Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0068920 | OMO72179.1 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 644 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0068920 | sp|Q8LSN3|FYPP_PEA | 100.000 | 303 | 0 | 0 | 1 | 303 | 1 | 303 | 0.0 | 635 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0068920 | A0A1R3HP78 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 644 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0068920 | Msa0108550 | 0.824060 | 9.902458e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0068920 | MtrunA17_Chr1g0165341 | 100.000 | 303 | 0 | 0 | 1 | 303 | 1 | 303 | 0.0 | 635 |
Msa0068920 | MtrunA17_Chr5g0445011 | 59.539 | 304 | 120 | 3 | 2 | 303 | 3 | 305 | 2.28e-138 | 393 |
Msa0068920 | MtrunA17_Chr8g0364041 | 56.954 | 302 | 129 | 1 | 2 | 303 | 6 | 306 | 4.26e-129 | 369 |
Msa0068920 | MtrunA17_Chr5g0415261 | 55.960 | 302 | 132 | 1 | 2 | 303 | 6 | 306 | 6.27e-128 | 367 |
Msa0068920 | MtrunA17_Chr8g0378521 | 60.440 | 273 | 107 | 1 | 2 | 274 | 8 | 279 | 7.69e-127 | 364 |
Msa0068920 | MtrunA17_Chr7g0268381 | 59.341 | 273 | 110 | 1 | 2 | 274 | 13 | 284 | 2.97e-126 | 362 |
Msa0068920 | MtrunA17_Chr1g0190121 | 42.652 | 279 | 157 | 3 | 15 | 292 | 25 | 301 | 1.91e-90 | 272 |
Msa0068920 | MtrunA17_Chr8g0387541 | 41.158 | 311 | 168 | 6 | 3 | 300 | 6 | 314 | 4.01e-90 | 271 |
Msa0068920 | MtrunA17_Chr1g0186811 | 45.627 | 263 | 140 | 3 | 15 | 276 | 25 | 285 | 5.66e-90 | 271 |
Msa0068920 | MtrunA17_Chr5g0436061 | 42.657 | 286 | 161 | 3 | 7 | 291 | 34 | 317 | 7.36e-90 | 270 |
Msa0068920 | MtrunA17_Chr7g0274931 | 42.294 | 279 | 158 | 3 | 15 | 292 | 25 | 301 | 4.97e-89 | 268 |
Msa0068920 | MtrunA17_Chr8g0334361 | 43.346 | 263 | 146 | 3 | 15 | 276 | 23 | 283 | 2.21e-88 | 266 |
Msa0068920 | MtrunA17_Chr7g0272371 | 44.643 | 280 | 147 | 4 | 3 | 276 | 10 | 287 | 5.54e-88 | 265 |
Msa0068920 | MtrunA17_Chr1g0167751 | 44.487 | 263 | 143 | 3 | 15 | 276 | 25 | 285 | 4.21e-87 | 263 |
Msa0068920 | MtrunA17_Chr3g0097231 | 45.106 | 235 | 125 | 4 | 40 | 272 | 216 | 448 | 9.51e-58 | 192 |
Msa0068920 | MtrunA17_Chr2g0322121 | 36.585 | 287 | 163 | 7 | 6 | 276 | 654 | 937 | 3.23e-53 | 187 |
Msa0068920 | MtrunA17_Chr2g0330331 | 42.460 | 252 | 136 | 6 | 28 | 272 | 65 | 314 | 4.53e-53 | 177 |
Msa0068920 | MtrunA17_Chr2g0330311 | 43.220 | 236 | 128 | 6 | 40 | 272 | 243 | 475 | 1.05e-51 | 177 |
Msa0068920 | MtrunA17_Chr4g0025471 | 36.029 | 272 | 159 | 6 | 19 | 276 | 672 | 942 | 4.37e-51 | 181 |
Msa0068920 | MtrunA17_Chr8g0369981 | 34.589 | 292 | 129 | 12 | 28 | 259 | 105 | 394 | 1.53e-35 | 133 |
Msa0068920 | MtrunA17_Chr1g0196211 | 35.393 | 178 | 106 | 5 | 100 | 269 | 4 | 180 | 5.22e-30 | 114 |
Msa0068920 | MtrunA17_Chr2g0330011 | 47.788 | 113 | 49 | 4 | 31 | 134 | 242 | 353 | 4.45e-20 | 89.0 |
Msa0068920 | MtrunA17_Chr1g0196221 | 45.882 | 85 | 40 | 1 | 20 | 98 | 552 | 636 | 3.99e-16 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0068920 | AT1G50370.1 | 98.020 | 303 | 6 | 0 | 1 | 303 | 1 | 303 | 0.0 | 627 |
Msa0068920 | AT3G19980.1 | 97.690 | 303 | 7 | 0 | 1 | 303 | 1 | 303 | 0.0 | 625 |
Msa0068920 | AT4G26720.1 | 61.765 | 306 | 110 | 4 | 2 | 303 | 3 | 305 | 3.28e-144 | 408 |
Msa0068920 | AT5G55260.1 | 60.197 | 304 | 118 | 3 | 2 | 303 | 3 | 305 | 1.59e-141 | 401 |
Msa0068920 | AT5G55260.2 | 53.043 | 345 | 118 | 4 | 2 | 303 | 3 | 346 | 8.04e-133 | 381 |
Msa0068920 | AT1G69960.1 | 56.623 | 302 | 130 | 1 | 2 | 303 | 7 | 307 | 7.71e-130 | 372 |
Msa0068920 | AT1G10430.2 | 56.954 | 302 | 129 | 1 | 2 | 303 | 6 | 306 | 2.32e-129 | 370 |
Msa0068920 | AT1G10430.1 | 56.954 | 302 | 129 | 1 | 2 | 303 | 6 | 306 | 2.32e-129 | 370 |
Msa0068920 | AT3G58500.1 | 56.436 | 303 | 131 | 1 | 1 | 303 | 12 | 313 | 4.34e-129 | 370 |
Msa0068920 | AT2G42500.1 | 56.436 | 303 | 131 | 1 | 1 | 303 | 12 | 313 | 8.17e-129 | 369 |
Msa0068920 | AT1G59830.1 | 56.623 | 302 | 130 | 1 | 2 | 303 | 6 | 306 | 3.20e-128 | 368 |
Msa0068920 | AT1G59830.2 | 59.504 | 242 | 98 | 0 | 2 | 243 | 6 | 247 | 2.92e-110 | 320 |
Msa0068920 | AT2G42500.2 | 52.107 | 261 | 123 | 2 | 44 | 303 | 7 | 266 | 3.84e-97 | 287 |
Msa0068920 | AT2G29400.1 | 44.565 | 276 | 151 | 2 | 15 | 290 | 42 | 315 | 1.19e-92 | 278 |
Msa0068920 | AT2G39840.1 | 44.718 | 284 | 144 | 4 | 15 | 287 | 39 | 320 | 9.41e-91 | 273 |
Msa0068920 | AT5G27840.1 | 45.714 | 280 | 144 | 4 | 3 | 276 | 14 | 291 | 3.22e-90 | 271 |
Msa0068920 | AT5G27840.2 | 45.714 | 280 | 144 | 4 | 3 | 276 | 14 | 291 | 8.17e-90 | 271 |
Msa0068920 | AT5G27840.3 | 45.714 | 280 | 144 | 4 | 3 | 276 | 14 | 291 | 8.17e-90 | 271 |
Msa0068920 | AT5G27840.4 | 45.714 | 280 | 144 | 4 | 3 | 276 | 14 | 291 | 8.39e-90 | 271 |
Msa0068920 | AT4G11240.1 | 42.230 | 296 | 163 | 5 | 10 | 300 | 22 | 314 | 1.91e-89 | 270 |
Msa0068920 | AT5G43380.1 | 42.321 | 293 | 161 | 4 | 15 | 301 | 25 | 315 | 5.31e-89 | 269 |
Msa0068920 | AT5G43380.2 | 42.321 | 293 | 161 | 4 | 15 | 301 | 25 | 315 | 8.16e-89 | 268 |
Msa0068920 | AT5G43380.3 | 42.321 | 293 | 161 | 4 | 15 | 301 | 25 | 315 | 8.28e-89 | 268 |
Msa0068920 | AT5G59160.3 | 45.038 | 262 | 141 | 3 | 16 | 276 | 36 | 295 | 9.95e-89 | 268 |
Msa0068920 | AT5G59160.2 | 45.038 | 262 | 141 | 3 | 16 | 276 | 36 | 295 | 9.95e-89 | 268 |
Msa0068920 | AT5G59160.1 | 45.038 | 262 | 141 | 3 | 16 | 276 | 36 | 295 | 9.95e-89 | 268 |
Msa0068920 | AT3G46820.1 | 44.928 | 276 | 148 | 4 | 3 | 276 | 22 | 295 | 1.11e-88 | 267 |
Msa0068920 | AT1G64040.1 | 41.581 | 291 | 163 | 4 | 15 | 300 | 26 | 314 | 1.05e-87 | 265 |
Msa0068920 | AT3G05580.1 | 44.286 | 280 | 148 | 4 | 3 | 276 | 14 | 291 | 4.54e-87 | 263 |
Msa0068920 | AT3G05580.2 | 45.833 | 240 | 123 | 3 | 3 | 236 | 14 | 252 | 4.35e-77 | 236 |
Msa0068920 | AT2G42500.4 | 59.877 | 162 | 62 | 1 | 1 | 159 | 12 | 173 | 2.13e-66 | 206 |
Msa0068920 | AT2G42500.5 | 60.119 | 168 | 62 | 2 | 1 | 165 | 12 | 177 | 2.25e-66 | 206 |
Msa0068920 | AT2G42500.3 | 62.338 | 154 | 55 | 1 | 1 | 151 | 12 | 165 | 5.91e-66 | 204 |
Msa0068920 | AT2G42810.1 | 44.255 | 235 | 127 | 4 | 40 | 272 | 218 | 450 | 1.49e-59 | 197 |
Msa0068920 | AT2G42810.5 | 44.255 | 235 | 127 | 4 | 40 | 272 | 218 | 450 | 1.49e-59 | 197 |
Msa0068920 | AT2G42810.4 | 44.255 | 235 | 127 | 4 | 40 | 272 | 218 | 450 | 1.49e-59 | 197 |
Msa0068920 | AT2G42810.3 | 44.255 | 235 | 127 | 4 | 40 | 272 | 271 | 503 | 5.94e-59 | 197 |
Msa0068920 | AT2G42810.2 | 44.255 | 235 | 127 | 4 | 40 | 272 | 272 | 504 | 6.73e-59 | 197 |
Msa0068920 | AT1G03445.2 | 39.706 | 272 | 146 | 8 | 20 | 276 | 480 | 748 | 9.49e-56 | 193 |
Msa0068920 | AT1G03445.1 | 39.706 | 272 | 146 | 8 | 20 | 276 | 480 | 748 | 1.06e-55 | 192 |
Msa0068920 | AT4G03080.1 | 38.376 | 271 | 152 | 6 | 20 | 276 | 554 | 823 | 3.44e-54 | 189 |
Msa0068920 | AT2G27210.2 | 35.315 | 286 | 168 | 7 | 6 | 276 | 660 | 943 | 5.54e-50 | 178 |
Msa0068920 | AT2G27210.1 | 35.315 | 286 | 168 | 7 | 6 | 276 | 665 | 948 | 6.33e-50 | 177 |
Msa0068920 | AT1G08420.2 | 34.965 | 286 | 169 | 7 | 6 | 276 | 671 | 954 | 3.02e-49 | 176 |
Msa0068920 | AT1G08420.1 | 34.965 | 286 | 169 | 7 | 6 | 276 | 676 | 959 | 3.07e-49 | 176 |
Msa0068920 | AT5G63870.1 | 35.075 | 268 | 121 | 9 | 43 | 259 | 77 | 342 | 1.14e-31 | 122 |
Msa0068920 | AT5G63870.2 | 35.075 | 268 | 121 | 9 | 43 | 259 | 77 | 342 | 1.14e-31 | 122 |
Msa0068920 | AT1G48120.1 | 32.226 | 301 | 140 | 9 | 19 | 259 | 629 | 925 | 2.73e-30 | 121 |
Msa0068920 | AT5G63870.3 | 37.500 | 216 | 96 | 7 | 43 | 221 | 77 | 290 | 9.71e-29 | 112 |
Msa0068920 | AT5G10900.3 | 31.646 | 237 | 135 | 7 | 24 | 235 | 199 | 433 | 5.91e-24 | 102 |
