Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068920 | OMO72179.1 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068920 | sp|Q8LSN3|FYPP_PEA | 100.000 | 303 | 0 | 0 | 1 | 303 | 1 | 303 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068920 | A0A1R3HP78 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0068920 | Msa0108550 | 0.824060 | 9.902458e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068920 | MtrunA17_Chr1g0165341 | 100.000 | 303 | 0 | 0 | 1 | 303 | 1 | 303 | 0.0 | 635 |
| Msa0068920 | MtrunA17_Chr5g0445011 | 59.539 | 304 | 120 | 3 | 2 | 303 | 3 | 305 | 2.28e-138 | 393 |
| Msa0068920 | MtrunA17_Chr8g0364041 | 56.954 | 302 | 129 | 1 | 2 | 303 | 6 | 306 | 4.26e-129 | 369 |
| Msa0068920 | MtrunA17_Chr5g0415261 | 55.960 | 302 | 132 | 1 | 2 | 303 | 6 | 306 | 6.27e-128 | 367 |
| Msa0068920 | MtrunA17_Chr8g0378521 | 60.440 | 273 | 107 | 1 | 2 | 274 | 8 | 279 | 7.69e-127 | 364 |
| Msa0068920 | MtrunA17_Chr7g0268381 | 59.341 | 273 | 110 | 1 | 2 | 274 | 13 | 284 | 2.97e-126 | 362 |
| Msa0068920 | MtrunA17_Chr1g0190121 | 42.652 | 279 | 157 | 3 | 15 | 292 | 25 | 301 | 1.91e-90 | 272 |
| Msa0068920 | MtrunA17_Chr8g0387541 | 41.158 | 311 | 168 | 6 | 3 | 300 | 6 | 314 | 4.01e-90 | 271 |
| Msa0068920 | MtrunA17_Chr1g0186811 | 45.627 | 263 | 140 | 3 | 15 | 276 | 25 | 285 | 5.66e-90 | 271 |
| Msa0068920 | MtrunA17_Chr5g0436061 | 42.657 | 286 | 161 | 3 | 7 | 291 | 34 | 317 | 7.36e-90 | 270 |
| Msa0068920 | MtrunA17_Chr7g0274931 | 42.294 | 279 | 158 | 3 | 15 | 292 | 25 | 301 | 4.97e-89 | 268 |
| Msa0068920 | MtrunA17_Chr8g0334361 | 43.346 | 263 | 146 | 3 | 15 | 276 | 23 | 283 | 2.21e-88 | 266 |
| Msa0068920 | MtrunA17_Chr7g0272371 | 44.643 | 280 | 147 | 4 | 3 | 276 | 10 | 287 | 5.54e-88 | 265 |
| Msa0068920 | MtrunA17_Chr1g0167751 | 44.487 | 263 | 143 | 3 | 15 | 276 | 25 | 285 | 4.21e-87 | 263 |
| Msa0068920 | MtrunA17_Chr3g0097231 | 45.106 | 235 | 125 | 4 | 40 | 272 | 216 | 448 | 9.51e-58 | 192 |
| Msa0068920 | MtrunA17_Chr2g0322121 | 36.585 | 287 | 163 | 7 | 6 | 276 | 654 | 937 | 3.23e-53 | 187 |
| Msa0068920 | MtrunA17_Chr2g0330331 | 42.460 | 252 | 136 | 6 | 28 | 272 | 65 | 314 | 4.53e-53 | 177 |
| Msa0068920 | MtrunA17_Chr2g0330311 | 43.220 | 236 | 128 | 6 | 40 | 272 | 243 | 475 | 1.05e-51 | 177 |
| Msa0068920 | MtrunA17_Chr4g0025471 | 36.029 | 272 | 159 | 6 | 19 | 276 | 672 | 942 | 4.37e-51 | 181 |
| Msa0068920 | MtrunA17_Chr8g0369981 | 34.589 | 292 | 129 | 12 | 28 | 259 | 105 | 394 | 1.53e-35 | 133 |
| Msa0068920 | MtrunA17_Chr1g0196211 | 35.393 | 178 | 106 | 5 | 100 | 269 | 4 | 180 | 5.22e-30 | 114 |
| Msa0068920 | MtrunA17_Chr2g0330011 | 47.788 | 113 | 49 | 4 | 31 | 134 | 242 | 353 | 4.45e-20 | 89.0 |
| Msa0068920 | MtrunA17_Chr1g0196221 | 45.882 | 85 | 40 | 1 | 20 | 98 | 552 | 636 | 3.99e-16 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068920 | AT1G50370.1 | 98.020 | 303 | 6 | 0 | 1 | 303 | 1 | 303 | 0.0 | 627 |
| Msa0068920 | AT3G19980.1 | 97.690 | 303 | 7 | 0 | 1 | 303 | 1 | 303 | 0.0 | 625 |
| Msa0068920 | AT4G26720.1 | 61.765 | 306 | 110 | 4 | 2 | 303 | 3 | 305 | 3.28e-144 | 408 |
| Msa0068920 | AT5G55260.1 | 60.197 | 304 | 118 | 3 | 2 | 303 | 3 | 305 | 1.59e-141 | 401 |
| Msa0068920 | AT5G55260.2 | 53.043 | 345 | 118 | 4 | 2 | 303 | 3 | 346 | 8.04e-133 | 381 |
| Msa0068920 | AT1G69960.1 | 56.623 | 302 | 130 | 1 | 2 | 303 | 7 | 307 | 7.71e-130 | 372 |
| Msa0068920 | AT1G10430.2 | 56.954 | 302 | 129 | 1 | 2 | 303 | 6 | 306 | 2.32e-129 | 370 |
| Msa0068920 | AT1G10430.1 | 56.954 | 302 | 129 | 1 | 2 | 303 | 6 | 306 | 2.32e-129 | 370 |
| Msa0068920 | AT3G58500.1 | 56.436 | 303 | 131 | 1 | 1 | 303 | 12 | 313 | 4.34e-129 | 370 |
| Msa0068920 | AT2G42500.1 | 56.436 | 303 | 131 | 1 | 1 | 303 | 12 | 313 | 8.17e-129 | 369 |
| Msa0068920 | AT1G59830.1 | 56.623 | 302 | 130 | 1 | 2 | 303 | 6 | 306 | 3.20e-128 | 368 |
| Msa0068920 | AT1G59830.2 | 59.504 | 242 | 98 | 0 | 2 | 243 | 6 | 247 | 2.92e-110 | 320 |
| Msa0068920 | AT2G42500.2 | 52.107 | 261 | 123 | 2 | 44 | 303 | 7 | 266 | 3.84e-97 | 287 |
| Msa0068920 | AT2G29400.1 | 44.565 | 276 | 151 | 2 | 15 | 290 | 42 | 315 | 1.19e-92 | 278 |
| Msa0068920 | AT2G39840.1 | 44.718 | 284 | 144 | 4 | 15 | 287 | 39 | 320 | 9.41e-91 | 273 |
| Msa0068920 | AT5G27840.1 | 45.714 | 280 | 144 | 4 | 3 | 276 | 14 | 291 | 3.22e-90 | 271 |
| Msa0068920 | AT5G27840.2 | 45.714 | 280 | 144 | 4 | 3 | 276 | 14 | 291 | 8.17e-90 | 271 |
| Msa0068920 | AT5G27840.3 | 45.714 | 280 | 144 | 4 | 3 | 276 | 14 | 291 | 8.17e-90 | 271 |
| Msa0068920 | AT5G27840.4 | 45.714 | 280 | 144 | 4 | 3 | 276 | 14 | 291 | 8.39e-90 | 271 |
| Msa0068920 | AT4G11240.1 | 42.230 | 296 | 163 | 5 | 10 | 300 | 22 | 314 | 1.91e-89 | 270 |
| Msa0068920 | AT5G43380.1 | 42.321 | 293 | 161 | 4 | 15 | 301 | 25 | 315 | 5.31e-89 | 269 |
| Msa0068920 | AT5G43380.2 | 42.321 | 293 | 161 | 4 | 15 | 301 | 25 | 315 | 8.16e-89 | 268 |
| Msa0068920 | AT5G43380.3 | 42.321 | 293 | 161 | 4 | 15 | 301 | 25 | 315 | 8.28e-89 | 268 |
| Msa0068920 | AT5G59160.3 | 45.038 | 262 | 141 | 3 | 16 | 276 | 36 | 295 | 9.95e-89 | 268 |
| Msa0068920 | AT5G59160.2 | 45.038 | 262 | 141 | 3 | 16 | 276 | 36 | 295 | 9.95e-89 | 268 |
| Msa0068920 | AT5G59160.1 | 45.038 | 262 | 141 | 3 | 16 | 276 | 36 | 295 | 9.95e-89 | 268 |
| Msa0068920 | AT3G46820.1 | 44.928 | 276 | 148 | 4 | 3 | 276 | 22 | 295 | 1.11e-88 | 267 |
| Msa0068920 | AT1G64040.1 | 41.581 | 291 | 163 | 4 | 15 | 300 | 26 | 314 | 1.05e-87 | 265 |
| Msa0068920 | AT3G05580.1 | 44.286 | 280 | 148 | 4 | 3 | 276 | 14 | 291 | 4.54e-87 | 263 |
| Msa0068920 | AT3G05580.2 | 45.833 | 240 | 123 | 3 | 3 | 236 | 14 | 252 | 4.35e-77 | 236 |
| Msa0068920 | AT2G42500.4 | 59.877 | 162 | 62 | 1 | 1 | 159 | 12 | 173 | 2.13e-66 | 206 |
| Msa0068920 | AT2G42500.5 | 60.119 | 168 | 62 | 2 | 1 | 165 | 12 | 177 | 2.25e-66 | 206 |
| Msa0068920 | AT2G42500.3 | 62.338 | 154 | 55 | 1 | 1 | 151 | 12 | 165 | 5.91e-66 | 204 |
| Msa0068920 | AT2G42810.1 | 44.255 | 235 | 127 | 4 | 40 | 272 | 218 | 450 | 1.49e-59 | 197 |
| Msa0068920 | AT2G42810.5 | 44.255 | 235 | 127 | 4 | 40 | 272 | 218 | 450 | 1.49e-59 | 197 |
| Msa0068920 | AT2G42810.4 | 44.255 | 235 | 127 | 4 | 40 | 272 | 218 | 450 | 1.49e-59 | 197 |
| Msa0068920 | AT2G42810.3 | 44.255 | 235 | 127 | 4 | 40 | 272 | 271 | 503 | 5.94e-59 | 197 |
| Msa0068920 | AT2G42810.2 | 44.255 | 235 | 127 | 4 | 40 | 272 | 272 | 504 | 6.73e-59 | 197 |
| Msa0068920 | AT1G03445.2 | 39.706 | 272 | 146 | 8 | 20 | 276 | 480 | 748 | 9.49e-56 | 193 |
| Msa0068920 | AT1G03445.1 | 39.706 | 272 | 146 | 8 | 20 | 276 | 480 | 748 | 1.06e-55 | 192 |
| Msa0068920 | AT4G03080.1 | 38.376 | 271 | 152 | 6 | 20 | 276 | 554 | 823 | 3.44e-54 | 189 |
| Msa0068920 | AT2G27210.2 | 35.315 | 286 | 168 | 7 | 6 | 276 | 660 | 943 | 5.54e-50 | 178 |
| Msa0068920 | AT2G27210.1 | 35.315 | 286 | 168 | 7 | 6 | 276 | 665 | 948 | 6.33e-50 | 177 |
| Msa0068920 | AT1G08420.2 | 34.965 | 286 | 169 | 7 | 6 | 276 | 671 | 954 | 3.02e-49 | 176 |
| Msa0068920 | AT1G08420.1 | 34.965 | 286 | 169 | 7 | 6 | 276 | 676 | 959 | 3.07e-49 | 176 |
| Msa0068920 | AT5G63870.1 | 35.075 | 268 | 121 | 9 | 43 | 259 | 77 | 342 | 1.14e-31 | 122 |
| Msa0068920 | AT5G63870.2 | 35.075 | 268 | 121 | 9 | 43 | 259 | 77 | 342 | 1.14e-31 | 122 |
| Msa0068920 | AT1G48120.1 | 32.226 | 301 | 140 | 9 | 19 | 259 | 629 | 925 | 2.73e-30 | 121 |
| Msa0068920 | AT5G63870.3 | 37.500 | 216 | 96 | 7 | 43 | 221 | 77 | 290 | 9.71e-29 | 112 |
| Msa0068920 | AT5G10900.3 | 31.646 | 237 | 135 | 7 | 24 | 235 | 199 | 433 | 5.91e-24 | 102 |
| Msa0068920 | AT5G10900.2 | 31.646 | 237 | 135 | 7 | 24 | 235 | 199 | 433 | 6.33e-24 | 102 |
