AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0068920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0068920 MtrunA17_Chr1g0165341 100.000 303 0 0 1 303 1 303 0.0 635
Msa0068920 MtrunA17_Chr5g0445011 59.539 304 120 3 2 303 3 305 2.28e-138 393
Msa0068920 MtrunA17_Chr8g0364041 56.954 302 129 1 2 303 6 306 4.26e-129 369
Msa0068920 MtrunA17_Chr5g0415261 55.960 302 132 1 2 303 6 306 6.27e-128 367
Msa0068920 MtrunA17_Chr8g0378521 60.440 273 107 1 2 274 8 279 7.69e-127 364
Msa0068920 MtrunA17_Chr7g0268381 59.341 273 110 1 2 274 13 284 2.97e-126 362
Msa0068920 MtrunA17_Chr1g0190121 42.652 279 157 3 15 292 25 301 1.91e-90 272
Msa0068920 MtrunA17_Chr8g0387541 41.158 311 168 6 3 300 6 314 4.01e-90 271
Msa0068920 MtrunA17_Chr1g0186811 45.627 263 140 3 15 276 25 285 5.66e-90 271
Msa0068920 MtrunA17_Chr5g0436061 42.657 286 161 3 7 291 34 317 7.36e-90 270
Msa0068920 MtrunA17_Chr7g0274931 42.294 279 158 3 15 292 25 301 4.97e-89 268
Msa0068920 MtrunA17_Chr8g0334361 43.346 263 146 3 15 276 23 283 2.21e-88 266
Msa0068920 MtrunA17_Chr7g0272371 44.643 280 147 4 3 276 10 287 5.54e-88 265
Msa0068920 MtrunA17_Chr1g0167751 44.487 263 143 3 15 276 25 285 4.21e-87 263
Msa0068920 MtrunA17_Chr3g0097231 45.106 235 125 4 40 272 216 448 9.51e-58 192
Msa0068920 MtrunA17_Chr2g0322121 36.585 287 163 7 6 276 654 937 3.23e-53 187
Msa0068920 MtrunA17_Chr2g0330331 42.460 252 136 6 28 272 65 314 4.53e-53 177
Msa0068920 MtrunA17_Chr2g0330311 43.220 236 128 6 40 272 243 475 1.05e-51 177
Msa0068920 MtrunA17_Chr4g0025471 36.029 272 159 6 19 276 672 942 4.37e-51 181
Msa0068920 MtrunA17_Chr8g0369981 34.589 292 129 12 28 259 105 394 1.53e-35 133
Msa0068920 MtrunA17_Chr1g0196211 35.393 178 106 5 100 269 4 180 5.22e-30 114
Msa0068920 MtrunA17_Chr2g0330011 47.788 113 49 4 31 134 242 353 4.45e-20 89.0
Msa0068920 MtrunA17_Chr1g0196221 45.882 85 40 1 20 98 552 636 3.99e-16 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0068920 AT1G50370.1 98.020 303 6 0 1 303 1 303 0.0 627
Msa0068920 AT3G19980.1 97.690 303 7 0 1 303 1 303 0.0 625
Msa0068920 AT4G26720.1 61.765 306 110 4 2 303 3 305 3.28e-144 408
Msa0068920 AT5G55260.1 60.197 304 118 3 2 303 3 305 1.59e-141 401
Msa0068920 AT5G55260.2 53.043 345 118 4 2 303 3 346 8.04e-133 381
Msa0068920 AT1G69960.1 56.623 302 130 1 2 303 7 307 7.71e-130 372
Msa0068920 AT1G10430.2 56.954 302 129 1 2 303 6 306 2.32e-129 370
Msa0068920 AT1G10430.1 56.954 302 129 1 2 303 6 306 2.32e-129 370
Msa0068920 AT3G58500.1 56.436 303 131 1 1 303 12 313 4.34e-129 370
Msa0068920 AT2G42500.1 56.436 303 131 1 1 303 12 313 8.17e-129 369
Msa0068920 AT1G59830.1 56.623 302 130 1 2 303 6 306 3.20e-128 368
Msa0068920 AT1G59830.2 59.504 242 98 0 2 243 6 247 2.92e-110 320
Msa0068920 AT2G42500.2 52.107 261 123 2 44 303 7 266 3.84e-97 287
Msa0068920 AT2G29400.1 44.565 276 151 2 15 290 42 315 1.19e-92 278
Msa0068920 AT2G39840.1 44.718 284 144 4 15 287 39 320 9.41e-91 273
Msa0068920 AT5G27840.1 45.714 280 144 4 3 276 14 291 3.22e-90 271
Msa0068920 AT5G27840.2 45.714 280 144 4 3 276 14 291 8.17e-90 271
Msa0068920 AT5G27840.3 45.714 280 144 4 3 276 14 291 8.17e-90 271
Msa0068920 AT5G27840.4 45.714 280 144 4 3 276 14 291 8.39e-90 271
Msa0068920 AT4G11240.1 42.230 296 163 5 10 300 22 314 1.91e-89 270
Msa0068920 AT5G43380.1 42.321 293 161 4 15 301 25 315 5.31e-89 269
Msa0068920 AT5G43380.2 42.321 293 161 4 15 301 25 315 8.16e-89 268
Msa0068920 AT5G43380.3 42.321 293 161 4 15 301 25 315 8.28e-89 268
Msa0068920 AT5G59160.3 45.038 262 141 3 16 276 36 295 9.95e-89 268
Msa0068920 AT5G59160.2 45.038 262 141 3 16 276 36 295 9.95e-89 268
Msa0068920 AT5G59160.1 45.038 262 141 3 16 276 36 295 9.95e-89 268
Msa0068920 AT3G46820.1 44.928 276 148 4 3 276 22 295 1.11e-88 267
Msa0068920 AT1G64040.1 41.581 291 163 4 15 300 26 314 1.05e-87 265
Msa0068920 AT3G05580.1 44.286 280 148 4 3 276 14 291 4.54e-87 263
Msa0068920 AT3G05580.2 45.833 240 123 3 3 236 14 252 4.35e-77 236
Msa0068920 AT2G42500.4 59.877 162 62 1 1 159 12 173 2.13e-66 206
Msa0068920 AT2G42500.5 60.119 168 62 2 1 165 12 177 2.25e-66 206
Msa0068920 AT2G42500.3 62.338 154 55 1 1 151 12 165 5.91e-66 204
Msa0068920 AT2G42810.1 44.255 235 127 4 40 272 218 450 1.49e-59 197
Msa0068920 AT2G42810.5 44.255 235 127 4 40 272 218 450 1.49e-59 197
Msa0068920 AT2G42810.4 44.255 235 127 4 40 272 218 450 1.49e-59 197
Msa0068920 AT2G42810.3 44.255 235 127 4 40 272 271 503 5.94e-59 197
Msa0068920 AT2G42810.2 44.255 235 127 4 40 272 272 504 6.73e-59 197
Msa0068920 AT1G03445.2 39.706 272 146 8 20 276 480 748 9.49e-56 193
Msa0068920 AT1G03445.1 39.706 272 146 8 20 276 480 748 1.06e-55 192
Msa0068920 AT4G03080.1 38.376 271 152 6 20 276 554 823 3.44e-54 189
Msa0068920 AT2G27210.2 35.315 286 168 7 6 276 660 943 5.54e-50 178
Msa0068920 AT2G27210.1 35.315 286 168 7 6 276 665 948 6.33e-50 177
Msa0068920 AT1G08420.2 34.965 286 169 7 6 276 671 954 3.02e-49 176
Msa0068920 AT1G08420.1 34.965 286 169 7 6 276 676 959 3.07e-49 176
Msa0068920 AT5G63870.1 35.075 268 121 9 43 259 77 342 1.14e-31 122
Msa0068920 AT5G63870.2 35.075 268 121 9 43 259 77 342 1.14e-31 122
Msa0068920 AT1G48120.1 32.226 301 140 9 19 259 629 925 2.73e-30 121
Msa0068920 AT5G63870.3 37.500 216 96 7 43 221 77 290 9.71e-29 112
Msa0068920 AT5G10900.3 31.646 237 135 7 24 235 199 433 5.91e-24 102
Msa0068920 AT5G10900.2 31.646 237 135 7 24 235 199 433 6.33e-24 102
Msa0068920 AT5G10900.1 31.646 237 135 7 24 235 199 433 6.43e-24 102

Find 76 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCCATATTTCTTATAATT+TGG 0.153299 1_2:+36235046 Msa0068920:exon
TCCTCCTTCTCCTCTTGTTT+TGG 0.161284 1_2:+36228129 Msa0068920:five_prime_UTR
AAACTAGAATGTTCAATATT+TGG 0.194606 1_2:-36235217 None:intergenic
TTGTAAAATTATGCAGTAAA+TGG 0.198566 1_2:+36235089 Msa0068920:three_prime_UTR
TCTTAGTTTCAATGAAAATA+TGG 0.227077 1_2:+36232746 Msa0068920:CDS
CCACAACGGTAACAATAATT+AGG 0.237846 1_2:-36232708 None:intergenic
GTGTGAGTTGTCTACTTTCA+TGG 0.258082 1_2:-36229499 None:intergenic
TCGCCAAATTATAAGAAATA+TGG 0.270446 1_2:-36235049 None:intergenic
ACACTTTCTGCAATTATAGA+TGG 0.279913 1_2:+36230307 Msa0068920:CDS
TTTCATGGTTTCCACGTAGA+AGG 0.307041 1_2:-36229484 None:intergenic
AAATGGCTTTCTATTATGAT+TGG 0.333907 1_2:+36235106 Msa0068920:three_prime_UTR
GATGAATGCCAGAGAAAGTA+TGG 0.349004 1_2:+36230238 Msa0068920:CDS
ATGTCACCACAAACAGTTAC+TGG 0.360532 1_2:-36228735 None:intergenic
ACCCAGGTGCTTTGTGTTCA+CGG 0.361024 1_2:+36230472 Msa0068920:intron
