |
| TTAGAAGATGCCGAACCACT+GGG | - | chr1_2:32645792-32645811 | None:intergenic | 45.0% | |
| ! | AGTGGTTCGGCATCTTCTAA+CGG | + | chr1_2:32645792-32645811 | Msa0067650:CDS | 45.0% |
| AAGTAGTCAATCCCGGATAG+CGG | + | chr1_2:32646099-32646118 | Msa0067650:intron | 45.0% | |
| ! | ACAAACTGGAAAGCACAACC+CGG | - | chr1_2:32646626-32646645 | None:intergenic | 45.0% |
| !!! | AAGAGTGTGTTTTGAGGCAC+AGG | + | chr1_2:32646666-32646685 | Msa0067650:intron | 45.0% |
| CGGTAGACTTCTCTTAAGCT+AGG | - | chr1_2:32647780-32647799 | None:intergenic | 45.0% | |
| AACCAACGCTAGACCTTAGT+AGG | - | chr1_2:32647938-32647957 | None:intergenic | 45.0% | |
| !! | TACTAAGGTCTAGCGTTGGT+TGG | + | chr1_2:32647937-32647956 | Msa0067650:intron | 45.0% |
| TCTCAAACACAGGGTGGAAT+TGG | + | chr1_2:32648025-32648044 | Msa0067650:intron | 45.0% | |
| CTCAAACACAGGGTGGAATT+GGG | + | chr1_2:32648026-32648045 | Msa0067650:intron | 45.0% | |
| CTCGAGGGCTGAATATTGAT+AGG | + | chr1_2:32648158-32648177 | Msa0067650:intron | 45.0% | |
| ATATTGATAGGAAGGGAGGG+AGG | + | chr1_2:32648170-32648189 | Msa0067650:intron | 45.0% | |
| TATTGATAGGAAGGGAGGGA+GGG | + | chr1_2:32648171-32648190 | Msa0067650:intron | 45.0% | |
| AAAAGCAATCTCCACCCACA+AGG | - | chr1_2:32648257-32648276 | None:intergenic | 45.0% | |
| TCCCTAACTTCCTTGCAACA+GGG | - | chr1_2:32648357-32648376 | None:intergenic | 45.0% | |
| ATCCCTAACTTCCTTGCAAC+AGG | - | chr1_2:32648358-32648377 | None:intergenic | 45.0% | |
| GAGGATCTTTACTCGTTGCA+AGG | + | chr1_2:32648537-32648556 | Msa0067650:intron | 45.0% | |
| TGGACAGTGTGGATTCAAAC+AGG | + | chr1_2:32648841-32648860 | Msa0067650:intron | 45.0% | |
| TGTGGATTCAAACAGGAGAC+TGG | + | chr1_2:32648848-32648867 | Msa0067650:CDS | 45.0% | |
| ! | TAGAGGGTACAAGACTAGGT+AGG | - | chr1_2:32648935-32648954 | None:intergenic | 45.0% |
| !! | ACCTAGTCTTGTACCCTCTA+TGG | + | chr1_2:32648935-32648954 | Msa0067650:CDS | 45.0% |
| ! | TCCATAGAGGGTACAAGACT+AGG | - | chr1_2:32648939-32648958 | None:intergenic | 45.0% |
| TGCTCGTAAGTGTCCATAGA+GGG | - | chr1_2:32648951-32648970 | None:intergenic | 45.0% | |
| ATGCTCGTAAGTGTCCATAG+AGG | - | chr1_2:32648952-32648971 | None:intergenic | 45.0% | |
| CCAAACCCTAGTTCCAAACA+TGG | - | chr1_2:32649221-32649240 | None:intergenic | 45.0% | |
| ! | CCATGTTTGGAACTAGGGTT+TGG | + | chr1_2:32649218-32649237 | Msa0067650:three_prime_UTR | 45.0% |
| GGTTTGGATCTTTGAATGGG+AGG | + | chr1_2:32649234-32649253 | Msa0067650:three_prime_UTR | 45.0% | |
| GGCTCAAAGCTTGTCACATA+AGG | - | chr1_2:32649446-32649465 | None:intergenic | 45.0% | |
| !! | AGCTTTGAGCCTTAGCACAT+AGG | + | chr1_2:32649455-32649474 | Msa0067650:three_prime_UTR | 45.0% |
| CATTGCAGTAGCAGCAGCAA+TGG | + | chr1_2:32643074-32643093 | Msa0067650:exon | 50.0% | |
| ! | AAGAGTGTAGGCACCACAGT+TGG | + | chr1_2:32643528-32643547 | Msa0067650:CDS | 50.0% |
| !! | GGCACCACAGTTGGTAGAAA+TGG | + | chr1_2:32643537-32643556 | Msa0067650:CDS | 50.0% |