| Msa0068920 | AT5G10900.1 | 31.646 | 237 | 135 | 7 | 24 | 235 | 199 | 433 | 6.43e-24 | 102 |
Find 76 sgRNAs with CRISPR-Local
Find 487 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCCATATTTCTTATAATT+TGG | 0.153299 | 1_2:+36235046 | Msa0068920:exon |
| TCCTCCTTCTCCTCTTGTTT+TGG | 0.161284 | 1_2:+36228129 | Msa0068920:five_prime_UTR |
| AAACTAGAATGTTCAATATT+TGG | 0.194606 | 1_2:-36235217 | None:intergenic |
| TTGTAAAATTATGCAGTAAA+TGG | 0.198566 | 1_2:+36235089 | Msa0068920:three_prime_UTR |
| TCTTAGTTTCAATGAAAATA+TGG | 0.227077 | 1_2:+36232746 | Msa0068920:CDS |
| CCACAACGGTAACAATAATT+AGG | 0.237846 | 1_2:-36232708 | None:intergenic |
| GTGTGAGTTGTCTACTTTCA+TGG | 0.258082 | 1_2:-36229499 | None:intergenic |
| TCGCCAAATTATAAGAAATA+TGG | 0.270446 | 1_2:-36235049 | None:intergenic |
| ACACTTTCTGCAATTATAGA+TGG | 0.279913 | 1_2:+36230307 | Msa0068920:CDS |
| TTTCATGGTTTCCACGTAGA+AGG | 0.307041 | 1_2:-36229484 | None:intergenic |
| AAATGGCTTTCTATTATGAT+TGG | 0.333907 | 1_2:+36235106 | Msa0068920:three_prime_UTR |
| GATGAATGCCAGAGAAAGTA+TGG | 0.349004 | 1_2:+36230238 | Msa0068920:CDS |
| ATGTCACCACAAACAGTTAC+TGG | 0.360532 | 1_2:-36228735 | None:intergenic |
| ACCCAGGTGCTTTGTGTTCA+CGG | 0.361024 | 1_2:+36230472 | Msa0068920:intron |
| TAGCATTTCCATACTTTCTC+TGG | 0.362451 | 1_2:-36230246 | None:intergenic |
| AAGTACATGTTCCAAGATAA+AGG | 0.383237 | 1_2:+36232125 | Msa0068920:CDS |
| CAGTTACAAGGCCTTTATCT+TGG | 0.389398 | 1_2:-36232136 | None:intergenic |
| TGGTCAATTGTTCTGATGTC+TGG | 0.394556 | 1_2:-36230505 | None:intergenic |
| GCCCATGTTTCAATATCTTC+AGG | 0.398413 | 1_2:-36231910 | None:intergenic |
| CGGGCACGTGCCCACCGGTC+TGG | 0.402939 | 1_2:-36228791 | None:intergenic |
| CGTAGAAGGGTTATATTAGC+AGG | 0.427554 | 1_2:-36229470 | None:intergenic |
| TCTCTTCTCTTCTCTTCCCT+CGG | 0.428935 | 1_2:-36228171 | None:intergenic |
| CTCCACATAAGATCACAAAA+TGG | 0.447030 | 1_2:-36231883 | None:intergenic |
| AATAGTTGTTAGCAGTAGAA+AGG | 0.458856 | 1_2:+36228072 | Msa0068920:five_prime_UTR |
| GGTTAAAGAGATCTTAATTG+AGG | 0.467806 | 1_2:+36228686 | Msa0068920:intron |
| CTTTAACCTTCGAGATCCAT+TGG | 0.482031 | 1_2:-36228234 | None:intergenic |
| ACTGTTTGTGGTGACATTCA+TGG | 0.492582 | 1_2:+36228741 | Msa0068920:CDS |
| CCTAATTATTGTTACCGTTG+TGG | 0.493473 | 1_2:+36232708 | Msa0068920:CDS |
| GCAGTCAGTCCACGTGGAGC+TGG | 0.503063 | 1_2:+36231931 | Msa0068920:CDS |
| TTCAGATGCTTACAGTTACA+AGG | 0.508425 | 1_2:-36232148 | None:intergenic |
| CGGATCCCGGGTTACATCTG+AGG | 0.510087 | 1_2:+36231963 | Msa0068920:CDS |
| AAATATGGAACACCTGTCCT+AGG | 0.510145 | 1_2:-36235034 | None:intergenic |
| ACCTAGCTTTAAGAAGCAAA+AGG | 0.522956 | 1_2:-36228982 | None:intergenic |
| TTCATGGTTTCCACGTAGAA+GGG | 0.527118 | 1_2:-36229483 | None:intergenic |
| AGTCTCGGGCACGTGCCCAC+CGG | 0.531838 | 1_2:-36228796 | None:intergenic |
| CTAGAATGTTCAATATTTGG+TGG | 0.536035 | 1_2:-36235214 | None:intergenic |
| AATAGTCCAGTAACTGTTTG+TGG | 0.542664 | 1_2:+36228729 | Msa0068920:CDS |
| ACAATCAGATGAGAGGGCCT+AGG | 0.546455 | 1_2:+36235017 | Msa0068920:CDS |
| ATACCCAAAACAAGAGGAGA+AGG | 0.551498 | 1_2:-36228133 | None:intergenic |
| TTGTTCTGATGTCTGGAGAA+AGG | 0.553674 | 1_2:-36230498 | None:intergenic |
| CAGATGAGAGGGCCTAGGAC+AGG | 0.555018 | 1_2:+36235022 | Msa0068920:CDS |
| ACAGTTACTGGACTATTCAC+AGG | 0.560124 | 1_2:-36228723 | None:intergenic |
| TCAGTCCACGTGGAGCTGGT+TGG | 0.561248 | 1_2:+36231935 | Msa0068920:CDS |
| AGTATGGAAATGCTAATGCT+TGG | 0.570861 | 1_2:+36230254 | Msa0068920:CDS |
| AGGAGAACAATCAGATGAGA+GGG | 0.574421 | 1_2:+36235011 | Msa0068920:CDS |
| TTATGTTAAAATAGCTAGCA+AGG | 0.576226 | 1_2:+36228018 | None:intergenic |
| GTTCGTCTTCGAGAAGATGT+TGG | 0.585150 | 1_2:-36228261 | None:intergenic |
| TGGATCTCGAAGGTTAAAGA+TGG | 0.588605 | 1_2:+36228238 | Msa0068920:CDS |
| TCCTGAAGATATTGAAACAT+GGG | 0.588789 | 1_2:+36231909 | Msa0068920:CDS |
| CCCAAAACAAGAGGAGAAGG+AGG | 0.595308 | 1_2:-36228130 | None:intergenic |
| GAGGAGAACAATCAGATGAG+AGG | 0.609057 | 1_2:+36235010 | Msa0068920:CDS |
| GAGATATGGATTTGGACCAA+TGG | 0.609365 | 1_2:+36228218 | Msa0068920:exon |
| GCACATCAACTTGTACAAGA+AGG | 0.609781 | 1_2:+36232098 | Msa0068920:CDS |
| TCACAAAATGGCCCCTCGTG+AGG | 0.613649 | 1_2:-36231871 | None:intergenic |
| TAGGGTGACTTTGTTGATCG+CGG | 0.614888 | 1_2:+36228932 | Msa0068920:intron |
| GTTGATGTGCTCGACAAACA+AGG | 0.619450 | 1_2:-36232085 | None:intergenic |
| ATCCTGAAGATATTGAAACA+TGG | 0.620272 | 1_2:+36231908 | Msa0068920:CDS |
| ACATTACCTCAGATGTAACC+CGG | 0.622692 | 1_2:-36231969 | None:intergenic |
| GAACTGTGAAATTCCTCACG+AGG | 0.623314 | 1_2:+36231858 | Msa0068920:CDS |
| AGCTTTAAGAAGCAAAAGGA+TGG | 0.627769 | 1_2:-36228978 | None:intergenic |
| GTGCTCGACAAACAAGGTCA+AGG | 0.639424 | 1_2:-36232079 | None:intergenic |
| AACTGTGAAATTCCTCACGA+GGG | 0.643578 | 1_2:+36231859 | Msa0068920:CDS |
| GTAGAAGGGTTATATTAGCA+GGG | 0.645634 | 1_2:-36229469 | None:intergenic |
| TTTGGACCAATGGATCTCGA+AGG | 0.650316 | 1_2:+36228228 | Msa0068920:CDS |
| GACAGATAAGAGTCATTGAG+CGG | 0.664068 | 1_2:+36231836 | Msa0068920:intron |
| CATTACCTCAGATGTAACCC+GGG | 0.673485 | 1_2:-36231968 | None:intergenic |
| AGACATCAGAACAATTGACC+AGG | 0.675885 | 1_2:+36230507 | Msa0068920:CDS |
| TGTAAGATAGTCGAAAACAT+CGG | 0.682696 | 1_2:-36230287 | None:intergenic |
| ACATGGGCAGTCAGTCCACG+TGG | 0.685712 | 1_2:+36231925 | Msa0068920:CDS |
| ACTGTGAAATTCCTCACGAG+GGG | 0.691236 | 1_2:+36231860 | Msa0068920:CDS |
| ACAGTGTTAGTCATGTATTG+TGG | 0.694157 | 1_2:+36235129 | Msa0068920:three_prime_UTR |
| TGAAAGTAGACAACTCACAC+AGG | 0.696061 | 1_2:+36229502 | Msa0068920:CDS |
| GCTAATATAACCCTTCTACG+TGG | 0.714294 | 1_2:+36229473 | Msa0068920:CDS |
| TAGAAGCTACATTTCCACAA+CGG | 0.718445 | 1_2:-36232722 | None:intergenic |
| AAAAGCCAACCAGCTCCACG+TGG | 0.718658 | 1_2:-36231940 | None:intergenic |
| CAGGTGCTTTGTGTTCACGG+TGG | 0.738287 | 1_2:+36230475 | Msa0068920:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTATAATAAACTATATTT+CGG | - | chr1_2:36229194-36229213 | None:intergenic | 10.0% |
| !!! | CTTTATTTGTTAAAATAAAT+TGG | + | chr1_2:36229801-36229820 | Msa0068920:intron | 10.0% |
| !!! | CAATAACTTTTTTTTTTTTT+TGG | + | chr1_2:36231613-36231632 | Msa0068920:intron | 10.0% |
| !!! | TACTTTTTAAGTATATTTTA+AGG | + | chr1_2:36232789-36232808 | Msa0068920:intron | 10.0% |
| !! | AAAAATACTAAAACAAAAAT+AGG | - | chr1_2:36235188-36235207 | None:intergenic | 10.0% |
| !! | TATTATCATTATTATCGTTA+GGG | + | chr1_2:36228517-36228536 | Msa0068920:intron | 15.0% |
| !! | ATTATTATTATGAATGTTTC+AGG | + | chr1_2:36228665-36228684 | Msa0068920:intron | 15.0% |
| !! | TAGTTTATTATAGAACATTA+CGG | + | chr1_2:36229199-36229218 | Msa0068920:intron | 15.0% |
| !!! | ATATGTATCTTTTCAATAAA+AGG | + | chr1_2:36230060-36230079 | Msa0068920:intron | 15.0% |
| !! | ATTAATTTATTTATCCAAAC+AGG | - | chr1_2:36230603-36230622 | None:intergenic | 15.0% |
| !!! | TTTATTTTATCTTAGAGTTT+TGG | - | chr1_2:36230686-36230705 | None:intergenic | 15.0% |
| !!! | TTTTGCTTAATTTTAAAACA+AGG | - | chr1_2:36230949-36230968 | None:intergenic | 15.0% |
| !!! | TTGATTCTTACTTTTTAAAA+AGG | + | chr1_2:36231769-36231788 | Msa0068920:intron | 15.0% |
| !!! | TCAATATTTTCAAATAAAAC+TGG | - | chr1_2:36232645-36232664 | None:intergenic | 15.0% |
| !!! | AGTTTTATTTGAAAATATTG+AGG | + | chr1_2:36232644-36232663 | Msa0068920:intron | 15.0% |
| !! | AAAAATCAATAAAATTGCAA+AGG | + | chr1_2:36233469-36233488 | Msa0068920:intron | 15.0% |
| !!! | AAAATATTAGTCTATTAATG+AGG | + | chr1_2:36233579-36233598 | Msa0068920:intron | 15.0% |
| !!! | ACTATTTATTTTCTGTTTTT+AGG | - | chr1_2:36234052-36234071 | None:intergenic | 15.0% |