TAGCATTTCCATACTTTCTC+TGG 0.362451 1_2:-36230246 None:intergenic
AAGTACATGTTCCAAGATAA+AGG 0.383237 1_2:+36232125 Msa0068920:CDS
CAGTTACAAGGCCTTTATCT+TGG 0.389398 1_2:-36232136 None:intergenic
TGGTCAATTGTTCTGATGTC+TGG 0.394556 1_2:-36230505 None:intergenic
GCCCATGTTTCAATATCTTC+AGG 0.398413 1_2:-36231910 None:intergenic
CGGGCACGTGCCCACCGGTC+TGG 0.402939 1_2:-36228791 None:intergenic
CGTAGAAGGGTTATATTAGC+AGG 0.427554 1_2:-36229470 None:intergenic
TCTCTTCTCTTCTCTTCCCT+CGG 0.428935 1_2:-36228171 None:intergenic
CTCCACATAAGATCACAAAA+TGG 0.447030 1_2:-36231883 None:intergenic
AATAGTTGTTAGCAGTAGAA+AGG 0.458856 1_2:+36228072 Msa0068920:five_prime_UTR
GGTTAAAGAGATCTTAATTG+AGG 0.467806 1_2:+36228686 Msa0068920:intron
CTTTAACCTTCGAGATCCAT+TGG 0.482031 1_2:-36228234 None:intergenic
ACTGTTTGTGGTGACATTCA+TGG 0.492582 1_2:+36228741 Msa0068920:CDS
CCTAATTATTGTTACCGTTG+TGG 0.493473 1_2:+36232708 Msa0068920:CDS
GCAGTCAGTCCACGTGGAGC+TGG 0.503063 1_2:+36231931 Msa0068920:CDS
TTCAGATGCTTACAGTTACA+AGG 0.508425 1_2:-36232148 None:intergenic
CGGATCCCGGGTTACATCTG+AGG 0.510087 1_2:+36231963 Msa0068920:CDS
AAATATGGAACACCTGTCCT+AGG 0.510145 1_2:-36235034 None:intergenic
ACCTAGCTTTAAGAAGCAAA+AGG 0.522956 1_2:-36228982 None:intergenic
TTCATGGTTTCCACGTAGAA+GGG 0.527118 1_2:-36229483 None:intergenic
AGTCTCGGGCACGTGCCCAC+CGG 0.531838 1_2:-36228796 None:intergenic
CTAGAATGTTCAATATTTGG+TGG 0.536035 1_2:-36235214 None:intergenic
AATAGTCCAGTAACTGTTTG+TGG 0.542664 1_2:+36228729 Msa0068920:CDS
ACAATCAGATGAGAGGGCCT+AGG 0.546455 1_2:+36235017 Msa0068920:CDS
ATACCCAAAACAAGAGGAGA+AGG 0.551498 1_2:-36228133 None:intergenic
TTGTTCTGATGTCTGGAGAA+AGG 0.553674 1_2:-36230498 None:intergenic
CAGATGAGAGGGCCTAGGAC+AGG 0.555018 1_2:+36235022 Msa0068920:CDS
ACAGTTACTGGACTATTCAC+AGG 0.560124 1_2:-36228723 None:intergenic
TCAGTCCACGTGGAGCTGGT+TGG 0.561248 1_2:+36231935 Msa0068920:CDS
AGTATGGAAATGCTAATGCT+TGG 0.570861 1_2:+36230254 Msa0068920:CDS
AGGAGAACAATCAGATGAGA+GGG 0.574421 1_2:+36235011 Msa0068920:CDS
TTATGTTAAAATAGCTAGCA+AGG 0.576226 1_2:+36228018 None:intergenic
GTTCGTCTTCGAGAAGATGT+TGG 0.585150 1_2:-36228261 None:intergenic
TGGATCTCGAAGGTTAAAGA+TGG 0.588605 1_2:+36228238 Msa0068920:CDS
TCCTGAAGATATTGAAACAT+GGG 0.588789 1_2:+36231909 Msa0068920:CDS
CCCAAAACAAGAGGAGAAGG+AGG 0.595308 1_2:-36228130 None:intergenic
GAGGAGAACAATCAGATGAG+AGG 0.609057 1_2:+36235010 Msa0068920:CDS
GAGATATGGATTTGGACCAA+TGG 0.609365 1_2:+36228218 Msa0068920:exon
GCACATCAACTTGTACAAGA+AGG 0.609781 1_2:+36232098 Msa0068920:CDS
TCACAAAATGGCCCCTCGTG+AGG 0.613649 1_2:-36231871 None:intergenic
TAGGGTGACTTTGTTGATCG+CGG 0.614888 1_2:+36228932 Msa0068920:intron
GTTGATGTGCTCGACAAACA+AGG 0.619450 1_2:-36232085 None:intergenic
ATCCTGAAGATATTGAAACA+TGG 0.620272 1_2:+36231908 Msa0068920:CDS
ACATTACCTCAGATGTAACC+CGG 0.622692 1_2:-36231969 None:intergenic
GAACTGTGAAATTCCTCACG+AGG 0.623314 1_2:+36231858 Msa0068920:CDS
AGCTTTAAGAAGCAAAAGGA+TGG 0.627769 1_2:-36228978 None:intergenic
GTGCTCGACAAACAAGGTCA+AGG 0.639424 1_2:-36232079 None:intergenic
AACTGTGAAATTCCTCACGA+GGG 0.643578 1_2:+36231859 Msa0068920:CDS
GTAGAAGGGTTATATTAGCA+GGG 0.645634 1_2:-36229469 None:intergenic
TTTGGACCAATGGATCTCGA+AGG 0.650316 1_2:+36228228 Msa0068920:CDS
GACAGATAAGAGTCATTGAG+CGG 0.664068 1_2:+36231836 Msa0068920:intron
CATTACCTCAGATGTAACCC+GGG 0.673485 1_2:-36231968 None:intergenic
AGACATCAGAACAATTGACC+AGG 0.675885 1_2:+36230507 Msa0068920:CDS
TGTAAGATAGTCGAAAACAT+CGG 0.682696 1_2:-36230287 None:intergenic
ACATGGGCAGTCAGTCCACG+TGG 0.685712 1_2:+36231925 Msa0068920:CDS
ACTGTGAAATTCCTCACGAG+GGG 0.691236 1_2:+36231860 Msa0068920:CDS
ACAGTGTTAGTCATGTATTG+TGG 0.694157 1_2:+36235129 Msa0068920:three_prime_UTR
TGAAAGTAGACAACTCACAC+AGG 0.696061 1_2:+36229502 Msa0068920:CDS
GCTAATATAACCCTTCTACG+TGG 0.714294 1_2:+36229473 Msa0068920:CDS
TAGAAGCTACATTTCCACAA+CGG 0.718445 1_2:-36232722 None:intergenic
AAAAGCCAACCAGCTCCACG+TGG 0.718658 1_2:-36231940 None:intergenic
CAGGTGCTTTGTGTTCACGG+TGG 0.738287 1_2:+36230475 Msa0068920:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTATAATAAACTATATTT+CGG - chr1_2:36229194-36229213 None:intergenic 10.0%
!!! CTTTATTTGTTAAAATAAAT+TGG + chr1_2:36229801-36229820 Msa0068920:intron 10.0%
!!! CAATAACTTTTTTTTTTTTT+TGG + chr1_2:36231613-36231632 Msa0068920:intron 10.0%
!!! TACTTTTTAAGTATATTTTA+AGG + chr1_2:36232789-36232808 Msa0068920:intron 10.0%
!! AAAAATACTAAAACAAAAAT+AGG - chr1_2:36235188-36235207 None:intergenic 10.0%
!! TATTATCATTATTATCGTTA+GGG + chr1_2:36228517-36228536 Msa0068920:intron 15.0%
!! ATTATTATTATGAATGTTTC+AGG + chr1_2:36228665-36228684 Msa0068920:intron 15.0%
!! TAGTTTATTATAGAACATTA+CGG + chr1_2:36229199-36229218 Msa0068920:intron 15.0%
!!! ATATGTATCTTTTCAATAAA+AGG + chr1_2:36230060-36230079 Msa0068920:intron 15.0%
!! ATTAATTTATTTATCCAAAC+AGG - chr1_2:36230603-36230622 None:intergenic 15.0%
!!! TTTATTTTATCTTAGAGTTT+TGG - chr1_2:36230686-36230705 None:intergenic 15.0%
!!! TTTTGCTTAATTTTAAAACA+AGG - chr1_2:36230949-36230968 None:intergenic 15.0%
!!! TTGATTCTTACTTTTTAAAA+AGG + chr1_2:36231769-36231788 Msa0068920:intron 15.0%
!!! TCAATATTTTCAAATAAAAC+TGG - chr1_2:36232645-36232664 None:intergenic 15.0%
!!! AGTTTTATTTGAAAATATTG+AGG + chr1_2:36232644-36232663 Msa0068920:intron 15.0%
!! AAAAATCAATAAAATTGCAA+AGG + chr1_2:36233469-36233488 Msa0068920:intron 15.0%
!!! AAAATATTAGTCTATTAATG+AGG + chr1_2:36233579-36233598 Msa0068920:intron 15.0%
!!! ACTATTTATTTTCTGTTTTT+AGG - chr1_2:36234052-36234071 None:intergenic 15.0%
!! TAAAAACAGAAAATAAATAG+TGG + chr1_2:36234051-36234070 Msa0068920:intron 15.0%
!! AAAAACAGAAAATAAATAGT+GGG + chr1_2:36234052-36234071 Msa0068920:intron 15.0%
!! TTATTGAGTAAAATTTATGT+AGG - chr1_2:36234424-36234443 None:intergenic 15.0%
!!! ATTTATTTGATTTGATCTTA+AGG + chr1_2:36234757-36234776 Msa0068920:intron 15.0%
!! CTATTATCATTATTATCGTT+AGG + chr1_2:36228516-36228535 Msa0068920:intron 20.0%
!!! ATAAAAATGTAATTAGTCTC+GGG - chr1_2:36228813-36228832 None:intergenic 20.0%
!!! CATAAAAATGTAATTAGTCT+CGG - chr1_2:36228814-36228833 None:intergenic 20.0%
!! TATGTTATGTTATGTATTGT+TGG + chr1_2:36228848-36228867 Msa0068920:intron 20.0%
!! TTTGTGACTTTCTAATTTAT+TGG + chr1_2:36229077-36229096 Msa0068920:intron 20.0%
!! TGATTTAGAAATTAATGAGT+TGG + chr1_2:36229167-36229186 Msa0068920:intron 20.0%
!!! ATAATTGATTCAGTAATGTA+AGG + chr1_2:36229839-36229858 Msa0068920:intron 20.0%
!! GTAAGAAATGTCTAAATTTA+TGG + chr1_2:36229908-36229927 Msa0068920:intron 20.0%