| TGCGCCATTTCTACCAACTG+TGG | - | chr1_2:32643544-32643563 | None:intergenic | 50.0% | |
| CGTAGTAGCAAAGGTTCCAC+TGG | - | chr1_2:32643817-32643836 | None:intergenic | 50.0% | |
| TGCATCTGACACCCTCTCAA+GGG | + | chr1_2:32644026-32644045 | Msa0067650:intron | 50.0% | |
| TTCTACTCCTGAGAGGCTCT+TGG | + | chr1_2:32644336-32644355 | Msa0067650:CDS | 50.0% | |
| GTAGGCACGTAGTTTAGGTG+AGG | + | chr1_2:32644878-32644897 | Msa0067650:intron | 50.0% | |
| CCCTGAATAATCCACTCAGC+AGG | + | chr1_2:32645022-32645041 | Msa0067650:intron | 50.0% | |
| !! | GCCTGCTGAGTGGATTATTC+AGG | - | chr1_2:32645026-32645045 | None:intergenic | 50.0% |
| GACATATGTAGCCTGCTGAG+TGG | - | chr1_2:32645036-32645055 | None:intergenic | 50.0% | |
| GGGGAACTATCAGAGATTGG+AGG | - | chr1_2:32645171-32645190 | None:intergenic | 50.0% | |
| TGGAGAAGAGGATGGGAATG+GGG | - | chr1_2:32645202-32645221 | None:intergenic | 50.0% | |
| GTGGAGAAGAGGATGGGAAT+GGG | - | chr1_2:32645203-32645222 | None:intergenic | 50.0% | |
| GGAGAAGATGGAGCATGACT+AGG | - | chr1_2:32645231-32645250 | None:intergenic | 50.0% | |
| TGAGGAGAAGGAGGAGAAGA+TGG | - | chr1_2:32645243-32645262 | None:intergenic | 50.0% | |
| AAGTCCGATTGAGGAGAAGG+AGG | - | chr1_2:32645252-32645271 | None:intergenic | 50.0% | |
| TGTTCCACAATCTGTGCCTC+TGG | + | chr1_2:32645303-32645322 | Msa0067650:intron | 50.0% | |
| ! | GATACCAGAGGCACAGATTG+TGG | - | chr1_2:32645310-32645329 | None:intergenic | 50.0% |
| GTTAGAAGATGCCGAACCAC+TGG | - | chr1_2:32645793-32645812 | None:intergenic | 50.0% | |
| ! | GTGGTTCGGCATCTTCTAAC+GGG | + | chr1_2:32645793-32645812 | Msa0067650:CDS | 50.0% |
| !!! | CGCTATCCTACTTTTGGGGT+CGG | - | chr1_2:32646135-32646154 | None:intergenic | 50.0% |
| GAAGCTGAACAGTGGAAGAG+AGG | + | chr1_2:32646492-32646511 | Msa0067650:intron | 50.0% | |
| AGAAAGAGAGAAGAGGTCCC+CGG | + | chr1_2:32646604-32646623 | Msa0067650:intron | 50.0% | |
| ! | AAACTGGAAAGCACAACCCG+GGG | - | chr1_2:32646624-32646643 | None:intergenic | 50.0% |
| ! | CAAACTGGAAAGCACAACCC+GGG | - | chr1_2:32646625-32646644 | None:intergenic | 50.0% |
| AGCGGTGCAGAATCAGATAG+CGG | - | chr1_2:32646848-32646867 | None:intergenic | 50.0% | |
| CGCTACGGTAATCATCGTAG+CGG | - | chr1_2:32646866-32646885 | None:intergenic | 50.0% | |
| CGCTACGATGATTACCGTAG+CGG | + | chr1_2:32646864-32646883 | Msa0067650:intron | 50.0% | |
| TGCATCAGAATCGAGTGACG+TGG | - | chr1_2:32647646-32647665 | None:intergenic | 50.0% | |
| GACCTACTAAGGTCTAGCGT+TGG | + | chr1_2:32647933-32647952 | Msa0067650:intron | 50.0% | |
| CAAGAGTCTCAAACACAGGG+TGG | + | chr1_2:32648019-32648038 | Msa0067650:intron | 50.0% | |
| TGGCAGTGTGTGAATGGAGT+GGG | + | chr1_2:32648132-32648151 | Msa0067650:intron | 50.0% | |
| CTACCGTTTGTGTTATCCCG+AGG | + | chr1_2:32648325-32648344 | Msa0067650:intron | 50.0% | |
| TTGCAACAGGGGGAAATCCT+CGG | - | chr1_2:32648345-32648364 | None:intergenic | 50.0% | |