| !! | TAAAAACAGAAAATAAATAG+TGG | + | chr1_2:36234051-36234070 | Msa0068920:intron | 15.0% |
| !! | AAAAACAGAAAATAAATAGT+GGG | + | chr1_2:36234052-36234071 | Msa0068920:intron | 15.0% |
| !! | TTATTGAGTAAAATTTATGT+AGG | - | chr1_2:36234424-36234443 | None:intergenic | 15.0% |
| !!! | ATTTATTTGATTTGATCTTA+AGG | + | chr1_2:36234757-36234776 | Msa0068920:intron | 15.0% |
| !! | CTATTATCATTATTATCGTT+AGG | + | chr1_2:36228516-36228535 | Msa0068920:intron | 20.0% |
| !!! | ATAAAAATGTAATTAGTCTC+GGG | - | chr1_2:36228813-36228832 | None:intergenic | 20.0% |
| !!! | CATAAAAATGTAATTAGTCT+CGG | - | chr1_2:36228814-36228833 | None:intergenic | 20.0% |
| !! | TATGTTATGTTATGTATTGT+TGG | + | chr1_2:36228848-36228867 | Msa0068920:intron | 20.0% |
| !! | TTTGTGACTTTCTAATTTAT+TGG | + | chr1_2:36229077-36229096 | Msa0068920:intron | 20.0% |
| !! | TGATTTAGAAATTAATGAGT+TGG | + | chr1_2:36229167-36229186 | Msa0068920:intron | 20.0% |
| !!! | ATAATTGATTCAGTAATGTA+AGG | + | chr1_2:36229839-36229858 | Msa0068920:intron | 20.0% |
| !! | GTAAGAAATGTCTAAATTTA+TGG | + | chr1_2:36229908-36229927 | Msa0068920:intron | 20.0% |
| !! | TACACAAAATTAACATCAAT+TGG | - | chr1_2:36230187-36230206 | None:intergenic | 20.0% |
| !! | GTAAGAAATAATAAACGAAA+GGG | - | chr1_2:36231370-36231389 | None:intergenic | 20.0% |
| !! | TAAAGTGAAAAGTAAAAACA+GGG | - | chr1_2:36231410-36231429 | None:intergenic | 20.0% |
| !! | ATAAAGTGAAAAGTAAAAAC+AGG | - | chr1_2:36231411-36231430 | None:intergenic | 20.0% |
| !!! | AATAGTCCAATTAATGATTT+TGG | + | chr1_2:36232277-36232296 | Msa0068920:intron | 20.0% |
| !!! | ATAGTCCAATTAATGATTTT+GGG | + | chr1_2:36232278-36232297 | Msa0068920:intron | 20.0% |
| !! | TGAAAATATTGAGGTAAAAA+AGG | + | chr1_2:36232653-36232672 | Msa0068920:intron | 20.0% |
| !!! | GGTATTTTTTTTAAATTTGC+AGG | + | chr1_2:36232674-36232693 | Msa0068920:intron | 20.0% |
| !!! | TTTTTTTAAATTTGCAGGTA+TGG | + | chr1_2:36232679-36232698 | Msa0068920:intron | 20.0% |
| !! | TCTTAGTTTCAATGAAAATA+TGG | + | chr1_2:36232746-36232765 | Msa0068920:CDS | 20.0% |
| !! | TCTTGATTTATTTAACATGA+AGG | - | chr1_2:36232947-36232966 | None:intergenic | 20.0% |
| !!! | TTATATTTGTTGGAATTAAG+AGG | + | chr1_2:36232996-36233015 | Msa0068920:intron | 20.0% |
| !! | AGGAATATATAAACTAAAGT+AGG | + | chr1_2:36233715-36233734 | Msa0068920:intron | 20.0% |
| !! | TGACTATCAACATTATTATT+TGG | + | chr1_2:36234258-36234277 | Msa0068920:intron | 20.0% |
| !!! | TATTATTTGGTTTGCATTTT+TGG | + | chr1_2:36234271-36234290 | Msa0068920:intron | 20.0% |
| !!! | CTTTATTTAACTATTGGATA+TGG | - | chr1_2:36234545-36234564 | None:intergenic | 20.0% |
| !!! | TAGTGACTTTATTTAACTAT+TGG | - | chr1_2:36234551-36234570 | None:intergenic | 20.0% |
| !! | AGTCACTAAATAAAATTGAA+AGG | + | chr1_2:36234563-36234582 | Msa0068920:intron | 20.0% |
| !! | GTCACTAAATAAAATTGAAA+GGG | + | chr1_2:36234564-36234583 | Msa0068920:intron | 20.0% |
| !! | TCACTAAATAAAATTGAAAG+GGG | + | chr1_2:36234565-36234584 | Msa0068920:intron | 20.0% |
| !!! | TTGAACTAATTTGCAATTTT+TGG | + | chr1_2:36234628-36234647 | Msa0068920:intron | 20.0% |
| !! | ATCAAATCAAATAAATAGCA+GGG | - | chr1_2:36234753-36234772 | None:intergenic | 20.0% |
| !! | GTTCCATATTTCTTATAATT+TGG | + | chr1_2:36235046-36235065 | Msa0068920:exon | 20.0% |
| !! | TTGTAAAATTATGCAGTAAA+TGG | + | chr1_2:36235089-36235108 | Msa0068920:three_prime_UTR | 20.0% |
| !! | AAACTAGAATGTTCAATATT+TGG | - | chr1_2:36235220-36235239 | None:intergenic | 20.0% |
| !!! | TGTGAATTATTTTTGTTGAC+TGG | + | chr1_2:36228043-36228062 | Msa0068920:five_prime_UTR | 25.0% |
| !!! | AATTATTTTTGTTGACTGGA+GGG | + | chr1_2:36228047-36228066 | Msa0068920:five_prime_UTR | 25.0% |
| ! | ACAAAACAAAAAGTGAGATA+TGG | + | chr1_2:36228204-36228223 | Msa0068920:exon | 25.0% |
| !! | CGAGACTAATTACATTTTTA+TGG | + | chr1_2:36228812-36228831 | Msa0068920:CDS | 25.0% |
| !!! | TGTGTTGATTAATGTGTTTT+AGG | + | chr1_2:36228913-36228932 | Msa0068920:intron | 25.0% |
| !!! | GTGTTGATTAATGTGTTTTA+GGG | + | chr1_2:36228914-36228933 | Msa0068920:intron | 25.0% |
| !! | ACCACACAGATAATAATTTT+AGG | + | chr1_2:36229142-36229161 | Msa0068920:intron | 25.0% |
| ! | TCCTAAAATTATTATCTGTG+TGG | - | chr1_2:36229146-36229165 | None:intergenic | 25.0% |
| ! | ATCTTGAATGTTAGAGTTAT+TGG | + | chr1_2:36229382-36229401 | Msa0068920:intron | 25.0% |
| ! | TCTTGAATGTTAGAGTTATT+GGG | + | chr1_2:36229383-36229402 | Msa0068920:intron | 25.0% |
| ! | CTGCTTAAAATGTTAACTTA+AGG | - | chr1_2:36229576-36229595 | None:intergenic | 25.0% |
| !! | TTAACATTTTAAGCAGAACA+TGG | + | chr1_2:36229580-36229599 | Msa0068920:intron | 25.0% |
| !! | TAACATTTTAAGCAGAACAT+GGG | + | chr1_2:36229581-36229600 | Msa0068920:intron | 25.0% |
| !!! | GCTAATGATGTTTTGTTTTT+GGG | + | chr1_2:36229702-36229721 | Msa0068920:intron | 25.0% |
| !!! | CTAATGATGTTTTGTTTTTG+GGG | + | chr1_2:36229703-36229722 | Msa0068920:intron | 25.0% |
| !!! | TAATGATGTTTTGTTTTTGG+GGG | + | chr1_2:36229704-36229723 | Msa0068920:intron | 25.0% |
| ! | TAACTGCGATATAAACTAAT+AGG | + | chr1_2:36229777-36229796 | Msa0068920:intron | 25.0% |
| !! | CTTAGATGATAGTTTTTGAA+AGG | + | chr1_2:36229954-36229973 | Msa0068920:intron | 25.0% |
| ! | CATGTTAAAAGAACTAAAAG+TGG | - | chr1_2:36230089-36230108 | None:intergenic | 25.0% |
| ! | TTCTAATGGCATTTCAAAAA+GGG | - | chr1_2:36230144-36230163 | None:intergenic | 25.0% |
| ! | TTTCTAATGGCATTTCAAAA+AGG | - | chr1_2:36230145-36230164 | None:intergenic | 25.0% |
| ! | TTCTCATCTCTAATTTCTAA+TGG | - | chr1_2:36230158-36230177 | None:intergenic | 25.0% |
| !! | TGTGTATTTAATATTTTGCC+AGG | + | chr1_2:36230201-36230220 | Msa0068920:intron | 25.0% |
| ! | TGTATCTGTGTATTATACTA+TGG | + | chr1_2:36230576-36230595 | Msa0068920:intron | 25.0% |
| ! | AAACATTTGCAAGATTGTTT+AGG | - | chr1_2:36230810-36230829 | None:intergenic | 25.0% |
| ! | TCAAATAAGCTAATCCAAAT+AGG | + | chr1_2:36230846-36230865 | Msa0068920:intron | 25.0% |
| ! | ATTAACATGTTGTGGTAAAA+GGG | - | chr1_2:36231090-36231109 | None:intergenic | 25.0% |
| ! | TATTAACATGTTGTGGTAAA+AGG | - | chr1_2:36231091-36231110 | None:intergenic | 25.0% |
| ! | CTAGAATAAAGTAAGGAAAA+AGG | - | chr1_2:36231119-36231138 | None:intergenic | 25.0% |
| !! | CTTTTTCCTTACTTTATTCT+AGG | + | chr1_2:36231117-36231136 | Msa0068920:intron | 25.0% |
| ! | TGATTTCCTAGAATAAAGTA+AGG | - | chr1_2:36231126-36231145 | None:intergenic | 25.0% |
| ! | CGTAAGAAATAATAAACGAA+AGG | - | chr1_2:36231371-36231390 | None:intergenic | 25.0% |
| !!! | TTTGGTTTGACAAAAAAGAA+TGG | - | chr1_2:36231503-36231522 | None:intergenic | 25.0% |
| ! | AAACTGATATCTTATTGTAG+TGG | - | chr1_2:36231703-36231722 | None:intergenic | 25.0% |
| !!! | GATTAATTTTTTTGACCAAC+TGG | + | chr1_2:36232199-36232218 | Msa0068920:intron | 25.0% |
| !! | TAGTCCAATTAATGATTTTG+GGG | + | chr1_2:36232279-36232298 | Msa0068920:intron | 25.0% |
| ! | TCTTTATGGGATAAAATTGA+GGG | - | chr1_2:36232472-36232491 | None:intergenic | 25.0% |
| ! | ATCTTTATGGGATAAAATTG+AGG | - | chr1_2:36232473-36232492 | None:intergenic | 25.0% |
| ! | ATGAGATATGCAAAAAACAA+AGG | - | chr1_2:36232859-36232878 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTGCATATCTCA+TGG | + | chr1_2:36232858-36232877 | Msa0068920:intron | 25.0% |
| !!! | TTGTTTTTTGCATATCTCAT+GGG | + | chr1_2:36232859-36232878 | Msa0068920:intron | 25.0% |
| ! | CATACAAGAAGAAATACTAT+TGG | - | chr1_2:36232923-36232942 | None:intergenic | 25.0% |
| ! | TTAAATAAATCAAGAGACAC+AGG | + | chr1_2:36232952-36232971 | Msa0068920:intron | 25.0% |
| ! | CTCTTTACTCTTATATTTGT+TGG | + | chr1_2:36232986-36233005 | Msa0068920:intron | 25.0% |