!! TACACAAAATTAACATCAAT+TGG - chr1_2:36230187-36230206 None:intergenic 20.0%
!! GTAAGAAATAATAAACGAAA+GGG - chr1_2:36231370-36231389 None:intergenic 20.0%
!! TAAAGTGAAAAGTAAAAACA+GGG - chr1_2:36231410-36231429 None:intergenic 20.0%
!! ATAAAGTGAAAAGTAAAAAC+AGG - chr1_2:36231411-36231430 None:intergenic 20.0%
!!! AATAGTCCAATTAATGATTT+TGG + chr1_2:36232277-36232296 Msa0068920:intron 20.0%
!!! ATAGTCCAATTAATGATTTT+GGG + chr1_2:36232278-36232297 Msa0068920:intron 20.0%
!! TGAAAATATTGAGGTAAAAA+AGG + chr1_2:36232653-36232672 Msa0068920:intron 20.0%
!!! GGTATTTTTTTTAAATTTGC+AGG + chr1_2:36232674-36232693 Msa0068920:intron 20.0%
!!! TTTTTTTAAATTTGCAGGTA+TGG + chr1_2:36232679-36232698 Msa0068920:intron 20.0%
!! TCTTAGTTTCAATGAAAATA+TGG + chr1_2:36232746-36232765 Msa0068920:CDS 20.0%
!! TCTTGATTTATTTAACATGA+AGG - chr1_2:36232947-36232966 None:intergenic 20.0%
!!! TTATATTTGTTGGAATTAAG+AGG + chr1_2:36232996-36233015 Msa0068920:intron 20.0%
!! AGGAATATATAAACTAAAGT+AGG + chr1_2:36233715-36233734 Msa0068920:intron 20.0%
!! TGACTATCAACATTATTATT+TGG + chr1_2:36234258-36234277 Msa0068920:intron 20.0%
!!! TATTATTTGGTTTGCATTTT+TGG + chr1_2:36234271-36234290 Msa0068920:intron 20.0%
!!! CTTTATTTAACTATTGGATA+TGG - chr1_2:36234545-36234564 None:intergenic 20.0%
!!! TAGTGACTTTATTTAACTAT+TGG - chr1_2:36234551-36234570 None:intergenic 20.0%
!! AGTCACTAAATAAAATTGAA+AGG + chr1_2:36234563-36234582 Msa0068920:intron 20.0%
!! GTCACTAAATAAAATTGAAA+GGG + chr1_2:36234564-36234583 Msa0068920:intron 20.0%
!! TCACTAAATAAAATTGAAAG+GGG + chr1_2:36234565-36234584 Msa0068920:intron 20.0%
!!! TTGAACTAATTTGCAATTTT+TGG + chr1_2:36234628-36234647 Msa0068920:intron 20.0%
!! ATCAAATCAAATAAATAGCA+GGG - chr1_2:36234753-36234772 None:intergenic 20.0%
!! GTTCCATATTTCTTATAATT+TGG + chr1_2:36235046-36235065 Msa0068920:exon 20.0%
!! TTGTAAAATTATGCAGTAAA+TGG + chr1_2:36235089-36235108 Msa0068920:three_prime_UTR 20.0%
!! AAACTAGAATGTTCAATATT+TGG - chr1_2:36235220-36235239 None:intergenic 20.0%
!!! TGTGAATTATTTTTGTTGAC+TGG + chr1_2:36228043-36228062 Msa0068920:five_prime_UTR 25.0%
!!! AATTATTTTTGTTGACTGGA+GGG + chr1_2:36228047-36228066 Msa0068920:five_prime_UTR 25.0%
! ACAAAACAAAAAGTGAGATA+TGG + chr1_2:36228204-36228223 Msa0068920:exon 25.0%
!! CGAGACTAATTACATTTTTA+TGG + chr1_2:36228812-36228831 Msa0068920:CDS 25.0%
!!! TGTGTTGATTAATGTGTTTT+AGG + chr1_2:36228913-36228932 Msa0068920:intron 25.0%
!!! GTGTTGATTAATGTGTTTTA+GGG + chr1_2:36228914-36228933 Msa0068920:intron 25.0%
!! ACCACACAGATAATAATTTT+AGG + chr1_2:36229142-36229161 Msa0068920:intron 25.0%
! TCCTAAAATTATTATCTGTG+TGG - chr1_2:36229146-36229165 None:intergenic 25.0%
! ATCTTGAATGTTAGAGTTAT+TGG + chr1_2:36229382-36229401 Msa0068920:intron 25.0%
! TCTTGAATGTTAGAGTTATT+GGG + chr1_2:36229383-36229402 Msa0068920:intron 25.0%
! CTGCTTAAAATGTTAACTTA+AGG - chr1_2:36229576-36229595 None:intergenic 25.0%
!! TTAACATTTTAAGCAGAACA+TGG + chr1_2:36229580-36229599 Msa0068920:intron 25.0%
!! TAACATTTTAAGCAGAACAT+GGG + chr1_2:36229581-36229600 Msa0068920:intron 25.0%
!!! GCTAATGATGTTTTGTTTTT+GGG + chr1_2:36229702-36229721 Msa0068920:intron 25.0%
!!! CTAATGATGTTTTGTTTTTG+GGG + chr1_2:36229703-36229722 Msa0068920:intron 25.0%
!!! TAATGATGTTTTGTTTTTGG+GGG + chr1_2:36229704-36229723 Msa0068920:intron 25.0%
! TAACTGCGATATAAACTAAT+AGG + chr1_2:36229777-36229796 Msa0068920:intron 25.0%
!! CTTAGATGATAGTTTTTGAA+AGG + chr1_2:36229954-36229973 Msa0068920:intron 25.0%
! CATGTTAAAAGAACTAAAAG+TGG - chr1_2:36230089-36230108 None:intergenic 25.0%
! TTCTAATGGCATTTCAAAAA+GGG - chr1_2:36230144-36230163 None:intergenic 25.0%
! TTTCTAATGGCATTTCAAAA+AGG - chr1_2:36230145-36230164 None:intergenic 25.0%
! TTCTCATCTCTAATTTCTAA+TGG - chr1_2:36230158-36230177 None:intergenic 25.0%
!! TGTGTATTTAATATTTTGCC+AGG + chr1_2:36230201-36230220 Msa0068920:intron 25.0%
! TGTATCTGTGTATTATACTA+TGG + chr1_2:36230576-36230595 Msa0068920:intron 25.0%
! AAACATTTGCAAGATTGTTT+AGG - chr1_2:36230810-36230829 None:intergenic 25.0%
! TCAAATAAGCTAATCCAAAT+AGG + chr1_2:36230846-36230865 Msa0068920:intron 25.0%
! ATTAACATGTTGTGGTAAAA+GGG - chr1_2:36231090-36231109 None:intergenic 25.0%
! TATTAACATGTTGTGGTAAA+AGG - chr1_2:36231091-36231110 None:intergenic 25.0%
! CTAGAATAAAGTAAGGAAAA+AGG - chr1_2:36231119-36231138 None:intergenic 25.0%
!! CTTTTTCCTTACTTTATTCT+AGG + chr1_2:36231117-36231136 Msa0068920:intron 25.0%
! TGATTTCCTAGAATAAAGTA+AGG - chr1_2:36231126-36231145 None:intergenic 25.0%
! CGTAAGAAATAATAAACGAA+AGG - chr1_2:36231371-36231390 None:intergenic 25.0%
!!! TTTGGTTTGACAAAAAAGAA+TGG - chr1_2:36231503-36231522 None:intergenic 25.0%
! AAACTGATATCTTATTGTAG+TGG - chr1_2:36231703-36231722 None:intergenic 25.0%
!!! GATTAATTTTTTTGACCAAC+TGG + chr1_2:36232199-36232218 Msa0068920:intron 25.0%
!! TAGTCCAATTAATGATTTTG+GGG + chr1_2:36232279-36232298 Msa0068920:intron 25.0%
! TCTTTATGGGATAAAATTGA+GGG - chr1_2:36232472-36232491 None:intergenic 25.0%
! ATCTTTATGGGATAAAATTG+AGG - chr1_2:36232473-36232492 None:intergenic 25.0%
! ATGAGATATGCAAAAAACAA+AGG - chr1_2:36232859-36232878 None:intergenic 25.0%
!!! TTTGTTTTTTGCATATCTCA+TGG + chr1_2:36232858-36232877 Msa0068920:intron 25.0%
!!! TTGTTTTTTGCATATCTCAT+GGG + chr1_2:36232859-36232878 Msa0068920:intron 25.0%
! CATACAAGAAGAAATACTAT+TGG - chr1_2:36232923-36232942 None:intergenic 25.0%
! TTAAATAAATCAAGAGACAC+AGG + chr1_2:36232952-36232971 Msa0068920:intron 25.0%
! CTCTTTACTCTTATATTTGT+TGG + chr1_2:36232986-36233005 Msa0068920:intron 25.0%
! CAAAACAATGACTTATTTGA+GGG + chr1_2:36233053-36233072 Msa0068920:intron 25.0%
!! TTCTTCGTAGTTTAAAATGA+CGG + chr1_2:36233230-36233249 Msa0068920:intron 25.0%
!! AGAGGATTTTCTTATGAAAT+TGG + chr1_2:36233264-36233283 Msa0068920:intron 25.0%
! TTATGAAATTGGATGTTCAA+AGG + chr1_2:36233275-36233294 Msa0068920:intron 25.0%
! TATGAAATTGGATGTTCAAA+GGG + chr1_2:36233276-36233295 Msa0068920:intron 25.0%
!!! AATTTTAGGAATCAGATGTA+AGG + chr1_2:36233525-36233544 Msa0068920:intron 25.0%
! AAATGAGATGTAGATGTAAA+TGG + chr1_2:36233548-36233567 Msa0068920:intron 25.0%
!! ATATTAGTCTATTAATGAGG+AGG + chr1_2:36233582-36233601 Msa0068920:intron 25.0%
!!! TTGTTGAATAAAAGGTGTTT+AGG + chr1_2:36233695-36233714 Msa0068920:intron 25.0%
!! TTTTCCTAAATCTAATAGCA+AGG + chr1_2:36233836-36233855 Msa0068920:intron 25.0%
! TAGAATGACTGAAATAAAGA+TGG + chr1_2:36233882-36233901 Msa0068920:intron 25.0%
!!! ATAAAGATGGCTATTTTAGT+AGG + chr1_2:36233895-36233914 Msa0068920:intron 25.0%
!! TTTAGTAGGATAGGATTTTT+AGG + chr1_2:36233909-36233928 Msa0068920:intron 25.0%