| CCTAACTTCCTTGCAACAGG+GGG | - | chr1_2:32648355-32648374 | None:intergenic | 50.0% | |
| CCCTAACTTCCTTGCAACAG+GGG | - | chr1_2:32648356-32648375 | None:intergenic | 50.0% | |
| CCCCTGTTGCAAGGAAGTTA+GGG | + | chr1_2:32648353-32648372 | Msa0067650:intron | 50.0% | |
| ! | ATGGCCCGTCAAAGTGTCAA+TGG | + | chr1_2:32648984-32649003 | Msa0067650:CDS | 50.0% |
| AGTAGCAGCAGCAATGGCGA+AGG | + | chr1_2:32643080-32643099 | Msa0067650:exon | 55.0% | |
| GTAGCAGCAGCAATGGCGAA+GGG | + | chr1_2:32643081-32643100 | Msa0067650:exon | 55.0% | |
| ! | CAGATGGCTGACGTTTGCTG+CGG | + | chr1_2:32643606-32643625 | Msa0067650:intron | 55.0% |
| GTGCATCTGACACCCTCTCA+AGG | + | chr1_2:32644025-32644044 | Msa0067650:intron | 55.0% | |
| ACAAGCTCCAAGAGCCTCTC+AGG | - | chr1_2:32644346-32644365 | None:intergenic | 55.0% | |
| AAGGAAGAGAAACCGGGGGA+GGG | - | chr1_2:32644694-32644713 | None:intergenic | 55.0% | |
| AAAGGAAGAGAAACCGGGGG+AGG | - | chr1_2:32644695-32644714 | None:intergenic | 55.0% | |
| GGTGGAGAAGAGGATGGGAA+TGG | - | chr1_2:32645204-32645223 | None:intergenic | 55.0% | |
| GAGCTGGTGGAGAAGAGGAT+GGG | - | chr1_2:32645209-32645228 | None:intergenic | 55.0% | |
| ACTAGGAGCTGGTGGAGAAG+AGG | - | chr1_2:32645214-32645233 | None:intergenic | 55.0% | |
| GATGGAGCATGACTAGGAGC+TGG | - | chr1_2:32645225-32645244 | None:intergenic | 55.0% | |
| TGTGCCTCCCTCCTCAACAA+CGG | + | chr1_2:32645369-32645388 | Msa0067650:intron | 55.0% | |
| TAGCAGCCGACCCCAAAAGT+AGG | + | chr1_2:32646126-32646145 | Msa0067650:intron | 55.0% | |
| GAAAGAGAGAAGAGGTCCCC+GGG | + | chr1_2:32646605-32646624 | Msa0067650:intron | 55.0% | |
| TAGCTGCTATAGCGGCGAAG+TGG | - | chr1_2:32646819-32646838 | None:intergenic | 55.0% | |
| CGCCGCTATAGCAGCTAAAG+CGG | + | chr1_2:32646822-32646841 | Msa0067650:intron | 55.0% | |
| ! | GGCCGCTTTAGCTGCTATAG+CGG | - | chr1_2:32646827-32646846 | None:intergenic | 55.0% |
| GAGTGACGTGGAACAACCCA+TGG | - | chr1_2:32647634-32647653 | None:intergenic | 55.0% | |
| ! | GCTGCCATTTCAGCCATCGT+TGG | + | chr1_2:32647828-32647847 | Msa0067650:intron | 55.0% |
| GACAGCTGGCAGTGTGTGAA+TGG | + | chr1_2:32648126-32648145 | Msa0067650:intron | 55.0% | |
| CTGGCAGTGTGTGAATGGAG+TGG | + | chr1_2:32648131-32648150 | Msa0067650:intron | 55.0% | |
| GGCAGTGTGTGAATGGAGTG+GGG | + | chr1_2:32648133-32648152 | Msa0067650:intron | 55.0% | |
| GCAGTGTGTGAATGGAGTGG+GGG | + | chr1_2:32648134-32648153 | Msa0067650:intron | 55.0% | |
| AGGGTGTAGGAGGAGGTCAT+GGG | + | chr1_2:32648190-32648209 | Msa0067650:intron | 55.0% | |
| !! | ATTGGCTGCTGTTGGCCTTG+TGG | + | chr1_2:32648239-32648258 | Msa0067650:intron | 55.0% |
| !! | TTGGCTGCTGTTGGCCTTGT+GGG | + | chr1_2:32648240-32648259 | Msa0067650:intron | 55.0% |
| TGCAACAGGGGGAAATCCTC+GGG | - | chr1_2:32648344-32648363 | None:intergenic | 55.0% | |
| GAGGATTTCCCCCTGTTGCA+AGG | + | chr1_2:32648344-32648363 | Msa0067650:intron | 55.0% | |
| CCCCCTGTTGCAAGGAAGTT+AGG | + | chr1_2:32648352-32648371 | Msa0067650:intron | 55.0% | |
| ! | CTCGCAGATGCGGCGTTTTC+CGG | - | chr1_2:32643220-32643239 | None:intergenic | 60.0% |
| GCACAGAGTCAGACACGGAG+AGG | - | chr1_2:32644580-32644599 | None:intergenic | 60.0% | |
| GGAGCTGGTGGAGAAGAGGA+TGG | - | chr1_2:32645210-32645229 | None:intergenic | 60.0% | |
| GGAGCATGACTAGGAGCTGG+TGG | - | chr1_2:32645222-32645241 | None:intergenic | 60.0% | |
| CAGTCCGTTGTTGAGGAGGG+AGG | - | chr1_2:32645376-32645395 | None:intergenic | 60.0% | |
| GCTATAGCGGCGAAGTGGAG+CGG | - | chr1_2:32646814-32646833 | None:intergenic | 60.0% | |
| GGCTGCTCCGAAATTGACGC+AGG | - | chr1_2:32647536-32647555 | None:intergenic | 60.0% | |
| TGAATGGAGTGGGGGTCTCG+AGG | + | chr1_2:32648142-32648161 | Msa0067650:intron | 60.0% | |
| GAATGGAGTGGGGGTCTCGA+GGG | + | chr1_2:32648143-32648162 | Msa0067650:intron | 60.0% | |
| ! | TAGGAAGGGAGGGAGGGTGT+AGG | + | chr1_2:32648177-32648196 | Msa0067650:intron | 60.0% |
| ! | GAGGGTGTAGGAGGAGGTCA+TGG | + | chr1_2:32648189-32648208 | Msa0067650:intron | 60.0% |
| GGCCTTGCGGCGTTTCTTGG+CGG | - | chr1_2:32643199-32643218 | None:intergenic | 65.0% | |
| GCCAAGAAACGCCGCAAGGC+CGG | + | chr1_2:32643198-32643217 | Msa0067650:CDS | 65.0% | |
| TCCGGCCTTGCGGCGTTTCT+TGG | - | chr1_2:32643202-32643221 | None:intergenic | 65.0% | |
| ! | TGCGGCGTTTTCCGGCCTTG+CGG | - | chr1_2:32643212-32643231 | None:intergenic | 65.0% |
| CGGAAAACGCCGCATCTGCG+AGG | + | chr1_2:32643218-32643237 | Msa0067650:CDS | 65.0% | |
| !! | TCCTCGGATTAGGGGCGTCC+CGG | + | chr1_2:32644467-32644486 | Msa0067650:intron | 65.0% |
| !! | GATTAGGGGCGTCCCGGTGT+TGG | + | chr1_2:32644473-32644492 | Msa0067650:intron | 65.0% |
| GCTGCTACGCACCGCTATCC+GGG | - | chr1_2:32646113-32646132 | None:intergenic | 65.0% | |
| GGCTGCTACGCACCGCTATC+CGG | - | chr1_2:32646114-32646133 | None:intergenic | 65.0% | |
| ! | TGAGGGCGAGAGCGTGACAG+AGG | + | chr1_2:32646549-32646568 | Msa0067650:intron | 65.0% |
| CGGCGAAGTGGAGCGGATAG+CGG | - | chr1_2:32646807-32646826 | None:intergenic | 65.0% | |
| GTGGCGGCAACGAACCGCTA+CGG | - | chr1_2:32646881-32646900 | None:intergenic | 65.0% | |
| TATAGCAGCCGCGCAGGGTG+TGG | - | chr1_2:32646900-32646919 | None:intergenic | 65.0% | |
| CAGGCTATAGCAGCCGCGCA+GGG | - | chr1_2:32646905-32646924 | None:intergenic | 65.0% | |
| ! | GAAGGGAGGGAGGGTGTAGG+AGG | + | chr1_2:32648180-32648199 | Msa0067650:intron | 65.0% |
| !! | GCTGCTGTTGGCCTTGTGGG+TGG | + | chr1_2:32648243-32648262 | Msa0067650:intron | 65.0% |
| CGCCGCCAAGAAACGCCGCA+AGG | + | chr1_2:32643194-32643213 | Msa0067650:CDS | 70.0% | |
| ACCGGGACGCCCCTAATCCG+AGG | - | chr1_2:32644471-32644490 | None:intergenic | 70.0% | |
| CCAGGCTATAGCAGCCGCGC+AGG | - | chr1_2:32646906-32646925 | None:intergenic | 70.0% | |
| CCTGCGCGGCTGCTATAGCC+TGG | + | chr1_2:32646903-32646922 | Msa0067650:intron | 70.0% | |