| ! | CAAAACAATGACTTATTTGA+GGG | + | chr1_2:36233053-36233072 | Msa0068920:intron | 25.0% |
| !! | TTCTTCGTAGTTTAAAATGA+CGG | + | chr1_2:36233230-36233249 | Msa0068920:intron | 25.0% |
| !! | AGAGGATTTTCTTATGAAAT+TGG | + | chr1_2:36233264-36233283 | Msa0068920:intron | 25.0% |
| ! | TTATGAAATTGGATGTTCAA+AGG | + | chr1_2:36233275-36233294 | Msa0068920:intron | 25.0% |
| ! | TATGAAATTGGATGTTCAAA+GGG | + | chr1_2:36233276-36233295 | Msa0068920:intron | 25.0% |
| !!! | AATTTTAGGAATCAGATGTA+AGG | + | chr1_2:36233525-36233544 | Msa0068920:intron | 25.0% |
| ! | AAATGAGATGTAGATGTAAA+TGG | + | chr1_2:36233548-36233567 | Msa0068920:intron | 25.0% |
| !! | ATATTAGTCTATTAATGAGG+AGG | + | chr1_2:36233582-36233601 | Msa0068920:intron | 25.0% |
| !!! | TTGTTGAATAAAAGGTGTTT+AGG | + | chr1_2:36233695-36233714 | Msa0068920:intron | 25.0% |
| !! | TTTTCCTAAATCTAATAGCA+AGG | + | chr1_2:36233836-36233855 | Msa0068920:intron | 25.0% |
| ! | TAGAATGACTGAAATAAAGA+TGG | + | chr1_2:36233882-36233901 | Msa0068920:intron | 25.0% |
| !!! | ATAAAGATGGCTATTTTAGT+AGG | + | chr1_2:36233895-36233914 | Msa0068920:intron | 25.0% |
| !! | TTTAGTAGGATAGGATTTTT+AGG | + | chr1_2:36233909-36233928 | Msa0068920:intron | 25.0% |
| !! | ATCAAATGTAGTCAAGATTT+TGG | + | chr1_2:36234076-36234095 | Msa0068920:intron | 25.0% |
| !! | TCAAATGTAGTCAAGATTTT+GGG | + | chr1_2:36234077-36234096 | Msa0068920:intron | 25.0% |
| ! | CAATTGTGTAAATAAATCGA+GGG | - | chr1_2:36234236-36234255 | None:intergenic | 25.0% |
| ! | ACAATTGTGTAAATAAATCG+AGG | - | chr1_2:36234237-36234256 | None:intergenic | 25.0% |
| !! | AACTAAGAGTATATAGAGTT+CGG | - | chr1_2:36234299-36234318 | None:intergenic | 25.0% |
| !! | GAGTGTTAAAAAGTGTATAT+AGG | - | chr1_2:36234333-36234352 | None:intergenic | 25.0% |
| ! | CACTAAATAAAATTGAAAGG+GGG | + | chr1_2:36234566-36234585 | Msa0068920:intron | 25.0% |
| !!! | TAATTTGCAATTTTTGGTGT+TGG | + | chr1_2:36234634-36234653 | Msa0068920:intron | 25.0% |
| ! | GATCAAATCAAATAAATAGC+AGG | - | chr1_2:36234754-36234773 | None:intergenic | 25.0% |
| !!! | TATTTGATTTGATCTTAAGG+TGG | + | chr1_2:36234760-36234779 | Msa0068920:intron | 25.0% |
| ! | ACAAAGCAGTAAATTTCATT+AGG | - | chr1_2:36234803-36234822 | None:intergenic | 25.0% |
| !! | TTTGTAAACTTGGATTTTGA+TGG | + | chr1_2:36234892-36234911 | Msa0068920:intron | 25.0% |
| ! | TCGCCAAATTATAAGAAATA+TGG | - | chr1_2:36235052-36235071 | None:intergenic | 25.0% |
| ! | AAATGGCTTTCTATTATGAT+TGG | + | chr1_2:36235106-36235125 | Msa0068920:three_prime_UTR | 25.0% |
| !!! | CAAATGCATTGTTTTTTCTT+AGG | + | chr1_2:36235157-36235176 | Msa0068920:three_prime_UTR | 25.0% |
| !!! | GAATTATTTTTGTTGACTGG+AGG | + | chr1_2:36228046-36228065 | Msa0068920:five_prime_UTR | 30.0% |
| AATAGTTGTTAGCAGTAGAA+AGG | + | chr1_2:36228072-36228091 | Msa0068920:five_prime_UTR | 30.0% | |
| ACAAAAATACCCAAAACAAG+AGG | - | chr1_2:36228142-36228161 | None:intergenic | 30.0% | |
| CAAAAAGTGAGATATGGATT+TGG | + | chr1_2:36228210-36228229 | Msa0068920:exon | 30.0% | |
| GGTTAAAGAGATCTTAATTG+AGG | + | chr1_2:36228686-36228705 | Msa0068920:intron | 30.0% | |
| ATGTTATGTATTGTTGGATC+TGG | + | chr1_2:36228854-36228873 | Msa0068920:intron | 30.0% | |
| TGTTATGTATTGTTGGATCT+GGG | + | chr1_2:36228855-36228874 | Msa0068920:intron | 30.0% | |
| TGTGACTTTGAGTAATATTG+CGG | + | chr1_2:36229042-36229061 | Msa0068920:intron | 30.0% | |
| AAAGTCACAAAACTACAAAG+TGG | - | chr1_2:36229068-36229087 | None:intergenic | 30.0% | |
| AGGTATGTGTTTAATGTACT+TGG | + | chr1_2:36229522-36229541 | Msa0068920:intron | 30.0% | |
| AGAACATGGGAAGTTATTAA+AGG | + | chr1_2:36229594-36229613 | Msa0068920:intron | 30.0% | |
| CAATACACAATTGACAATGT+TGG | - | chr1_2:36229646-36229665 | None:intergenic | 30.0% | |
| !!! | GGCTAATGATGTTTTGTTTT+TGG | + | chr1_2:36229701-36229720 | Msa0068920:intron | 30.0% |
| !!! | AATGATGTTTTGTTTTTGGG+GGG | + | chr1_2:36229705-36229724 | Msa0068920:intron | 30.0% |
| CAATATTGCAATATTGCACA+TGG | + | chr1_2:36230111-36230130 | Msa0068920:intron | 30.0% | |
| ! | TTAATATTTTGCCAGGTCTA+TGG | + | chr1_2:36230208-36230227 | Msa0068920:intron | 30.0% |
| TGTAAGATAGTCGAAAACAT+CGG | - | chr1_2:36230290-36230309 | None:intergenic | 30.0% | |
| ACACTTTCTGCAATTATAGA+TGG | + | chr1_2:36230307-36230326 | Msa0068920:CDS | 30.0% | |
| TATTATACTATGGTCCTGTT+TGG | + | chr1_2:36230586-36230605 | Msa0068920:intron | 30.0% | |
| ACAATAAGTGCTTGTGTTAT+AGG | - | chr1_2:36230632-36230651 | None:intergenic | 30.0% | |
| ! | ACTGTTTTCATTAGCTATCT+TGG | + | chr1_2:36230733-36230752 | Msa0068920:intron | 30.0% |
| TAGCTATCTTGGAGAATTTA+TGG | + | chr1_2:36230744-36230763 | Msa0068920:intron | 30.0% | |
| AGTTATTCCAAATGCACTTA+GGG | - | chr1_2:36230872-36230891 | None:intergenic | 30.0% | |
| AAGTTATTCCAAATGCACTT+AGG | - | chr1_2:36230873-36230892 | None:intergenic | 30.0% | |
| !! | GGACAGCTTTTGAAAATTAT+GGG | - | chr1_2:36230928-36230947 | None:intergenic | 30.0% |
| !! | AGGACAGCTTTTGAAAATTA+TGG | - | chr1_2:36230929-36230948 | None:intergenic | 30.0% |
| CGTTATTATACATTGCAAGT+TGG | - | chr1_2:36230988-36231007 | None:intergenic | 30.0% | |
| GGAGAAATATTAACATGTTG+TGG | - | chr1_2:36231098-36231117 | None:intergenic | 30.0% | |
| ! | TTTATTCTAGGAAATCAGAG+AGG | + | chr1_2:36231129-36231148 | Msa0068920:intron | 30.0% |
| TTGAAAACATGTGTTCGTTT+AGG | + | chr1_2:36231174-36231193 | Msa0068920:intron | 30.0% | |
| TGAAAACATGTGTTCGTTTA+GGG | + | chr1_2:36231175-36231194 | Msa0068920:intron | 30.0% | |
| CCTATACAGATCTTAATATC+AGG | - | chr1_2:36231436-36231455 | None:intergenic | 30.0% | |
| CCTGATATTAAGATCTGTAT+AGG | + | chr1_2:36231433-36231452 | Msa0068920:intron | 30.0% | |
| AGATCTGTATAGGAATAATC+AGG | + | chr1_2:36231443-36231462 | Msa0068920:intron | 30.0% | |
| GATCTGTATAGGAATAATCA+GGG | + | chr1_2:36231444-36231463 | Msa0068920:intron | 30.0% | |
| !!! | CTTTTTTGTCAAACCAAAAC+AGG | + | chr1_2:36231505-36231524 | Msa0068920:intron | 30.0% |
| !! | TTCATTTTGCTGTACTTGTT+TGG | + | chr1_2:36231572-36231591 | Msa0068920:intron | 30.0% |
| ATCCTGAAGATATTGAAACA+TGG | + | chr1_2:36231908-36231927 | Msa0068920:CDS | 30.0% | |
| TCCTGAAGATATTGAAACAT+GGG | + | chr1_2:36231909-36231928 | Msa0068920:CDS | 30.0% | |
| ! | ATTGAATTGAGCTTTATGTG+TGG | + | chr1_2:36232011-36232030 | Msa0068920:intron | 30.0% |
| ! | TTGAATTGAGCTTTATGTGT+GGG | + | chr1_2:36232012-36232031 | Msa0068920:intron | 30.0% |
| GATTAAACTGCATGAAAAGA+AGG | - | chr1_2:36232049-36232068 | None:intergenic | 30.0% | |
| AAGTACATGTTCCAAGATAA+AGG | + | chr1_2:36232125-36232144 | Msa0068920:CDS | 30.0% | |
| ! | CTATAGTCTTTTCAAATGAC+CGG | - | chr1_2:36232243-36232262 | None:intergenic | 30.0% |
| ! | AGTCCAATTAATGATTTTGG+GGG | + | chr1_2:36232280-36232299 | Msa0068920:intron | 30.0% |
| ! | TTTTATCCCATAAAGATCCA+AGG | + | chr1_2:36232476-36232495 | Msa0068920:intron | 30.0% |
| TTTATCCCATAAAGATCCAA+GGG | + | chr1_2:36232477-36232496 | Msa0068920:intron | 30.0% | |
| !! | CATCTAAATGGATTAGTCAA+TGG | - | chr1_2:36232559-36232578 | None:intergenic | 30.0% |
| ! | CATTGACTAATCCATTTAGA+TGG | + | chr1_2:36232557-36232576 | Msa0068920:intron | 30.0% |
| GCAAAACAATGACTTATTTG+AGG | + | chr1_2:36233052-36233071 | Msa0068920:intron | 30.0% | |
| TCAGATTGTCAGTTACATAT+GGG | + | chr1_2:36233123-36233142 | Msa0068920:intron | 30.0% | |
| ACCAATATATATCATGTACC+CGG | + | chr1_2:36233177-36233196 | Msa0068920:intron | 30.0% | |
| GGTATTAGGGATGAAAATAA+CGG | + | chr1_2:36233300-36233319 | Msa0068920:intron | 30.0% | |
| GTATTAGGGATGAAAATAAC+GGG | + | chr1_2:36233301-36233320 | Msa0068920:intron | 30.0% | |
| ! | ATGAAAATAACGGGACAATA+TGG | + | chr1_2:36233310-36233329 | Msa0068920:intron | 30.0% |