!! ATCAAATGTAGTCAAGATTT+TGG + chr1_2:36234076-36234095 Msa0068920:intron 25.0%
!! TCAAATGTAGTCAAGATTTT+GGG + chr1_2:36234077-36234096 Msa0068920:intron 25.0%
! CAATTGTGTAAATAAATCGA+GGG - chr1_2:36234236-36234255 None:intergenic 25.0%
! ACAATTGTGTAAATAAATCG+AGG - chr1_2:36234237-36234256 None:intergenic 25.0%
!! AACTAAGAGTATATAGAGTT+CGG - chr1_2:36234299-36234318 None:intergenic 25.0%
!! GAGTGTTAAAAAGTGTATAT+AGG - chr1_2:36234333-36234352 None:intergenic 25.0%
! CACTAAATAAAATTGAAAGG+GGG + chr1_2:36234566-36234585 Msa0068920:intron 25.0%
!!! TAATTTGCAATTTTTGGTGT+TGG + chr1_2:36234634-36234653 Msa0068920:intron 25.0%
! GATCAAATCAAATAAATAGC+AGG - chr1_2:36234754-36234773 None:intergenic 25.0%
!!! TATTTGATTTGATCTTAAGG+TGG + chr1_2:36234760-36234779 Msa0068920:intron 25.0%
! ACAAAGCAGTAAATTTCATT+AGG - chr1_2:36234803-36234822 None:intergenic 25.0%
!! TTTGTAAACTTGGATTTTGA+TGG + chr1_2:36234892-36234911 Msa0068920:intron 25.0%
! TCGCCAAATTATAAGAAATA+TGG - chr1_2:36235052-36235071 None:intergenic 25.0%
! AAATGGCTTTCTATTATGAT+TGG + chr1_2:36235106-36235125 Msa0068920:three_prime_UTR 25.0%
!!! CAAATGCATTGTTTTTTCTT+AGG + chr1_2:36235157-36235176 Msa0068920:three_prime_UTR 25.0%
!!! GAATTATTTTTGTTGACTGG+AGG + chr1_2:36228046-36228065 Msa0068920:five_prime_UTR 30.0%
AATAGTTGTTAGCAGTAGAA+AGG + chr1_2:36228072-36228091 Msa0068920:five_prime_UTR 30.0%
ACAAAAATACCCAAAACAAG+AGG - chr1_2:36228142-36228161 None:intergenic 30.0%
CAAAAAGTGAGATATGGATT+TGG + chr1_2:36228210-36228229 Msa0068920:exon 30.0%
GGTTAAAGAGATCTTAATTG+AGG + chr1_2:36228686-36228705 Msa0068920:intron 30.0%
ATGTTATGTATTGTTGGATC+TGG + chr1_2:36228854-36228873 Msa0068920:intron 30.0%
TGTTATGTATTGTTGGATCT+GGG + chr1_2:36228855-36228874 Msa0068920:intron 30.0%
TGTGACTTTGAGTAATATTG+CGG + chr1_2:36229042-36229061 Msa0068920:intron 30.0%
AAAGTCACAAAACTACAAAG+TGG - chr1_2:36229068-36229087 None:intergenic 30.0%
AGGTATGTGTTTAATGTACT+TGG + chr1_2:36229522-36229541 Msa0068920:intron 30.0%
AGAACATGGGAAGTTATTAA+AGG + chr1_2:36229594-36229613 Msa0068920:intron 30.0%
CAATACACAATTGACAATGT+TGG - chr1_2:36229646-36229665 None:intergenic 30.0%
!!! GGCTAATGATGTTTTGTTTT+TGG + chr1_2:36229701-36229720 Msa0068920:intron 30.0%
!!! AATGATGTTTTGTTTTTGGG+GGG + chr1_2:36229705-36229724 Msa0068920:intron 30.0%
CAATATTGCAATATTGCACA+TGG + chr1_2:36230111-36230130 Msa0068920:intron 30.0%
! TTAATATTTTGCCAGGTCTA+TGG + chr1_2:36230208-36230227 Msa0068920:intron 30.0%
TGTAAGATAGTCGAAAACAT+CGG - chr1_2:36230290-36230309 None:intergenic 30.0%
ACACTTTCTGCAATTATAGA+TGG + chr1_2:36230307-36230326 Msa0068920:CDS 30.0%
TATTATACTATGGTCCTGTT+TGG + chr1_2:36230586-36230605 Msa0068920:intron 30.0%
ACAATAAGTGCTTGTGTTAT+AGG - chr1_2:36230632-36230651 None:intergenic 30.0%
! ACTGTTTTCATTAGCTATCT+TGG + chr1_2:36230733-36230752 Msa0068920:intron 30.0%
TAGCTATCTTGGAGAATTTA+TGG + chr1_2:36230744-36230763 Msa0068920:intron 30.0%
AGTTATTCCAAATGCACTTA+GGG - chr1_2:36230872-36230891 None:intergenic 30.0%
AAGTTATTCCAAATGCACTT+AGG - chr1_2:36230873-36230892 None:intergenic 30.0%
!! GGACAGCTTTTGAAAATTAT+GGG - chr1_2:36230928-36230947 None:intergenic 30.0%
!! AGGACAGCTTTTGAAAATTA+TGG - chr1_2:36230929-36230948 None:intergenic 30.0%
CGTTATTATACATTGCAAGT+TGG - chr1_2:36230988-36231007 None:intergenic 30.0%
GGAGAAATATTAACATGTTG+TGG - chr1_2:36231098-36231117 None:intergenic 30.0%
! TTTATTCTAGGAAATCAGAG+AGG + chr1_2:36231129-36231148 Msa0068920:intron 30.0%
TTGAAAACATGTGTTCGTTT+AGG + chr1_2:36231174-36231193 Msa0068920:intron 30.0%
TGAAAACATGTGTTCGTTTA+GGG + chr1_2:36231175-36231194 Msa0068920:intron 30.0%
CCTATACAGATCTTAATATC+AGG - chr1_2:36231436-36231455 None:intergenic 30.0%
CCTGATATTAAGATCTGTAT+AGG + chr1_2:36231433-36231452 Msa0068920:intron 30.0%
AGATCTGTATAGGAATAATC+AGG + chr1_2:36231443-36231462 Msa0068920:intron 30.0%
GATCTGTATAGGAATAATCA+GGG + chr1_2:36231444-36231463 Msa0068920:intron 30.0%
!!! CTTTTTTGTCAAACCAAAAC+AGG + chr1_2:36231505-36231524 Msa0068920:intron 30.0%
!! TTCATTTTGCTGTACTTGTT+TGG + chr1_2:36231572-36231591 Msa0068920:intron 30.0%
ATCCTGAAGATATTGAAACA+TGG + chr1_2:36231908-36231927 Msa0068920:CDS 30.0%
TCCTGAAGATATTGAAACAT+GGG + chr1_2:36231909-36231928 Msa0068920:CDS 30.0%
! ATTGAATTGAGCTTTATGTG+TGG + chr1_2:36232011-36232030 Msa0068920:intron 30.0%
! TTGAATTGAGCTTTATGTGT+GGG + chr1_2:36232012-36232031 Msa0068920:intron 30.0%
GATTAAACTGCATGAAAAGA+AGG - chr1_2:36232049-36232068 None:intergenic 30.0%
AAGTACATGTTCCAAGATAA+AGG + chr1_2:36232125-36232144 Msa0068920:CDS 30.0%
! CTATAGTCTTTTCAAATGAC+CGG - chr1_2:36232243-36232262 None:intergenic 30.0%
! AGTCCAATTAATGATTTTGG+GGG + chr1_2:36232280-36232299 Msa0068920:intron 30.0%
! TTTTATCCCATAAAGATCCA+AGG + chr1_2:36232476-36232495 Msa0068920:intron 30.0%
TTTATCCCATAAAGATCCAA+GGG + chr1_2:36232477-36232496 Msa0068920:intron 30.0%
!! CATCTAAATGGATTAGTCAA+TGG - chr1_2:36232559-36232578 None:intergenic 30.0%
! CATTGACTAATCCATTTAGA+TGG + chr1_2:36232557-36232576 Msa0068920:intron 30.0%
GCAAAACAATGACTTATTTG+AGG + chr1_2:36233052-36233071 Msa0068920:intron 30.0%
TCAGATTGTCAGTTACATAT+GGG + chr1_2:36233123-36233142 Msa0068920:intron 30.0%
ACCAATATATATCATGTACC+CGG + chr1_2:36233177-36233196 Msa0068920:intron 30.0%
GGTATTAGGGATGAAAATAA+CGG + chr1_2:36233300-36233319 Msa0068920:intron 30.0%
GTATTAGGGATGAAAATAAC+GGG + chr1_2:36233301-36233320 Msa0068920:intron 30.0%
! ATGAAAATAACGGGACAATA+TGG + chr1_2:36233310-36233329 Msa0068920:intron 30.0%
ATATATCATGATATGTCCTG+AGG + chr1_2:36233389-36233408 Msa0068920:intron 30.0%
! AGATGCGCTATTGAAATTTT+AGG + chr1_2:36233511-36233530 Msa0068920:intron 30.0%
GACCAAAGTTGTTGAATAAA+AGG + chr1_2:36233687-36233706 Msa0068920:intron 30.0%
! CACCTTTTATTCAACAACTT+TGG - chr1_2:36233692-36233711 None:intergenic 30.0%
TTTAGGAAAATCTGATCACT+GGG - chr1_2:36233826-36233845 None:intergenic 30.0%
ATTTAGGAAAATCTGATCAC+TGG - chr1_2:36233827-36233846 None:intergenic 30.0%
!! AGATCCTTGCTATTAGATTT+AGG - chr1_2:36233843-36233862 None:intergenic 30.0%
TCTAATAGCAAGGATCTATT+TGG + chr1_2:36233846-36233865 Msa0068920:intron 30.0%
GGATAGATCGAAGATTAAAT+AGG + chr1_2:36234015-36234034 Msa0068920:intron 30.0%
! CAAATGTAGTCAAGATTTTG+GGG + chr1_2:36234078-36234097 Msa0068920:intron 30.0%
TGTGAAAATGCGTGAAAAAT+TGG + chr1_2:36234139-36234158 Msa0068920:intron 30.0%
TTTACTCAATAAGAGAGTGA+AGG + chr1_2:36234432-36234451 Msa0068920:intron 30.0%
TTGTAGTGAAGGATCTAAAT+AGG - chr1_2:36234498-36234517 None:intergenic 30.0%