Msa0068920 | AT5G10900.2 | 31.646 | 237 | 135 | 7 | 24 | 235 | 199 | 433 | 6.33e-24 | 102 |
Msa0068920 | AT5G10900.1 | 31.646 | 237 | 135 | 7 | 24 | 235 | 199 | 433 | 6.43e-24 | 102 |
Find 76 sgRNAs with CRISPR-Local
Find 487 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCCATATTTCTTATAATT+TGG | 0.153299 | 1_2:+36235046 | Msa0068920:exon |
TCCTCCTTCTCCTCTTGTTT+TGG | 0.161284 | 1_2:+36228129 | Msa0068920:five_prime_UTR |
AAACTAGAATGTTCAATATT+TGG | 0.194606 | 1_2:-36235217 | None:intergenic |
TTGTAAAATTATGCAGTAAA+TGG | 0.198566 | 1_2:+36235089 | Msa0068920:three_prime_UTR |
TCTTAGTTTCAATGAAAATA+TGG | 0.227077 | 1_2:+36232746 | Msa0068920:CDS |
CCACAACGGTAACAATAATT+AGG | 0.237846 | 1_2:-36232708 | None:intergenic |
GTGTGAGTTGTCTACTTTCA+TGG | 0.258082 | 1_2:-36229499 | None:intergenic |
TCGCCAAATTATAAGAAATA+TGG | 0.270446 | 1_2:-36235049 | None:intergenic |
ACACTTTCTGCAATTATAGA+TGG | 0.279913 | 1_2:+36230307 | Msa0068920:CDS |
TTTCATGGTTTCCACGTAGA+AGG | 0.307041 | 1_2:-36229484 | None:intergenic |
AAATGGCTTTCTATTATGAT+TGG | 0.333907 | 1_2:+36235106 | Msa0068920:three_prime_UTR |
GATGAATGCCAGAGAAAGTA+TGG | 0.349004 | 1_2:+36230238 | Msa0068920:CDS |
ATGTCACCACAAACAGTTAC+TGG | 0.360532 | 1_2:-36228735 | None:intergenic |
ACCCAGGTGCTTTGTGTTCA+CGG | 0.361024 | 1_2:+36230472 | Msa0068920:intron |
TAGCATTTCCATACTTTCTC+TGG | 0.362451 | 1_2:-36230246 | None:intergenic |
AAGTACATGTTCCAAGATAA+AGG | 0.383237 | 1_2:+36232125 | Msa0068920:CDS |
CAGTTACAAGGCCTTTATCT+TGG | 0.389398 | 1_2:-36232136 | None:intergenic |
TGGTCAATTGTTCTGATGTC+TGG | 0.394556 | 1_2:-36230505 | None:intergenic |
GCCCATGTTTCAATATCTTC+AGG | 0.398413 | 1_2:-36231910 | None:intergenic |
CGGGCACGTGCCCACCGGTC+TGG | 0.402939 | 1_2:-36228791 | None:intergenic |
CGTAGAAGGGTTATATTAGC+AGG | 0.427554 | 1_2:-36229470 | None:intergenic |
TCTCTTCTCTTCTCTTCCCT+CGG | 0.428935 | 1_2:-36228171 | None:intergenic |
CTCCACATAAGATCACAAAA+TGG | 0.447030 | 1_2:-36231883 | None:intergenic |
AATAGTTGTTAGCAGTAGAA+AGG | 0.458856 | 1_2:+36228072 | Msa0068920:five_prime_UTR |
GGTTAAAGAGATCTTAATTG+AGG | 0.467806 | 1_2:+36228686 | Msa0068920:intron |
CTTTAACCTTCGAGATCCAT+TGG | 0.482031 | 1_2:-36228234 | None:intergenic |
ACTGTTTGTGGTGACATTCA+TGG | 0.492582 | 1_2:+36228741 | Msa0068920:CDS |
CCTAATTATTGTTACCGTTG+TGG | 0.493473 | 1_2:+36232708 | Msa0068920:CDS |
GCAGTCAGTCCACGTGGAGC+TGG | 0.503063 | 1_2:+36231931 | Msa0068920:CDS |
TTCAGATGCTTACAGTTACA+AGG | 0.508425 | 1_2:-36232148 | None:intergenic |
CGGATCCCGGGTTACATCTG+AGG | 0.510087 | 1_2:+36231963 | Msa0068920:CDS |
AAATATGGAACACCTGTCCT+AGG | 0.510145 | 1_2:-36235034 | None:intergenic |
ACCTAGCTTTAAGAAGCAAA+AGG | 0.522956 | 1_2:-36228982 | None:intergenic |
TTCATGGTTTCCACGTAGAA+GGG | 0.527118 | 1_2:-36229483 | None:intergenic |
AGTCTCGGGCACGTGCCCAC+CGG | 0.531838 | 1_2:-36228796 | None:intergenic |
CTAGAATGTTCAATATTTGG+TGG | 0.536035 | 1_2:-36235214 | None:intergenic |
AATAGTCCAGTAACTGTTTG+TGG | 0.542664 | 1_2:+36228729 | Msa0068920:CDS |
ACAATCAGATGAGAGGGCCT+AGG | 0.546455 | 1_2:+36235017 | Msa0068920:CDS |
ATACCCAAAACAAGAGGAGA+AGG | 0.551498 | 1_2:-36228133 | None:intergenic |
TTGTTCTGATGTCTGGAGAA+AGG | 0.553674 | 1_2:-36230498 | None:intergenic |
CAGATGAGAGGGCCTAGGAC+AGG | 0.555018 | 1_2:+36235022 | Msa0068920:CDS |
ACAGTTACTGGACTATTCAC+AGG | 0.560124 | 1_2:-36228723 | None:intergenic |
TCAGTCCACGTGGAGCTGGT+TGG | 0.561248 | 1_2:+36231935 | Msa0068920:CDS |
AGTATGGAAATGCTAATGCT+TGG | 0.570861 | 1_2:+36230254 | Msa0068920:CDS |
AGGAGAACAATCAGATGAGA+GGG | 0.574421 | 1_2:+36235011 | Msa0068920:CDS |
TTATGTTAAAATAGCTAGCA+AGG | 0.576226 | 1_2:+36228018 | None:intergenic |
GTTCGTCTTCGAGAAGATGT+TGG | 0.585150 | 1_2:-36228261 | None:intergenic |
TGGATCTCGAAGGTTAAAGA+TGG | 0.588605 | 1_2:+36228238 | Msa0068920:CDS |
TCCTGAAGATATTGAAACAT+GGG | 0.588789 | 1_2:+36231909 | Msa0068920:CDS |
CCCAAAACAAGAGGAGAAGG+AGG | 0.595308 | 1_2:-36228130 | None:intergenic |
GAGGAGAACAATCAGATGAG+AGG | 0.609057 | 1_2:+36235010 | Msa0068920:CDS |
GAGATATGGATTTGGACCAA+TGG | 0.609365 | 1_2:+36228218 | Msa0068920:exon |
GCACATCAACTTGTACAAGA+AGG | 0.609781 | 1_2:+36232098 | Msa0068920:CDS |
TCACAAAATGGCCCCTCGTG+AGG | 0.613649 | 1_2:-36231871 | None:intergenic |
TAGGGTGACTTTGTTGATCG+CGG | 0.614888 | 1_2:+36228932 | Msa0068920:intron |
GTTGATGTGCTCGACAAACA+AGG | 0.619450 | 1_2:-36232085 | None:intergenic |
ATCCTGAAGATATTGAAACA+TGG | 0.620272 | 1_2:+36231908 | Msa0068920:CDS |
ACATTACCTCAGATGTAACC+CGG | 0.622692 | 1_2:-36231969 | None:intergenic |
GAACTGTGAAATTCCTCACG+AGG | 0.623314 | 1_2:+36231858 | Msa0068920:CDS |
AGCTTTAAGAAGCAAAAGGA+TGG | 0.627769 | 1_2:-36228978 | None:intergenic |
GTGCTCGACAAACAAGGTCA+AGG | 0.639424 | 1_2:-36232079 | None:intergenic |
AACTGTGAAATTCCTCACGA+GGG | 0.643578 | 1_2:+36231859 | Msa0068920:CDS |
GTAGAAGGGTTATATTAGCA+GGG | 0.645634 | 1_2:-36229469 | None:intergenic |
TTTGGACCAATGGATCTCGA+AGG | 0.650316 | 1_2:+36228228 | Msa0068920:CDS |
GACAGATAAGAGTCATTGAG+CGG | 0.664068 | 1_2:+36231836 | Msa0068920:intron |
CATTACCTCAGATGTAACCC+GGG | 0.673485 | 1_2:-36231968 | None:intergenic |
AGACATCAGAACAATTGACC+AGG | 0.675885 | 1_2:+36230507 | Msa0068920:CDS |
TGTAAGATAGTCGAAAACAT+CGG | 0.682696 | 1_2:-36230287 | None:intergenic |
ACATGGGCAGTCAGTCCACG+TGG | 0.685712 | 1_2:+36231925 | Msa0068920:CDS |
ACTGTGAAATTCCTCACGAG+GGG | 0.691236 | 1_2:+36231860 | Msa0068920:CDS |
ACAGTGTTAGTCATGTATTG+TGG | 0.694157 | 1_2:+36235129 | Msa0068920:three_prime_UTR |
TGAAAGTAGACAACTCACAC+AGG | 0.696061 | 1_2:+36229502 | Msa0068920:CDS |
GCTAATATAACCCTTCTACG+TGG | 0.714294 | 1_2:+36229473 | Msa0068920:CDS |
TAGAAGCTACATTTCCACAA+CGG | 0.718445 | 1_2:-36232722 | None:intergenic |
AAAAGCCAACCAGCTCCACG+TGG | 0.718658 | 1_2:-36231940 | None:intergenic |
CAGGTGCTTTGTGTTCACGG+TGG | 0.738287 | 1_2:+36230475 | Msa0068920:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCTATAATAAACTATATTT+CGG | - | chr1_2:36229194-36229213 | None:intergenic | 10.0% |
!!! | CTTTATTTGTTAAAATAAAT+TGG | + | chr1_2:36229801-36229820 | Msa0068920:intron | 10.0% |
!!! | CAATAACTTTTTTTTTTTTT+TGG | + | chr1_2:36231613-36231632 | Msa0068920:intron | 10.0% |
!!! | TACTTTTTAAGTATATTTTA+AGG | + | chr1_2:36232789-36232808 | Msa0068920:intron | 10.0% |
!! | AAAAATACTAAAACAAAAAT+AGG | - | chr1_2:36235188-36235207 | None:intergenic | 10.0% |
!! | TATTATCATTATTATCGTTA+GGG | + | chr1_2:36228517-36228536 | Msa0068920:intron | 15.0% |
!! | ATTATTATTATGAATGTTTC+AGG | + | chr1_2:36228665-36228684 | Msa0068920:intron | 15.0% |
!! | TAGTTTATTATAGAACATTA+CGG | + | chr1_2:36229199-36229218 | Msa0068920:intron | 15.0% |
!!! | ATATGTATCTTTTCAATAAA+AGG | + | chr1_2:36230060-36230079 | Msa0068920:intron | 15.0% |
!! | ATTAATTTATTTATCCAAAC+AGG | - | chr1_2:36230603-36230622 | None:intergenic | 15.0% |
!!! | TTTATTTTATCTTAGAGTTT+TGG | - | chr1_2:36230686-36230705 | None:intergenic | 15.0% |
!!! | TTTTGCTTAATTTTAAAACA+AGG | - | chr1_2:36230949-36230968 | None:intergenic | 15.0% |
!!! | TTGATTCTTACTTTTTAAAA+AGG | + | chr1_2:36231769-36231788 | Msa0068920:intron | 15.0% |
!!! | TCAATATTTTCAAATAAAAC+TGG | - | chr1_2:36232645-36232664 | None:intergenic | 15.0% |
!!! | AGTTTTATTTGAAAATATTG+AGG | + | chr1_2:36232644-36232663 | Msa0068920:intron | 15.0% |
!! | AAAAATCAATAAAATTGCAA+AGG | + | chr1_2:36233469-36233488 | Msa0068920:intron | 15.0% |
!!! | AAAATATTAGTCTATTAATG+AGG | + | chr1_2:36233579-36233598 | Msa0068920:intron | 15.0% |