| ATATATCATGATATGTCCTG+AGG | + | chr1_2:36233389-36233408 | Msa0068920:intron | 30.0% | |
| ! | AGATGCGCTATTGAAATTTT+AGG | + | chr1_2:36233511-36233530 | Msa0068920:intron | 30.0% |
| GACCAAAGTTGTTGAATAAA+AGG | + | chr1_2:36233687-36233706 | Msa0068920:intron | 30.0% | |
| ! | CACCTTTTATTCAACAACTT+TGG | - | chr1_2:36233692-36233711 | None:intergenic | 30.0% |
| TTTAGGAAAATCTGATCACT+GGG | - | chr1_2:36233826-36233845 | None:intergenic | 30.0% | |
| ATTTAGGAAAATCTGATCAC+TGG | - | chr1_2:36233827-36233846 | None:intergenic | 30.0% | |
| !! | AGATCCTTGCTATTAGATTT+AGG | - | chr1_2:36233843-36233862 | None:intergenic | 30.0% |
| TCTAATAGCAAGGATCTATT+TGG | + | chr1_2:36233846-36233865 | Msa0068920:intron | 30.0% | |
| GGATAGATCGAAGATTAAAT+AGG | + | chr1_2:36234015-36234034 | Msa0068920:intron | 30.0% | |
| ! | CAAATGTAGTCAAGATTTTG+GGG | + | chr1_2:36234078-36234097 | Msa0068920:intron | 30.0% |
| TGTGAAAATGCGTGAAAAAT+TGG | + | chr1_2:36234139-36234158 | Msa0068920:intron | 30.0% | |
| TTTACTCAATAAGAGAGTGA+AGG | + | chr1_2:36234432-36234451 | Msa0068920:intron | 30.0% | |
| TTGTAGTGAAGGATCTAAAT+AGG | - | chr1_2:36234498-36234517 | None:intergenic | 30.0% | |
| TTGTGTGTTGAAACATTTGT+CGG | + | chr1_2:36234834-36234853 | Msa0068920:intron | 30.0% | |
| ACATGTGATCTTTGTAAACT+TGG | + | chr1_2:36234882-36234901 | Msa0068920:intron | 30.0% | |
| ! | CTTATATGTTCCTAGCATTT+TGG | + | chr1_2:36234926-36234945 | Msa0068920:intron | 30.0% |
| TGTTACAAGAAAACATCCAA+GGG | - | chr1_2:36234959-36234978 | None:intergenic | 30.0% | |
| ! | TAAGTTTTTCACTGAAACAG+AGG | + | chr1_2:36234991-36235010 | Msa0068920:CDS | 30.0% |
| CTAGAATGTTCAATATTTGG+TGG | - | chr1_2:36235217-36235236 | None:intergenic | 30.0% | |
| !!! | TTTTGTCATTTTTCATCGTG+AGG | - | chr1_2:36235288-36235307 | None:intergenic | 30.0% |
| !! | ATTATCGTTAGGGCTTTGTT+TGG | + | chr1_2:36228527-36228546 | Msa0068920:intron | 35.0% |
| AATAGTCCAGTAACTGTTTG+TGG | + | chr1_2:36228729-36228748 | Msa0068920:CDS | 35.0% | |
| ! | CTAATGAAACTTTTCCAGAC+CGG | + | chr1_2:36228777-36228796 | Msa0068920:CDS | 35.0% |
| !! | AGCTTTAAGAAGCAAAAGGA+TGG | - | chr1_2:36228981-36229000 | None:intergenic | 35.0% |
| ! | TCCTTTTGCTTCTTAAAGCT+AGG | + | chr1_2:36228981-36229000 | Msa0068920:CDS | 35.0% |
| !! | ACCTAGCTTTAAGAAGCAAA+AGG | - | chr1_2:36228985-36229004 | None:intergenic | 35.0% |
| TCTAATTTATTGGTCGTGCT+TGG | + | chr1_2:36229087-36229106 | Msa0068920:intron | 35.0% | |
| TTGTATATGTGTCTGTGTCT+GGG | - | chr1_2:36229121-36229140 | None:intergenic | 35.0% | |
| !! | CTTCTTTGTTGTTGTTGTTG+TGG | + | chr1_2:36229269-36229288 | Msa0068920:intron | 35.0% |
| GTAGAAGGGTTATATTAGCA+GGG | - | chr1_2:36229472-36229491 | None:intergenic | 35.0% | |
| TGTGTATTGCAAAAAGTAGC+AGG | + | chr1_2:36229657-36229676 | Msa0068920:intron | 35.0% | |
| CATCATAAAATCCATAGACC+TGG | - | chr1_2:36230222-36230241 | None:intergenic | 35.0% | |
| TAGCATTTCCATACTTTCTC+TGG | - | chr1_2:36230249-36230268 | None:intergenic | 35.0% | |
| AGTATGGAAATGCTAATGCT+TGG | + | chr1_2:36230254-36230273 | Msa0068920:CDS | 35.0% | |
| CGTAACTCTCTTATATGCTA+TGG | + | chr1_2:36230446-36230465 | Msa0068920:intron | 35.0% | |
| ! | TTATACATTGCAAGTTGGCA+TGG | - | chr1_2:36230983-36231002 | None:intergenic | 35.0% |
| GGTTTACATACACAATGTCA+AGG | - | chr1_2:36231061-36231080 | None:intergenic | 35.0% | |
| ! | CACATGTTTTCAAACCAAAC+AGG | - | chr1_2:36231167-36231186 | None:intergenic | 35.0% |
| AACGAAAGGGAAATGTTAAC+CGG | - | chr1_2:36231357-36231376 | None:intergenic | 35.0% | |
| GTACAGCAAAATGAAACTGA+AGG | - | chr1_2:36231567-36231586 | None:intergenic | 35.0% | |
| CTCCACATAAGATCACAAAA+TGG | - | chr1_2:36231886-36231905 | None:intergenic | 35.0% | |
| ! | TTACATCTGAGGTAATGTCA+TGG | + | chr1_2:36231974-36231993 | Msa0068920:intron | 35.0% |
| TTCAGATGCTTACAGTTACA+AGG | - | chr1_2:36232151-36232170 | None:intergenic | 35.0% | |
| ! | GTCCAATTAATGATTTTGGG+GGG | + | chr1_2:36232281-36232300 | Msa0068920:intron | 35.0% |
| !! | TCCAATTAATGATTTTGGGG+GGG | + | chr1_2:36232282-36232301 | Msa0068920:intron | 35.0% |
| ! | GCTTCTCTTTCTGAGTATTT+TGG | + | chr1_2:36232425-36232444 | Msa0068920:intron | 35.0% |
| ATTCACCCTTGGATCTTTAT+GGG | - | chr1_2:36232485-36232504 | None:intergenic | 35.0% | |
| TATTCACCCTTGGATCTTTA+TGG | - | chr1_2:36232486-36232505 | None:intergenic | 35.0% | |
| GATTTGTCTGTAAATTGAGC+TGG | - | chr1_2:36232517-36232536 | None:intergenic | 35.0% | |
| TACAGACAAATCACTTGAGA+AGG | + | chr1_2:36232525-36232544 | Msa0068920:intron | 35.0% | |
| ACAGACAAATCACTTGAGAA+GGG | + | chr1_2:36232526-36232545 | Msa0068920:intron | 35.0% | |
| CCACAACGGTAACAATAATT+AGG | - | chr1_2:36232711-36232730 | None:intergenic | 35.0% | |
| CCTAATTATTGTTACCGTTG+TGG | + | chr1_2:36232708-36232727 | Msa0068920:CDS | 35.0% | |
| TAGAAGCTACATTTCCACAA+CGG | - | chr1_2:36232725-36232744 | None:intergenic | 35.0% | |
| GTCTTGATTGTTGCATCATT+TGG | + | chr1_2:36232815-36232834 | Msa0068920:intron | 35.0% | |
| AATAAATCAAGAGACACAGG+AGG | + | chr1_2:36232955-36232974 | Msa0068920:intron | 35.0% | |
| ATAAATCAAGAGACACAGGA+GGG | + | chr1_2:36232956-36232975 | Msa0068920:intron | 35.0% | |
| TGACTTATTTGAGGGATAGT+TGG | + | chr1_2:36233061-36233080 | Msa0068920:intron | 35.0% | |
| GTCAGATTGTCAGTTACATA+TGG | + | chr1_2:36233122-36233141 | Msa0068920:intron | 35.0% | |
| CAGATTGTCAGTTACATATG+GGG | + | chr1_2:36233124-36233143 | Msa0068920:intron | 35.0% | |
| ACCGGGTACATGATATATAT+TGG | - | chr1_2:36233181-36233200 | None:intergenic | 35.0% | |
| AATATATATCATGTACCCGG+TGG | + | chr1_2:36233180-36233199 | Msa0068920:intron | 35.0% | |
| ! | ATGACGGCTTTAATGTTAAG+AGG | + | chr1_2:36233246-36233265 | Msa0068920:intron | 35.0% |
| !! | ATGTTCAAAGGGAGGTATTA+GGG | + | chr1_2:36233287-36233306 | Msa0068920:intron | 35.0% |
| !!! | GATGGCTATTTTAGTAGGAT+AGG | + | chr1_2:36233900-36233919 | Msa0068920:intron | 35.0% |
| !! | AGGATTTTTAGGCAACTGAA+TGG | + | chr1_2:36233920-36233939 | Msa0068920:intron | 35.0% |
| GGTAAAACACCAATAAGCTT+AGG | + | chr1_2:36233941-36233960 | Msa0068920:intron | 35.0% | |
| ! | TTTCACGCATTTTCACACAT+CGG | - | chr1_2:36234136-36234155 | None:intergenic | 35.0% |
| ATAAATCGAGGGTCAGTATA+TGG | - | chr1_2:36234225-36234244 | None:intergenic | 35.0% | |
| TTTAACACTCACTCTCCTAT+TGG | + | chr1_2:36234343-36234362 | Msa0068920:intron | 35.0% | |
| CTATTGGATGGAATTCATGT+GGG | + | chr1_2:36234359-36234378 | Msa0068920:intron | 35.0% | |
| ! | TTTATGTAGGTACCGTACTT+TGG | - | chr1_2:36234411-36234430 | None:intergenic | 35.0% |
| AATAGGTTAGAGGAGTGATA+TGG | - | chr1_2:36234481-36234500 | None:intergenic | 35.0% | |
| GAAGGATCTAAATAGGTTAG+AGG | - | chr1_2:36234491-36234510 | None:intergenic | 35.0% | |
| ATAGATATCGCTTGTAGTGA+AGG | - | chr1_2:36234509-36234528 | None:intergenic | 35.0% | |
| TAAGGTGGTAAATGTAGTGT+TGG | + | chr1_2:36234775-36234794 | Msa0068920:intron | 35.0% | |
| AAGGTGGTAAATGTAGTGTT+GGG | + | chr1_2:36234776-36234795 | Msa0068920:intron | 35.0% | |
| AATGCTAGGAACATATAAGC+AGG | - | chr1_2:36234925-36234944 | None:intergenic | 35.0% | |
| CTGTTACAAGAAAACATCCA+AGG | - | chr1_2:36234960-36234979 | None:intergenic | 35.0% | |
| ! | CTTGGATGTTTTCTTGTAAC+AGG | + | chr1_2:36234958-36234977 | Msa0068920:intron | 35.0% |
| ACAGTGTTAGTCATGTATTG+TGG | + | chr1_2:36235129-36235148 | Msa0068920:three_prime_UTR | 35.0% | |
| ATACCCAAAACAAGAGGAGA+AGG | - | chr1_2:36228136-36228155 | None:intergenic | 40.0% | |
| GAGATATGGATTTGGACCAA+TGG | + | chr1_2:36228218-36228237 | Msa0068920:exon | 40.0% | |
| CTTTAACCTTCGAGATCCAT+TGG | - | chr1_2:36228237-36228256 | None:intergenic | 40.0% | |