TTGTGTGTTGAAACATTTGT+CGG + chr1_2:36234834-36234853 Msa0068920:intron 30.0%
ACATGTGATCTTTGTAAACT+TGG + chr1_2:36234882-36234901 Msa0068920:intron 30.0%
! CTTATATGTTCCTAGCATTT+TGG + chr1_2:36234926-36234945 Msa0068920:intron 30.0%
TGTTACAAGAAAACATCCAA+GGG - chr1_2:36234959-36234978 None:intergenic 30.0%
! TAAGTTTTTCACTGAAACAG+AGG + chr1_2:36234991-36235010 Msa0068920:CDS 30.0%
CTAGAATGTTCAATATTTGG+TGG - chr1_2:36235217-36235236 None:intergenic 30.0%
!!! TTTTGTCATTTTTCATCGTG+AGG - chr1_2:36235288-36235307 None:intergenic 30.0%
!! ATTATCGTTAGGGCTTTGTT+TGG + chr1_2:36228527-36228546 Msa0068920:intron 35.0%
AATAGTCCAGTAACTGTTTG+TGG + chr1_2:36228729-36228748 Msa0068920:CDS 35.0%
! CTAATGAAACTTTTCCAGAC+CGG + chr1_2:36228777-36228796 Msa0068920:CDS 35.0%
!! AGCTTTAAGAAGCAAAAGGA+TGG - chr1_2:36228981-36229000 None:intergenic 35.0%
! TCCTTTTGCTTCTTAAAGCT+AGG + chr1_2:36228981-36229000 Msa0068920:CDS 35.0%
!! ACCTAGCTTTAAGAAGCAAA+AGG - chr1_2:36228985-36229004 None:intergenic 35.0%
TCTAATTTATTGGTCGTGCT+TGG + chr1_2:36229087-36229106 Msa0068920:intron 35.0%
TTGTATATGTGTCTGTGTCT+GGG - chr1_2:36229121-36229140 None:intergenic 35.0%
!! CTTCTTTGTTGTTGTTGTTG+TGG + chr1_2:36229269-36229288 Msa0068920:intron 35.0%
GTAGAAGGGTTATATTAGCA+GGG - chr1_2:36229472-36229491 None:intergenic 35.0%
TGTGTATTGCAAAAAGTAGC+AGG + chr1_2:36229657-36229676 Msa0068920:intron 35.0%
CATCATAAAATCCATAGACC+TGG - chr1_2:36230222-36230241 None:intergenic 35.0%
TAGCATTTCCATACTTTCTC+TGG - chr1_2:36230249-36230268 None:intergenic 35.0%
AGTATGGAAATGCTAATGCT+TGG + chr1_2:36230254-36230273 Msa0068920:CDS 35.0%
CGTAACTCTCTTATATGCTA+TGG + chr1_2:36230446-36230465 Msa0068920:intron 35.0%
! TTATACATTGCAAGTTGGCA+TGG - chr1_2:36230983-36231002 None:intergenic 35.0%
GGTTTACATACACAATGTCA+AGG - chr1_2:36231061-36231080 None:intergenic 35.0%
! CACATGTTTTCAAACCAAAC+AGG - chr1_2:36231167-36231186 None:intergenic 35.0%
AACGAAAGGGAAATGTTAAC+CGG - chr1_2:36231357-36231376 None:intergenic 35.0%
GTACAGCAAAATGAAACTGA+AGG - chr1_2:36231567-36231586 None:intergenic 35.0%
CTCCACATAAGATCACAAAA+TGG - chr1_2:36231886-36231905 None:intergenic 35.0%
! TTACATCTGAGGTAATGTCA+TGG + chr1_2:36231974-36231993 Msa0068920:intron 35.0%
TTCAGATGCTTACAGTTACA+AGG - chr1_2:36232151-36232170 None:intergenic 35.0%
! GTCCAATTAATGATTTTGGG+GGG + chr1_2:36232281-36232300 Msa0068920:intron 35.0%
!! TCCAATTAATGATTTTGGGG+GGG + chr1_2:36232282-36232301 Msa0068920:intron 35.0%
! GCTTCTCTTTCTGAGTATTT+TGG + chr1_2:36232425-36232444 Msa0068920:intron 35.0%
ATTCACCCTTGGATCTTTAT+GGG - chr1_2:36232485-36232504 None:intergenic 35.0%
TATTCACCCTTGGATCTTTA+TGG - chr1_2:36232486-36232505 None:intergenic 35.0%
GATTTGTCTGTAAATTGAGC+TGG - chr1_2:36232517-36232536 None:intergenic 35.0%
TACAGACAAATCACTTGAGA+AGG + chr1_2:36232525-36232544 Msa0068920:intron 35.0%
ACAGACAAATCACTTGAGAA+GGG + chr1_2:36232526-36232545 Msa0068920:intron 35.0%
CCACAACGGTAACAATAATT+AGG - chr1_2:36232711-36232730 None:intergenic 35.0%
CCTAATTATTGTTACCGTTG+TGG + chr1_2:36232708-36232727 Msa0068920:CDS 35.0%
TAGAAGCTACATTTCCACAA+CGG - chr1_2:36232725-36232744 None:intergenic 35.0%
GTCTTGATTGTTGCATCATT+TGG + chr1_2:36232815-36232834 Msa0068920:intron 35.0%
AATAAATCAAGAGACACAGG+AGG + chr1_2:36232955-36232974 Msa0068920:intron 35.0%
ATAAATCAAGAGACACAGGA+GGG + chr1_2:36232956-36232975 Msa0068920:intron 35.0%
TGACTTATTTGAGGGATAGT+TGG + chr1_2:36233061-36233080 Msa0068920:intron 35.0%
GTCAGATTGTCAGTTACATA+TGG + chr1_2:36233122-36233141 Msa0068920:intron 35.0%
CAGATTGTCAGTTACATATG+GGG + chr1_2:36233124-36233143 Msa0068920:intron 35.0%
ACCGGGTACATGATATATAT+TGG - chr1_2:36233181-36233200 None:intergenic 35.0%
AATATATATCATGTACCCGG+TGG + chr1_2:36233180-36233199 Msa0068920:intron 35.0%
! ATGACGGCTTTAATGTTAAG+AGG + chr1_2:36233246-36233265 Msa0068920:intron 35.0%
!! ATGTTCAAAGGGAGGTATTA+GGG + chr1_2:36233287-36233306 Msa0068920:intron 35.0%
!!! GATGGCTATTTTAGTAGGAT+AGG + chr1_2:36233900-36233919 Msa0068920:intron 35.0%
!! AGGATTTTTAGGCAACTGAA+TGG + chr1_2:36233920-36233939 Msa0068920:intron 35.0%
GGTAAAACACCAATAAGCTT+AGG + chr1_2:36233941-36233960 Msa0068920:intron 35.0%
! TTTCACGCATTTTCACACAT+CGG - chr1_2:36234136-36234155 None:intergenic 35.0%
ATAAATCGAGGGTCAGTATA+TGG - chr1_2:36234225-36234244 None:intergenic 35.0%
TTTAACACTCACTCTCCTAT+TGG + chr1_2:36234343-36234362 Msa0068920:intron 35.0%
CTATTGGATGGAATTCATGT+GGG + chr1_2:36234359-36234378 Msa0068920:intron 35.0%
! TTTATGTAGGTACCGTACTT+TGG - chr1_2:36234411-36234430 None:intergenic 35.0%
AATAGGTTAGAGGAGTGATA+TGG - chr1_2:36234481-36234500 None:intergenic 35.0%
GAAGGATCTAAATAGGTTAG+AGG - chr1_2:36234491-36234510 None:intergenic 35.0%
ATAGATATCGCTTGTAGTGA+AGG - chr1_2:36234509-36234528 None:intergenic 35.0%
TAAGGTGGTAAATGTAGTGT+TGG + chr1_2:36234775-36234794 Msa0068920:intron 35.0%
AAGGTGGTAAATGTAGTGTT+GGG + chr1_2:36234776-36234795 Msa0068920:intron 35.0%
AATGCTAGGAACATATAAGC+AGG - chr1_2:36234925-36234944 None:intergenic 35.0%
CTGTTACAAGAAAACATCCA+AGG - chr1_2:36234960-36234979 None:intergenic 35.0%
! CTTGGATGTTTTCTTGTAAC+AGG + chr1_2:36234958-36234977 Msa0068920:intron 35.0%
ACAGTGTTAGTCATGTATTG+TGG + chr1_2:36235129-36235148 Msa0068920:three_prime_UTR 35.0%
ATACCCAAAACAAGAGGAGA+AGG - chr1_2:36228136-36228155 None:intergenic 40.0%
GAGATATGGATTTGGACCAA+TGG + chr1_2:36228218-36228237 Msa0068920:exon 40.0%
CTTTAACCTTCGAGATCCAT+TGG - chr1_2:36228237-36228256 None:intergenic 40.0%
TGGATCTCGAAGGTTAAAGA+TGG + chr1_2:36228238-36228257 Msa0068920:CDS 40.0%
ACAGTTACTGGACTATTCAC+AGG - chr1_2:36228726-36228745 None:intergenic 40.0%
ATGTCACCACAAACAGTTAC+TGG - chr1_2:36228738-36228757 None:intergenic 40.0%
ACTGTTTGTGGTGACATTCA+TGG + chr1_2:36228741-36228760 Msa0068920:CDS 40.0%
GTTGTATATGTGTCTGTGTC+TGG - chr1_2:36229122-36229141 None:intergenic 40.0%
! CAAACCTTTTCCCACTAAGT+GGG - chr1_2:36229249-36229268 None:intergenic 40.0%
GTGTCTGACACTGATACTAT+TGG - chr1_2:36229306-36229325 None:intergenic 40.0%
AAACACCTACGTAGCATTGT+CGG - chr1_2:36229360-36229379 None:intergenic 40.0%
CGTAGAAGGGTTATATTAGC+AGG - chr1_2:36229473-36229492 None:intergenic 40.0%
GCTAATATAACCCTTCTACG+TGG + chr1_2:36229473-36229492 Msa0068920:CDS 40.0%
TTCATGGTTTCCACGTAGAA+GGG - chr1_2:36229486-36229505 None:intergenic 40.0%
TTTCATGGTTTCCACGTAGA+AGG - chr1_2:36229487-36229506 None:intergenic 40.0%
GTGTGAGTTGTCTACTTTCA+TGG - chr1_2:36229502-36229521 None:intergenic 40.0%
TGAAAGTAGACAACTCACAC+AGG + chr1_2:36229502-36229521 Msa0068920:CDS 40.0%