| ! | GGGAGGGAGGGTGTAGGAGG+AGG | + | chr1_2:32648183-32648202 | Msa0067650:intron | 70.0% |
| CGTTGCCGCCACACCCTGCG+CGG | + | chr1_2:32646889-32646908 | Msa0067650:intron | 75.0% | |
| AGCAGCCGCGCAGGGTGTGG+CGG | - | chr1_2:32646897-32646916 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 32643040 | 32649542 | 32643040 | ID=Msa0067650;Name=Msa0067650 |
| chr1_2 | mRNA | 32643040 | 32649542 | 32643040 | ID=Msa0067650-mRNA-1;Parent=Msa0067650;Name=Msa0067650-mRNA-1;_AED=0.08;_eAED=0.08;_QI=53|0.55|0.5|1|0.55|0.6|10|357|505 |
| chr1_2 | exon | 32643040 | 32643239 | 32643040 | ID=Msa0067650-mRNA-1:exon:10718;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32643399 | 32643599 | 32643399 | ID=Msa0067650-mRNA-1:exon:10719;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32643609 | 32643795 | 32643609 | ID=Msa0067650-mRNA-1:exon:10720;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32643802 | 32643959 | 32643802 | ID=Msa0067650-mRNA-1:exon:10721;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32644078 | 32644166 | 32644078 | ID=Msa0067650-mRNA-1:exon:10722;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32644306 | 32644363 | 32644306 | ID=Msa0067650-mRNA-1:exon:10723;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32645664 | 32645885 | 32645664 | ID=Msa0067650-mRNA-1:exon:10724;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32647522 | 32647682 | 32647522 | ID=Msa0067650-mRNA-1:exon:10725;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32648848 | 32649151 | 32648848 | ID=Msa0067650-mRNA-1:exon:10726;Parent=Msa0067650-mRNA-1 |
| chr1_2 | exon | 32649195 | 32649542 | 32649195 | ID=Msa0067650-mRNA-1:exon:10727;Parent=Msa0067650-mRNA-1 |
| chr1_2 | five_prime_UTR | 32643040 | 32643092 | 32643040 | ID=Msa0067650-mRNA-1:five_prime_utr;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32643093 | 32643239 | 32643093 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32643399 | 32643599 | 32643399 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32643609 | 32643795 | 32643609 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32643802 | 32643959 | 32643802 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32644078 | 32644166 | 32644078 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32644306 | 32644363 | 32644306 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32645664 | 32645885 | 32645664 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32647522 | 32647682 | 32647522 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | CDS | 32648848 | 32649142 | 32648848 | ID=Msa0067650-mRNA-1:cds;Parent=Msa0067650-mRNA-1 |
| chr1_2 | three_prime_UTR | 32649143 | 32649151 | 32649143 | ID=Msa0067650-mRNA-1:three_prime_utr;Parent=Msa0067650-mRNA-1 |
| chr1_2 | three_prime_UTR | 32649195 | 32649542 | 32649195 | ID=Msa0067650-mRNA-1:three_prime_utr;Parent=Msa0067650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