| TGGATCTCGAAGGTTAAAGA+TGG | + | chr1_2:36228238-36228257 | Msa0068920:CDS | 40.0% | |
| ACAGTTACTGGACTATTCAC+AGG | - | chr1_2:36228726-36228745 | None:intergenic | 40.0% | |
| ATGTCACCACAAACAGTTAC+TGG | - | chr1_2:36228738-36228757 | None:intergenic | 40.0% | |
| ACTGTTTGTGGTGACATTCA+TGG | + | chr1_2:36228741-36228760 | Msa0068920:CDS | 40.0% | |
| GTTGTATATGTGTCTGTGTC+TGG | - | chr1_2:36229122-36229141 | None:intergenic | 40.0% | |
| ! | CAAACCTTTTCCCACTAAGT+GGG | - | chr1_2:36229249-36229268 | None:intergenic | 40.0% |
| GTGTCTGACACTGATACTAT+TGG | - | chr1_2:36229306-36229325 | None:intergenic | 40.0% | |
| AAACACCTACGTAGCATTGT+CGG | - | chr1_2:36229360-36229379 | None:intergenic | 40.0% | |
| CGTAGAAGGGTTATATTAGC+AGG | - | chr1_2:36229473-36229492 | None:intergenic | 40.0% | |
| GCTAATATAACCCTTCTACG+TGG | + | chr1_2:36229473-36229492 | Msa0068920:CDS | 40.0% | |
| TTCATGGTTTCCACGTAGAA+GGG | - | chr1_2:36229486-36229505 | None:intergenic | 40.0% | |
| TTTCATGGTTTCCACGTAGA+AGG | - | chr1_2:36229487-36229506 | None:intergenic | 40.0% | |
| GTGTGAGTTGTCTACTTTCA+TGG | - | chr1_2:36229502-36229521 | None:intergenic | 40.0% | |
| TGAAAGTAGACAACTCACAC+AGG | + | chr1_2:36229502-36229521 | Msa0068920:CDS | 40.0% | |
| AAGTAGCAGGTTCAAATTCC+CGG | + | chr1_2:36229670-36229689 | Msa0068920:intron | 40.0% | |
| ! | TCTATAGGCCTTTTGTGATC+AGG | + | chr1_2:36229732-36229751 | Msa0068920:intron | 40.0% |
| GATGAATGCCAGAGAAAGTA+TGG | + | chr1_2:36230238-36230257 | Msa0068920:CDS | 40.0% | |
| CACTGCTTAAATGTGAGTAG+GGG | - | chr1_2:36230386-36230405 | None:intergenic | 40.0% | |
| GCACTGCTTAAATGTGAGTA+GGG | - | chr1_2:36230387-36230406 | None:intergenic | 40.0% | |
| TGCACTGCTTAAATGTGAGT+AGG | - | chr1_2:36230388-36230407 | None:intergenic | 40.0% | |
| TTGTTCTGATGTCTGGAGAA+AGG | - | chr1_2:36230501-36230520 | None:intergenic | 40.0% | |
| TGGTCAATTGTTCTGATGTC+TGG | - | chr1_2:36230508-36230527 | None:intergenic | 40.0% | |
| AGACATCAGAACAATTGACC+AGG | + | chr1_2:36230507-36230526 | Msa0068920:CDS | 40.0% | |
| AAATGCACTTAGGGCCTATT+TGG | - | chr1_2:36230863-36230882 | None:intergenic | 40.0% | |
| AAATAGGCCCTAAGTGCATT+TGG | + | chr1_2:36230862-36230881 | Msa0068920:intron | 40.0% | |
| AACATGTTGTGGTAAAAGGG+TGG | - | chr1_2:36231087-36231106 | None:intergenic | 40.0% | |
| !! | AATCAGAGAGGTATCAGCAA+TGG | + | chr1_2:36231141-36231160 | Msa0068920:intron | 40.0% |
| ! | GAACACATTACAGCCTGTTT+TGG | - | chr1_2:36231521-36231540 | None:intergenic | 40.0% |
| GACAGATAAGAGTCATTGAG+CGG | + | chr1_2:36231836-36231855 | Msa0068920:intron | 40.0% | |
| AACTGTGAAATTCCTCACGA+GGG | + | chr1_2:36231859-36231878 | Msa0068920:CDS | 40.0% | |
| !! | GGCCATTTTGTGATCTTATG+TGG | + | chr1_2:36231881-36231900 | Msa0068920:CDS | 40.0% |
| GCCCATGTTTCAATATCTTC+AGG | - | chr1_2:36231913-36231932 | None:intergenic | 40.0% | |
| ACATTACCTCAGATGTAACC+CGG | - | chr1_2:36231972-36231991 | None:intergenic | 40.0% | |
| GCACATCAACTTGTACAAGA+AGG | + | chr1_2:36232098-36232117 | Msa0068920:CDS | 40.0% | |
| CAGTTACAAGGCCTTTATCT+TGG | - | chr1_2:36232139-36232158 | None:intergenic | 40.0% | |
| !!! | TTTGACCAACTGGTCTTTTG+AGG | + | chr1_2:36232209-36232228 | Msa0068920:intron | 40.0% |
| !! | CCAATTAATGATTTTGGGGG+GGG | + | chr1_2:36232283-36232302 | Msa0068920:intron | 40.0% |
| !! | CAATTAATGATTTTGGGGGG+GGG | + | chr1_2:36232284-36232303 | Msa0068920:intron | 40.0% |
| !! | AATTAATGATTTTGGGGGGG+GGG | + | chr1_2:36232285-36232304 | Msa0068920:intron | 40.0% |
| GCTTACTTGAAACACTTCAG+GGG | - | chr1_2:36232327-36232346 | None:intergenic | 40.0% | |
| CGCTTACTTGAAACACTTCA+GGG | - | chr1_2:36232328-36232347 | None:intergenic | 40.0% | |
| TCGCTTACTTGAAACACTTC+AGG | - | chr1_2:36232329-36232348 | None:intergenic | 40.0% | |
| TCTGTAAATTGAGCTGGTGT+GGG | - | chr1_2:36232511-36232530 | None:intergenic | 40.0% | |
| ACATGGTGAGACCATCTAAA+TGG | - | chr1_2:36232571-36232590 | None:intergenic | 40.0% | |
| ATTTAGATGGTCTCACCATG+TGG | + | chr1_2:36232570-36232589 | Msa0068920:intron | 40.0% | |
| TTTAGATGGTCTCACCATGT+GGG | + | chr1_2:36232571-36232590 | Msa0068920:intron | 40.0% | |
| ACCATGTGGGATAACTTTCT+TGG | + | chr1_2:36232584-36232603 | Msa0068920:intron | 40.0% | |
| ACCAAGAAAGTTATCCCACA+TGG | - | chr1_2:36232588-36232607 | None:intergenic | 40.0% | |
| ! | TGTTGCATCATTTGGCTTCA+TGG | + | chr1_2:36232823-36232842 | Msa0068920:intron | 40.0% |
| GAAATTGGATGTTCAAAGGG+AGG | + | chr1_2:36233279-36233298 | Msa0068920:intron | 40.0% | |
| !! | GATGTTCAAAGGGAGGTATT+AGG | + | chr1_2:36233286-36233305 | Msa0068920:intron | 40.0% |
| ! | TGTTCACAGTTTAAAGCCTC+AGG | - | chr1_2:36233408-36233427 | None:intergenic | 40.0% |
| CATAAATGACATGCTCTGAC+TGG | + | chr1_2:36233739-36233758 | Msa0068920:intron | 40.0% | |
| CATAGTTGAAAACCTTCCCA+TGG | - | chr1_2:36233792-36233811 | None:intergenic | 40.0% | |
| ! | AGGTTTTCAACTATGAGCTC+AGG | + | chr1_2:36233797-36233816 | Msa0068920:intron | 40.0% |
| ATAGCAAGGATCTATTTGGC+AGG | + | chr1_2:36233850-36233869 | Msa0068920:intron | 40.0% | |
| TCTCTGTTGCCTAAGCTTAT+TGG | - | chr1_2:36233953-36233972 | None:intergenic | 40.0% | |
| GCATCTGTGGACAATTTATG+AGG | + | chr1_2:36233983-36234002 | Msa0068920:intron | 40.0% | |
| TGCTGCAGAACTTAAACCAA+AGG | + | chr1_2:36234104-36234123 | Msa0068920:intron | 40.0% | |
| ! | TTCACGCATTTTCACACATC+GGG | - | chr1_2:36234135-36234154 | None:intergenic | 40.0% |
| CCACATGAATTCCATCCAAT+AGG | - | chr1_2:36234361-36234380 | None:intergenic | 40.0% | |
| CCTATTGGATGGAATTCATG+TGG | + | chr1_2:36234358-36234377 | Msa0068920:intron | 40.0% | |
| ! | AGGTACCGTACTTTGGAAAT+GGG | - | chr1_2:36234404-36234423 | None:intergenic | 40.0% |
| ! | TAGGTACCGTACTTTGGAAA+TGG | - | chr1_2:36234405-36234424 | None:intergenic | 40.0% |
| !!! | TTTTGGTGTTGGCGATAGTT+AGG | + | chr1_2:36234645-36234664 | Msa0068920:intron | 40.0% |
| CAGCATAATTGTCGCCTTAA+CGG | - | chr1_2:36234687-36234706 | None:intergenic | 40.0% | |
| AGGTGGTAAATGTAGTGTTG+GGG | + | chr1_2:36234777-36234796 | Msa0068920:intron | 40.0% | |
| !! | TGAAACATTTGTCGGTGTCA+TGG | + | chr1_2:36234842-36234861 | Msa0068920:intron | 40.0% |
| AGGAGAACAATCAGATGAGA+GGG | + | chr1_2:36235011-36235030 | Msa0068920:CDS | 40.0% | |
| AAATATGGAACACCTGTCCT+AGG | - | chr1_2:36235037-36235056 | None:intergenic | 40.0% | |
| !! | TCCTCCTTCTCCTCTTGTTT+TGG | + | chr1_2:36228129-36228148 | Msa0068920:five_prime_UTR | 45.0% |
| !!! | CCTCCTTCTCCTCTTGTTTT+GGG | + | chr1_2:36228130-36228149 | Msa0068920:five_prime_UTR | 45.0% |
| TCTCTTCTCTTCTCTTCCCT+CGG | - | chr1_2:36228174-36228193 | None:intergenic | 45.0% | |
| TTTGGACCAATGGATCTCGA+AGG | + | chr1_2:36228228-36228247 | Msa0068920:CDS | 45.0% | |
| GTTCGTCTTCGAGAAGATGT+TGG | - | chr1_2:36228264-36228283 | None:intergenic | 45.0% | |
| ! | ATGAAACTTTTCCAGACCGG+TGG | + | chr1_2:36228780-36228799 | Msa0068920:CDS | 45.0% |
| ! | TGAAACTTTTCCAGACCGGT+GGG | + | chr1_2:36228781-36228800 | Msa0068920:CDS | 45.0% |
| TAGGGTGACTTTGTTGATCG+CGG | + | chr1_2:36228932-36228951 | Msa0068920:intron | 45.0% | |
| !!! | ACGGCATATTTTGATCCACG+TGG | + | chr1_2:36229218-36229237 | Msa0068920:intron | 45.0% |
| ! | CTTTTCCCACTAAGTGGGAT+TGG | - | chr1_2:36229244-36229263 | None:intergenic | 45.0% |
| CAATCCCACTTAGTGGGAAA+AGG | + | chr1_2:36229242-36229261 | Msa0068920:intron | 45.0% | |
| ! | GCAAACCTTTTCCCACTAAG+TGG | - | chr1_2:36229250-36229269 | None:intergenic | 45.0% |
| !! | GCATTGTCGGTTCACAATGA+AGG | - | chr1_2:36229347-36229366 | None:intergenic | 45.0% |
| TTCAAATTCCCGGTCATAGC+AGG | + | chr1_2:36229680-36229699 | Msa0068920:intron | 45.0% | |