AAGTAGCAGGTTCAAATTCC+CGG + chr1_2:36229670-36229689 Msa0068920:intron 40.0%
! TCTATAGGCCTTTTGTGATC+AGG + chr1_2:36229732-36229751 Msa0068920:intron 40.0%
GATGAATGCCAGAGAAAGTA+TGG + chr1_2:36230238-36230257 Msa0068920:CDS 40.0%
CACTGCTTAAATGTGAGTAG+GGG - chr1_2:36230386-36230405 None:intergenic 40.0%
GCACTGCTTAAATGTGAGTA+GGG - chr1_2:36230387-36230406 None:intergenic 40.0%
TGCACTGCTTAAATGTGAGT+AGG - chr1_2:36230388-36230407 None:intergenic 40.0%
TTGTTCTGATGTCTGGAGAA+AGG - chr1_2:36230501-36230520 None:intergenic 40.0%
TGGTCAATTGTTCTGATGTC+TGG - chr1_2:36230508-36230527 None:intergenic 40.0%
AGACATCAGAACAATTGACC+AGG + chr1_2:36230507-36230526 Msa0068920:CDS 40.0%
AAATGCACTTAGGGCCTATT+TGG - chr1_2:36230863-36230882 None:intergenic 40.0%
AAATAGGCCCTAAGTGCATT+TGG + chr1_2:36230862-36230881 Msa0068920:intron 40.0%
AACATGTTGTGGTAAAAGGG+TGG - chr1_2:36231087-36231106 None:intergenic 40.0%
!! AATCAGAGAGGTATCAGCAA+TGG + chr1_2:36231141-36231160 Msa0068920:intron 40.0%
! GAACACATTACAGCCTGTTT+TGG - chr1_2:36231521-36231540 None:intergenic 40.0%
GACAGATAAGAGTCATTGAG+CGG + chr1_2:36231836-36231855 Msa0068920:intron 40.0%
AACTGTGAAATTCCTCACGA+GGG + chr1_2:36231859-36231878 Msa0068920:CDS 40.0%
!! GGCCATTTTGTGATCTTATG+TGG + chr1_2:36231881-36231900 Msa0068920:CDS 40.0%
GCCCATGTTTCAATATCTTC+AGG - chr1_2:36231913-36231932 None:intergenic 40.0%
ACATTACCTCAGATGTAACC+CGG - chr1_2:36231972-36231991 None:intergenic 40.0%
GCACATCAACTTGTACAAGA+AGG + chr1_2:36232098-36232117 Msa0068920:CDS 40.0%
CAGTTACAAGGCCTTTATCT+TGG - chr1_2:36232139-36232158 None:intergenic 40.0%
!!! TTTGACCAACTGGTCTTTTG+AGG + chr1_2:36232209-36232228 Msa0068920:intron 40.0%
!! CCAATTAATGATTTTGGGGG+GGG + chr1_2:36232283-36232302 Msa0068920:intron 40.0%
!! CAATTAATGATTTTGGGGGG+GGG + chr1_2:36232284-36232303 Msa0068920:intron 40.0%
!! AATTAATGATTTTGGGGGGG+GGG + chr1_2:36232285-36232304 Msa0068920:intron 40.0%
GCTTACTTGAAACACTTCAG+GGG - chr1_2:36232327-36232346 None:intergenic 40.0%
CGCTTACTTGAAACACTTCA+GGG - chr1_2:36232328-36232347 None:intergenic 40.0%
TCGCTTACTTGAAACACTTC+AGG - chr1_2:36232329-36232348 None:intergenic 40.0%
TCTGTAAATTGAGCTGGTGT+GGG - chr1_2:36232511-36232530 None:intergenic 40.0%
ACATGGTGAGACCATCTAAA+TGG - chr1_2:36232571-36232590 None:intergenic 40.0%
ATTTAGATGGTCTCACCATG+TGG + chr1_2:36232570-36232589 Msa0068920:intron 40.0%
TTTAGATGGTCTCACCATGT+GGG + chr1_2:36232571-36232590 Msa0068920:intron 40.0%
ACCATGTGGGATAACTTTCT+TGG + chr1_2:36232584-36232603 Msa0068920:intron 40.0%
ACCAAGAAAGTTATCCCACA+TGG - chr1_2:36232588-36232607 None:intergenic 40.0%
! TGTTGCATCATTTGGCTTCA+TGG + chr1_2:36232823-36232842 Msa0068920:intron 40.0%
GAAATTGGATGTTCAAAGGG+AGG + chr1_2:36233279-36233298 Msa0068920:intron 40.0%
!! GATGTTCAAAGGGAGGTATT+AGG + chr1_2:36233286-36233305 Msa0068920:intron 40.0%
! TGTTCACAGTTTAAAGCCTC+AGG - chr1_2:36233408-36233427 None:intergenic 40.0%
CATAAATGACATGCTCTGAC+TGG + chr1_2:36233739-36233758 Msa0068920:intron 40.0%
CATAGTTGAAAACCTTCCCA+TGG - chr1_2:36233792-36233811 None:intergenic 40.0%
! AGGTTTTCAACTATGAGCTC+AGG + chr1_2:36233797-36233816 Msa0068920:intron 40.0%
ATAGCAAGGATCTATTTGGC+AGG + chr1_2:36233850-36233869 Msa0068920:intron 40.0%
TCTCTGTTGCCTAAGCTTAT+TGG - chr1_2:36233953-36233972 None:intergenic 40.0%
GCATCTGTGGACAATTTATG+AGG + chr1_2:36233983-36234002 Msa0068920:intron 40.0%
TGCTGCAGAACTTAAACCAA+AGG + chr1_2:36234104-36234123 Msa0068920:intron 40.0%
! TTCACGCATTTTCACACATC+GGG - chr1_2:36234135-36234154 None:intergenic 40.0%
CCACATGAATTCCATCCAAT+AGG - chr1_2:36234361-36234380 None:intergenic 40.0%
CCTATTGGATGGAATTCATG+TGG + chr1_2:36234358-36234377 Msa0068920:intron 40.0%
! AGGTACCGTACTTTGGAAAT+GGG - chr1_2:36234404-36234423 None:intergenic 40.0%
! TAGGTACCGTACTTTGGAAA+TGG - chr1_2:36234405-36234424 None:intergenic 40.0%
!!! TTTTGGTGTTGGCGATAGTT+AGG + chr1_2:36234645-36234664 Msa0068920:intron 40.0%
CAGCATAATTGTCGCCTTAA+CGG - chr1_2:36234687-36234706 None:intergenic 40.0%
AGGTGGTAAATGTAGTGTTG+GGG + chr1_2:36234777-36234796 Msa0068920:intron 40.0%
!! TGAAACATTTGTCGGTGTCA+TGG + chr1_2:36234842-36234861 Msa0068920:intron 40.0%
AGGAGAACAATCAGATGAGA+GGG + chr1_2:36235011-36235030 Msa0068920:CDS 40.0%
AAATATGGAACACCTGTCCT+AGG - chr1_2:36235037-36235056 None:intergenic 40.0%
!! TCCTCCTTCTCCTCTTGTTT+TGG + chr1_2:36228129-36228148 Msa0068920:five_prime_UTR 45.0%
!!! CCTCCTTCTCCTCTTGTTTT+GGG + chr1_2:36228130-36228149 Msa0068920:five_prime_UTR 45.0%
TCTCTTCTCTTCTCTTCCCT+CGG - chr1_2:36228174-36228193 None:intergenic 45.0%
TTTGGACCAATGGATCTCGA+AGG + chr1_2:36228228-36228247 Msa0068920:CDS 45.0%
GTTCGTCTTCGAGAAGATGT+TGG - chr1_2:36228264-36228283 None:intergenic 45.0%
! ATGAAACTTTTCCAGACCGG+TGG + chr1_2:36228780-36228799 Msa0068920:CDS 45.0%
! TGAAACTTTTCCAGACCGGT+GGG + chr1_2:36228781-36228800 Msa0068920:CDS 45.0%
TAGGGTGACTTTGTTGATCG+CGG + chr1_2:36228932-36228951 Msa0068920:intron 45.0%
!!! ACGGCATATTTTGATCCACG+TGG + chr1_2:36229218-36229237 Msa0068920:intron 45.0%
! CTTTTCCCACTAAGTGGGAT+TGG - chr1_2:36229244-36229263 None:intergenic 45.0%
CAATCCCACTTAGTGGGAAA+AGG + chr1_2:36229242-36229261 Msa0068920:intron 45.0%
! GCAAACCTTTTCCCACTAAG+TGG - chr1_2:36229250-36229269 None:intergenic 45.0%
!! GCATTGTCGGTTCACAATGA+AGG - chr1_2:36229347-36229366 None:intergenic 45.0%
TTCAAATTCCCGGTCATAGC+AGG + chr1_2:36229680-36229699 Msa0068920:intron 45.0%
! ATCATTAGCCTGCTATGACC+GGG - chr1_2:36229691-36229710 None:intergenic 45.0%
! CATCATTAGCCTGCTATGAC+CGG - chr1_2:36229692-36229711 None:intergenic 45.0%
!! TTTTTGGGGGGCACATCTAT+AGG + chr1_2:36229717-36229736 Msa0068920:intron 45.0%
CCACAGAACCTGATCACAAA+AGG - chr1_2:36229743-36229762 None:intergenic 45.0%
! CCTTTTGTGATCAGGTTCTG+TGG + chr1_2:36229740-36229759 Msa0068920:intron 45.0%
TTGTGATCAGGTTCTGTGGA+AGG + chr1_2:36229744-36229763 Msa0068920:intron 45.0%
TGTGATCAGGTTCTGTGGAA+GGG + chr1_2:36229745-36229764 Msa0068920:intron 45.0%
ATAGAGAGAGGAAAGAGGGA+AGG - chr1_2:36230363-36230382 None:intergenic 45.0%
TTATATGCTATGGTCGACCC+AGG + chr1_2:36230456-36230475 Msa0068920:intron 45.0%
AAGTTGGCATGGCACACATT+TGG - chr1_2:36230972-36230991 None:intergenic 45.0%
GAACTGTGAAATTCCTCACG+AGG + chr1_2:36231858-36231877 Msa0068920:CDS 45.0%
ACTGTGAAATTCCTCACGAG+GGG + chr1_2:36231860-36231879 Msa0068920:CDS 45.0%
CATTACCTCAGATGTAACCC+GGG - chr1_2:36231971-36231990 None:intergenic 45.0%
GTTGATGTGCTCGACAAACA+AGG - chr1_2:36232088-36232107 None:intergenic 45.0%