!!! | ACTATTTATTTTCTGTTTTT+AGG | - | chr1_2:36234052-36234071 | None:intergenic | 15.0% |
!! | TAAAAACAGAAAATAAATAG+TGG | + | chr1_2:36234051-36234070 | Msa0068920:intron | 15.0% |
!! | AAAAACAGAAAATAAATAGT+GGG | + | chr1_2:36234052-36234071 | Msa0068920:intron | 15.0% |
!! | TTATTGAGTAAAATTTATGT+AGG | - | chr1_2:36234424-36234443 | None:intergenic | 15.0% |
!!! | ATTTATTTGATTTGATCTTA+AGG | + | chr1_2:36234757-36234776 | Msa0068920:intron | 15.0% |
!! | CTATTATCATTATTATCGTT+AGG | + | chr1_2:36228516-36228535 | Msa0068920:intron | 20.0% |
!!! | ATAAAAATGTAATTAGTCTC+GGG | - | chr1_2:36228813-36228832 | None:intergenic | 20.0% |
!!! | CATAAAAATGTAATTAGTCT+CGG | - | chr1_2:36228814-36228833 | None:intergenic | 20.0% |
!! | TATGTTATGTTATGTATTGT+TGG | + | chr1_2:36228848-36228867 | Msa0068920:intron | 20.0% |
!! | TTTGTGACTTTCTAATTTAT+TGG | + | chr1_2:36229077-36229096 | Msa0068920:intron | 20.0% |
!! | TGATTTAGAAATTAATGAGT+TGG | + | chr1_2:36229167-36229186 | Msa0068920:intron | 20.0% |
!!! | ATAATTGATTCAGTAATGTA+AGG | + | chr1_2:36229839-36229858 | Msa0068920:intron | 20.0% |
!! | GTAAGAAATGTCTAAATTTA+TGG | + | chr1_2:36229908-36229927 | Msa0068920:intron | 20.0% |
!! | TACACAAAATTAACATCAAT+TGG | - | chr1_2:36230187-36230206 | None:intergenic | 20.0% |
!! | GTAAGAAATAATAAACGAAA+GGG | - | chr1_2:36231370-36231389 | None:intergenic | 20.0% |
!! | TAAAGTGAAAAGTAAAAACA+GGG | - | chr1_2:36231410-36231429 | None:intergenic | 20.0% |
!! | ATAAAGTGAAAAGTAAAAAC+AGG | - | chr1_2:36231411-36231430 | None:intergenic | 20.0% |
!!! | AATAGTCCAATTAATGATTT+TGG | + | chr1_2:36232277-36232296 | Msa0068920:intron | 20.0% |
!!! | ATAGTCCAATTAATGATTTT+GGG | + | chr1_2:36232278-36232297 | Msa0068920:intron | 20.0% |
!! | TGAAAATATTGAGGTAAAAA+AGG | + | chr1_2:36232653-36232672 | Msa0068920:intron | 20.0% |
!!! | GGTATTTTTTTTAAATTTGC+AGG | + | chr1_2:36232674-36232693 | Msa0068920:intron | 20.0% |
!!! | TTTTTTTAAATTTGCAGGTA+TGG | + | chr1_2:36232679-36232698 | Msa0068920:intron | 20.0% |
!! | TCTTAGTTTCAATGAAAATA+TGG | + | chr1_2:36232746-36232765 | Msa0068920:CDS | 20.0% |
!! | TCTTGATTTATTTAACATGA+AGG | - | chr1_2:36232947-36232966 | None:intergenic | 20.0% |
!!! | TTATATTTGTTGGAATTAAG+AGG | + | chr1_2:36232996-36233015 | Msa0068920:intron | 20.0% |
!! | AGGAATATATAAACTAAAGT+AGG | + | chr1_2:36233715-36233734 | Msa0068920:intron | 20.0% |
!! | TGACTATCAACATTATTATT+TGG | + | chr1_2:36234258-36234277 | Msa0068920:intron | 20.0% |
!!! | TATTATTTGGTTTGCATTTT+TGG | + | chr1_2:36234271-36234290 | Msa0068920:intron | 20.0% |
!!! | CTTTATTTAACTATTGGATA+TGG | - | chr1_2:36234545-36234564 | None:intergenic | 20.0% |
!!! | TAGTGACTTTATTTAACTAT+TGG | - | chr1_2:36234551-36234570 | None:intergenic | 20.0% |
!! | AGTCACTAAATAAAATTGAA+AGG | + | chr1_2:36234563-36234582 | Msa0068920:intron | 20.0% |
!! | GTCACTAAATAAAATTGAAA+GGG | + | chr1_2:36234564-36234583 | Msa0068920:intron | 20.0% |
!! | TCACTAAATAAAATTGAAAG+GGG | + | chr1_2:36234565-36234584 | Msa0068920:intron | 20.0% |
!!! | TTGAACTAATTTGCAATTTT+TGG | + | chr1_2:36234628-36234647 | Msa0068920:intron | 20.0% |
!! | ATCAAATCAAATAAATAGCA+GGG | - | chr1_2:36234753-36234772 | None:intergenic | 20.0% |
!! | GTTCCATATTTCTTATAATT+TGG | + | chr1_2:36235046-36235065 | Msa0068920:exon | 20.0% |
!! | TTGTAAAATTATGCAGTAAA+TGG | + | chr1_2:36235089-36235108 | Msa0068920:three_prime_UTR | 20.0% |
!! | AAACTAGAATGTTCAATATT+TGG | - | chr1_2:36235220-36235239 | None:intergenic | 20.0% |
!!! | TGTGAATTATTTTTGTTGAC+TGG | + | chr1_2:36228043-36228062 | Msa0068920:five_prime_UTR | 25.0% |
!!! | AATTATTTTTGTTGACTGGA+GGG | + | chr1_2:36228047-36228066 | Msa0068920:five_prime_UTR | 25.0% |
! | ACAAAACAAAAAGTGAGATA+TGG | + | chr1_2:36228204-36228223 | Msa0068920:exon | 25.0% |
!! | CGAGACTAATTACATTTTTA+TGG | + | chr1_2:36228812-36228831 | Msa0068920:CDS | 25.0% |
!!! | TGTGTTGATTAATGTGTTTT+AGG | + | chr1_2:36228913-36228932 | Msa0068920:intron | 25.0% |
!!! | GTGTTGATTAATGTGTTTTA+GGG | + | chr1_2:36228914-36228933 | Msa0068920:intron | 25.0% |
!! | ACCACACAGATAATAATTTT+AGG | + | chr1_2:36229142-36229161 | Msa0068920:intron | 25.0% |
! | TCCTAAAATTATTATCTGTG+TGG | - | chr1_2:36229146-36229165 | None:intergenic | 25.0% |
! | ATCTTGAATGTTAGAGTTAT+TGG | + | chr1_2:36229382-36229401 | Msa0068920:intron | 25.0% |
! | TCTTGAATGTTAGAGTTATT+GGG | + | chr1_2:36229383-36229402 | Msa0068920:intron | 25.0% |
! | CTGCTTAAAATGTTAACTTA+AGG | - | chr1_2:36229576-36229595 | None:intergenic | 25.0% |
!! | TTAACATTTTAAGCAGAACA+TGG | + | chr1_2:36229580-36229599 | Msa0068920:intron | 25.0% |
!! | TAACATTTTAAGCAGAACAT+GGG | + | chr1_2:36229581-36229600 | Msa0068920:intron | 25.0% |
!!! | GCTAATGATGTTTTGTTTTT+GGG | + | chr1_2:36229702-36229721 | Msa0068920:intron | 25.0% |
!!! | CTAATGATGTTTTGTTTTTG+GGG | + | chr1_2:36229703-36229722 | Msa0068920:intron | 25.0% |
!!! | TAATGATGTTTTGTTTTTGG+GGG | + | chr1_2:36229704-36229723 | Msa0068920:intron | 25.0% |
! | TAACTGCGATATAAACTAAT+AGG | + | chr1_2:36229777-36229796 | Msa0068920:intron | 25.0% |
!! | CTTAGATGATAGTTTTTGAA+AGG | + | chr1_2:36229954-36229973 | Msa0068920:intron | 25.0% |
! | CATGTTAAAAGAACTAAAAG+TGG | - | chr1_2:36230089-36230108 | None:intergenic | 25.0% |
! | TTCTAATGGCATTTCAAAAA+GGG | - | chr1_2:36230144-36230163 | None:intergenic | 25.0% |
! | TTTCTAATGGCATTTCAAAA+AGG | - | chr1_2:36230145-36230164 | None:intergenic | 25.0% |
! | TTCTCATCTCTAATTTCTAA+TGG | - | chr1_2:36230158-36230177 | None:intergenic | 25.0% |
!! | TGTGTATTTAATATTTTGCC+AGG | + | chr1_2:36230201-36230220 | Msa0068920:intron | 25.0% |
! | TGTATCTGTGTATTATACTA+TGG | + | chr1_2:36230576-36230595 | Msa0068920:intron | 25.0% |
! | AAACATTTGCAAGATTGTTT+AGG | - | chr1_2:36230810-36230829 | None:intergenic | 25.0% |
! | TCAAATAAGCTAATCCAAAT+AGG | + | chr1_2:36230846-36230865 | Msa0068920:intron | 25.0% |
! | ATTAACATGTTGTGGTAAAA+GGG | - | chr1_2:36231090-36231109 | None:intergenic | 25.0% |
! | TATTAACATGTTGTGGTAAA+AGG | - | chr1_2:36231091-36231110 | None:intergenic | 25.0% |
! | CTAGAATAAAGTAAGGAAAA+AGG | - | chr1_2:36231119-36231138 | None:intergenic | 25.0% |
!! | CTTTTTCCTTACTTTATTCT+AGG | + | chr1_2:36231117-36231136 | Msa0068920:intron | 25.0% |
! | TGATTTCCTAGAATAAAGTA+AGG | - | chr1_2:36231126-36231145 | None:intergenic | 25.0% |
! | CGTAAGAAATAATAAACGAA+AGG | - | chr1_2:36231371-36231390 | None:intergenic | 25.0% |
!!! | TTTGGTTTGACAAAAAAGAA+TGG | - | chr1_2:36231503-36231522 | None:intergenic | 25.0% |
! | AAACTGATATCTTATTGTAG+TGG | - | chr1_2:36231703-36231722 | None:intergenic | 25.0% |
!!! | GATTAATTTTTTTGACCAAC+TGG | + | chr1_2:36232199-36232218 | Msa0068920:intron | 25.0% |
!! | TAGTCCAATTAATGATTTTG+GGG | + | chr1_2:36232279-36232298 | Msa0068920:intron | 25.0% |
! | TCTTTATGGGATAAAATTGA+GGG | - | chr1_2:36232472-36232491 | None:intergenic | 25.0% |
! | ATCTTTATGGGATAAAATTG+AGG | - | chr1_2:36232473-36232492 | None:intergenic | 25.0% |
! | ATGAGATATGCAAAAAACAA+AGG | - | chr1_2:36232859-36232878 | None:intergenic | 25.0% |
!!! | TTTGTTTTTTGCATATCTCA+TGG | + | chr1_2:36232858-36232877 | Msa0068920:intron | 25.0% |
!!! | TTGTTTTTTGCATATCTCAT+GGG | + | chr1_2:36232859-36232878 | Msa0068920:intron | 25.0% |
! | CATACAAGAAGAAATACTAT+TGG | - | chr1_2:36232923-36232942 | None:intergenic | 25.0% |
! | TTAAATAAATCAAGAGACAC+AGG | + | chr1_2:36232952-36232971 | Msa0068920:intron | 25.0% |
! | CTCTTTACTCTTATATTTGT+TGG | + | chr1_2:36232986-36233005 | Msa0068920:intron | 25.0% |
! | CAAAACAATGACTTATTTGA+GGG | + | chr1_2:36233053-36233072 | Msa0068920:intron | 25.0% |
!! | TTCTTCGTAGTTTAAAATGA+CGG | + | chr1_2:36233230-36233249 | Msa0068920:intron | 25.0% |
!! | AGAGGATTTTCTTATGAAAT+TGG | + | chr1_2:36233264-36233283 | Msa0068920:intron | 25.0% |
! | TTATGAAATTGGATGTTCAA+AGG | + | chr1_2:36233275-36233294 | Msa0068920:intron | 25.0% |
! | TATGAAATTGGATGTTCAAA+GGG | + | chr1_2:36233276-36233295 | Msa0068920:intron | 25.0% |
!!! | AATTTTAGGAATCAGATGTA+AGG | + | chr1_2:36233525-36233544 | Msa0068920:intron | 25.0% |
! | AAATGAGATGTAGATGTAAA+TGG | + | chr1_2:36233548-36233567 | Msa0068920:intron | 25.0% |
!! | ATATTAGTCTATTAATGAGG+AGG | + | chr1_2:36233582-36233601 | Msa0068920:intron | 25.0% |
!!! | TTGTTGAATAAAAGGTGTTT+AGG | + | chr1_2:36233695-36233714 | Msa0068920:intron | 25.0% |
!! | TTTTCCTAAATCTAATAGCA+AGG | + | chr1_2:36233836-36233855 | Msa0068920:intron | 25.0% |
! | TAGAATGACTGAAATAAAGA+TGG | + | chr1_2:36233882-36233901 | Msa0068920:intron | 25.0% |
!!! | ATAAAGATGGCTATTTTAGT+AGG | + | chr1_2:36233895-36233914 | Msa0068920:intron | 25.0% |
!! | TTTAGTAGGATAGGATTTTT+AGG | + | chr1_2:36233909-36233928 | Msa0068920:intron | 25.0% |
!! | ATCAAATGTAGTCAAGATTT+TGG | + | chr1_2:36234076-36234095 | Msa0068920:intron | 25.0% |
!! | TCAAATGTAGTCAAGATTTT+GGG | + | chr1_2:36234077-36234096 | Msa0068920:intron | 25.0% |
! | CAATTGTGTAAATAAATCGA+GGG | - | chr1_2:36234236-36234255 | None:intergenic | 25.0% |
! | ACAATTGTGTAAATAAATCG+AGG | - | chr1_2:36234237-36234256 | None:intergenic | 25.0% |
!! | AACTAAGAGTATATAGAGTT+CGG | - | chr1_2:36234299-36234318 | None:intergenic | 25.0% |
!! | GAGTGTTAAAAAGTGTATAT+AGG | - | chr1_2:36234333-36234352 | None:intergenic | 25.0% |
! | CACTAAATAAAATTGAAAGG+GGG | + | chr1_2:36234566-36234585 | Msa0068920:intron | 25.0% |
!!! | TAATTTGCAATTTTTGGTGT+TGG | + | chr1_2:36234634-36234653 | Msa0068920:intron | 25.0% |
! | GATCAAATCAAATAAATAGC+AGG | - | chr1_2:36234754-36234773 | None:intergenic | 25.0% |
!!! | TATTTGATTTGATCTTAAGG+TGG | + | chr1_2:36234760-36234779 | Msa0068920:intron | 25.0% |
! | ACAAAGCAGTAAATTTCATT+AGG | - | chr1_2:36234803-36234822 | None:intergenic | 25.0% |
!! | TTTGTAAACTTGGATTTTGA+TGG | + | chr1_2:36234892-36234911 | Msa0068920:intron | 25.0% |
! | TCGCCAAATTATAAGAAATA+TGG | - | chr1_2:36235052-36235071 | None:intergenic | 25.0% |
! | AAATGGCTTTCTATTATGAT+TGG | + | chr1_2:36235106-36235125 | Msa0068920:three_prime_UTR | 25.0% |
!!! | CAAATGCATTGTTTTTTCTT+AGG | + | chr1_2:36235157-36235176 | Msa0068920:three_prime_UTR | 25.0% |
!!! | GAATTATTTTTGTTGACTGG+AGG | + | chr1_2:36228046-36228065 | Msa0068920:five_prime_UTR | 30.0% |
AATAGTTGTTAGCAGTAGAA+AGG | + | chr1_2:36228072-36228091 | Msa0068920:five_prime_UTR | 30.0% | |
ACAAAAATACCCAAAACAAG+AGG | - | chr1_2:36228142-36228161 | None:intergenic | 30.0% | |
CAAAAAGTGAGATATGGATT+TGG | + | chr1_2:36228210-36228229 | Msa0068920:exon | 30.0% | |
GGTTAAAGAGATCTTAATTG+AGG | + | chr1_2:36228686-36228705 | Msa0068920:intron | 30.0% | |
ATGTTATGTATTGTTGGATC+TGG | + | chr1_2:36228854-36228873 | Msa0068920:intron | 30.0% | |
TGTTATGTATTGTTGGATCT+GGG | + | chr1_2:36228855-36228874 | Msa0068920:intron | 30.0% | |
TGTGACTTTGAGTAATATTG+CGG | + | chr1_2:36229042-36229061 | Msa0068920:intron | 30.0% | |
AAAGTCACAAAACTACAAAG+TGG | - | chr1_2:36229068-36229087 | None:intergenic | 30.0% | |
AGGTATGTGTTTAATGTACT+TGG | + | chr1_2:36229522-36229541 | Msa0068920:intron | 30.0% | |
AGAACATGGGAAGTTATTAA+AGG | + | chr1_2:36229594-36229613 | Msa0068920:intron | 30.0% | |
CAATACACAATTGACAATGT+TGG | - | chr1_2:36229646-36229665 | None:intergenic | 30.0% | |
!!! | GGCTAATGATGTTTTGTTTT+TGG | + | chr1_2:36229701-36229720 | Msa0068920:intron | 30.0% |
!!! | AATGATGTTTTGTTTTTGGG+GGG | + | chr1_2:36229705-36229724 | Msa0068920:intron | 30.0% |
CAATATTGCAATATTGCACA+TGG | + | chr1_2:36230111-36230130 | Msa0068920:intron | 30.0% | |
! | TTAATATTTTGCCAGGTCTA+TGG | + | chr1_2:36230208-36230227 | Msa0068920:intron | 30.0% |
TGTAAGATAGTCGAAAACAT+CGG | - | chr1_2:36230290-36230309 | None:intergenic | 30.0% | |
ACACTTTCTGCAATTATAGA+TGG | + | chr1_2:36230307-36230326 | Msa0068920:CDS | 30.0% | |
TATTATACTATGGTCCTGTT+TGG | + | chr1_2:36230586-36230605 | Msa0068920:intron | 30.0% | |
ACAATAAGTGCTTGTGTTAT+AGG | - | chr1_2:36230632-36230651 | None:intergenic | 30.0% | |
! | ACTGTTTTCATTAGCTATCT+TGG | + | chr1_2:36230733-36230752 | Msa0068920:intron | 30.0% |
TAGCTATCTTGGAGAATTTA+TGG | + | chr1_2:36230744-36230763 | Msa0068920:intron | 30.0% | |
AGTTATTCCAAATGCACTTA+GGG | - | chr1_2:36230872-36230891 | None:intergenic | 30.0% | |
AAGTTATTCCAAATGCACTT+AGG | - | chr1_2:36230873-36230892 | None:intergenic | 30.0% | |
!! | GGACAGCTTTTGAAAATTAT+GGG | - | chr1_2:36230928-36230947 | None:intergenic | 30.0% |
!! | AGGACAGCTTTTGAAAATTA+TGG | - | chr1_2:36230929-36230948 | None:intergenic | 30.0% |
CGTTATTATACATTGCAAGT+TGG | - | chr1_2:36230988-36231007 | None:intergenic | 30.0% | |
GGAGAAATATTAACATGTTG+TGG | - | chr1_2:36231098-36231117 | None:intergenic | 30.0% | |
! | TTTATTCTAGGAAATCAGAG+AGG | + | chr1_2:36231129-36231148 | Msa0068920:intron | 30.0% |
TTGAAAACATGTGTTCGTTT+AGG | + | chr1_2:36231174-36231193 | Msa0068920:intron | 30.0% | |
TGAAAACATGTGTTCGTTTA+GGG | + | chr1_2:36231175-36231194 | Msa0068920:intron | 30.0% | |
CCTATACAGATCTTAATATC+AGG | - | chr1_2:36231436-36231455 | None:intergenic | 30.0% | |
CCTGATATTAAGATCTGTAT+AGG | + | chr1_2:36231433-36231452 | Msa0068920:intron | 30.0% | |
AGATCTGTATAGGAATAATC+AGG | + | chr1_2:36231443-36231462 | Msa0068920:intron | 30.0% | |
GATCTGTATAGGAATAATCA+GGG | + | chr1_2:36231444-36231463 | Msa0068920:intron | 30.0% | |
!!! | CTTTTTTGTCAAACCAAAAC+AGG | + | chr1_2:36231505-36231524 | Msa0068920:intron | 30.0% |
!! | TTCATTTTGCTGTACTTGTT+TGG | + | chr1_2:36231572-36231591 | Msa0068920:intron | 30.0% |
ATCCTGAAGATATTGAAACA+TGG | + | chr1_2:36231908-36231927 | Msa0068920:CDS | 30.0% | |
TCCTGAAGATATTGAAACAT+GGG | + | chr1_2:36231909-36231928 | Msa0068920:CDS | 30.0% | |
! | ATTGAATTGAGCTTTATGTG+TGG | + | chr1_2:36232011-36232030 | Msa0068920:intron | 30.0% |
! | TTGAATTGAGCTTTATGTGT+GGG | + | chr1_2:36232012-36232031 | Msa0068920:intron | 30.0% |
GATTAAACTGCATGAAAAGA+AGG | - | chr1_2:36232049-36232068 | None:intergenic | 30.0% | |
AAGTACATGTTCCAAGATAA+AGG | + | chr1_2:36232125-36232144 | Msa0068920:CDS | 30.0% | |
! | CTATAGTCTTTTCAAATGAC+CGG | - | chr1_2:36232243-36232262 | None:intergenic | 30.0% |
! | AGTCCAATTAATGATTTTGG+GGG | + | chr1_2:36232280-36232299 | Msa0068920:intron | 30.0% |
! | TTTTATCCCATAAAGATCCA+AGG | + | chr1_2:36232476-36232495 | Msa0068920:intron | 30.0% |
TTTATCCCATAAAGATCCAA+GGG | + | chr1_2:36232477-36232496 | Msa0068920:intron | 30.0% | |
!! | CATCTAAATGGATTAGTCAA+TGG | - | chr1_2:36232559-36232578 | None:intergenic | 30.0% |
! | CATTGACTAATCCATTTAGA+TGG | + | chr1_2:36232557-36232576 | Msa0068920:intron | 30.0% |
GCAAAACAATGACTTATTTG+AGG | + | chr1_2:36233052-36233071 | Msa0068920:intron | 30.0% | |
TCAGATTGTCAGTTACATAT+GGG | + | chr1_2:36233123-36233142 | Msa0068920:intron | 30.0% | |
ACCAATATATATCATGTACC+CGG | + | chr1_2:36233177-36233196 | Msa0068920:intron | 30.0% | |
GGTATTAGGGATGAAAATAA+CGG | + | chr1_2:36233300-36233319 | Msa0068920:intron | 30.0% | |
GTATTAGGGATGAAAATAAC+GGG | + | chr1_2:36233301-36233320 | Msa0068920:intron | 30.0% | |
! | ATGAAAATAACGGGACAATA+TGG | + | chr1_2:36233310-36233329 | Msa0068920:intron | 30.0% |
ATATATCATGATATGTCCTG+AGG | + | chr1_2:36233389-36233408 | Msa0068920:intron | 30.0% | |
! | AGATGCGCTATTGAAATTTT+AGG | + | chr1_2:36233511-36233530 | Msa0068920:intron | 30.0% |
GACCAAAGTTGTTGAATAAA+AGG | + | chr1_2:36233687-36233706 | Msa0068920:intron | 30.0% | |
! | CACCTTTTATTCAACAACTT+TGG | - | chr1_2:36233692-36233711 | None:intergenic | 30.0% |
TTTAGGAAAATCTGATCACT+GGG | - | chr1_2:36233826-36233845 | None:intergenic | 30.0% | |
ATTTAGGAAAATCTGATCAC+TGG | - | chr1_2:36233827-36233846 | None:intergenic | 30.0% | |
!! | AGATCCTTGCTATTAGATTT+AGG | - | chr1_2:36233843-36233862 | None:intergenic | 30.0% |
TCTAATAGCAAGGATCTATT+TGG | + | chr1_2:36233846-36233865 | Msa0068920:intron | 30.0% | |
GGATAGATCGAAGATTAAAT+AGG | + | chr1_2:36234015-36234034 | Msa0068920:intron | 30.0% | |
! | CAAATGTAGTCAAGATTTTG+GGG | + | chr1_2:36234078-36234097 | Msa0068920:intron | 30.0% |
TGTGAAAATGCGTGAAAAAT+TGG | + | chr1_2:36234139-36234158 | Msa0068920:intron | 30.0% | |
TTTACTCAATAAGAGAGTGA+AGG | + | chr1_2:36234432-36234451 | Msa0068920:intron | 30.0% | |
TTGTAGTGAAGGATCTAAAT+AGG | - | chr1_2:36234498-36234517 | None:intergenic | 30.0% | |
TTGTGTGTTGAAACATTTGT+CGG | + | chr1_2:36234834-36234853 | Msa0068920:intron | 30.0% | |
ACATGTGATCTTTGTAAACT+TGG | + | chr1_2:36234882-36234901 | Msa0068920:intron | 30.0% | |
! | CTTATATGTTCCTAGCATTT+TGG | + | chr1_2:36234926-36234945 | Msa0068920:intron | 30.0% |
TGTTACAAGAAAACATCCAA+GGG | - | chr1_2:36234959-36234978 | None:intergenic | 30.0% | |
! | TAAGTTTTTCACTGAAACAG+AGG | + | chr1_2:36234991-36235010 | Msa0068920:CDS | 30.0% |
CTAGAATGTTCAATATTTGG+TGG | - | chr1_2:36235217-36235236 | None:intergenic | 30.0% | |
!!! | TTTTGTCATTTTTCATCGTG+AGG | - | chr1_2:36235288-36235307 | None:intergenic | 30.0% |
!! | ATTATCGTTAGGGCTTTGTT+TGG | + | chr1_2:36228527-36228546 | Msa0068920:intron | 35.0% |
AATAGTCCAGTAACTGTTTG+TGG | + | chr1_2:36228729-36228748 | Msa0068920:CDS | 35.0% | |
! | CTAATGAAACTTTTCCAGAC+CGG | + | chr1_2:36228777-36228796 | Msa0068920:CDS | 35.0% |
!! | AGCTTTAAGAAGCAAAAGGA+TGG | - | chr1_2:36228981-36229000 | None:intergenic | 35.0% |
! | TCCTTTTGCTTCTTAAAGCT+AGG | + | chr1_2:36228981-36229000 | Msa0068920:CDS | 35.0% |
!! | ACCTAGCTTTAAGAAGCAAA+AGG | - | chr1_2:36228985-36229004 | None:intergenic | 35.0% |
TCTAATTTATTGGTCGTGCT+TGG | + | chr1_2:36229087-36229106 | Msa0068920:intron | 35.0% | |
TTGTATATGTGTCTGTGTCT+GGG | - | chr1_2:36229121-36229140 | None:intergenic | 35.0% | |
!! | CTTCTTTGTTGTTGTTGTTG+TGG | + | chr1_2:36229269-36229288 | Msa0068920:intron | 35.0% |
GTAGAAGGGTTATATTAGCA+GGG | - | chr1_2:36229472-36229491 | None:intergenic | 35.0% | |
TGTGTATTGCAAAAAGTAGC+AGG | + | chr1_2:36229657-36229676 | Msa0068920:intron | 35.0% | |
CATCATAAAATCCATAGACC+TGG | - | chr1_2:36230222-36230241 | None:intergenic | 35.0% | |
TAGCATTTCCATACTTTCTC+TGG | - | chr1_2:36230249-36230268 | None:intergenic | 35.0% | |
AGTATGGAAATGCTAATGCT+TGG | + | chr1_2:36230254-36230273 | Msa0068920:CDS | 35.0% | |
CGTAACTCTCTTATATGCTA+TGG | + | chr1_2:36230446-36230465 | Msa0068920:intron | 35.0% | |
! | TTATACATTGCAAGTTGGCA+TGG | - | chr1_2:36230983-36231002 | None:intergenic | 35.0% |
GGTTTACATACACAATGTCA+AGG | - | chr1_2:36231061-36231080 | None:intergenic | 35.0% | |
! | CACATGTTTTCAAACCAAAC+AGG | - | chr1_2:36231167-36231186 | None:intergenic | 35.0% |
AACGAAAGGGAAATGTTAAC+CGG | - | chr1_2:36231357-36231376 | None:intergenic | 35.0% | |
GTACAGCAAAATGAAACTGA+AGG | - | chr1_2:36231567-36231586 | None:intergenic | 35.0% | |
CTCCACATAAGATCACAAAA+TGG | - | chr1_2:36231886-36231905 | None:intergenic | 35.0% | |
! | TTACATCTGAGGTAATGTCA+TGG | + | chr1_2:36231974-36231993 | Msa0068920:intron | 35.0% |
TTCAGATGCTTACAGTTACA+AGG | - | chr1_2:36232151-36232170 | None:intergenic | 35.0% | |
! | GTCCAATTAATGATTTTGGG+GGG | + | chr1_2:36232281-36232300 | Msa0068920:intron | 35.0% |
!! | TCCAATTAATGATTTTGGGG+GGG | + | chr1_2:36232282-36232301 | Msa0068920:intron | 35.0% |
! | GCTTCTCTTTCTGAGTATTT+TGG | + | chr1_2:36232425-36232444 | Msa0068920:intron | 35.0% |
ATTCACCCTTGGATCTTTAT+GGG | - | chr1_2:36232485-36232504 | None:intergenic | 35.0% | |
TATTCACCCTTGGATCTTTA+TGG | - | chr1_2:36232486-36232505 | None:intergenic | 35.0% | |
GATTTGTCTGTAAATTGAGC+TGG | - | chr1_2:36232517-36232536 | None:intergenic | 35.0% | |
TACAGACAAATCACTTGAGA+AGG | + | chr1_2:36232525-36232544 | Msa0068920:intron | 35.0% | |
ACAGACAAATCACTTGAGAA+GGG | + | chr1_2:36232526-36232545 | Msa0068920:intron | 35.0% | |
CCACAACGGTAACAATAATT+AGG | - | chr1_2:36232711-36232730 | None:intergenic | 35.0% | |
CCTAATTATTGTTACCGTTG+TGG | + | chr1_2:36232708-36232727 | Msa0068920:CDS | 35.0% | |
TAGAAGCTACATTTCCACAA+CGG | - | chr1_2:36232725-36232744 | None:intergenic | 35.0% | |
GTCTTGATTGTTGCATCATT+TGG | + | chr1_2:36232815-36232834 | Msa0068920:intron | 35.0% | |
AATAAATCAAGAGACACAGG+AGG | + | chr1_2:36232955-36232974 | Msa0068920:intron | 35.0% | |
ATAAATCAAGAGACACAGGA+GGG | + | chr1_2:36232956-36232975 | Msa0068920:intron | 35.0% | |
TGACTTATTTGAGGGATAGT+TGG | + | chr1_2:36233061-36233080 | Msa0068920:intron | 35.0% | |
GTCAGATTGTCAGTTACATA+TGG | + | chr1_2:36233122-36233141 | Msa0068920:intron | 35.0% | |
CAGATTGTCAGTTACATATG+GGG | + | chr1_2:36233124-36233143 | Msa0068920:intron | 35.0% | |
ACCGGGTACATGATATATAT+TGG | - | chr1_2:36233181-36233200 | None:intergenic | 35.0% | |
AATATATATCATGTACCCGG+TGG | + | chr1_2:36233180-36233199 | Msa0068920:intron | 35.0% | |
! | ATGACGGCTTTAATGTTAAG+AGG | + | chr1_2:36233246-36233265 | Msa0068920:intron | 35.0% |
!! | ATGTTCAAAGGGAGGTATTA+GGG | + | chr1_2:36233287-36233306 | Msa0068920:intron | 35.0% |
!!! | GATGGCTATTTTAGTAGGAT+AGG | + | chr1_2:36233900-36233919 | Msa0068920:intron | 35.0% |
!! | AGGATTTTTAGGCAACTGAA+TGG | + | chr1_2:36233920-36233939 | Msa0068920:intron | 35.0% |
GGTAAAACACCAATAAGCTT+AGG | + | chr1_2:36233941-36233960 | Msa0068920:intron | 35.0% | |
! | TTTCACGCATTTTCACACAT+CGG | - | chr1_2:36234136-36234155 | None:intergenic | 35.0% |
ATAAATCGAGGGTCAGTATA+TGG | - | chr1_2:36234225-36234244 | None:intergenic | 35.0% | |
TTTAACACTCACTCTCCTAT+TGG | + | chr1_2:36234343-36234362 | Msa0068920:intron | 35.0% | |
CTATTGGATGGAATTCATGT+GGG | + | chr1_2:36234359-36234378 | Msa0068920:intron | 35.0% | |
! | TTTATGTAGGTACCGTACTT+TGG | - | chr1_2:36234411-36234430 | None:intergenic | 35.0% |
AATAGGTTAGAGGAGTGATA+TGG | - | chr1_2:36234481-36234500 | None:intergenic | 35.0% | |
GAAGGATCTAAATAGGTTAG+AGG | - | chr1_2:36234491-36234510 | None:intergenic | 35.0% | |
ATAGATATCGCTTGTAGTGA+AGG | - | chr1_2:36234509-36234528 | None:intergenic | 35.0% | |
TAAGGTGGTAAATGTAGTGT+TGG | + | chr1_2:36234775-36234794 | Msa0068920:intron | 35.0% | |
AAGGTGGTAAATGTAGTGTT+GGG | + | chr1_2:36234776-36234795 | Msa0068920:intron | 35.0% | |
AATGCTAGGAACATATAAGC+AGG | - | chr1_2:36234925-36234944 | None:intergenic | 35.0% | |
CTGTTACAAGAAAACATCCA+AGG | - | chr1_2:36234960-36234979 | None:intergenic | 35.0% | |
! | CTTGGATGTTTTCTTGTAAC+AGG | + | chr1_2:36234958-36234977 | Msa0068920:intron | 35.0% |
ACAGTGTTAGTCATGTATTG+TGG | + | chr1_2:36235129-36235148 | Msa0068920:three_prime_UTR | 35.0% | |
ATACCCAAAACAAGAGGAGA+AGG | - | chr1_2:36228136-36228155 | None:intergenic | 40.0% | |
GAGATATGGATTTGGACCAA+TGG | + | chr1_2:36228218-36228237 | Msa0068920:exon | 40.0% | |
CTTTAACCTTCGAGATCCAT+TGG | - | chr1_2:36228237-36228256 | None:intergenic | 40.0% | |
TGGATCTCGAAGGTTAAAGA+TGG | + | chr1_2:36228238-36228257 | Msa0068920:CDS | 40.0% | |
ACAGTTACTGGACTATTCAC+AGG | - | chr1_2:36228726-36228745 | None:intergenic | 40.0% | |
ATGTCACCACAAACAGTTAC+TGG | - | chr1_2:36228738-36228757 | None:intergenic | 40.0% | |
ACTGTTTGTGGTGACATTCA+TGG | + | chr1_2:36228741-36228760 | Msa0068920:CDS | 40.0% | |
GTTGTATATGTGTCTGTGTC+TGG | - | chr1_2:36229122-36229141 | None:intergenic | 40.0% | |
! | CAAACCTTTTCCCACTAAGT+GGG | - | chr1_2:36229249-36229268 | None:intergenic | 40.0% |
GTGTCTGACACTGATACTAT+TGG | - | chr1_2:36229306-36229325 | None:intergenic | 40.0% | |
AAACACCTACGTAGCATTGT+CGG | - | chr1_2:36229360-36229379 | None:intergenic | 40.0% | |
CGTAGAAGGGTTATATTAGC+AGG | - | chr1_2:36229473-36229492 | None:intergenic | 40.0% | |
GCTAATATAACCCTTCTACG+TGG | + | chr1_2:36229473-36229492 | Msa0068920:CDS | 40.0% | |
TTCATGGTTTCCACGTAGAA+GGG | - | chr1_2:36229486-36229505 | None:intergenic | 40.0% | |
TTTCATGGTTTCCACGTAGA+AGG | - | chr1_2:36229487-36229506 | None:intergenic | 40.0% | |
GTGTGAGTTGTCTACTTTCA+TGG | - | chr1_2:36229502-36229521 | None:intergenic | 40.0% | |
TGAAAGTAGACAACTCACAC+AGG | + | chr1_2:36229502-36229521 | Msa0068920:CDS | 40.0% | |
AAGTAGCAGGTTCAAATTCC+CGG | + | chr1_2:36229670-36229689 | Msa0068920:intron | 40.0% | |
! | TCTATAGGCCTTTTGTGATC+AGG | + | chr1_2:36229732-36229751 | Msa0068920:intron | 40.0% |
GATGAATGCCAGAGAAAGTA+TGG | + | chr1_2:36230238-36230257 | Msa0068920:CDS | 40.0% | |
CACTGCTTAAATGTGAGTAG+GGG | - | chr1_2:36230386-36230405 | None:intergenic | 40.0% | |
GCACTGCTTAAATGTGAGTA+GGG | - | chr1_2:36230387-36230406 | None:intergenic | 40.0% | |
TGCACTGCTTAAATGTGAGT+AGG | - | chr1_2:36230388-36230407 | None:intergenic | 40.0% | |
TTGTTCTGATGTCTGGAGAA+AGG | - | chr1_2:36230501-36230520 | None:intergenic | 40.0% | |
TGGTCAATTGTTCTGATGTC+TGG | - | chr1_2:36230508-36230527 | None:intergenic | 40.0% | |
AGACATCAGAACAATTGACC+AGG | + | chr1_2:36230507-36230526 | Msa0068920:CDS | 40.0% | |
AAATGCACTTAGGGCCTATT+TGG | - | chr1_2:36230863-36230882 | None:intergenic | 40.0% | |
AAATAGGCCCTAAGTGCATT+TGG | + | chr1_2:36230862-36230881 | Msa0068920:intron | 40.0% | |
AACATGTTGTGGTAAAAGGG+TGG | - | chr1_2:36231087-36231106 | None:intergenic | 40.0% | |
!! | AATCAGAGAGGTATCAGCAA+TGG | + | chr1_2:36231141-36231160 | Msa0068920:intron | 40.0% |
! | GAACACATTACAGCCTGTTT+TGG | - | chr1_2:36231521-36231540 | None:intergenic | 40.0% |
GACAGATAAGAGTCATTGAG+CGG | + | chr1_2:36231836-36231855 | Msa0068920:intron | 40.0% | |
AACTGTGAAATTCCTCACGA+GGG | + | chr1_2:36231859-36231878 | Msa0068920:CDS | 40.0% | |
!! | GGCCATTTTGTGATCTTATG+TGG | + | chr1_2:36231881-36231900 | Msa0068920:CDS | 40.0% |
GCCCATGTTTCAATATCTTC+AGG | - | chr1_2:36231913-36231932 | None:intergenic | 40.0% | |
ACATTACCTCAGATGTAACC+CGG | - | chr1_2:36231972-36231991 | None:intergenic | 40.0% | |
GCACATCAACTTGTACAAGA+AGG | + | chr1_2:36232098-36232117 | Msa0068920:CDS | 40.0% | |
CAGTTACAAGGCCTTTATCT+TGG | - | chr1_2:36232139-36232158 | None:intergenic | 40.0% | |
!!! | TTTGACCAACTGGTCTTTTG+AGG | + | chr1_2:36232209-36232228 | Msa0068920:intron | 40.0% |
!! | CCAATTAATGATTTTGGGGG+GGG | + | chr1_2:36232283-36232302 | Msa0068920:intron | 40.0% |
!! | CAATTAATGATTTTGGGGGG+GGG | + | chr1_2:36232284-36232303 | Msa0068920:intron | 40.0% |
!! | AATTAATGATTTTGGGGGGG+GGG | + | chr1_2:36232285-36232304 | Msa0068920:intron | 40.0% |
GCTTACTTGAAACACTTCAG+GGG | - | chr1_2:36232327-36232346 | None:intergenic | 40.0% | |
CGCTTACTTGAAACACTTCA+GGG | - | chr1_2:36232328-36232347 | None:intergenic | 40.0% | |
TCGCTTACTTGAAACACTTC+AGG | - | chr1_2:36232329-36232348 | None:intergenic | 40.0% | |
TCTGTAAATTGAGCTGGTGT+GGG | - | chr1_2:36232511-36232530 | None:intergenic | 40.0% | |
ACATGGTGAGACCATCTAAA+TGG | - | chr1_2:36232571-36232590 | None:intergenic | 40.0% | |
ATTTAGATGGTCTCACCATG+TGG | + | chr1_2:36232570-36232589 | Msa0068920:intron | 40.0% | |
TTTAGATGGTCTCACCATGT+GGG | + | chr1_2:36232571-36232590 | Msa0068920:intron | 40.0% | |
ACCATGTGGGATAACTTTCT+TGG | + | chr1_2:36232584-36232603 | Msa0068920:intron | 40.0% | |
ACCAAGAAAGTTATCCCACA+TGG | - | chr1_2:36232588-36232607 | None:intergenic | 40.0% | |
! | TGTTGCATCATTTGGCTTCA+TGG | + | chr1_2:36232823-36232842 | Msa0068920:intron | 40.0% |
GAAATTGGATGTTCAAAGGG+AGG | + | chr1_2:36233279-36233298 | Msa0068920:intron | 40.0% | |
!! | GATGTTCAAAGGGAGGTATT+AGG | + | chr1_2:36233286-36233305 | Msa0068920:intron | 40.0% |
! | TGTTCACAGTTTAAAGCCTC+AGG | - | chr1_2:36233408-36233427 | None:intergenic | 40.0% |
CATAAATGACATGCTCTGAC+TGG | + | chr1_2:36233739-36233758 | Msa0068920:intron | 40.0% | |
CATAGTTGAAAACCTTCCCA+TGG | - | chr1_2:36233792-36233811 | None:intergenic | 40.0% | |
! | AGGTTTTCAACTATGAGCTC+AGG | + | chr1_2:36233797-36233816 | Msa0068920:intron | 40.0% |
ATAGCAAGGATCTATTTGGC+AGG | + | chr1_2:36233850-36233869 | Msa0068920:intron | 40.0% | |
TCTCTGTTGCCTAAGCTTAT+TGG | - | chr1_2:36233953-36233972 | None:intergenic | 40.0% | |
GCATCTGTGGACAATTTATG+AGG | + | chr1_2:36233983-36234002 | Msa0068920:intron | 40.0% | |
TGCTGCAGAACTTAAACCAA+AGG | + | chr1_2:36234104-36234123 | Msa0068920:intron | 40.0% | |
! | TTCACGCATTTTCACACATC+GGG | - | chr1_2:36234135-36234154 | None:intergenic | 40.0% |
CCACATGAATTCCATCCAAT+AGG | - | chr1_2:36234361-36234380 | None:intergenic | 40.0% | |
CCTATTGGATGGAATTCATG+TGG | + | chr1_2:36234358-36234377 | Msa0068920:intron | 40.0% | |
! | AGGTACCGTACTTTGGAAAT+GGG | - | chr1_2:36234404-36234423 | None:intergenic | 40.0% |
! | TAGGTACCGTACTTTGGAAA+TGG | - | chr1_2:36234405-36234424 | None:intergenic | 40.0% |
!!! | TTTTGGTGTTGGCGATAGTT+AGG | + | chr1_2:36234645-36234664 | Msa0068920:intron | 40.0% |
CAGCATAATTGTCGCCTTAA+CGG | - | chr1_2:36234687-36234706 | None:intergenic | 40.0% | |
AGGTGGTAAATGTAGTGTTG+GGG | + | chr1_2:36234777-36234796 | Msa0068920:intron | 40.0% | |
!! | TGAAACATTTGTCGGTGTCA+TGG | + | chr1_2:36234842-36234861 | Msa0068920:intron | 40.0% |
AGGAGAACAATCAGATGAGA+GGG | + | chr1_2:36235011-36235030 | Msa0068920:CDS | 40.0% | |
AAATATGGAACACCTGTCCT+AGG | - | chr1_2:36235037-36235056 | None:intergenic | 40.0% | |
!! | TCCTCCTTCTCCTCTTGTTT+TGG | + | chr1_2:36228129-36228148 | Msa0068920:five_prime_UTR | 45.0% |
!!! | CCTCCTTCTCCTCTTGTTTT+GGG | + | chr1_2:36228130-36228149 | Msa0068920:five_prime_UTR | 45.0% |
TCTCTTCTCTTCTCTTCCCT+CGG | - | chr1_2:36228174-36228193 | None:intergenic | 45.0% | |
TTTGGACCAATGGATCTCGA+AGG | + | chr1_2:36228228-36228247 | Msa0068920:CDS | 45.0% | |
GTTCGTCTTCGAGAAGATGT+TGG | - | chr1_2:36228264-36228283 | None:intergenic | 45.0% | |
! | ATGAAACTTTTCCAGACCGG+TGG | + | chr1_2:36228780-36228799 | Msa0068920:CDS | 45.0% |
! | TGAAACTTTTCCAGACCGGT+GGG | + | chr1_2:36228781-36228800 | Msa0068920:CDS | 45.0% |
TAGGGTGACTTTGTTGATCG+CGG | + | chr1_2:36228932-36228951 | Msa0068920:intron | 45.0% | |
!!! | ACGGCATATTTTGATCCACG+TGG | + | chr1_2:36229218-36229237 | Msa0068920:intron | 45.0% |
! | CTTTTCCCACTAAGTGGGAT+TGG | - | chr1_2:36229244-36229263 | None:intergenic | 45.0% |
CAATCCCACTTAGTGGGAAA+AGG | + | chr1_2:36229242-36229261 | Msa0068920:intron | 45.0% | |
! | GCAAACCTTTTCCCACTAAG+TGG | - | chr1_2:36229250-36229269 | None:intergenic | 45.0% |
!! | GCATTGTCGGTTCACAATGA+AGG | - | chr1_2:36229347-36229366 | None:intergenic | 45.0% |
TTCAAATTCCCGGTCATAGC+AGG | + | chr1_2:36229680-36229699 | Msa0068920:intron | 45.0% | |
! | ATCATTAGCCTGCTATGACC+GGG | - | chr1_2:36229691-36229710 | None:intergenic | 45.0% |
! | CATCATTAGCCTGCTATGAC+CGG | - | chr1_2:36229692-36229711 | None:intergenic | 45.0% |
!! | TTTTTGGGGGGCACATCTAT+AGG | + | chr1_2:36229717-36229736 | Msa0068920:intron | 45.0% |
CCACAGAACCTGATCACAAA+AGG | - | chr1_2:36229743-36229762 | None:intergenic | 45.0% | |
! | CCTTTTGTGATCAGGTTCTG+TGG | + | chr1_2:36229740-36229759 | Msa0068920:intron | 45.0% |
TTGTGATCAGGTTCTGTGGA+AGG | + | chr1_2:36229744-36229763 | Msa0068920:intron | 45.0% | |
TGTGATCAGGTTCTGTGGAA+GGG | + | chr1_2:36229745-36229764 | Msa0068920:intron | 45.0% | |
ATAGAGAGAGGAAAGAGGGA+AGG | - | chr1_2:36230363-36230382 | None:intergenic | 45.0% | |
TTATATGCTATGGTCGACCC+AGG | + | chr1_2:36230456-36230475 | Msa0068920:intron | 45.0% | |
AAGTTGGCATGGCACACATT+TGG | - | chr1_2:36230972-36230991 | None:intergenic | 45.0% | |
GAACTGTGAAATTCCTCACG+AGG | + | chr1_2:36231858-36231877 | Msa0068920:CDS | 45.0% | |
ACTGTGAAATTCCTCACGAG+GGG | + | chr1_2:36231860-36231879 | Msa0068920:CDS | 45.0% | |
CATTACCTCAGATGTAACCC+GGG | - | chr1_2:36231971-36231990 | None:intergenic | 45.0% | |
GTTGATGTGCTCGACAAACA+AGG | - | chr1_2:36232088-36232107 | None:intergenic | 45.0% | |
AACCACCTCAAAAGACCAGT+TGG | - | chr1_2:36232217-36232236 | None:intergenic | 45.0% | |
CCCCCCCCAAAATCATTAAT+TGG | - | chr1_2:36232286-36232305 | None:intergenic | 45.0% | |
!! | ATTAATGATTTTGGGGGGGG+GGG | + | chr1_2:36232286-36232305 | Msa0068920:intron | 45.0% |
!! | AGCTTGAGCTTGCTGTTTGA+GGG | + | chr1_2:36232348-36232367 | Msa0068920:intron | 45.0% |
!!! | GGACTCGGTTATTTTCAGGT+GGG | + | chr1_2:36232370-36232389 | Msa0068920:intron | 45.0% |
!!! | GACTCGGTTATTTTCAGGTG+GGG | + | chr1_2:36232371-36232390 | Msa0068920:intron | 45.0% |
!!! | ACTCGGTTATTTTCAGGTGG+GGG | + | chr1_2:36232372-36232391 | Msa0068920:intron | 45.0% |
!!! | GTATTTTGGAGTAGCTGTCG+TGG | + | chr1_2:36232439-36232458 | Msa0068920:intron | 45.0% |
GTCTGTAAATTGAGCTGGTG+TGG | - | chr1_2:36232512-36232531 | None:intergenic | 45.0% | |
GTTGGCGTGTTCATTACAGT+TGG | + | chr1_2:36233079-36233098 | Msa0068920:intron | 45.0% | |
AACAAGCATCAGCAGCTTCA+GGG | - | chr1_2:36233349-36233368 | None:intergenic | 45.0% | |
TAACAAGCATCAGCAGCTTC+AGG | - | chr1_2:36233350-36233369 | None:intergenic | 45.0% | |
TGACTGGAAAGTGGTACGAT+TGG | + | chr1_2:36233755-36233774 | Msa0068920:intron | 45.0% | |
TGGAAAGTGGTACGATTGGT+CGG | + | chr1_2:36233759-36233778 | Msa0068920:intron | 45.0% | |
TGGACAATTTATGAGGCAGC+TGG | + | chr1_2:36233990-36234009 | Msa0068920:intron | 45.0% | |
CACAGTTACTCAAGTCTCGT+AGG | - | chr1_2:36234199-36234218 | None:intergenic | 45.0% | |
ACACTCACTCTCCTATTGGA+TGG | + | chr1_2:36234347-36234366 | Msa0068920:intron | 45.0% | |
TGGGACCCATTTCCAAAGTA+CGG | + | chr1_2:36234396-36234415 | Msa0068920:intron | 45.0% | |
GCGATATCTATCCTTGTCTC+TGG | + | chr1_2:36234518-36234537 | Msa0068920:intron | 45.0% | |
TTGGATATGGACCAGAGACA+AGG | - | chr1_2:36234532-36234551 | None:intergenic | 45.0% | |
TGTTGGCGATAGTTAGGCTA+TGG | + | chr1_2:36234651-36234670 | Msa0068920:intron | 45.0% | |
! | ATGGTTGGTACATGCCGTTA+AGG | + | chr1_2:36234670-36234689 | Msa0068920:intron | 45.0% |
GGGTCAGTAACCAAAATGCT+AGG | - | chr1_2:36234939-36234958 | None:intergenic | 45.0% | |
!!! | GCATTTTGGTTACTGACCCT+TGG | + | chr1_2:36234940-36234959 | Msa0068920:intron | 45.0% |
GAGGAGAACAATCAGATGAG+AGG | + | chr1_2:36235010-36235029 | Msa0068920:CDS | 45.0% | |
!! | TAAAAAAATCATTAAATAAA+AGG | - | chr1_2:36229426-36229445 | None:intergenic | 5.0% |
!!! | TTTATTTGTTAAAATAAATT+GGG | + | chr1_2:36229802-36229821 | Msa0068920:intron | 5.0% |
!!! | ATTTTATTGATTTTTTAATA+TGG | - | chr1_2:36233464-36233483 | None:intergenic | 5.0% |
!! | GATTTAAAAATAAAAATATA+TGG | - | chr1_2:36234724-36234743 | None:intergenic | 5.0% |
CCCAAAACAAGAGGAGAAGG+AGG | - | chr1_2:36228133-36228152 | None:intergenic | 50.0% | |
! | ATTTTTGTTCGACAGCGCCG+AGG | + | chr1_2:36228154-36228173 | Msa0068920:five_prime_UTR | 50.0% |
!! | TTTTTGTTCGACAGCGCCGA+GGG | + | chr1_2:36228155-36228174 | Msa0068920:five_prime_UTR | 50.0% |
AGAGAGAGAGAGAGAGAGAG+GGG | - | chr1_2:36228095-36228114 | None:intergenic | 50.0% | |
GAGAGAGAGAGAGAGAGAGA+GGG | - | chr1_2:36228094-36228113 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAGAGAGAG+AGG | - | chr1_2:36228095-36228114 | None:intergenic | 50.0% | |
GTGAACCGACAATGCTACGT+AGG | + | chr1_2:36229352-36229371 | Msa0068920:intron | 50.0% | |
GGGGATAGAGAGAGGAAAGA+GGG | - | chr1_2:36230367-36230386 | None:intergenic | 50.0% | |
AGGGGATAGAGAGAGGAAAG+AGG | - | chr1_2:36230368-36230387 | None:intergenic | 50.0% | |
TGTGAGTAGGGGATAGAGAG+AGG | - | chr1_2:36230375-36230394 | None:intergenic | 50.0% | |
ACCCAGGTGCTTTGTGTTCA+CGG | + | chr1_2:36230472-36230491 | Msa0068920:intron | 50.0% | |
! | ACCGTGAACACAAAGCACCT+GGG | - | chr1_2:36230476-36230495 | None:intergenic | 50.0% |
GTAGAGTTCGACCAGCAACT+GGG | - | chr1_2:36230548-36230567 | None:intergenic | 50.0% | |
TGTAGAGTTCGACCAGCAAC+TGG | - | chr1_2:36230549-36230568 | None:intergenic | 50.0% | |
GTTGTGGTAAAAGGGTGGAC+AGG | - | chr1_2:36231082-36231101 | None:intergenic | 50.0% | |
GGTATCAGCAATGGCCTGTT+TGG | + | chr1_2:36231150-36231169 | Msa0068920:intron | 50.0% | |
AACATCCTTAACCAGTGCCC+CGG | + | chr1_2:36231326-36231345 | Msa0068920:intron | 50.0% | |
GTGCTCGACAAACAAGGTCA+AGG | - | chr1_2:36232082-36232101 | None:intergenic | 50.0% | |
!!! | GACCAACTGGTCTTTTGAGG+TGG | + | chr1_2:36232212-36232231 | Msa0068920:intron | 50.0% |
!!! | GTCTTTTGAGGTGGTTCGTC+CGG | + | chr1_2:36232221-36232240 | Msa0068920:intron | 50.0% |
!! | TTAATGATTTTGGGGGGGGG+GGG | + | chr1_2:36232287-36232306 | Msa0068920:intron | 50.0% |
!! | GAGCTTGAGCTTGCTGTTTG+AGG | + | chr1_2:36232347-36232366 | Msa0068920:intron | 50.0% |
!! | GCTTGAGCTTGCTGTTTGAG+GGG | + | chr1_2:36232349-36232368 | Msa0068920:intron | 50.0% |
!! | GAGGGGACTCGGTTATTTTC+AGG | + | chr1_2:36232366-36232385 | Msa0068920:intron | 50.0% |
!! | GGGACTCGGTTATTTTCAGG+TGG | + | chr1_2:36232369-36232388 | Msa0068920:intron | 50.0% |
! | GAGCATTGTGGGGCAAAATC+AGG | + | chr1_2:36232394-36232413 | Msa0068920:intron | 50.0% |
!! | GTCTAAACGCTGATTCCACC+GGG | - | chr1_2:36233198-36233217 | None:intergenic | 50.0% |
!! | CGTCTAAACGCTGATTCCAC+CGG | - | chr1_2:36233199-36233218 | None:intergenic | 50.0% |
ACAAGCATCAGCAGCTTCAG+GGG | - | chr1_2:36233348-36233367 | None:intergenic | 50.0% | |
GACATGCTCTGACTGGAAAG+TGG | + | chr1_2:36233746-36233765 | Msa0068920:intron | 50.0% | |
! | AAAGTGGTACGATTGGTCGG+TGG | + | chr1_2:36233762-36233781 | Msa0068920:intron | 50.0% |
AGCTTAGGCAACAGAGAGCT+TGG | + | chr1_2:36233956-36233975 | Msa0068920:intron | 50.0% | |
AGGCAACAGAGAGCTTGGAA+AGG | + | chr1_2:36233961-36233980 | Msa0068920:intron | 50.0% | |
!! | AGAGCTTGGAAAGGCATCTG+TGG | + | chr1_2:36233970-36233989 | Msa0068920:intron | 50.0% |
CAATTTATGAGGCAGCTGGC+AGG | + | chr1_2:36233994-36234013 | Msa0068920:intron | 50.0% | |
! | TGTGGGTGTCACACTTCATG+TGG | + | chr1_2:36234376-36234395 | Msa0068920:intron | 50.0% |
! | GTGGGTGTCACACTTCATGT+GGG | + | chr1_2:36234377-36234396 | Msa0068920:intron | 50.0% |
GGCGATAGTTAGGCTATGGT+TGG | + | chr1_2:36234655-36234674 | Msa0068920:intron | 50.0% | |
ACAATCAGATGAGAGGGCCT+AGG | + | chr1_2:36235017-36235036 | Msa0068920:CDS | 50.0% | |
!! | ACTAAGTGGGATTGGCCACG+TGG | - | chr1_2:36229236-36229255 | None:intergenic | 55.0% |
ACGTGGCCAATCCCACTTAG+TGG | + | chr1_2:36229235-36229254 | Msa0068920:intron | 55.0% | |
CGTGGCCAATCCCACTTAGT+GGG | + | chr1_2:36229236-36229255 | Msa0068920:intron | 55.0% | |
! | CACCGTGAACACAAAGCACC+TGG | - | chr1_2:36230477-36230496 | None:intergenic | 55.0% |
CAGGTGCTTTGTGTTCACGG+TGG | + | chr1_2:36230475-36230494 | Msa0068920:intron | 55.0% | |
GTTCGACCAGCAACTGGGAA+GGG | - | chr1_2:36230543-36230562 | None:intergenic | 55.0% | |
AGTTCGACCAGCAACTGGGA+AGG | - | chr1_2:36230544-36230563 | None:intergenic | 55.0% | |
GTCATGTTAACCAGTGCCCC+CGG | + | chr1_2:36231197-36231216 | Msa0068920:intron | 55.0% | |
TCATGTTAACCAGTGCCCCC+GGG | + | chr1_2:36231198-36231217 | Msa0068920:intron | 55.0% | |
TGCTTCCTTAACCAGTGCCC+CGG | - | chr1_2:36231219-36231238 | None:intergenic | 55.0% | |
ACATCCTTAACCAGTGCCCC+GGG | + | chr1_2:36231327-36231346 | Msa0068920:intron | 55.0% | |
AAATGTTAACCGGTGCCCCC+GGG | - | chr1_2:36231347-36231366 | None:intergenic | 55.0% | |
GAAATGTTAACCGGTGCCCC+CGG | - | chr1_2:36231348-36231367 | None:intergenic | 55.0% | |
TCACAAAATGGCCCCTCGTG+AGG | - | chr1_2:36231874-36231893 | None:intergenic | 55.0% | |
AAAAGCCAACCAGCTCCACG+TGG | - | chr1_2:36231943-36231962 | None:intergenic | 55.0% | |
!!! | CGTGGAGCTGGTTGGCTTTT+CGG | + | chr1_2:36231943-36231962 | Msa0068920:CDS | 55.0% |
!!! | CTGGTTGGCTTTTCGGATCC+CGG | + | chr1_2:36231950-36231969 | Msa0068920:CDS | 55.0% |
!!! | TGGTTGGCTTTTCGGATCCC+GGG | + | chr1_2:36231951-36231970 | Msa0068920:CDS | 55.0% |
!! | TAATGATTTTGGGGGGGGGG+GGG | + | chr1_2:36232288-36232307 | Msa0068920:intron | 55.0% |
!! | GCTTGCTGTTTGAGGGGACT+CGG | + | chr1_2:36232355-36232374 | Msa0068920:intron | 55.0% |
!! | TTTCAGGTGGGGGAGCATTG+TGG | + | chr1_2:36232382-36232401 | Msa0068920:intron | 55.0% |
!! | TTCAGGTGGGGGAGCATTGT+GGG | + | chr1_2:36232383-36232402 | Msa0068920:intron | 55.0% |
GGTGTGGGTGTATTCACCCT+TGG | - | chr1_2:36232496-36232515 | None:intergenic | 55.0% | |
CAAGCATCAGCAGCTTCAGG+GGG | - | chr1_2:36233347-36233366 | None:intergenic | 55.0% | |
ATTGGTCGGTGGCGATCCAT+GGG | + | chr1_2:36233773-36233792 | Msa0068920:intron | 55.0% | |
CACACATCGGGCATGACCTT+TGG | - | chr1_2:36234123-36234142 | None:intergenic | 55.0% | |
GGGAAGGGAGCTAGAGAACC+TGG | - | chr1_2:36230528-36230547 | None:intergenic | 60.0% | |
CTAGCTCCCTTCCCAGTTGC+TGG | + | chr1_2:36230534-36230553 | Msa0068920:intron | 60.0% | |
CATGTTAACCAGTGCCCCCG+GGG | + | chr1_2:36231199-36231218 | Msa0068920:intron | 60.0% | |
TTCCTTAACCAGTGCCCCGG+GGG | - | chr1_2:36231216-36231235 | None:intergenic | 60.0% | |
CTTCCTTAACCAGTGCCCCG+GGG | - | chr1_2:36231217-36231236 | None:intergenic | 60.0% | |
GCTTCCTTAACCAGTGCCCC+GGG | - | chr1_2:36231218-36231237 | None:intergenic | 60.0% | |
CATCCTTAACCAGTGCCCCG+GGG | + | chr1_2:36231328-36231347 | Msa0068920:intron | 60.0% | |
ATCCTTAACCAGTGCCCCGG+GGG | + | chr1_2:36231329-36231348 | Msa0068920:intron | 60.0% | |
AATGTTAACCGGTGCCCCCG+GGG | - | chr1_2:36231346-36231365 | None:intergenic | 60.0% | |
ACATGGGCAGTCAGTCCACG+TGG | + | chr1_2:36231925-36231944 | Msa0068920:CDS | 60.0% | |
TCAGTCCACGTGGAGCTGGT+TGG | + | chr1_2:36231935-36231954 | Msa0068920:CDS | 60.0% | |
CGGATCCCGGGTTACATCTG+AGG | + | chr1_2:36231963-36231982 | Msa0068920:CDS | 60.0% | |
!! | AATGATTTTGGGGGGGGGGG+GGG | + | chr1_2:36232289-36232308 | Msa0068920:intron | 60.0% |
!! | TCAGGTGGGGGAGCATTGTG+GGG | + | chr1_2:36232384-36232403 | Msa0068920:intron | 60.0% |
! | GATTGGTCGGTGGCGATCCA+TGG | + | chr1_2:36233772-36233791 | Msa0068920:intron | 60.0% |
CAGATGAGAGGGCCTAGGAC+AGG | + | chr1_2:36235022-36235041 | Msa0068920:CDS | 60.0% | |
GCAGTCAGTCCACGTGGAGC+TGG | + | chr1_2:36231931-36231950 | Msa0068920:CDS | 65.0% | |
!! | ATGATTTTGGGGGGGGGGGG+GGG | + | chr1_2:36232290-36232309 | Msa0068920:intron | 65.0% |
GTCGGTGGCGATCCATGGGA+AGG | + | chr1_2:36233777-36233796 | Msa0068920:intron | 65.0% | |
AGTCTCGGGCACGTGCCCAC+CGG | - | chr1_2:36228799-36228818 | None:intergenic | 70.0% | |
!! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr1_2:36231211-36231230 | Msa0068920:intron | 70.0% |
!! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr1_2:36231211-36231230 | None:intergenic | 70.0% |
AACCAGTGCCCCCGGGGCAC+TGG | + | chr1_2:36231205-36231224 | Msa0068920:intron | 75.0% | |
! | AACCAGTGCCCCGGGGGCAC+TGG | - | chr1_2:36231335-36231354 | None:intergenic | 75.0% |
! | AACCAGTGCCCCGGGGGCAC+CGG | + | chr1_2:36231335-36231354 | Msa0068920:intron | 75.0% |
!! | ATTTTGGGGGGGGGGGGGGG+TGG | + | chr1_2:36232293-36232312 | Msa0068920:intron | 75.0% |
! | CGGGCACGTGCCCACCGGTC+TGG | - | chr1_2:36228794-36228813 | None:intergenic | 80.0% |
! | AACCGGTGCCCCCGGGGCAC+TGG | - | chr1_2:36231340-36231359 | None:intergenic | 80.0% |
! | GGGGGGGGGGGGGGTGGTAA+AGG | + | chr1_2:36232299-36232318 | Msa0068920:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 36228024 | 36235361 | 36228024 | ID=Msa0068920;Name=Msa0068920 |
chr1_2 | mRNA | 36228024 | 36235361 | 36228024 | ID=Msa0068920-mRNA-1;Parent=Msa0068920;Name=Msa0068920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=199|1|1|1|1|1|10|298|303 |
chr1_2 | exon | 36228024 | 36228303 | 36228024 | ID=Msa0068920-mRNA-1:exon:11553;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36228687 | 36228833 | 36228687 | ID=Msa0068920-mRNA-1:exon:11554;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36228935 | 36229002 | 36228935 | ID=Msa0068920-mRNA-1:exon:11555;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36229466 | 36229523 | 36229466 | ID=Msa0068920-mRNA-1:exon:11556;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36230223 | 36230333 | 36230223 | ID=Msa0068920-mRNA-1:exon:11557;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36230478 | 36230528 | 36230478 | ID=Msa0068920-mRNA-1:exon:11558;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36231841 | 36231984 | 36231841 | ID=Msa0068920-mRNA-1:exon:11559;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36232062 | 36232157 | 36232062 | ID=Msa0068920-mRNA-1:exon:11560;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36232696 | 36232767 | 36232696 | ID=Msa0068920-mRNA-1:exon:11561;Parent=Msa0068920-mRNA-1 |
chr1_2 | exon | 36234980 | 36235361 | 36234980 | ID=Msa0068920-mRNA-1:exon:11562;Parent=Msa0068920-mRNA-1 |
chr1_2 | five_prime_UTR | 36228024 | 36228222 | 36228024 | ID=Msa0068920-mRNA-1:five_prime_utr;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36228223 | 36228303 | 36228223 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36228687 | 36228833 | 36228687 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36228935 | 36229002 | 36228935 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36229466 | 36229523 | 36229466 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36230223 | 36230333 | 36230223 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36230478 | 36230528 | 36230478 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36231841 | 36231984 | 36231841 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36232062 | 36232157 | 36232062 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36232696 | 36232767 | 36232696 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | CDS | 36234980 | 36235063 | 36234980 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
chr1_2 | three_prime_UTR | 36235064 | 36235361 | 36235064 | ID=Msa0068920-mRNA-1:three_prime_utr;Parent=Msa0068920-mRNA-1 |
Gene Sequence |
Protein sequence |