| ! | ATCATTAGCCTGCTATGACC+GGG | - | chr1_2:36229691-36229710 | None:intergenic | 45.0% |
| ! | CATCATTAGCCTGCTATGAC+CGG | - | chr1_2:36229692-36229711 | None:intergenic | 45.0% |
| !! | TTTTTGGGGGGCACATCTAT+AGG | + | chr1_2:36229717-36229736 | Msa0068920:intron | 45.0% |
| CCACAGAACCTGATCACAAA+AGG | - | chr1_2:36229743-36229762 | None:intergenic | 45.0% | |
| ! | CCTTTTGTGATCAGGTTCTG+TGG | + | chr1_2:36229740-36229759 | Msa0068920:intron | 45.0% |
| TTGTGATCAGGTTCTGTGGA+AGG | + | chr1_2:36229744-36229763 | Msa0068920:intron | 45.0% | |
| TGTGATCAGGTTCTGTGGAA+GGG | + | chr1_2:36229745-36229764 | Msa0068920:intron | 45.0% | |
| ATAGAGAGAGGAAAGAGGGA+AGG | - | chr1_2:36230363-36230382 | None:intergenic | 45.0% | |
| TTATATGCTATGGTCGACCC+AGG | + | chr1_2:36230456-36230475 | Msa0068920:intron | 45.0% | |
| AAGTTGGCATGGCACACATT+TGG | - | chr1_2:36230972-36230991 | None:intergenic | 45.0% | |
| GAACTGTGAAATTCCTCACG+AGG | + | chr1_2:36231858-36231877 | Msa0068920:CDS | 45.0% | |
| ACTGTGAAATTCCTCACGAG+GGG | + | chr1_2:36231860-36231879 | Msa0068920:CDS | 45.0% | |
| CATTACCTCAGATGTAACCC+GGG | - | chr1_2:36231971-36231990 | None:intergenic | 45.0% | |
| GTTGATGTGCTCGACAAACA+AGG | - | chr1_2:36232088-36232107 | None:intergenic | 45.0% | |
| AACCACCTCAAAAGACCAGT+TGG | - | chr1_2:36232217-36232236 | None:intergenic | 45.0% | |
| CCCCCCCCAAAATCATTAAT+TGG | - | chr1_2:36232286-36232305 | None:intergenic | 45.0% | |
| !! | ATTAATGATTTTGGGGGGGG+GGG | + | chr1_2:36232286-36232305 | Msa0068920:intron | 45.0% |
| !! | AGCTTGAGCTTGCTGTTTGA+GGG | + | chr1_2:36232348-36232367 | Msa0068920:intron | 45.0% |
| !!! | GGACTCGGTTATTTTCAGGT+GGG | + | chr1_2:36232370-36232389 | Msa0068920:intron | 45.0% |
| !!! | GACTCGGTTATTTTCAGGTG+GGG | + | chr1_2:36232371-36232390 | Msa0068920:intron | 45.0% |
| !!! | ACTCGGTTATTTTCAGGTGG+GGG | + | chr1_2:36232372-36232391 | Msa0068920:intron | 45.0% |
| !!! | GTATTTTGGAGTAGCTGTCG+TGG | + | chr1_2:36232439-36232458 | Msa0068920:intron | 45.0% |
| GTCTGTAAATTGAGCTGGTG+TGG | - | chr1_2:36232512-36232531 | None:intergenic | 45.0% | |
| GTTGGCGTGTTCATTACAGT+TGG | + | chr1_2:36233079-36233098 | Msa0068920:intron | 45.0% | |
| AACAAGCATCAGCAGCTTCA+GGG | - | chr1_2:36233349-36233368 | None:intergenic | 45.0% | |
| TAACAAGCATCAGCAGCTTC+AGG | - | chr1_2:36233350-36233369 | None:intergenic | 45.0% | |
| TGACTGGAAAGTGGTACGAT+TGG | + | chr1_2:36233755-36233774 | Msa0068920:intron | 45.0% | |
| TGGAAAGTGGTACGATTGGT+CGG | + | chr1_2:36233759-36233778 | Msa0068920:intron | 45.0% | |
| TGGACAATTTATGAGGCAGC+TGG | + | chr1_2:36233990-36234009 | Msa0068920:intron | 45.0% | |
| CACAGTTACTCAAGTCTCGT+AGG | - | chr1_2:36234199-36234218 | None:intergenic | 45.0% | |
| ACACTCACTCTCCTATTGGA+TGG | + | chr1_2:36234347-36234366 | Msa0068920:intron | 45.0% | |
| TGGGACCCATTTCCAAAGTA+CGG | + | chr1_2:36234396-36234415 | Msa0068920:intron | 45.0% | |
| GCGATATCTATCCTTGTCTC+TGG | + | chr1_2:36234518-36234537 | Msa0068920:intron | 45.0% | |
| TTGGATATGGACCAGAGACA+AGG | - | chr1_2:36234532-36234551 | None:intergenic | 45.0% | |
| TGTTGGCGATAGTTAGGCTA+TGG | + | chr1_2:36234651-36234670 | Msa0068920:intron | 45.0% | |
| ! | ATGGTTGGTACATGCCGTTA+AGG | + | chr1_2:36234670-36234689 | Msa0068920:intron | 45.0% |
| GGGTCAGTAACCAAAATGCT+AGG | - | chr1_2:36234939-36234958 | None:intergenic | 45.0% | |
| !!! | GCATTTTGGTTACTGACCCT+TGG | + | chr1_2:36234940-36234959 | Msa0068920:intron | 45.0% |
| GAGGAGAACAATCAGATGAG+AGG | + | chr1_2:36235010-36235029 | Msa0068920:CDS | 45.0% | |
| !! | TAAAAAAATCATTAAATAAA+AGG | - | chr1_2:36229426-36229445 | None:intergenic | 5.0% |
| !!! | TTTATTTGTTAAAATAAATT+GGG | + | chr1_2:36229802-36229821 | Msa0068920:intron | 5.0% |
| !!! | ATTTTATTGATTTTTTAATA+TGG | - | chr1_2:36233464-36233483 | None:intergenic | 5.0% |
| !! | GATTTAAAAATAAAAATATA+TGG | - | chr1_2:36234724-36234743 | None:intergenic | 5.0% |
| CCCAAAACAAGAGGAGAAGG+AGG | - | chr1_2:36228133-36228152 | None:intergenic | 50.0% | |
| ! | ATTTTTGTTCGACAGCGCCG+AGG | + | chr1_2:36228154-36228173 | Msa0068920:five_prime_UTR | 50.0% |
| !! | TTTTTGTTCGACAGCGCCGA+GGG | + | chr1_2:36228155-36228174 | Msa0068920:five_prime_UTR | 50.0% |
| AGAGAGAGAGAGAGAGAGAG+GGG | - | chr1_2:36228095-36228114 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr1_2:36228094-36228113 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr1_2:36228095-36228114 | None:intergenic | 50.0% | |
| GTGAACCGACAATGCTACGT+AGG | + | chr1_2:36229352-36229371 | Msa0068920:intron | 50.0% | |
| GGGGATAGAGAGAGGAAAGA+GGG | - | chr1_2:36230367-36230386 | None:intergenic | 50.0% | |
| AGGGGATAGAGAGAGGAAAG+AGG | - | chr1_2:36230368-36230387 | None:intergenic | 50.0% | |
| TGTGAGTAGGGGATAGAGAG+AGG | - | chr1_2:36230375-36230394 | None:intergenic | 50.0% | |
| ACCCAGGTGCTTTGTGTTCA+CGG | + | chr1_2:36230472-36230491 | Msa0068920:intron | 50.0% | |
| ! | ACCGTGAACACAAAGCACCT+GGG | - | chr1_2:36230476-36230495 | None:intergenic | 50.0% |
| GTAGAGTTCGACCAGCAACT+GGG | - | chr1_2:36230548-36230567 | None:intergenic | 50.0% | |
| TGTAGAGTTCGACCAGCAAC+TGG | - | chr1_2:36230549-36230568 | None:intergenic | 50.0% | |
| GTTGTGGTAAAAGGGTGGAC+AGG | - | chr1_2:36231082-36231101 | None:intergenic | 50.0% | |
| GGTATCAGCAATGGCCTGTT+TGG | + | chr1_2:36231150-36231169 | Msa0068920:intron | 50.0% | |
| AACATCCTTAACCAGTGCCC+CGG | + | chr1_2:36231326-36231345 | Msa0068920:intron | 50.0% | |
| GTGCTCGACAAACAAGGTCA+AGG | - | chr1_2:36232082-36232101 | None:intergenic | 50.0% | |
| !!! | GACCAACTGGTCTTTTGAGG+TGG | + | chr1_2:36232212-36232231 | Msa0068920:intron | 50.0% |
| !!! | GTCTTTTGAGGTGGTTCGTC+CGG | + | chr1_2:36232221-36232240 | Msa0068920:intron | 50.0% |
| !! | TTAATGATTTTGGGGGGGGG+GGG | + | chr1_2:36232287-36232306 | Msa0068920:intron | 50.0% |
| !! | GAGCTTGAGCTTGCTGTTTG+AGG | + | chr1_2:36232347-36232366 | Msa0068920:intron | 50.0% |
| !! | GCTTGAGCTTGCTGTTTGAG+GGG | + | chr1_2:36232349-36232368 | Msa0068920:intron | 50.0% |
| !! | GAGGGGACTCGGTTATTTTC+AGG | + | chr1_2:36232366-36232385 | Msa0068920:intron | 50.0% |
| !! | GGGACTCGGTTATTTTCAGG+TGG | + | chr1_2:36232369-36232388 | Msa0068920:intron | 50.0% |
| ! | GAGCATTGTGGGGCAAAATC+AGG | + | chr1_2:36232394-36232413 | Msa0068920:intron | 50.0% |
| !! | GTCTAAACGCTGATTCCACC+GGG | - | chr1_2:36233198-36233217 | None:intergenic | 50.0% |
| !! | CGTCTAAACGCTGATTCCAC+CGG | - | chr1_2:36233199-36233218 | None:intergenic | 50.0% |
| ACAAGCATCAGCAGCTTCAG+GGG | - | chr1_2:36233348-36233367 | None:intergenic | 50.0% | |
| GACATGCTCTGACTGGAAAG+TGG | + | chr1_2:36233746-36233765 | Msa0068920:intron | 50.0% | |
| ! | AAAGTGGTACGATTGGTCGG+TGG | + | chr1_2:36233762-36233781 | Msa0068920:intron | 50.0% |
| AGCTTAGGCAACAGAGAGCT+TGG | + | chr1_2:36233956-36233975 | Msa0068920:intron | 50.0% | |
| AGGCAACAGAGAGCTTGGAA+AGG | + | chr1_2:36233961-36233980 | Msa0068920:intron | 50.0% | |
| !! | AGAGCTTGGAAAGGCATCTG+TGG | + | chr1_2:36233970-36233989 | Msa0068920:intron | 50.0% |
| CAATTTATGAGGCAGCTGGC+AGG | + | chr1_2:36233994-36234013 | Msa0068920:intron | 50.0% | |
| ! | TGTGGGTGTCACACTTCATG+TGG | + | chr1_2:36234376-36234395 | Msa0068920:intron | 50.0% |
| ! | GTGGGTGTCACACTTCATGT+GGG | + | chr1_2:36234377-36234396 | Msa0068920:intron | 50.0% |
| GGCGATAGTTAGGCTATGGT+TGG | + | chr1_2:36234655-36234674 | Msa0068920:intron | 50.0% | |
| ACAATCAGATGAGAGGGCCT+AGG | + | chr1_2:36235017-36235036 | Msa0068920:CDS | 50.0% | |
| !! | ACTAAGTGGGATTGGCCACG+TGG | - | chr1_2:36229236-36229255 | None:intergenic | 55.0% |
| ACGTGGCCAATCCCACTTAG+TGG | + | chr1_2:36229235-36229254 | Msa0068920:intron | 55.0% | |
| CGTGGCCAATCCCACTTAGT+GGG | + | chr1_2:36229236-36229255 | Msa0068920:intron | 55.0% | |
| ! | CACCGTGAACACAAAGCACC+TGG | - | chr1_2:36230477-36230496 | None:intergenic | 55.0% |
| CAGGTGCTTTGTGTTCACGG+TGG | + | chr1_2:36230475-36230494 | Msa0068920:intron | 55.0% | |
| GTTCGACCAGCAACTGGGAA+GGG | - | chr1_2:36230543-36230562 | None:intergenic | 55.0% | |
| AGTTCGACCAGCAACTGGGA+AGG | - | chr1_2:36230544-36230563 | None:intergenic | 55.0% | |
| GTCATGTTAACCAGTGCCCC+CGG | + | chr1_2:36231197-36231216 | Msa0068920:intron | 55.0% | |
| TCATGTTAACCAGTGCCCCC+GGG | + | chr1_2:36231198-36231217 | Msa0068920:intron | 55.0% | |
| TGCTTCCTTAACCAGTGCCC+CGG | - | chr1_2:36231219-36231238 | None:intergenic | 55.0% | |
| ACATCCTTAACCAGTGCCCC+GGG | + | chr1_2:36231327-36231346 | Msa0068920:intron | 55.0% | |
| AAATGTTAACCGGTGCCCCC+GGG | - | chr1_2:36231347-36231366 | None:intergenic | 55.0% | |
| GAAATGTTAACCGGTGCCCC+CGG | - | chr1_2:36231348-36231367 | None:intergenic | 55.0% | |
| TCACAAAATGGCCCCTCGTG+AGG | - | chr1_2:36231874-36231893 | None:intergenic | 55.0% | |
| AAAAGCCAACCAGCTCCACG+TGG | - | chr1_2:36231943-36231962 | None:intergenic | 55.0% | |
| !!! | CGTGGAGCTGGTTGGCTTTT+CGG | + | chr1_2:36231943-36231962 | Msa0068920:CDS | 55.0% |
| !!! | CTGGTTGGCTTTTCGGATCC+CGG | + | chr1_2:36231950-36231969 | Msa0068920:CDS | 55.0% |
| !!! | TGGTTGGCTTTTCGGATCCC+GGG | + | chr1_2:36231951-36231970 | Msa0068920:CDS | 55.0% |
| !! | TAATGATTTTGGGGGGGGGG+GGG | + | chr1_2:36232288-36232307 | Msa0068920:intron | 55.0% |
| !! | GCTTGCTGTTTGAGGGGACT+CGG | + | chr1_2:36232355-36232374 | Msa0068920:intron | 55.0% |
| !! | TTTCAGGTGGGGGAGCATTG+TGG | + | chr1_2:36232382-36232401 | Msa0068920:intron | 55.0% |
| !! | TTCAGGTGGGGGAGCATTGT+GGG | + | chr1_2:36232383-36232402 | Msa0068920:intron | 55.0% |
| GGTGTGGGTGTATTCACCCT+TGG | - | chr1_2:36232496-36232515 | None:intergenic | 55.0% | |
| CAAGCATCAGCAGCTTCAGG+GGG | - | chr1_2:36233347-36233366 | None:intergenic | 55.0% | |
| ATTGGTCGGTGGCGATCCAT+GGG | + | chr1_2:36233773-36233792 | Msa0068920:intron | 55.0% | |
| CACACATCGGGCATGACCTT+TGG | - | chr1_2:36234123-36234142 | None:intergenic | 55.0% | |
| GGGAAGGGAGCTAGAGAACC+TGG | - | chr1_2:36230528-36230547 | None:intergenic | 60.0% | |
| CTAGCTCCCTTCCCAGTTGC+TGG | + | chr1_2:36230534-36230553 | Msa0068920:intron | 60.0% | |
| CATGTTAACCAGTGCCCCCG+GGG | + | chr1_2:36231199-36231218 | Msa0068920:intron | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | - | chr1_2:36231216-36231235 | None:intergenic | 60.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | - | chr1_2:36231217-36231236 | None:intergenic | 60.0% | |
| GCTTCCTTAACCAGTGCCCC+GGG | - | chr1_2:36231218-36231237 | None:intergenic | 60.0% | |
| CATCCTTAACCAGTGCCCCG+GGG | + | chr1_2:36231328-36231347 | Msa0068920:intron | 60.0% | |
| ATCCTTAACCAGTGCCCCGG+GGG | + | chr1_2:36231329-36231348 | Msa0068920:intron | 60.0% | |
| AATGTTAACCGGTGCCCCCG+GGG | - | chr1_2:36231346-36231365 | None:intergenic | 60.0% | |
| ACATGGGCAGTCAGTCCACG+TGG | + | chr1_2:36231925-36231944 | Msa0068920:CDS | 60.0% | |
| TCAGTCCACGTGGAGCTGGT+TGG | + | chr1_2:36231935-36231954 | Msa0068920:CDS | 60.0% | |
| CGGATCCCGGGTTACATCTG+AGG | + | chr1_2:36231963-36231982 | Msa0068920:CDS | 60.0% | |
| !! | AATGATTTTGGGGGGGGGGG+GGG | + | chr1_2:36232289-36232308 | Msa0068920:intron | 60.0% |
| !! | TCAGGTGGGGGAGCATTGTG+GGG | + | chr1_2:36232384-36232403 | Msa0068920:intron | 60.0% |
| ! | GATTGGTCGGTGGCGATCCA+TGG | + | chr1_2:36233772-36233791 | Msa0068920:intron | 60.0% |
| CAGATGAGAGGGCCTAGGAC+AGG | + | chr1_2:36235022-36235041 | Msa0068920:CDS | 60.0% | |
| GCAGTCAGTCCACGTGGAGC+TGG | + | chr1_2:36231931-36231950 | Msa0068920:CDS | 65.0% | |
| !! | ATGATTTTGGGGGGGGGGGG+GGG | + | chr1_2:36232290-36232309 | Msa0068920:intron | 65.0% |
| GTCGGTGGCGATCCATGGGA+AGG | + | chr1_2:36233777-36233796 | Msa0068920:intron | 65.0% | |
| AGTCTCGGGCACGTGCCCAC+CGG | - | chr1_2:36228799-36228818 | None:intergenic | 70.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr1_2:36231211-36231230 | Msa0068920:intron | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr1_2:36231211-36231230 | None:intergenic | 70.0% |
| AACCAGTGCCCCCGGGGCAC+TGG | + | chr1_2:36231205-36231224 | Msa0068920:intron | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | - | chr1_2:36231335-36231354 | None:intergenic | 75.0% |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | + | chr1_2:36231335-36231354 | Msa0068920:intron | 75.0% |
| !! | ATTTTGGGGGGGGGGGGGGG+TGG | + | chr1_2:36232293-36232312 | Msa0068920:intron | 75.0% |
| ! | CGGGCACGTGCCCACCGGTC+TGG | - | chr1_2:36228794-36228813 | None:intergenic | 80.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | - | chr1_2:36231340-36231359 | None:intergenic | 80.0% |
| ! | GGGGGGGGGGGGGGTGGTAA+AGG | + | chr1_2:36232299-36232318 | Msa0068920:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 36228024 | 36235361 | 36228024 | ID=Msa0068920;Name=Msa0068920 |
| chr1_2 | mRNA | 36228024 | 36235361 | 36228024 | ID=Msa0068920-mRNA-1;Parent=Msa0068920;Name=Msa0068920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=199|1|1|1|1|1|10|298|303 |
| chr1_2 | exon | 36228024 | 36228303 | 36228024 | ID=Msa0068920-mRNA-1:exon:11553;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36228687 | 36228833 | 36228687 | ID=Msa0068920-mRNA-1:exon:11554;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36228935 | 36229002 | 36228935 | ID=Msa0068920-mRNA-1:exon:11555;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36229466 | 36229523 | 36229466 | ID=Msa0068920-mRNA-1:exon:11556;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36230223 | 36230333 | 36230223 | ID=Msa0068920-mRNA-1:exon:11557;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36230478 | 36230528 | 36230478 | ID=Msa0068920-mRNA-1:exon:11558;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36231841 | 36231984 | 36231841 | ID=Msa0068920-mRNA-1:exon:11559;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36232062 | 36232157 | 36232062 | ID=Msa0068920-mRNA-1:exon:11560;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36232696 | 36232767 | 36232696 | ID=Msa0068920-mRNA-1:exon:11561;Parent=Msa0068920-mRNA-1 |
| chr1_2 | exon | 36234980 | 36235361 | 36234980 | ID=Msa0068920-mRNA-1:exon:11562;Parent=Msa0068920-mRNA-1 |
| chr1_2 | five_prime_UTR | 36228024 | 36228222 | 36228024 | ID=Msa0068920-mRNA-1:five_prime_utr;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36228223 | 36228303 | 36228223 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36228687 | 36228833 | 36228687 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36228935 | 36229002 | 36228935 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36229466 | 36229523 | 36229466 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36230223 | 36230333 | 36230223 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36230478 | 36230528 | 36230478 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36231841 | 36231984 | 36231841 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36232062 | 36232157 | 36232062 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36232696 | 36232767 | 36232696 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | CDS | 36234980 | 36235063 | 36234980 | ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1 |
| chr1_2 | three_prime_UTR | 36235064 | 36235361 | 36235064 | ID=Msa0068920-mRNA-1:three_prime_utr;Parent=Msa0068920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