AACCACCTCAAAAGACCAGT+TGG - chr1_2:36232217-36232236 None:intergenic 45.0%
CCCCCCCCAAAATCATTAAT+TGG - chr1_2:36232286-36232305 None:intergenic 45.0%
!! ATTAATGATTTTGGGGGGGG+GGG + chr1_2:36232286-36232305 Msa0068920:intron 45.0%
!! AGCTTGAGCTTGCTGTTTGA+GGG + chr1_2:36232348-36232367 Msa0068920:intron 45.0%
!!! GGACTCGGTTATTTTCAGGT+GGG + chr1_2:36232370-36232389 Msa0068920:intron 45.0%
!!! GACTCGGTTATTTTCAGGTG+GGG + chr1_2:36232371-36232390 Msa0068920:intron 45.0%
!!! ACTCGGTTATTTTCAGGTGG+GGG + chr1_2:36232372-36232391 Msa0068920:intron 45.0%
!!! GTATTTTGGAGTAGCTGTCG+TGG + chr1_2:36232439-36232458 Msa0068920:intron 45.0%
GTCTGTAAATTGAGCTGGTG+TGG - chr1_2:36232512-36232531 None:intergenic 45.0%
GTTGGCGTGTTCATTACAGT+TGG + chr1_2:36233079-36233098 Msa0068920:intron 45.0%
AACAAGCATCAGCAGCTTCA+GGG - chr1_2:36233349-36233368 None:intergenic 45.0%
TAACAAGCATCAGCAGCTTC+AGG - chr1_2:36233350-36233369 None:intergenic 45.0%
TGACTGGAAAGTGGTACGAT+TGG + chr1_2:36233755-36233774 Msa0068920:intron 45.0%
TGGAAAGTGGTACGATTGGT+CGG + chr1_2:36233759-36233778 Msa0068920:intron 45.0%
TGGACAATTTATGAGGCAGC+TGG + chr1_2:36233990-36234009 Msa0068920:intron 45.0%
CACAGTTACTCAAGTCTCGT+AGG - chr1_2:36234199-36234218 None:intergenic 45.0%
ACACTCACTCTCCTATTGGA+TGG + chr1_2:36234347-36234366 Msa0068920:intron 45.0%
TGGGACCCATTTCCAAAGTA+CGG + chr1_2:36234396-36234415 Msa0068920:intron 45.0%
GCGATATCTATCCTTGTCTC+TGG + chr1_2:36234518-36234537 Msa0068920:intron 45.0%
TTGGATATGGACCAGAGACA+AGG - chr1_2:36234532-36234551 None:intergenic 45.0%
TGTTGGCGATAGTTAGGCTA+TGG + chr1_2:36234651-36234670 Msa0068920:intron 45.0%
! ATGGTTGGTACATGCCGTTA+AGG + chr1_2:36234670-36234689 Msa0068920:intron 45.0%
GGGTCAGTAACCAAAATGCT+AGG - chr1_2:36234939-36234958 None:intergenic 45.0%
!!! GCATTTTGGTTACTGACCCT+TGG + chr1_2:36234940-36234959 Msa0068920:intron 45.0%
GAGGAGAACAATCAGATGAG+AGG + chr1_2:36235010-36235029 Msa0068920:CDS 45.0%
!! TAAAAAAATCATTAAATAAA+AGG - chr1_2:36229426-36229445 None:intergenic 5.0%
!!! TTTATTTGTTAAAATAAATT+GGG + chr1_2:36229802-36229821 Msa0068920:intron 5.0%
!!! ATTTTATTGATTTTTTAATA+TGG - chr1_2:36233464-36233483 None:intergenic 5.0%
!! GATTTAAAAATAAAAATATA+TGG - chr1_2:36234724-36234743 None:intergenic 5.0%
CCCAAAACAAGAGGAGAAGG+AGG - chr1_2:36228133-36228152 None:intergenic 50.0%
! ATTTTTGTTCGACAGCGCCG+AGG + chr1_2:36228154-36228173 Msa0068920:five_prime_UTR 50.0%
!! TTTTTGTTCGACAGCGCCGA+GGG + chr1_2:36228155-36228174 Msa0068920:five_prime_UTR 50.0%
AGAGAGAGAGAGAGAGAGAG+GGG - chr1_2:36228095-36228114 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - chr1_2:36228094-36228113 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr1_2:36228095-36228114 None:intergenic 50.0%
GTGAACCGACAATGCTACGT+AGG + chr1_2:36229352-36229371 Msa0068920:intron 50.0%
GGGGATAGAGAGAGGAAAGA+GGG - chr1_2:36230367-36230386 None:intergenic 50.0%
AGGGGATAGAGAGAGGAAAG+AGG - chr1_2:36230368-36230387 None:intergenic 50.0%
TGTGAGTAGGGGATAGAGAG+AGG - chr1_2:36230375-36230394 None:intergenic 50.0%
ACCCAGGTGCTTTGTGTTCA+CGG + chr1_2:36230472-36230491 Msa0068920:intron 50.0%
! ACCGTGAACACAAAGCACCT+GGG - chr1_2:36230476-36230495 None:intergenic 50.0%
GTAGAGTTCGACCAGCAACT+GGG - chr1_2:36230548-36230567 None:intergenic 50.0%
TGTAGAGTTCGACCAGCAAC+TGG - chr1_2:36230549-36230568 None:intergenic 50.0%
GTTGTGGTAAAAGGGTGGAC+AGG - chr1_2:36231082-36231101 None:intergenic 50.0%
GGTATCAGCAATGGCCTGTT+TGG + chr1_2:36231150-36231169 Msa0068920:intron 50.0%
AACATCCTTAACCAGTGCCC+CGG + chr1_2:36231326-36231345 Msa0068920:intron 50.0%
GTGCTCGACAAACAAGGTCA+AGG - chr1_2:36232082-36232101 None:intergenic 50.0%
!!! GACCAACTGGTCTTTTGAGG+TGG + chr1_2:36232212-36232231 Msa0068920:intron 50.0%
!!! GTCTTTTGAGGTGGTTCGTC+CGG + chr1_2:36232221-36232240 Msa0068920:intron 50.0%
!! TTAATGATTTTGGGGGGGGG+GGG + chr1_2:36232287-36232306 Msa0068920:intron 50.0%
!! GAGCTTGAGCTTGCTGTTTG+AGG + chr1_2:36232347-36232366 Msa0068920:intron 50.0%
!! GCTTGAGCTTGCTGTTTGAG+GGG + chr1_2:36232349-36232368 Msa0068920:intron 50.0%
!! GAGGGGACTCGGTTATTTTC+AGG + chr1_2:36232366-36232385 Msa0068920:intron 50.0%
!! GGGACTCGGTTATTTTCAGG+TGG + chr1_2:36232369-36232388 Msa0068920:intron 50.0%
! GAGCATTGTGGGGCAAAATC+AGG + chr1_2:36232394-36232413 Msa0068920:intron 50.0%
!! GTCTAAACGCTGATTCCACC+GGG - chr1_2:36233198-36233217 None:intergenic 50.0%
!! CGTCTAAACGCTGATTCCAC+CGG - chr1_2:36233199-36233218 None:intergenic 50.0%
ACAAGCATCAGCAGCTTCAG+GGG - chr1_2:36233348-36233367 None:intergenic 50.0%
GACATGCTCTGACTGGAAAG+TGG + chr1_2:36233746-36233765 Msa0068920:intron 50.0%
! AAAGTGGTACGATTGGTCGG+TGG + chr1_2:36233762-36233781 Msa0068920:intron 50.0%
AGCTTAGGCAACAGAGAGCT+TGG + chr1_2:36233956-36233975 Msa0068920:intron 50.0%
AGGCAACAGAGAGCTTGGAA+AGG + chr1_2:36233961-36233980 Msa0068920:intron 50.0%
!! AGAGCTTGGAAAGGCATCTG+TGG + chr1_2:36233970-36233989 Msa0068920:intron 50.0%
CAATTTATGAGGCAGCTGGC+AGG + chr1_2:36233994-36234013 Msa0068920:intron 50.0%
! TGTGGGTGTCACACTTCATG+TGG + chr1_2:36234376-36234395 Msa0068920:intron 50.0%
! GTGGGTGTCACACTTCATGT+GGG + chr1_2:36234377-36234396 Msa0068920:intron 50.0%
GGCGATAGTTAGGCTATGGT+TGG + chr1_2:36234655-36234674 Msa0068920:intron 50.0%
ACAATCAGATGAGAGGGCCT+AGG + chr1_2:36235017-36235036 Msa0068920:CDS 50.0%
!! ACTAAGTGGGATTGGCCACG+TGG - chr1_2:36229236-36229255 None:intergenic 55.0%
ACGTGGCCAATCCCACTTAG+TGG + chr1_2:36229235-36229254 Msa0068920:intron 55.0%
CGTGGCCAATCCCACTTAGT+GGG + chr1_2:36229236-36229255 Msa0068920:intron 55.0%
! CACCGTGAACACAAAGCACC+TGG - chr1_2:36230477-36230496 None:intergenic 55.0%
CAGGTGCTTTGTGTTCACGG+TGG + chr1_2:36230475-36230494 Msa0068920:intron 55.0%
GTTCGACCAGCAACTGGGAA+GGG - chr1_2:36230543-36230562 None:intergenic 55.0%
AGTTCGACCAGCAACTGGGA+AGG - chr1_2:36230544-36230563 None:intergenic 55.0%
GTCATGTTAACCAGTGCCCC+CGG + chr1_2:36231197-36231216 Msa0068920:intron 55.0%
TCATGTTAACCAGTGCCCCC+GGG + chr1_2:36231198-36231217 Msa0068920:intron 55.0%
TGCTTCCTTAACCAGTGCCC+CGG - chr1_2:36231219-36231238 None:intergenic 55.0%
ACATCCTTAACCAGTGCCCC+GGG + chr1_2:36231327-36231346 Msa0068920:intron 55.0%
AAATGTTAACCGGTGCCCCC+GGG - chr1_2:36231347-36231366 None:intergenic 55.0%
GAAATGTTAACCGGTGCCCC+CGG - chr1_2:36231348-36231367 None:intergenic 55.0%
TCACAAAATGGCCCCTCGTG+AGG - chr1_2:36231874-36231893 None:intergenic 55.0%
AAAAGCCAACCAGCTCCACG+TGG - chr1_2:36231943-36231962 None:intergenic 55.0%
!!! CGTGGAGCTGGTTGGCTTTT+CGG + chr1_2:36231943-36231962 Msa0068920:CDS 55.0%
!!! CTGGTTGGCTTTTCGGATCC+CGG + chr1_2:36231950-36231969 Msa0068920:CDS 55.0%
!!! TGGTTGGCTTTTCGGATCCC+GGG + chr1_2:36231951-36231970 Msa0068920:CDS 55.0%
!! TAATGATTTTGGGGGGGGGG+GGG + chr1_2:36232288-36232307 Msa0068920:intron 55.0%
!! GCTTGCTGTTTGAGGGGACT+CGG + chr1_2:36232355-36232374 Msa0068920:intron 55.0%
!! TTTCAGGTGGGGGAGCATTG+TGG + chr1_2:36232382-36232401 Msa0068920:intron 55.0%
!! TTCAGGTGGGGGAGCATTGT+GGG + chr1_2:36232383-36232402 Msa0068920:intron 55.0%
GGTGTGGGTGTATTCACCCT+TGG - chr1_2:36232496-36232515 None:intergenic 55.0%
CAAGCATCAGCAGCTTCAGG+GGG - chr1_2:36233347-36233366 None:intergenic 55.0%
ATTGGTCGGTGGCGATCCAT+GGG + chr1_2:36233773-36233792 Msa0068920:intron 55.0%
CACACATCGGGCATGACCTT+TGG - chr1_2:36234123-36234142 None:intergenic 55.0%
GGGAAGGGAGCTAGAGAACC+TGG - chr1_2:36230528-36230547 None:intergenic 60.0%
CTAGCTCCCTTCCCAGTTGC+TGG + chr1_2:36230534-36230553 Msa0068920:intron 60.0%
CATGTTAACCAGTGCCCCCG+GGG + chr1_2:36231199-36231218 Msa0068920:intron 60.0%
TTCCTTAACCAGTGCCCCGG+GGG - chr1_2:36231216-36231235 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG - chr1_2:36231217-36231236 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG - chr1_2:36231218-36231237 None:intergenic 60.0%
CATCCTTAACCAGTGCCCCG+GGG + chr1_2:36231328-36231347 Msa0068920:intron 60.0%
ATCCTTAACCAGTGCCCCGG+GGG + chr1_2:36231329-36231348 Msa0068920:intron 60.0%
AATGTTAACCGGTGCCCCCG+GGG - chr1_2:36231346-36231365 None:intergenic 60.0%
ACATGGGCAGTCAGTCCACG+TGG + chr1_2:36231925-36231944 Msa0068920:CDS 60.0%
TCAGTCCACGTGGAGCTGGT+TGG + chr1_2:36231935-36231954 Msa0068920:CDS 60.0%
CGGATCCCGGGTTACATCTG+AGG + chr1_2:36231963-36231982 Msa0068920:CDS 60.0%
!! AATGATTTTGGGGGGGGGGG+GGG + chr1_2:36232289-36232308 Msa0068920:intron 60.0%
!! TCAGGTGGGGGAGCATTGTG+GGG + chr1_2:36232384-36232403 Msa0068920:intron 60.0%
! GATTGGTCGGTGGCGATCCA+TGG + chr1_2:36233772-36233791 Msa0068920:intron 60.0%
CAGATGAGAGGGCCTAGGAC+AGG + chr1_2:36235022-36235041 Msa0068920:CDS 60.0%
GCAGTCAGTCCACGTGGAGC+TGG + chr1_2:36231931-36231950 Msa0068920:CDS 65.0%
!! ATGATTTTGGGGGGGGGGGG+GGG + chr1_2:36232290-36232309 Msa0068920:intron 65.0%
GTCGGTGGCGATCCATGGGA+AGG + chr1_2:36233777-36233796 Msa0068920:intron 65.0%
AGTCTCGGGCACGTGCCCAC+CGG - chr1_2:36228799-36228818 None:intergenic 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + chr1_2:36231211-36231230 Msa0068920:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr1_2:36231211-36231230 None:intergenic 70.0%
AACCAGTGCCCCCGGGGCAC+TGG + chr1_2:36231205-36231224 Msa0068920:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG - chr1_2:36231335-36231354 None:intergenic 75.0%
! AACCAGTGCCCCGGGGGCAC+CGG + chr1_2:36231335-36231354 Msa0068920:intron 75.0%
!! ATTTTGGGGGGGGGGGGGGG+TGG + chr1_2:36232293-36232312 Msa0068920:intron 75.0%
! CGGGCACGTGCCCACCGGTC+TGG - chr1_2:36228794-36228813 None:intergenic 80.0%
! AACCGGTGCCCCCGGGGCAC+TGG - chr1_2:36231340-36231359 None:intergenic 80.0%
! GGGGGGGGGGGGGGTGGTAA+AGG + chr1_2:36232299-36232318 Msa0068920:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 36228024 36235361 36228024 ID=Msa0068920;Name=Msa0068920
chr1_2 mRNA 36228024 36235361 36228024 ID=Msa0068920-mRNA-1;Parent=Msa0068920;Name=Msa0068920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=199|1|1|1|1|1|10|298|303
chr1_2 exon 36228024 36228303 36228024 ID=Msa0068920-mRNA-1:exon:11553;Parent=Msa0068920-mRNA-1
chr1_2 exon 36228687 36228833 36228687 ID=Msa0068920-mRNA-1:exon:11554;Parent=Msa0068920-mRNA-1
chr1_2 exon 36228935 36229002 36228935 ID=Msa0068920-mRNA-1:exon:11555;Parent=Msa0068920-mRNA-1
chr1_2 exon 36229466 36229523 36229466 ID=Msa0068920-mRNA-1:exon:11556;Parent=Msa0068920-mRNA-1
chr1_2 exon 36230223 36230333 36230223 ID=Msa0068920-mRNA-1:exon:11557;Parent=Msa0068920-mRNA-1
chr1_2 exon 36230478 36230528 36230478 ID=Msa0068920-mRNA-1:exon:11558;Parent=Msa0068920-mRNA-1
chr1_2 exon 36231841 36231984 36231841 ID=Msa0068920-mRNA-1:exon:11559;Parent=Msa0068920-mRNA-1
chr1_2 exon 36232062 36232157 36232062 ID=Msa0068920-mRNA-1:exon:11560;Parent=Msa0068920-mRNA-1
chr1_2 exon 36232696 36232767 36232696 ID=Msa0068920-mRNA-1:exon:11561;Parent=Msa0068920-mRNA-1
chr1_2 exon 36234980 36235361 36234980 ID=Msa0068920-mRNA-1:exon:11562;Parent=Msa0068920-mRNA-1
chr1_2 five_prime_UTR 36228024 36228222 36228024 ID=Msa0068920-mRNA-1:five_prime_utr;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36228223 36228303 36228223 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36228687 36228833 36228687 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36228935 36229002 36228935 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36229466 36229523 36229466 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36230223 36230333 36230223 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36230478 36230528 36230478 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36231841 36231984 36231841 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36232062 36232157 36232062 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36232696 36232767 36232696 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 CDS 36234980 36235063 36234980 ID=Msa0068920-mRNA-1:cds;Parent=Msa0068920-mRNA-1
chr1_2 three_prime_UTR 36235064 36235361 36235064 ID=Msa0068920-mRNA-1:three_prime_utr;Parent=Msa0068920-mRNA-1
Gene Sequence

>Msa0068920

ATGGATTTGGACCAATGGATCTCGAAGGTTAAAGATGGCCAACATCTTCTCGAAGACGAACTTCAACTTCTCTGCGAATACGTTAAAGAGATCTTAATTGAGGAATCGAATGTGCAACCTGTGAATAGTCCAGTAACTGTTTGTGGTGACATTCATGGTCAGTTTCATGATCTAATGAAACTTTTCCAGACCGGTGGGCACGTGCCCGAGACTAATTACATTTTTATGGGTGACTTTGTTGATCGCGGTTATAATAGTCTCGAAGTATTCACCATCCTTTTGCTTCTTAAAGCTAGATACCCTGCTAATATAACCCTTCTACGTGGAAACCATGAAAGTAGACAACTCACACAGGTCTATGGATTTTATGATGAATGCCAGAGAAAGTATGGAAATGCTAATGCTTGGCGATATTGTACCGATGTTTTCGACTATCTTACACTTTCTGCAATTATAGATGGAACTGTGCTTTGTGTTCACGGTGGCCTTTCTCCAGACATCAGAACAATTGACCAGATAAGAGTCATTGAGCGGAACTGTGAAATTCCTCACGAGGGGCCATTTTGTGATCTTATGTGGAGTGATCCTGAAGATATTGAAACATGGGCAGTCAGTCCACGTGGAGCTGGTTGGCTTTTCGGATCCCGGGTTACATCTGAGTTTAATCACATAAACAACCTTGACCTTGTTTGTCGAGCACATCAACTTGTACAAGAAGGACTTAAGTACATGTTCCAAGATAAAGGCCTTGTAACTGTATGGTCTGCACCTAATTATTGTTACCGTTGTGGAAATGTAGCTTCTATTCTTAGTTTCAATGAAAATATGGAGAGAGAAGTTAAGTTTTTCACTGAAACAGAGGAGAACAATCAGATGAGAGGGCCTAGGACAGGTGTTCCATATTTCTTATAA

Protein sequence

>Msa0068920

MDLDQWISKVKDGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL*