Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0069420 | XP_003591973.1 | 99.830 | 589 | 1 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1205 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0069420 | sp|Q9LU46|RH35_ARATH | 87.097 | 589 | 74 | 1 | 1 | 589 | 5 | 591 | 0.0 | 1060 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0069420 | G7I9M7 | 99.830 | 589 | 1 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1205 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0069420 | Msa0173070 | 0.811382 | 7.198033e-51 | -8.615850e-47 |
Msa0069420 | Msa0660600 | 0.845272 | 4.503979e-59 | -8.615850e-47 |
Msa0069420 | Msa1420440 | 0.821577 | 3.750816e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0069420 | MtrunA17_Chr1g0200181 | 99.830 | 589 | 1 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1205 |
Msa0069420 | MtrunA17_Chr1g0157691 | 94.208 | 587 | 33 | 1 | 3 | 589 | 6 | 591 | 0.0 | 1129 |
Msa0069420 | MtrunA17_Chr2g0330401 | 40.431 | 418 | 236 | 5 | 115 | 529 | 66 | 473 | 2.98e-100 | 313 |
Msa0069420 | MtrunA17_Chr3g0107851 | 38.614 | 404 | 226 | 5 | 109 | 498 | 77 | 472 | 1.74e-96 | 305 |
Msa0069420 | MtrunA17_Chr3g0121351 | 38.889 | 414 | 227 | 7 | 134 | 530 | 134 | 538 | 9.93e-94 | 300 |
Msa0069420 | MtrunA17_Chr7g0270131 | 43.468 | 421 | 222 | 8 | 115 | 530 | 202 | 611 | 1.31e-93 | 304 |
Msa0069420 | MtrunA17_Chr1g0176041 | 39.803 | 407 | 224 | 7 | 134 | 526 | 143 | 542 | 2.00e-91 | 293 |
Msa0069420 | MtrunA17_Chr6g0449911 | 39.563 | 412 | 229 | 8 | 124 | 529 | 144 | 541 | 2.27e-91 | 296 |
Msa0069420 | MtrunA17_Chr4g0076491 | 36.449 | 428 | 247 | 4 | 118 | 527 | 260 | 680 | 5.98e-90 | 292 |
Msa0069420 | MtrunA17_Chr6g0449741 | 36.574 | 432 | 247 | 5 | 114 | 527 | 218 | 640 | 1.02e-88 | 288 |
Msa0069420 | MtrunA17_Chr4g0063551 | 38.537 | 410 | 228 | 5 | 136 | 528 | 131 | 533 | 9.52e-87 | 283 |
Msa0069420 | MtrunA17_Chr2g0277821 | 36.726 | 452 | 263 | 9 | 115 | 558 | 474 | 910 | 1.67e-83 | 283 |
Msa0069420 | MtrunA17_Chr2g0293631 | 39.709 | 413 | 231 | 7 | 123 | 530 | 474 | 873 | 7.78e-83 | 281 |
Msa0069420 | MtrunA17_Chr5g0409981 | 38.481 | 395 | 226 | 8 | 136 | 523 | 95 | 479 | 1.68e-78 | 257 |
Msa0069420 | MtrunA17_Chr4g0058591 | 39.368 | 348 | 199 | 4 | 115 | 459 | 172 | 510 | 1.48e-71 | 239 |
Msa0069420 | MtrunA17_Chr5g0442191 | 38.889 | 360 | 197 | 9 | 155 | 506 | 91 | 435 | 1.99e-64 | 221 |
Msa0069420 | MtrunA17_Chr4g0040761 | 33.171 | 410 | 247 | 6 | 146 | 541 | 20 | 416 | 2.24e-64 | 225 |
Msa0069420 | MtrunA17_Chr6g0461751 | 31.616 | 427 | 275 | 9 | 124 | 546 | 120 | 533 | 1.95e-63 | 218 |
Msa0069420 | MtrunA17_Chr7g0271121 | 35.598 | 368 | 220 | 5 | 145 | 506 | 106 | 462 | 2.26e-63 | 222 |
Msa0069420 | MtrunA17_Chr7g0236841 | 33.777 | 376 | 225 | 6 | 137 | 505 | 2 | 360 | 4.86e-63 | 214 |
Msa0069420 | MtrunA17_Chr6g0483491 | 33.777 | 376 | 225 | 6 | 137 | 505 | 2 | 360 | 5.12e-63 | 214 |
Msa0069420 | MtrunA17_Chr3g0095031 | 37.989 | 358 | 199 | 9 | 155 | 504 | 100 | 442 | 6.92e-63 | 216 |
Msa0069420 | MtrunA17_Chr3g0098121 | 35.342 | 365 | 216 | 6 | 145 | 502 | 152 | 503 | 4.45e-61 | 216 |
Msa0069420 | MtrunA17_Chr1g0193491 | 35.342 | 365 | 218 | 6 | 151 | 508 | 120 | 473 | 7.39e-61 | 213 |
Msa0069420 | MtrunA17_Chr7g0263771 | 34.135 | 416 | 243 | 11 | 125 | 529 | 109 | 504 | 1.15e-59 | 209 |
Msa0069420 | MtrunA17_Chr2g0300291 | 34.771 | 371 | 223 | 6 | 145 | 509 | 141 | 498 | 1.99e-59 | 211 |
Msa0069420 | MtrunA17_Chr2g0310581 | 34.239 | 368 | 215 | 6 | 145 | 502 | 53 | 403 | 1.69e-57 | 201 |
Msa0069420 | MtrunA17_Chr2g0299681 | 30.848 | 389 | 250 | 8 | 145 | 530 | 41 | 413 | 7.68e-55 | 191 |
Msa0069420 | MtrunA17_Chr4g0070981 | 30.848 | 389 | 250 | 8 | 145 | 530 | 41 | 413 | 1.15e-54 | 191 |
Msa0069420 | MtrunA17_Chr2g0297261 | 31.458 | 391 | 249 | 7 | 143 | 530 | 32 | 406 | 1.27e-54 | 190 |
Msa0069420 | MtrunA17_Chr2g0329931 | 30.513 | 390 | 252 | 8 | 144 | 530 | 40 | 413 | 4.42e-53 | 186 |
Msa0069420 | MtrunA17_Chr4g0062301 | 35.629 | 334 | 196 | 9 | 163 | 488 | 115 | 437 | 1.07e-52 | 189 |
Msa0069420 | MtrunA17_Chr8g0342861 | 29.820 | 389 | 254 | 8 | 145 | 530 | 41 | 413 | 3.01e-52 | 184 |
Msa0069420 | MtrunA17_Chr3g0114081 | 32.419 | 401 | 231 | 13 | 146 | 517 | 15 | 404 | 3.34e-52 | 188 |
Msa0069420 | MtrunA17_Chr2g0307471 | 31.492 | 362 | 233 | 6 | 144 | 499 | 90 | 442 | 6.41e-52 | 187 |
Msa0069420 | MtrunA17_Chr8g0347171 | 34.844 | 353 | 207 | 7 | 156 | 493 | 171 | 515 | 9.37e-50 | 182 |
Msa0069420 | MtrunA17_Chr7g0247191 | 28.756 | 386 | 258 | 5 | 146 | 530 | 151 | 520 | 2.02e-49 | 179 |
Msa0069420 | MtrunA17_Chr7g0247221 | 29.016 | 386 | 257 | 5 | 146 | 530 | 144 | 513 | 2.64e-49 | 179 |
Msa0069420 | MtrunA17_Chr1g0204391 | 32.518 | 409 | 220 | 11 | 130 | 504 | 32 | 418 | 2.94e-49 | 180 |
Msa0069420 | MtrunA17_Chr7g0247181 | 28.756 | 386 | 258 | 5 | 146 | 530 | 141 | 510 | 4.39e-49 | 178 |
Msa0069420 | MtrunA17_Chr2g0301281 | 28.365 | 416 | 218 | 8 | 163 | 505 | 60 | 468 | 4.41e-49 | 180 |
Msa0069420 | MtrunA17_Chr6g0475251 | 32.533 | 375 | 229 | 9 | 140 | 504 | 101 | 461 | 7.30e-49 | 180 |
Msa0069420 | MtrunA17_Chr4g0029191 | 28.780 | 410 | 212 | 9 | 163 | 499 | 63 | 465 | 8.58e-49 | 179 |
Msa0069420 | MtrunA17_Chr8g0347161 | 32.391 | 389 | 224 | 11 | 133 | 493 | 80 | 457 | 2.12e-48 | 177 |
Msa0069420 | MtrunA17_Chr4g0003441 | 30.939 | 362 | 227 | 8 | 146 | 500 | 109 | 454 | 2.46e-48 | 175 |
Msa0069420 | MtrunA17_Chr6g0466611 | 29.306 | 389 | 235 | 9 | 137 | 501 | 134 | 506 | 1.92e-43 | 165 |
Msa0069420 | MtrunA17_Chr8g0347151 | 32.865 | 356 | 210 | 8 | 156 | 493 | 212 | 556 | 5.74e-43 | 163 |
Msa0069420 | MtrunA17_Chr8g0386451 | 33.148 | 359 | 217 | 10 | 156 | 499 | 299 | 649 | 1.08e-42 | 163 |
Msa0069420 | MtrunA17_Chr1g0149251 | 31.677 | 322 | 203 | 7 | 183 | 500 | 2 | 310 | 4.98e-42 | 154 |
Msa0069420 | MtrunA17_Chr2g0309551 | 27.446 | 419 | 247 | 8 | 137 | 503 | 101 | 514 | 1.61e-41 | 157 |
Msa0069420 | MtrunA17_Chr5g0443991 | 33.140 | 344 | 211 | 9 | 164 | 499 | 95 | 427 | 2.55e-41 | 159 |
Msa0069420 | MtrunA17_Chr1g0179761 | 31.139 | 395 | 212 | 15 | 166 | 521 | 102 | 475 | 1.94e-40 | 153 |
Msa0069420 | MtrunA17_Chr7g0236831 | 27.902 | 448 | 245 | 11 | 146 | 523 | 164 | 603 | 3.08e-39 | 153 |
Msa0069420 | MtrunA17_Chr4g0034411 | 31.662 | 379 | 234 | 13 | 141 | 510 | 73 | 435 | 1.66e-37 | 148 |
Msa0069420 | MtrunA17_Chr1g0192021 | 26.506 | 415 | 238 | 9 | 144 | 506 | 25 | 424 | 3.07e-36 | 143 |
Msa0069420 | MtrunA17_Chr3g0145781 | 26.494 | 385 | 246 | 11 | 143 | 499 | 130 | 505 | 6.68e-34 | 135 |
Msa0069420 | MtrunA17_Chr1g0169331 | 29.603 | 277 | 181 | 8 | 264 | 530 | 126 | 398 | 2.32e-30 | 123 |
Msa0069420 | MtrunA17_Chr5g0429221 | 26.287 | 369 | 240 | 12 | 143 | 500 | 1 | 348 | 9.07e-29 | 119 |
Msa0069420 | MtrunA17_Chr4g0062321 | 34.112 | 214 | 130 | 6 | 259 | 464 | 23 | 233 | 2.49e-27 | 110 |
Msa0069420 | MtrunA17_Chr4g0074521 | 28.861 | 395 | 215 | 14 | 135 | 488 | 72 | 441 | 3.13e-27 | 115 |
Msa0069420 | MtrunA17_Chr4g0039471 | 30.830 | 253 | 136 | 7 | 102 | 346 | 192 | 413 | 1.28e-25 | 109 |
Msa0069420 | MtrunA17_Chr8g0354761 | 24.217 | 351 | 231 | 9 | 165 | 499 | 28 | 359 | 3.29e-21 | 96.7 |
Msa0069420 | MtrunA17_Chr8g0342851 | 22.992 | 361 | 229 | 8 | 175 | 530 | 3 | 319 | 2.88e-20 | 92.0 |
Msa0069420 | MtrunA17_Chr4g0004301 | 25.773 | 388 | 209 | 13 | 182 | 503 | 70 | 444 | 3.08e-20 | 94.4 |
Msa0069420 | MtrunA17_Chr8g0349951 | 35.294 | 170 | 96 | 4 | 137 | 305 | 2 | 158 | 4.46e-20 | 87.4 |
Msa0069420 | MtrunA17_Chr5g0434301 | 25.393 | 382 | 218 | 12 | 182 | 503 | 70 | 444 | 1.63e-19 | 92.0 |
Msa0069420 | MtrunA17_Chr3g0137901 | 38.835 | 103 | 63 | 0 | 398 | 500 | 44 | 146 | 4.28e-19 | 85.5 |
Msa0069420 | MtrunA17_Chr4g0025141 | 30.688 | 189 | 103 | 4 | 333 | 499 | 15 | 197 | 6.35e-18 | 83.6 |
Msa0069420 | MtrunA17_Chr1g0155201 | 27.092 | 251 | 148 | 8 | 266 | 504 | 1 | 228 | 2.88e-16 | 80.5 |
Msa0069420 | MtrunA17_Chr3g0137891 | 31.928 | 166 | 98 | 6 | 183 | 346 | 2 | 154 | 3.23e-16 | 78.2 |
Msa0069420 | MtrunA17_Chr0c30g0494091 | 30.876 | 217 | 130 | 7 | 135 | 342 | 72 | 277 | 4.13e-16 | 80.5 |
Msa0069420 | MtrunA17_Chr4g0058601 | 45.714 | 70 | 37 | 1 | 460 | 529 | 9 | 77 | 1.64e-13 | 67.4 |
Msa0069420 | MtrunA17_Chr3g0108851 | 23.810 | 357 | 230 | 10 | 153 | 496 | 2 | 329 | 1.71e-13 | 73.9 |
Msa0069420 | MtrunA17_Chr8g0377041 | 33.051 | 118 | 74 | 1 | 388 | 500 | 480 | 597 | 7.63e-13 | 71.6 |
Msa0069420 | MtrunA17_Chr8g0364251 | 25.743 | 202 | 132 | 4 | 320 | 505 | 345 | 544 | 3.37e-12 | 69.3 |
Msa0069420 | MtrunA17_Chr4g0025101 | 27.830 | 212 | 102 | 7 | 314 | 508 | 5 | 182 | 6.71e-11 | 62.4 |
Msa0069420 | MtrunA17_Chr5g0409101 | 21.591 | 352 | 223 | 10 | 163 | 490 | 86 | 408 | 8.86e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0069420 | AT5G51280.1 | 87.097 | 589 | 74 | 1 | 1 | 589 | 5 | 591 | 0.0 | 1060 |
Msa0069420 | AT4G33370.1 | 75.382 | 589 | 98 | 1 | 1 | 589 | 1 | 542 | 0.0 | 909 |
Msa0069420 | AT1G55150.1 | 39.277 | 415 | 239 | 5 | 118 | 529 | 73 | 477 | 9.42e-100 | 312 |
Msa0069420 | AT1G55150.2 | 39.277 | 415 | 239 | 5 | 118 | 529 | 98 | 502 | 7.00e-99 | 311 |
Msa0069420 | AT5G63120.2 | 41.190 | 420 | 232 | 7 | 115 | 530 | 136 | 544 | 2.66e-97 | 309 |
Msa0069420 | AT3G58510.1 | 38.272 | 405 | 231 | 6 | 134 | 526 | 141 | 538 | 1.42e-93 | 300 |
Msa0069420 | AT3G58510.3 | 38.272 | 405 | 231 | 6 | 134 | 526 | 141 | 538 | 1.42e-93 | 300 |
Msa0069420 | AT3G58510.2 | 38.272 | 405 | 231 | 6 | 134 | 526 | 141 | 538 | 1.42e-93 | 300 |
Msa0069420 | AT2G47330.1 | 40.708 | 452 | 251 | 9 | 85 | 530 | 168 | 608 | 3.55e-93 | 303 |
Msa0069420 | AT2G33730.1 | 37.617 | 428 | 242 | 4 | 118 | 527 | 287 | 707 | 1.07e-92 | 301 |
Msa0069420 | AT3G58570.1 | 38.875 | 409 | 229 | 7 | 132 | 526 | 134 | 535 | 4.36e-92 | 296 |
Msa0069420 | AT2G42520.2 | 37.897 | 409 | 233 | 6 | 132 | 526 | 147 | 548 | 6.38e-92 | 296 |
Msa0069420 | AT2G42520.1 | 37.897 | 409 | 233 | 6 | 132 | 526 | 147 | 548 | 6.38e-92 | 296 |
Msa0069420 | AT2G42520.3 | 37.897 | 409 | 233 | 6 | 132 | 526 | 147 | 548 | 6.38e-92 | 296 |
Msa0069420 | AT1G20920.2 | 36.807 | 451 | 268 | 7 | 115 | 560 | 162 | 600 | 5.44e-90 | 296 |
Msa0069420 | AT1G20920.4 | 36.807 | 451 | 268 | 7 | 115 | 560 | 500 | 938 | 4.56e-88 | 296 |
Msa0069420 | AT1G20920.6 | 36.807 | 451 | 268 | 7 | 115 | 560 | 500 | 938 | 4.56e-88 | 296 |
Msa0069420 | AT1G20920.3 | 36.807 | 451 | 268 | 7 | 115 | 560 | 500 | 938 | 4.56e-88 | 296 |
Msa0069420 | AT1G20920.7 | 36.807 | 451 | 268 | 7 | 115 | 560 | 500 | 938 | 4.56e-88 | 296 |
Msa0069420 | AT1G20920.5 | 36.807 | 451 | 268 | 7 | 115 | 560 | 500 | 938 | 4.56e-88 | 296 |
Msa0069420 | AT1G20920.1 | 36.807 | 451 | 268 | 7 | 115 | 560 | 500 | 938 | 4.56e-88 | 296 |
Msa0069420 | AT3G01540.1 | 39.512 | 410 | 226 | 8 | 128 | 530 | 142 | 536 | 1.89e-87 | 284 |
Msa0069420 | AT3G01540.4 | 39.416 | 411 | 227 | 8 | 127 | 530 | 141 | 536 | 1.89e-87 | 284 |
Msa0069420 | AT3G01540.2 | 39.416 | 411 | 227 | 8 | 127 | 530 | 141 | 536 | 1.89e-87 | 284 |
Msa0069420 | AT3G01540.3 | 39.416 | 411 | 227 | 8 | 127 | 530 | 141 | 536 | 1.89e-87 | 284 |
Msa0069420 | AT5G14610.6 | 38.765 | 405 | 228 | 7 | 132 | 530 | 149 | 539 | 8.11e-86 | 280 |
Msa0069420 | AT5G14610.2 | 38.765 | 405 | 228 | 7 | 132 | 530 | 149 | 539 | 9.42e-86 | 280 |
Msa0069420 | AT5G14610.5 | 38.765 | 405 | 228 | 7 | 132 | 530 | 157 | 547 | 1.61e-85 | 280 |
Msa0069420 | AT3G06480.1 | 39.709 | 413 | 231 | 7 | 123 | 530 | 414 | 813 | 1.55e-80 | 274 |
Msa0069420 | AT1G31970.1 | 38.462 | 416 | 220 | 12 | 127 | 523 | 95 | 493 | 4.35e-80 | 262 |
Msa0069420 | AT5G14610.1 | 37.440 | 414 | 237 | 8 | 125 | 530 | 208 | 607 | 1.77e-78 | 262 |
Msa0069420 | AT5G14610.7 | 39.050 | 379 | 211 | 7 | 158 | 530 | 44 | 408 | 1.89e-78 | 257 |
Msa0069420 | AT5G14610.3 | 39.050 | 379 | 211 | 7 | 158 | 530 | 44 | 408 | 1.89e-78 | 257 |
Msa0069420 | AT3G09620.1 | 34.581 | 454 | 245 | 9 | 115 | 560 | 367 | 776 | 6.78e-75 | 258 |
Msa0069420 | AT3G09620.2 | 34.581 | 454 | 245 | 9 | 115 | 560 | 368 | 777 | 7.35e-75 | 257 |
Msa0069420 | AT5G63120.1 | 39.828 | 349 | 196 | 6 | 115 | 459 | 136 | 474 | 7.45e-73 | 241 |
Msa0069420 | AT5G63120.3 | 39.828 | 349 | 196 | 6 | 115 | 459 | 136 | 474 | 1.00e-72 | 241 |
Msa0069420 | AT5G63120.4 | 39.828 | 349 | 196 | 6 | 115 | 459 | 136 | 474 | 1.00e-72 | 241 |
Msa0069420 | AT5G63120.5 | 39.828 | 349 | 196 | 6 | 115 | 459 | 136 | 474 | 1.00e-72 | 241 |
Msa0069420 | AT1G28180.1 | 38.375 | 357 | 207 | 5 | 174 | 527 | 3 | 349 | 2.38e-71 | 234 |
Msa0069420 | AT1G77030.1 | 34.010 | 394 | 242 | 6 | 146 | 535 | 30 | 409 | 1.80e-65 | 229 |
Msa0069420 | AT5G14610.4 | 35.754 | 358 | 211 | 6 | 128 | 479 | 153 | 497 | 8.02e-65 | 221 |
Msa0069420 | AT5G60990.1 | 33.867 | 375 | 236 | 4 | 137 | 505 | 2 | 370 | 1.12e-64 | 219 |
Msa0069420 | AT1G16280.1 | 33.257 | 436 | 255 | 11 | 145 | 567 | 59 | 471 | 1.52e-64 | 219 |
Msa0069420 | AT3G02065.3 | 32.220 | 419 | 266 | 7 | 119 | 529 | 83 | 491 | 7.02e-64 | 218 |
Msa0069420 | AT3G02065.2 | 32.220 | 419 | 266 | 7 | 119 | 529 | 83 | 491 | 7.02e-64 | 218 |
Msa0069420 | AT3G09720.2 | 33.488 | 430 | 254 | 11 | 111 | 529 | 105 | 513 | 8.45e-62 | 214 |
Msa0069420 | AT3G09720.1 | 33.488 | 430 | 254 | 11 | 111 | 529 | 105 | 513 | 8.45e-62 | 214 |
Msa0069420 | AT3G06480.2 | 38.286 | 350 | 199 | 6 | 124 | 468 | 415 | 752 | 2.31e-61 | 217 |
Msa0069420 | AT4G16630.1 | 33.824 | 408 | 237 | 9 | 145 | 536 | 168 | 558 | 4.95e-61 | 216 |
Msa0069420 | AT3G22330.1 | 35.311 | 354 | 214 | 7 | 155 | 504 | 115 | 457 | 1.61e-60 | 212 |
Msa0069420 | AT5G26742.1 | 32.990 | 388 | 220 | 6 | 135 | 506 | 98 | 461 | 1.83e-58 | 209 |
Msa0069420 | AT5G26742.2 | 32.990 | 388 | 220 | 6 | 135 | 506 | 98 | 461 | 1.86e-58 | 209 |
Msa0069420 | AT3G22310.2 | 34.626 | 361 | 221 | 7 | 148 | 504 | 120 | 469 | 7.02e-58 | 204 |
Msa0069420 | AT3G22310.1 | 34.626 | 361 | 221 | 7 | 148 | 504 | 120 | 469 | 9.14e-58 | 204 |
Msa0069420 | AT5G65900.1 | 33.428 | 353 | 214 | 7 | 144 | 488 | 154 | 493 | 8.22e-57 | 202 |
Msa0069420 | AT3G13920.3 | 30.513 | 390 | 252 | 8 | 144 | 530 | 29 | 402 | 2.01e-56 | 196 |
Msa0069420 | AT3G13920.1 | 30.513 | 390 | 252 | 8 | 144 | 530 | 39 | 412 | 2.37e-56 | 196 |
Msa0069420 | AT1G51380.1 | 31.122 | 392 | 248 | 6 | 142 | 530 | 20 | 392 | 2.98e-56 | 195 |
Msa0069420 | AT3G18600.1 | 33.425 | 362 | 226 | 6 | 131 | 488 | 77 | 427 | 1.37e-55 | 197 |
Msa0069420 | AT5G26742.3 | 32.115 | 383 | 224 | 6 | 179 | 545 | 44 | 406 | 1.54e-55 | 199 |
Msa0069420 | AT3G13920.4 | 31.183 | 372 | 237 | 8 | 162 | 530 | 52 | 407 | 3.14e-55 | 192 |
Msa0069420 | AT3G19760.1 | 30.964 | 394 | 249 | 7 | 142 | 530 | 33 | 408 | 5.07e-55 | 192 |
Msa0069420 | AT3G13920.2 | 30.130 | 385 | 251 | 7 | 144 | 525 | 39 | 408 | 2.64e-54 | 190 |
Msa0069420 | AT3G13920.5 | 30.130 | 385 | 251 | 7 | 144 | 525 | 43 | 412 | 3.53e-54 | 190 |
Msa0069420 | AT1G72730.1 | 29.820 | 389 | 254 | 8 | 145 | 530 | 42 | 414 | 3.90e-54 | 190 |
Msa0069420 | AT1G54270.1 | 30.612 | 392 | 249 | 8 | 144 | 530 | 39 | 412 | 4.91e-53 | 187 |
Msa0069420 | AT1G71370.1 | 32.086 | 374 | 232 | 9 | 139 | 499 | 9 | 373 | 5.40e-53 | 190 |
Msa0069420 | AT3G02065.1 | 31.593 | 364 | 233 | 6 | 172 | 529 | 1 | 354 | 6.53e-53 | 185 |
Msa0069420 | AT1G54270.2 | 31.283 | 374 | 234 | 8 | 162 | 530 | 52 | 407 | 9.29e-52 | 183 |
Msa0069420 | AT5G62190.1 | 32.283 | 381 | 234 | 9 | 140 | 510 | 95 | 461 | 5.57e-51 | 186 |
Msa0069420 | AT2G45810.1 | 30.618 | 356 | 231 | 4 | 146 | 500 | 156 | 496 | 7.69e-50 | 181 |
Msa0069420 | AT5G05450.1 | 30.990 | 384 | 227 | 10 | 144 | 499 | 9 | 382 | 9.38e-50 | 182 |
Msa0069420 | AT3G61240.2 | 30.337 | 356 | 230 | 5 | 146 | 499 | 126 | 465 | 1.33e-49 | 179 |
Msa0069420 | AT3G61240.1 | 30.337 | 356 | 230 | 5 | 146 | 499 | 126 | 465 | 1.33e-49 | 179 |
Msa0069420 | AT4G00660.1 | 29.737 | 380 | 250 | 5 | 146 | 524 | 133 | 496 | 1.46e-49 | 179 |
Msa0069420 | AT4G00660.2 | 29.737 | 380 | 250 | 5 | 146 | 524 | 133 | 496 | 1.46e-49 | 179 |
Msa0069420 | AT5G11170.1 | 30.789 | 380 | 231 | 11 | 134 | 499 | 31 | 392 | 2.94e-48 | 174 |
Msa0069420 | AT5G11200.1 | 30.789 | 380 | 231 | 11 | 134 | 499 | 31 | 392 | 2.94e-48 | 174 |
Msa0069420 | AT2G40700.1 | 29.710 | 414 | 205 | 10 | 163 | 499 | 50 | 454 | 1.11e-46 | 174 |
Msa0069420 | AT1G12770.2 | 27.725 | 422 | 242 | 9 | 138 | 503 | 101 | 515 | 2.97e-45 | 169 |
Msa0069420 | AT1G12770.1 | 27.725 | 422 | 242 | 9 | 138 | 503 | 101 | 515 | 2.97e-45 | 169 |
Msa0069420 | AT5G54910.1 | 33.075 | 387 | 230 | 12 | 143 | 519 | 70 | 437 | 8.26e-44 | 167 |
Msa0069420 | AT5G63630.1 | 31.429 | 350 | 223 | 6 | 156 | 493 | 66 | 410 | 1.31e-43 | 163 |
Msa0069420 | AT5G11170.2 | 32.209 | 326 | 194 | 10 | 183 | 499 | 2 | 309 | 1.89e-43 | 159 |
Msa0069420 | AT5G11200.3 | 28.637 | 433 | 233 | 14 | 134 | 510 | 31 | 443 | 4.29e-43 | 161 |
Msa0069420 | AT5G63630.2 | 31.429 | 350 | 223 | 6 | 156 | 493 | 260 | 604 | 1.03e-42 | 164 |
Msa0069420 | AT2G07750.1 | 31.281 | 406 | 243 | 10 | 111 | 493 | 340 | 732 | 1.18e-42 | 164 |
Msa0069420 | AT5G08610.1 | 32.022 | 356 | 213 | 7 | 156 | 493 | 394 | 738 | 2.16e-42 | 163 |
Msa0069420 | AT4G09730.1 | 28.646 | 384 | 232 | 10 | 143 | 501 | 111 | 477 | 7.05e-42 | 160 |
Msa0069420 | AT5G11200.2 | 28.082 | 438 | 226 | 13 | 134 | 499 | 31 | 451 | 1.48e-41 | 157 |
Msa0069420 | AT1G63250.1 | 31.116 | 421 | 255 | 12 | 156 | 556 | 340 | 745 | 1.80e-41 | 160 |
Msa0069420 | AT5G08620.1 | 30.806 | 422 | 254 | 13 | 156 | 556 | 92 | 496 | 5.26e-41 | 157 |
Msa0069420 | AT1G71280.2 | 30.838 | 334 | 190 | 10 | 137 | 463 | 11 | 310 | 1.73e-37 | 142 |
Msa0069420 | AT3G53110.1 | 29.319 | 382 | 233 | 13 | 133 | 493 | 80 | 445 | 5.48e-37 | 144 |
Msa0069420 | AT1G71280.1 | 30.473 | 338 | 194 | 10 | 137 | 467 | 11 | 314 | 7.96e-37 | 143 |
Msa0069420 | AT4G34910.1 | 28.101 | 395 | 225 | 10 | 144 | 489 | 46 | 430 | 5.01e-33 | 134 |
Msa0069420 | AT3G06980.1 | 28.460 | 383 | 238 | 13 | 144 | 499 | 374 | 747 | 5.73e-33 | 135 |
Msa0069420 | AT3G16840.1 | 27.209 | 430 | 232 | 11 | 146 | 504 | 192 | 611 | 7.58e-32 | 131 |
Msa0069420 | AT3G16840.2 | 27.209 | 430 | 232 | 11 | 146 | 504 | 193 | 612 | 7.59e-32 | 131 |
Msa0069420 | AT1G51380.2 | 29.044 | 272 | 175 | 5 | 142 | 410 | 20 | 276 | 2.42e-28 | 115 |
Msa0069420 | AT5G19210.2 | 26.579 | 380 | 243 | 11 | 134 | 488 | 66 | 434 | 1.78e-27 | 116 |
Msa0069420 | AT1G51380.4 | 30.093 | 216 | 137 | 2 | 142 | 357 | 20 | 221 | 1.28e-25 | 107 |
Msa0069420 | AT1G51380.3 | 30.093 | 216 | 137 | 2 | 142 | 357 | 20 | 221 | 1.95e-25 | 107 |
Msa0069420 | AT4G15850.1 | 25.182 | 413 | 233 | 12 | 157 | 503 | 44 | 446 | 2.42e-23 | 104 |
Msa0069420 | AT5G19210.1 | 26.180 | 233 | 148 | 7 | 279 | 488 | 46 | 277 | 3.19e-16 | 80.5 |
Msa0069420 | AT5G19210.3 | 26.180 | 233 | 148 | 7 | 279 | 488 | 46 | 277 | 3.19e-16 | 80.5 |
Msa0069420 | AT1G28180.2 | 36.885 | 122 | 71 | 1 | 174 | 295 | 3 | 118 | 5.13e-15 | 72.0 |
Msa0069420 | AT1G27880.2 | 23.955 | 359 | 228 | 12 | 171 | 513 | 274 | 603 | 2.71e-12 | 70.5 |
Msa0069420 | AT1G27880.1 | 23.955 | 359 | 228 | 12 | 171 | 513 | 274 | 603 | 2.93e-12 | 70.5 |
Msa0069420 | AT4G35740.1 | 20.800 | 375 | 241 | 13 | 140 | 488 | 5 | 349 | 3.65e-12 | 69.7 |
Find 180 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTAGCAAAGTTCTGAATTT+TGG | 0.149090 | 1_2:-37873313 | None:intergenic |
AATAATAGAAAGGATTATTT+TGG | 0.164744 | 1_2:+37874005 | Msa0069420:CDS |
GTATGCCATTTCATCATTTA+AGG | 0.167719 | 1_2:+37873590 | Msa0069420:CDS |
TAAACACTAGTGCAAATATT+AGG | 0.199451 | 1_2:-37874155 | None:intergenic |
CTCTTCTGATGTTCTAATTT+AGG | 0.202029 | 1_2:-37873969 | None:intergenic |
TCTTCTTTGCTCTTCAATTC+AGG | 0.263833 | 1_2:+37872102 | Msa0069420:five_prime_UTR |
AATCAAATCACAATCCTTCT+TGG | 0.269532 | 1_2:-37872641 | None:intergenic |
CGTCCCACGTTGACAATAAT+AGG | 0.275578 | 1_2:-37873351 | None:intergenic |
ATATCCTTAAAATTCTTAAT+CGG | 0.278731 | 1_2:-37872709 | None:intergenic |
GGCTGATCGATTGGTCGATT+TGG | 0.290280 | 1_2:+37873209 | Msa0069420:CDS |
GGCAAATCTTGATGTTATTC+AGG | 0.295497 | 1_2:+37873383 | Msa0069420:CDS |
TTTGATAATAATAGAATGTT+TGG | 0.297253 | 1_2:+37874271 | Msa0069420:three_prime_UTR |
GAGAGTGAGTTGCAGGGTTT+TGG | 0.299248 | 1_2:-37872054 | None:intergenic |
GCTGATCGATTGGTCGATTT+GGG | 0.307880 | 1_2:+37873210 | Msa0069420:CDS |
CATATAGTTGTTGCTACTCC+TGG | 0.309941 | 1_2:+37873117 | Msa0069420:CDS |
CAGTGGCATATAATTGTTAA+TGG | 0.312190 | 1_2:+37872670 | Msa0069420:CDS |
TAATATTTGCACTAGTGTTT+AGG | 0.313391 | 1_2:+37874157 | Msa0069420:three_prime_UTR |
TGTGCAGCCAACGCCTATTC+AGG | 0.330764 | 1_2:+37872777 | Msa0069420:CDS |
TTGATGACATGTTGAATATC+AGG | 0.337184 | 1_2:-37873669 | None:intergenic |
TGTGCATATTGTGGCGGGCT+TGG | 0.337993 | 1_2:+37873927 | Msa0069420:CDS |
ATTATGATGCCGATTGTTCC+TGG | 0.348651 | 1_2:+37872916 | Msa0069420:CDS |
TCCCTCCCAGATAAAATAAC+TGG | 0.356395 | 1_2:-37872811 | None:intergenic |
AGCTTCCATGGCGCGACGCT+TGG | 0.358137 | 1_2:-37872326 | None:intergenic |
TATACTGAGCCTTTGCCTAC+TGG | 0.358544 | 1_2:+37872586 | Msa0069420:CDS |
TATTTGTCCGTCAAGGGAAT+TGG | 0.365662 | 1_2:+37872960 | Msa0069420:CDS |
TTGGCATAGTAGCAGAAAAT+AGG | 0.371521 | 1_2:-37873290 | None:intergenic |
TTCTCACAAAATATAAGAAC+AGG | 0.372394 | 1_2:-37873474 | None:intergenic |
TATCCTTAAAATTCTTAATC+GGG | 0.374649 | 1_2:-37872708 | None:intergenic |
GGTTCGCGAGAGTGAGTTGC+AGG | 0.376318 | 1_2:-37872061 | None:intergenic |
AAACACTAGTGCAAATATTA+GGG | 0.381389 | 1_2:-37874154 | None:intergenic |
ATCAGGAAAATCTAAACCTT+TGG | 0.383694 | 1_2:-37873652 | None:intergenic |
AGTAGTATTCTAAGAAAATC+TGG | 0.387012 | 1_2:-37874187 | None:intergenic |
TCAACCAGCTCAGCCAAAAC+AGG | 0.388073 | 1_2:-37873855 | None:intergenic |
GAATTCAGTGGTAGCAATAA+TGG | 0.392278 | 1_2:+37872267 | Msa0069420:intron |
ACCGGAAGATGTGGCAAAAC+TGG | 0.393311 | 1_2:+37873741 | Msa0069420:CDS |
TCCAGCCTTAAATGATGAAA+TGG | 0.394298 | 1_2:-37873595 | None:intergenic |
GAACTTTGCTAGAAGTGCTT+TGG | 0.398689 | 1_2:+37873323 | Msa0069420:CDS |
GGAAGACCCTGCACCTGAAT+AGG | 0.399752 | 1_2:-37872790 | None:intergenic |
TGCCTAGCCAATTCCCTTGA+CGG | 0.400861 | 1_2:-37872967 | None:intergenic |
GAAAATTATGTCCATAGGAT+TGG | 0.415181 | 1_2:+37873714 | Msa0069420:CDS |
ATTTCTTCATTATCTTCCAT+TGG | 0.416148 | 1_2:-37873879 | None:intergenic |
GTGGAAGCCGTGGCTATTCA+TGG | 0.417643 | 1_2:+37873543 | Msa0069420:CDS |
CTCAGGCCTTTGCTTTGTAT+CGG | 0.425118 | 1_2:+37873048 | Msa0069420:CDS |
ACCAGTACAGGTATTCAGTA+TGG | 0.429808 | 1_2:-37874245 | None:intergenic |
TAAGCCAAGTCTACTTGTTA+AGG | 0.431259 | 1_2:+37872429 | Msa0069420:CDS |
ATTGTCAACGTGGGACGTGC+AGG | 0.433086 | 1_2:+37873357 | Msa0069420:CDS |
ATGGCGCGACGCTTGGCCAC+AGG | 0.433274 | 1_2:-37872319 | None:intergenic |
CAAGCAATGTTGTCTCACTT+TGG | 0.433879 | 1_2:-37873791 | None:intergenic |
AACATCTTCAAAATCGGATC+CGG | 0.439066 | 1_2:-37872739 | None:intergenic |
ATACTGAGCCTTTGCCTACT+GGG | 0.441611 | 1_2:+37872587 | Msa0069420:CDS |
GGAAGAAGAAGATGATTATG+AGG | 0.447944 | 1_2:+37872288 | Msa0069420:CDS |
TTGTTACCTTTGAAGGAAGC+TGG | 0.448833 | 1_2:+37873015 | Msa0069420:CDS |
CTAATTCACGAACCGACATA+AGG | 0.449435 | 1_2:-37872549 | None:intergenic |
TCTGTTTAGCTTCTTGCAAA+AGG | 0.453849 | 1_2:-37873824 | None:intergenic |
GCCATTTCATCATTTAAGGC+TGG | 0.454604 | 1_2:+37873594 | Msa0069420:CDS |
GTTCCTGGGGAAGGTCCGTT+TGG | 0.454718 | 1_2:+37872931 | Msa0069420:CDS |
TTCCGGTACGTCCAATCCTA+TGG | 0.458107 | 1_2:-37873725 | None:intergenic |
CTGGTTGATTCAGCGTAGTC+TGG | 0.458573 | 1_2:+37874318 | Msa0069420:three_prime_UTR |
ATCCTTTCTATTATTTGCAA+TGG | 0.461654 | 1_2:-37873997 | None:intergenic |
TGCTACTCCTGGGAGGTTGA+AGG | 0.465424 | 1_2:+37873128 | Msa0069420:CDS |
TACGGGTTCTGGTAAAACTT+TGG | 0.465912 | 1_2:+37872852 | Msa0069420:CDS |
TTTGAAGGAAGCTGGATATC+CGG | 0.466679 | 1_2:+37873023 | Msa0069420:CDS |
GCCAACGCCTATTCAGGTGC+AGG | 0.470151 | 1_2:+37872783 | Msa0069420:CDS |
TAATTCACGAACCGACATAA+GGG | 0.473252 | 1_2:-37872548 | None:intergenic |
ATATAGTTGTTGCTACTCCT+GGG | 0.476403 | 1_2:+37873118 | Msa0069420:CDS |
AAGCTGGATATCCGGAGCTC+AGG | 0.476787 | 1_2:+37873031 | Msa0069420:CDS |
CATGAGTATCTTCTCTTGAA+AGG | 0.476814 | 1_2:+37873519 | Msa0069420:CDS |
TTATCTGGGAGGGATATGAT+TGG | 0.476899 | 1_2:+37872820 | Msa0069420:CDS |
CGTTGGCTGCACAATCCCCT+TGG | 0.477106 | 1_2:-37872767 | None:intergenic |
TATTCATGGAGGCAAGGATC+AGG | 0.479994 | 1_2:+37873557 | Msa0069420:CDS |
CTCAGTATAAGTAATCCCTT+TGG | 0.481450 | 1_2:-37872572 | None:intergenic |
GTCTGATTATTTGTCCGTCA+AGG | 0.482454 | 1_2:+37872953 | Msa0069420:CDS |
TGTTCTGTGACACTGATCTC+AGG | 0.482801 | 1_2:-37872475 | None:intergenic |
AAGATGGAGTAGACGACGCT+AGG | 0.484782 | 1_2:-37872083 | None:intergenic |
AAACGAGAGCAGAAGGCATC+GGG | 0.491558 | 1_2:-37874354 | None:intergenic |
TAAATGTTGCAGATAGTACA+TGG | 0.493682 | 1_2:-37874213 | None:intergenic |
GGACCTTCCCCAGGAACAAT+CGG | 0.494587 | 1_2:-37872925 | None:intergenic |
TGTGGCCAAGCGTCGCGCCA+TGG | 0.495459 | 1_2:+37872321 | Msa0069420:CDS |
GAAGAAATCACAGGCATAAG+TGG | 0.497165 | 1_2:+37873894 | Msa0069420:CDS |
GGAGATGATTGAGAATTTGT+CGG | 0.499681 | 1_2:+37872516 | Msa0069420:CDS |
GATGATTATGATGGCAATGC+AGG | 0.503462 | 1_2:+37872888 | Msa0069420:CDS |
TTGAAGATGTTGAAAACCAA+GGG | 0.508448 | 1_2:+37872751 | Msa0069420:CDS |
AGGAATGTAATTAGATTTCA+CGG | 0.512566 | 1_2:-37874131 | None:intergenic |
CAAAGCAAAGGCCTGAGCTC+CGG | 0.515925 | 1_2:-37873042 | None:intergenic |
TGTGCTTCCGATGATTATGA+TGG | 0.517107 | 1_2:+37872879 | Msa0069420:CDS |
TTATGATGCCGATTGTTCCT+GGG | 0.517162 | 1_2:+37872917 | Msa0069420:CDS |
ATGCCGATTGTTCCTGGGGA+AGG | 0.520774 | 1_2:+37872922 | Msa0069420:CDS |
ATCCTTAAAATTCTTAATCG+GGG | 0.521926 | 1_2:-37872707 | None:intergenic |
AGGCCTTTGCTTTGTATCGG+TGG | 0.524480 | 1_2:+37873051 | Msa0069420:CDS |
GGCCATTGCAAATAATAGAA+AGG | 0.524636 | 1_2:+37873995 | Msa0069420:CDS |
AAAACGAGAGCAGAAGGCAT+CGG | 0.525075 | 1_2:-37874355 | None:intergenic |
GCAACTGATGTTGCATCCAA+AGG | 0.525642 | 1_2:+37873636 | Msa0069420:CDS |
ATTAGATGAGGCTGATCGAT+TGG | 0.526285 | 1_2:+37873200 | Msa0069420:CDS |
AGGGGAAATTTGAAAGCTGT+TGG | 0.527095 | 1_2:+37874043 | Msa0069420:exon |
ATTATCAAAAGCACCAGTAC+AGG | 0.530499 | 1_2:-37874257 | None:intergenic |
GGATATCCAGCTTCCTTCAA+AGG | 0.531513 | 1_2:-37873021 | None:intergenic |
GGCTGAGCTGGTTGATCCAA+TGG | 0.532926 | 1_2:+37873863 | Msa0069420:CDS |
CACAGGCATAAGTGGTGTCA+AGG | 0.533189 | 1_2:+37873902 | Msa0069420:CDS |
GTCCGTCAAGGGAATTGGCT+AGG | 0.535331 | 1_2:+37872965 | Msa0069420:CDS |
GAATTGAAGAGCAAAGAAGA+TGG | 0.535490 | 1_2:-37872099 | None:intergenic |
TTGTCAACGTGGGACGTGCA+GGG | 0.538691 | 1_2:+37873358 | Msa0069420:CDS |
AAATTGAAAATTATGTCCAT+AGG | 0.540038 | 1_2:+37873709 | Msa0069420:CDS |
GCAGCTTGAGATTGTCAAGA+AGG | 0.540887 | 1_2:+37873089 | Msa0069420:CDS |
TTTGAAGATGTTGAAAACCA+AGG | 0.541708 | 1_2:+37872750 | Msa0069420:CDS |
AGAAGATTCTACAACGCAAA+GGG | 0.543952 | 1_2:+37872350 | Msa0069420:CDS |
GTCCATAGGATTGGACGTAC+CGG | 0.544392 | 1_2:+37873723 | Msa0069420:CDS |
CGGTTCGTGAATTAGCCAAA+GGG | 0.544464 | 1_2:+37872557 | Msa0069420:CDS |
AGGGCTGTGCATATTGTGGC+GGG | 0.545255 | 1_2:+37873922 | Msa0069420:CDS |
AACATATCCTTCAACCTCCC+AGG | 0.545633 | 1_2:-37873135 | None:intergenic |
CCCTGCACCTGAATAGGCGT+TGG | 0.547462 | 1_2:-37872784 | None:intergenic |
TAGAATCTTCTGAGCTTCCA+TGG | 0.548818 | 1_2:-37872338 | None:intergenic |
TCTGATTATTTGTCCGTCAA+GGG | 0.548890 | 1_2:+37872954 | Msa0069420:CDS |
GACATCCTTCTTATATGCAA+AGG | 0.550532 | 1_2:-37872619 | None:intergenic |
ACAGATTGTTCAACAAGAGA+AGG | 0.551879 | 1_2:+37872495 | Msa0069420:CDS |
AGCCTCCTTTGCATATAAGA+AGG | 0.556618 | 1_2:+37872614 | Msa0069420:CDS |
TTGATCACTTCAAAGCTCAA+AGG | 0.557864 | 1_2:+37873259 | Msa0069420:CDS |
ACCATACTGAATACCTGTAC+TGG | 0.559604 | 1_2:+37874244 | Msa0069420:three_prime_UTR |
GATGCCTTAACAAGTAGACT+TGG | 0.560699 | 1_2:-37872433 | None:intergenic |
TGGGAGGTTGAAGGATATGT+TGG | 0.560706 | 1_2:+37873137 | Msa0069420:CDS |
CAACGTGGGACGTGCAGGGG+CGG | 0.562763 | 1_2:+37873362 | Msa0069420:CDS |
TGCATTGCCATCATAATCAT+CGG | 0.564463 | 1_2:-37872886 | None:intergenic |
GGCTTCCACCCAGTAGGCAA+AGG | 0.565662 | 1_2:-37872595 | None:intergenic |
GGACAAATAATCAGACCAAA+CGG | 0.567574 | 1_2:-37872946 | None:intergenic |
GGCTGGAAAGAAAGATGTGT+TGG | 0.568095 | 1_2:+37873611 | Msa0069420:CDS |
TGGCGCGACGCTTGGCCACA+GGG | 0.572510 | 1_2:-37872318 | None:intergenic |
TGTCAACGTGGGACGTGCAG+GGG | 0.573588 | 1_2:+37873359 | Msa0069420:CDS |
AGATGGAGTAGACGACGCTA+GGG | 0.573825 | 1_2:-37872082 | None:intergenic |
GTGATTTGATTCAGAAACAG+TGG | 0.579699 | 1_2:+37872653 | Msa0069420:CDS |
GTTCTAATTTAGGACAATCA+CGG | 0.582056 | 1_2:-37873959 | None:intergenic |
CAGCTTGAGATTGTCAAGAA+GGG | 0.585138 | 1_2:+37873090 | Msa0069420:CDS |
CAACCAGCTCAGCCAAAACA+GGG | 0.585303 | 1_2:-37873854 | None:intergenic |
AAGGGCTGTGCATATTGTGG+CGG | 0.588782 | 1_2:+37873921 | Msa0069420:CDS |
TTGGATCTGGAGGTTACCGA+GGG | 0.589965 | 1_2:+37874024 | Msa0069420:CDS |
AAAAGACAAATTAGTAAACA+AGG | 0.591451 | 1_2:-37874068 | None:intergenic |
TATAAGAAGGATGTCCAAGA+AGG | 0.594230 | 1_2:+37872627 | Msa0069420:CDS |
GTCAAGGGCTGTGCATATTG+TGG | 0.594696 | 1_2:+37873918 | Msa0069420:CDS |
GAAGATAATGAAGAAATCAC+AGG | 0.595506 | 1_2:+37873885 | Msa0069420:CDS |
TAGGTATTTAACATTAGATG+AGG | 0.597304 | 1_2:+37873188 | Msa0069420:CDS |
ACAGGCATAAGTGGTGTCAA+GGG | 0.600892 | 1_2:+37873903 | Msa0069420:CDS |
AGACCAAACGGACCTTCCCC+AGG | 0.602098 | 1_2:-37872934 | None:intergenic |
TCCTTAAAATTCTTAATCGG+GGG | 0.602509 | 1_2:-37872706 | None:intergenic |
ATCCTTCTTATATGCAAAGG+AGG | 0.604908 | 1_2:-37872616 | None:intergenic |
ATTGGACGTACCGGAAGATG+TGG | 0.605046 | 1_2:+37873732 | Msa0069420:CDS |
ACAGCTTTCAAATTTCCCCT+CGG | 0.605453 | 1_2:-37874040 | None:intergenic |
AAATGAATCTTGATAACTGT+AGG | 0.605954 | 1_2:+37873169 | Msa0069420:CDS |
CAGAAGATTCTACAACGCAA+AGG | 0.606512 | 1_2:+37872349 | Msa0069420:CDS |
TCGGTTCGTGAATTAGCCAA+AGG | 0.607239 | 1_2:+37872556 | Msa0069420:CDS |
TATGATGCCGATTGTTCCTG+GGG | 0.607823 | 1_2:+37872918 | Msa0069420:CDS |
CGTGGCTATTCATGGAGGCA+AGG | 0.609440 | 1_2:+37873551 | Msa0069420:CDS |
TTTGGATCTGGAGGTTACCG+AGG | 0.611360 | 1_2:+37874023 | Msa0069420:CDS |
GTATCTTCTCTTGAAAGGAG+TGG | 0.613245 | 1_2:+37873524 | Msa0069420:CDS |
ACCAGCTCAGCCAAAACAGG+GGG | 0.618612 | 1_2:-37873852 | None:intergenic |
ATCATCTTCTTCGATTGCAG+CGG | 0.619028 | 1_2:-37872380 | None:intergenic |
CCAACGCCTATTCAGGTGCA+GGG | 0.626028 | 1_2:+37872784 | Msa0069420:CDS |
GATTATGATGGCAATGCAGG+AGG | 0.626164 | 1_2:+37872891 | Msa0069420:CDS |
CTTGCCTCCATGAATAGCCA+CGG | 0.627088 | 1_2:-37873550 | None:intergenic |
AAATCTTGATGTTATTCAGG+AGG | 0.630055 | 1_2:+37873386 | Msa0069420:CDS |
CACTAGTGCAAATATTAGGG+AGG | 0.631083 | 1_2:-37874151 | None:intergenic |
GGTAGAGTATGTCAAGCAAG+AGG | 0.633475 | 1_2:+37873407 | Msa0069420:CDS |
ATTAGAACATCAGAAGAGTG+TGG | 0.644869 | 1_2:+37873974 | Msa0069420:CDS |
TAGTTGTTGCTACTCCTGGG+AGG | 0.648311 | 1_2:+37873121 | Msa0069420:CDS |
GGATAAGAAAACCCTTATGT+CGG | 0.648731 | 1_2:+37872537 | Msa0069420:CDS |
GTTCGCGAGAGTGAGTTGCA+GGG | 0.649991 | 1_2:-37872060 | None:intergenic |
TCACAAAATATAAGAACAGG+GGG | 0.651713 | 1_2:-37873471 | None:intergenic |
TCTCACAAAATATAAGAACA+GGG | 0.655996 | 1_2:-37873473 | None:intergenic |
AAATGTTGCAGATAGTACAT+GGG | 0.657525 | 1_2:-37874212 | None:intergenic |
AAAGACAAATTAGTAAACAA+GGG | 0.658022 | 1_2:-37874067 | None:intergenic |
CTGAGCCTTTGCCTACTGGG+TGG | 0.663961 | 1_2:+37872590 | Msa0069420:CDS |
TGAAGATGTTGAAAACCAAG+GGG | 0.665813 | 1_2:+37872752 | Msa0069420:CDS |
AAAGGAGGCTTCCACCCAGT+AGG | 0.671260 | 1_2:-37872601 | None:intergenic |
CTCACAAAATATAAGAACAG+GGG | 0.671503 | 1_2:-37873472 | None:intergenic |
CTTGAAAGGAGTGGAAGCCG+TGG | 0.671745 | 1_2:+37873533 | Msa0069420:CDS |
AAACCTATTATTGTCAACGT+GGG | 0.671996 | 1_2:+37873348 | Msa0069420:CDS |
ATTCCACCGATACAAAGCAA+AGG | 0.681232 | 1_2:-37873054 | None:intergenic |
AACCAGCTCAGCCAAAACAG+GGG | 0.687019 | 1_2:-37873853 | None:intergenic |
AAAACCTATTATTGTCAACG+TGG | 0.694253 | 1_2:+37873347 | Msa0069420:CDS |
GAAGCCGTGGCTATTCATGG+AGG | 0.745575 | 1_2:+37873546 | Msa0069420:CDS |
CCAGCTCAGCCAAAACAGGG+GGG | 0.756991 | 1_2:-37873851 | None:intergenic |
TTATGAGGAGTATATCCCTG+TGG | 0.764837 | 1_2:+37872303 | Msa0069420:CDS |
TGGATCTGGAGGTTACCGAG+GGG | 0.774006 | 1_2:+37874025 | Msa0069420:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATCCTTAAAATTCTTAAT+CGG | - | chr1_2:37872712-37872731 | None:intergenic | 15.0% |
!!! | AATAATAGAAAGGATTATTT+TGG | + | chr1_2:37874005-37874024 | Msa0069420:CDS | 15.0% |
!!! | TTTGATAATAATAGAATGTT+TGG | + | chr1_2:37874271-37874290 | Msa0069420:three_prime_UTR | 15.0% |
!! | ATATCCTTAAAATTCTTAAT+CGG | - | chr1_2:37872712-37872731 | None:intergenic | 15.0% |
!!! | AATAATAGAAAGGATTATTT+TGG | + | chr1_2:37874005-37874024 | Msa0069420:CDS | 15.0% |
!!! | TTTGATAATAATAGAATGTT+TGG | + | chr1_2:37874271-37874290 | Msa0069420:three_prime_UTR | 15.0% |
!! | TATCCTTAAAATTCTTAATC+GGG | - | chr1_2:37872711-37872730 | None:intergenic | 20.0% |
!!! | TTAAGAATTTTAAGGATATG+AGG | + | chr1_2:37872713-37872732 | Msa0069420:CDS | 20.0% |
!!! | TCTTATATTTTGTGAGAATA+AGG | + | chr1_2:37873479-37873498 | Msa0069420:CDS | 20.0% |
!! | AAATTGAAAATTATGTCCAT+AGG | + | chr1_2:37873709-37873728 | Msa0069420:CDS | 20.0% |
!! | AAAGACAAATTAGTAAACAA+GGG | - | chr1_2:37874070-37874089 | None:intergenic | 20.0% |
!! | AAAAGACAAATTAGTAAACA+AGG | - | chr1_2:37874071-37874090 | None:intergenic | 20.0% |
!! | TATCCTTAAAATTCTTAATC+GGG | - | chr1_2:37872711-37872730 | None:intergenic | 20.0% |
!!! | TTAAGAATTTTAAGGATATG+AGG | + | chr1_2:37872713-37872732 | Msa0069420:CDS | 20.0% |
!!! | TCTTATATTTTGTGAGAATA+AGG | + | chr1_2:37873479-37873498 | Msa0069420:CDS | 20.0% |
!! | AAATTGAAAATTATGTCCAT+AGG | + | chr1_2:37873709-37873728 | Msa0069420:CDS | 20.0% |
!! | AAAGACAAATTAGTAAACAA+GGG | - | chr1_2:37874070-37874089 | None:intergenic | 20.0% |
!! | AAAAGACAAATTAGTAAACA+AGG | - | chr1_2:37874071-37874090 | None:intergenic | 20.0% |
!! | ACAGTTTTTATTGAATTCAG+TGG | + | chr1_2:37872255-37872274 | Msa0069420:intron | 25.0% |
! | ATCCTTAAAATTCTTAATCG+GGG | - | chr1_2:37872710-37872729 | None:intergenic | 25.0% |
!! | GTTTTCAACATCTTCAAAAT+CGG | - | chr1_2:37872748-37872767 | None:intergenic | 25.0% |
!!! | TATGATTGGAATTGCTTTTA+CGG | + | chr1_2:37872834-37872853 | Msa0069420:CDS | 25.0% |
!! | AGAATTTTTGTTACCTTTGA+AGG | + | chr1_2:37873008-37873027 | Msa0069420:CDS | 25.0% |
!! | ATCAAGATTCATTTTCTTCT+TGG | - | chr1_2:37873163-37873182 | None:intergenic | 25.0% |
!! | AAATGAATCTTGATAACTGT+AGG | + | chr1_2:37873169-37873188 | Msa0069420:CDS | 25.0% |
! | TAGGTATTTAACATTAGATG+AGG | + | chr1_2:37873188-37873207 | Msa0069420:CDS | 25.0% |
! | TCTCACAAAATATAAGAACA+GGG | - | chr1_2:37873476-37873495 | None:intergenic | 25.0% |
! | TTCTCACAAAATATAAGAAC+AGG | - | chr1_2:37873477-37873496 | None:intergenic | 25.0% |
!! | ACATAATTTTCAATTTCAGC+TGG | - | chr1_2:37873705-37873724 | None:intergenic | 25.0% |
! | ATTTCTTCATTATCTTCCAT+TGG | - | chr1_2:37873882-37873901 | None:intergenic | 25.0% |
! | ATCCTTTCTATTATTTGCAA+TGG | - | chr1_2:37874000-37874019 | None:intergenic | 25.0% |
!! | AATTTGTCTTTTAATGCTTC+TGG | + | chr1_2:37874079-37874098 | Msa0069420:three_prime_UTR | 25.0% |
! | AGGAATGTAATTAGATTTCA+CGG | - | chr1_2:37874134-37874153 | None:intergenic | 25.0% |
! | AAACACTAGTGCAAATATTA+GGG | - | chr1_2:37874157-37874176 | None:intergenic | 25.0% |
! | TAAACACTAGTGCAAATATT+AGG | - | chr1_2:37874158-37874177 | None:intergenic | 25.0% |
! | TAATATTTGCACTAGTGTTT+AGG | + | chr1_2:37874157-37874176 | Msa0069420:three_prime_UTR | 25.0% |
!! | AGTAGTATTCTAAGAAAATC+TGG | - | chr1_2:37874190-37874209 | None:intergenic | 25.0% |
!! | AGATTTTCTTAGAATACTAC+TGG | + | chr1_2:37874189-37874208 | Msa0069420:three_prime_UTR | 25.0% |
!! | ACAGTTTTTATTGAATTCAG+TGG | + | chr1_2:37872255-37872274 | Msa0069420:intron | 25.0% |
! | ATCCTTAAAATTCTTAATCG+GGG | - | chr1_2:37872710-37872729 | None:intergenic | 25.0% |
!! | GTTTTCAACATCTTCAAAAT+CGG | - | chr1_2:37872748-37872767 | None:intergenic | 25.0% |
!!! | TATGATTGGAATTGCTTTTA+CGG | + | chr1_2:37872834-37872853 | Msa0069420:CDS | 25.0% |
!! | AGAATTTTTGTTACCTTTGA+AGG | + | chr1_2:37873008-37873027 | Msa0069420:CDS | 25.0% |
!! | ATCAAGATTCATTTTCTTCT+TGG | - | chr1_2:37873163-37873182 | None:intergenic | 25.0% |
!! | AAATGAATCTTGATAACTGT+AGG | + | chr1_2:37873169-37873188 | Msa0069420:CDS | 25.0% |
! | TAGGTATTTAACATTAGATG+AGG | + | chr1_2:37873188-37873207 | Msa0069420:CDS | 25.0% |
! | TCTCACAAAATATAAGAACA+GGG | - | chr1_2:37873476-37873495 | None:intergenic | 25.0% |
! | TTCTCACAAAATATAAGAAC+AGG | - | chr1_2:37873477-37873496 | None:intergenic | 25.0% |
!! | ACATAATTTTCAATTTCAGC+TGG | - | chr1_2:37873705-37873724 | None:intergenic | 25.0% |
! | ATTTCTTCATTATCTTCCAT+TGG | - | chr1_2:37873882-37873901 | None:intergenic | 25.0% |
! | ATCCTTTCTATTATTTGCAA+TGG | - | chr1_2:37874000-37874019 | None:intergenic | 25.0% |
!! | AATTTGTCTTTTAATGCTTC+TGG | + | chr1_2:37874079-37874098 | Msa0069420:three_prime_UTR | 25.0% |
! | AGGAATGTAATTAGATTTCA+CGG | - | chr1_2:37874134-37874153 | None:intergenic | 25.0% |
! | AAACACTAGTGCAAATATTA+GGG | - | chr1_2:37874157-37874176 | None:intergenic | 25.0% |
! | TAAACACTAGTGCAAATATT+AGG | - | chr1_2:37874158-37874177 | None:intergenic | 25.0% |
! | TAATATTTGCACTAGTGTTT+AGG | + | chr1_2:37874157-37874176 | Msa0069420:three_prime_UTR | 25.0% |
!! | AGTAGTATTCTAAGAAAATC+TGG | - | chr1_2:37874190-37874209 | None:intergenic | 25.0% |
!! | AGATTTTCTTAGAATACTAC+TGG | + | chr1_2:37874189-37874208 | Msa0069420:three_prime_UTR | 25.0% |
! | ATCCATCTTCCTTGTATTTT+CGG | + | chr1_2:37872130-37872149 | Msa0069420:intron | 30.0% |
TAGAATGAACCGAAAATACA+AGG | - | chr1_2:37872142-37872161 | None:intergenic | 30.0% | |
TCCTCTGCAAATTGAAAATA+GGG | - | chr1_2:37872174-37872193 | None:intergenic | 30.0% | |
ATCCTCTGCAAATTGAAAAT+AGG | - | chr1_2:37872175-37872194 | None:intergenic | 30.0% | |
!!! | TTCAACGACTTTTAGTTTCT+CGG | - | chr1_2:37872407-37872426 | None:intergenic | 30.0% |
AATCAAATCACAATCCTTCT+TGG | - | chr1_2:37872644-37872663 | None:intergenic | 30.0% | |
CAGTGGCATATAATTGTTAA+TGG | + | chr1_2:37872670-37872689 | Msa0069420:CDS | 30.0% | |
TCCTTAAAATTCTTAATCGG+GGG | - | chr1_2:37872709-37872728 | None:intergenic | 30.0% | |
!! | TTTTAAGGATATGAGGTTTC+CGG | + | chr1_2:37872720-37872739 | Msa0069420:CDS | 30.0% |
TTTGAAGATGTTGAAAACCA+AGG | + | chr1_2:37872750-37872769 | Msa0069420:CDS | 30.0% | |
TTGAAGATGTTGAAAACCAA+GGG | + | chr1_2:37872751-37872770 | Msa0069420:CDS | 30.0% | |
!! | GTCTTCCAGTTATTTTATCT+GGG | + | chr1_2:37872806-37872825 | Msa0069420:CDS | 30.0% |
!! | ATGATTGGAATTGCTTTTAC+GGG | + | chr1_2:37872835-37872854 | Msa0069420:CDS | 30.0% |
!!! | TCTAGCAAAGTTCTGAATTT+TGG | - | chr1_2:37873316-37873335 | None:intergenic | 30.0% |
AAAACCTATTATTGTCAACG+TGG | + | chr1_2:37873347-37873366 | Msa0069420:CDS | 30.0% | |
AAACCTATTATTGTCAACGT+GGG | + | chr1_2:37873348-37873367 | Msa0069420:CDS | 30.0% | |
AAATCTTGATGTTATTCAGG+AGG | + | chr1_2:37873386-37873405 | Msa0069420:CDS | 30.0% | |
TCACAAAATATAAGAACAGG+GGG | - | chr1_2:37873474-37873493 | None:intergenic | 30.0% | |
CTCACAAAATATAAGAACAG+GGG | - | chr1_2:37873475-37873494 | None:intergenic | 30.0% | |
! | GTATGCCATTTCATCATTTA+AGG | + | chr1_2:37873590-37873609 | Msa0069420:CDS | 30.0% |
ATCAGGAAAATCTAAACCTT+TGG | - | chr1_2:37873655-37873674 | None:intergenic | 30.0% | |
! | TTGATGACATGTTGAATATC+AGG | - | chr1_2:37873672-37873691 | None:intergenic | 30.0% |
GAAAATTATGTCCATAGGAT+TGG | + | chr1_2:37873714-37873733 | Msa0069420:CDS | 30.0% | |
GAAGATAATGAAGAAATCAC+AGG | + | chr1_2:37873885-37873904 | Msa0069420:CDS | 30.0% | |
! | GTTCTAATTTAGGACAATCA+CGG | - | chr1_2:37873962-37873981 | None:intergenic | 30.0% |
CTCTTCTGATGTTCTAATTT+AGG | - | chr1_2:37873972-37873991 | None:intergenic | 30.0% | |
!!! | AGAAAGGATTATTTTGGATC+TGG | + | chr1_2:37874011-37874030 | Msa0069420:CDS | 30.0% |
AAATGTTGCAGATAGTACAT+GGG | - | chr1_2:37874215-37874234 | None:intergenic | 30.0% | |
TAAATGTTGCAGATAGTACA+TGG | - | chr1_2:37874216-37874235 | None:intergenic | 30.0% | |
! | ATCCATCTTCCTTGTATTTT+CGG | + | chr1_2:37872130-37872149 | Msa0069420:intron | 30.0% |
TAGAATGAACCGAAAATACA+AGG | - | chr1_2:37872142-37872161 | None:intergenic | 30.0% | |
TCCTCTGCAAATTGAAAATA+GGG | - | chr1_2:37872174-37872193 | None:intergenic | 30.0% | |
ATCCTCTGCAAATTGAAAAT+AGG | - | chr1_2:37872175-37872194 | None:intergenic | 30.0% | |
!!! | TTCAACGACTTTTAGTTTCT+CGG | - | chr1_2:37872407-37872426 | None:intergenic | 30.0% |
AATCAAATCACAATCCTTCT+TGG | - | chr1_2:37872644-37872663 | None:intergenic | 30.0% | |
CAGTGGCATATAATTGTTAA+TGG | + | chr1_2:37872670-37872689 | Msa0069420:CDS | 30.0% | |
TCCTTAAAATTCTTAATCGG+GGG | - | chr1_2:37872709-37872728 | None:intergenic | 30.0% | |
!! | TTTTAAGGATATGAGGTTTC+CGG | + | chr1_2:37872720-37872739 | Msa0069420:CDS | 30.0% |
TTTGAAGATGTTGAAAACCA+AGG | + | chr1_2:37872750-37872769 | Msa0069420:CDS | 30.0% | |
TTGAAGATGTTGAAAACCAA+GGG | + | chr1_2:37872751-37872770 | Msa0069420:CDS | 30.0% | |
!! | GTCTTCCAGTTATTTTATCT+GGG | + | chr1_2:37872806-37872825 | Msa0069420:CDS | 30.0% |
!! | ATGATTGGAATTGCTTTTAC+GGG | + | chr1_2:37872835-37872854 | Msa0069420:CDS | 30.0% |
!!! | TCTAGCAAAGTTCTGAATTT+TGG | - | chr1_2:37873316-37873335 | None:intergenic | 30.0% |
AAAACCTATTATTGTCAACG+TGG | + | chr1_2:37873347-37873366 | Msa0069420:CDS | 30.0% | |
AAACCTATTATTGTCAACGT+GGG | + | chr1_2:37873348-37873367 | Msa0069420:CDS | 30.0% | |
AAATCTTGATGTTATTCAGG+AGG | + | chr1_2:37873386-37873405 | Msa0069420:CDS | 30.0% | |
TCACAAAATATAAGAACAGG+GGG | - | chr1_2:37873474-37873493 | None:intergenic | 30.0% | |
CTCACAAAATATAAGAACAG+GGG | - | chr1_2:37873475-37873494 | None:intergenic | 30.0% | |
! | GTATGCCATTTCATCATTTA+AGG | + | chr1_2:37873590-37873609 | Msa0069420:CDS | 30.0% |
ATCAGGAAAATCTAAACCTT+TGG | - | chr1_2:37873655-37873674 | None:intergenic | 30.0% | |
! | TTGATGACATGTTGAATATC+AGG | - | chr1_2:37873672-37873691 | None:intergenic | 30.0% |
GAAAATTATGTCCATAGGAT+TGG | + | chr1_2:37873714-37873733 | Msa0069420:CDS | 30.0% | |
GAAGATAATGAAGAAATCAC+AGG | + | chr1_2:37873885-37873904 | Msa0069420:CDS | 30.0% | |
! | GTTCTAATTTAGGACAATCA+CGG | - | chr1_2:37873962-37873981 | None:intergenic | 30.0% |
CTCTTCTGATGTTCTAATTT+AGG | - | chr1_2:37873972-37873991 | None:intergenic | 30.0% | |
!!! | AGAAAGGATTATTTTGGATC+TGG | + | chr1_2:37874011-37874030 | Msa0069420:CDS | 30.0% |
AAATGTTGCAGATAGTACAT+GGG | - | chr1_2:37874215-37874234 | None:intergenic | 30.0% | |
TAAATGTTGCAGATAGTACA+TGG | - | chr1_2:37874216-37874235 | None:intergenic | 30.0% | |
GAATTGAAGAGCAAAGAAGA+TGG | - | chr1_2:37872102-37872121 | None:intergenic | 35.0% | |
TCTTCTTTGCTCTTCAATTC+AGG | + | chr1_2:37872102-37872121 | Msa0069420:five_prime_UTR | 35.0% | |
AACCGAAAATACAAGGAAGA+TGG | - | chr1_2:37872135-37872154 | None:intergenic | 35.0% | |
! | ACCCTATTTTCAATTTGCAG+AGG | + | chr1_2:37872170-37872189 | Msa0069420:intron | 35.0% |
GAATTCAGTGGTAGCAATAA+TGG | + | chr1_2:37872267-37872286 | Msa0069420:intron | 35.0% | |
GGAAGAAGAAGATGATTATG+AGG | + | chr1_2:37872288-37872307 | Msa0069420:CDS | 35.0% | |
AGAAGATTCTACAACGCAAA+GGG | + | chr1_2:37872350-37872369 | Msa0069420:CDS | 35.0% | |
! | TAAGCCAAGTCTACTTGTTA+AGG | + | chr1_2:37872429-37872448 | Msa0069420:CDS | 35.0% |
ACAGATTGTTCAACAAGAGA+AGG | + | chr1_2:37872495-37872514 | Msa0069420:CDS | 35.0% | |
GGAGATGATTGAGAATTTGT+CGG | + | chr1_2:37872516-37872535 | Msa0069420:CDS | 35.0% | |
GGATAAGAAAACCCTTATGT+CGG | + | chr1_2:37872537-37872556 | Msa0069420:CDS | 35.0% | |
TAATTCACGAACCGACATAA+GGG | - | chr1_2:37872551-37872570 | None:intergenic | 35.0% | |
CTCAGTATAAGTAATCCCTT+TGG | - | chr1_2:37872575-37872594 | None:intergenic | 35.0% | |
ATCCTTCTTATATGCAAAGG+AGG | - | chr1_2:37872619-37872638 | None:intergenic | 35.0% | |
GACATCCTTCTTATATGCAA+AGG | - | chr1_2:37872622-37872641 | None:intergenic | 35.0% | |
TATAAGAAGGATGTCCAAGA+AGG | + | chr1_2:37872627-37872646 | Msa0069420:CDS | 35.0% | |
GTGATTTGATTCAGAAACAG+TGG | + | chr1_2:37872653-37872672 | Msa0069420:CDS | 35.0% | |
TTAAAATTCTTAATCGGGGG+CGG | - | chr1_2:37872706-37872725 | None:intergenic | 35.0% | |
AACATCTTCAAAATCGGATC+CGG | - | chr1_2:37872742-37872761 | None:intergenic | 35.0% | |
TGAAGATGTTGAAAACCAAG+GGG | + | chr1_2:37872752-37872771 | Msa0069420:CDS | 35.0% | |
!! | GGTCTTCCAGTTATTTTATC+TGG | + | chr1_2:37872805-37872824 | Msa0069420:CDS | 35.0% |
!! | TTCCAGTTATTTTATCTGGG+AGG | + | chr1_2:37872809-37872828 | Msa0069420:CDS | 35.0% |
!! | TCCAGTTATTTTATCTGGGA+GGG | + | chr1_2:37872810-37872829 | Msa0069420:CDS | 35.0% |
TGCATTGCCATCATAATCAT+CGG | - | chr1_2:37872889-37872908 | None:intergenic | 35.0% | |
GGACAAATAATCAGACCAAA+CGG | - | chr1_2:37872949-37872968 | None:intergenic | 35.0% | |
TCTGATTATTTGTCCGTCAA+GGG | + | chr1_2:37872954-37872973 | Msa0069420:CDS | 35.0% | |
ATATAGTTGTTGCTACTCCT+GGG | + | chr1_2:37873118-37873137 | Msa0069420:CDS | 35.0% | |
TTGATCACTTCAAAGCTCAA+AGG | + | chr1_2:37873259-37873278 | Msa0069420:CDS | 35.0% | |
TTGGCATAGTAGCAGAAAAT+AGG | - | chr1_2:37873293-37873312 | None:intergenic | 35.0% | |
!!! | GCAAAGTTCTGAATTTTGGT+TGG | - | chr1_2:37873312-37873331 | None:intergenic | 35.0% |
GGCAAATCTTGATGTTATTC+AGG | + | chr1_2:37873383-37873402 | Msa0069420:CDS | 35.0% | |
CATGAGTATCTTCTCTTGAA+AGG | + | chr1_2:37873519-37873538 | Msa0069420:CDS | 35.0% | |
TCCAGCCTTAAATGATGAAA+TGG | - | chr1_2:37873598-37873617 | None:intergenic | 35.0% | |
! | TCTGTTTAGCTTCTTGCAAA+AGG | - | chr1_2:37873827-37873846 | None:intergenic | 35.0% |
! | TTTTGCAAGAAGCTAAACAG+AGG | + | chr1_2:37873826-37873845 | Msa0069420:CDS | 35.0% |
ATTAGAACATCAGAAGAGTG+TGG | + | chr1_2:37873974-37873993 | Msa0069420:CDS | 35.0% | |
GGCCATTGCAAATAATAGAA+AGG | + | chr1_2:37873995-37874014 | Msa0069420:CDS | 35.0% | |
!!! | AAGGATTATTTTGGATCTGG+AGG | + | chr1_2:37874014-37874033 | Msa0069420:CDS | 35.0% |
!! | ATTATCAAAAGCACCAGTAC+AGG | - | chr1_2:37874260-37874279 | None:intergenic | 35.0% |
!! | ACTGCAGATTGATTTTCATC+TGG | + | chr1_2:37874299-37874318 | Msa0069420:three_prime_UTR | 35.0% |
GAATTGAAGAGCAAAGAAGA+TGG | - | chr1_2:37872102-37872121 | None:intergenic | 35.0% | |
TCTTCTTTGCTCTTCAATTC+AGG | + | chr1_2:37872102-37872121 | Msa0069420:five_prime_UTR | 35.0% | |
AACCGAAAATACAAGGAAGA+TGG | - | chr1_2:37872135-37872154 | None:intergenic | 35.0% | |
! | ACCCTATTTTCAATTTGCAG+AGG | + | chr1_2:37872170-37872189 | Msa0069420:intron | 35.0% |
GAATTCAGTGGTAGCAATAA+TGG | + | chr1_2:37872267-37872286 | Msa0069420:intron | 35.0% | |
GGAAGAAGAAGATGATTATG+AGG | + | chr1_2:37872288-37872307 | Msa0069420:CDS | 35.0% | |
AGAAGATTCTACAACGCAAA+GGG | + | chr1_2:37872350-37872369 | Msa0069420:CDS | 35.0% | |
! | TAAGCCAAGTCTACTTGTTA+AGG | + | chr1_2:37872429-37872448 | Msa0069420:CDS | 35.0% |
ACAGATTGTTCAACAAGAGA+AGG | + | chr1_2:37872495-37872514 | Msa0069420:CDS | 35.0% | |
GGAGATGATTGAGAATTTGT+CGG | + | chr1_2:37872516-37872535 | Msa0069420:CDS | 35.0% | |
GGATAAGAAAACCCTTATGT+CGG | + | chr1_2:37872537-37872556 | Msa0069420:CDS | 35.0% | |
TAATTCACGAACCGACATAA+GGG | - | chr1_2:37872551-37872570 | None:intergenic | 35.0% | |
CTCAGTATAAGTAATCCCTT+TGG | - | chr1_2:37872575-37872594 | None:intergenic | 35.0% | |
ATCCTTCTTATATGCAAAGG+AGG | - | chr1_2:37872619-37872638 | None:intergenic | 35.0% | |
GACATCCTTCTTATATGCAA+AGG | - | chr1_2:37872622-37872641 | None:intergenic | 35.0% | |
TATAAGAAGGATGTCCAAGA+AGG | + | chr1_2:37872627-37872646 | Msa0069420:CDS | 35.0% | |
GTGATTTGATTCAGAAACAG+TGG | + | chr1_2:37872653-37872672 | Msa0069420:CDS | 35.0% | |
TTAAAATTCTTAATCGGGGG+CGG | - | chr1_2:37872706-37872725 | None:intergenic | 35.0% | |
AACATCTTCAAAATCGGATC+CGG | - | chr1_2:37872742-37872761 | None:intergenic | 35.0% | |
TGAAGATGTTGAAAACCAAG+GGG | + | chr1_2:37872752-37872771 | Msa0069420:CDS | 35.0% | |
!! | GGTCTTCCAGTTATTTTATC+TGG | + | chr1_2:37872805-37872824 | Msa0069420:CDS | 35.0% |
!! | TTCCAGTTATTTTATCTGGG+AGG | + | chr1_2:37872809-37872828 | Msa0069420:CDS | 35.0% |
!! | TCCAGTTATTTTATCTGGGA+GGG | + | chr1_2:37872810-37872829 | Msa0069420:CDS | 35.0% |
TGCATTGCCATCATAATCAT+CGG | - | chr1_2:37872889-37872908 | None:intergenic | 35.0% | |
GGACAAATAATCAGACCAAA+CGG | - | chr1_2:37872949-37872968 | None:intergenic | 35.0% | |
TCTGATTATTTGTCCGTCAA+GGG | + | chr1_2:37872954-37872973 | Msa0069420:CDS | 35.0% | |
ATATAGTTGTTGCTACTCCT+GGG | + | chr1_2:37873118-37873137 | Msa0069420:CDS | 35.0% | |
TTGATCACTTCAAAGCTCAA+AGG | + | chr1_2:37873259-37873278 | Msa0069420:CDS | 35.0% | |
TTGGCATAGTAGCAGAAAAT+AGG | - | chr1_2:37873293-37873312 | None:intergenic | 35.0% | |
!!! | GCAAAGTTCTGAATTTTGGT+TGG | - | chr1_2:37873312-37873331 | None:intergenic | 35.0% |
GGCAAATCTTGATGTTATTC+AGG | + | chr1_2:37873383-37873402 | Msa0069420:CDS | 35.0% | |
CATGAGTATCTTCTCTTGAA+AGG | + | chr1_2:37873519-37873538 | Msa0069420:CDS | 35.0% | |
TCCAGCCTTAAATGATGAAA+TGG | - | chr1_2:37873598-37873617 | None:intergenic | 35.0% | |
! | TCTGTTTAGCTTCTTGCAAA+AGG | - | chr1_2:37873827-37873846 | None:intergenic | 35.0% |
! | TTTTGCAAGAAGCTAAACAG+AGG | + | chr1_2:37873826-37873845 | Msa0069420:CDS | 35.0% |
ATTAGAACATCAGAAGAGTG+TGG | + | chr1_2:37873974-37873993 | Msa0069420:CDS | 35.0% | |
GGCCATTGCAAATAATAGAA+AGG | + | chr1_2:37873995-37874014 | Msa0069420:CDS | 35.0% | |
!!! | AAGGATTATTTTGGATCTGG+AGG | + | chr1_2:37874014-37874033 | Msa0069420:CDS | 35.0% |
!! | ATTATCAAAAGCACCAGTAC+AGG | - | chr1_2:37874260-37874279 | None:intergenic | 35.0% |
!! | ACTGCAGATTGATTTTCATC+TGG | + | chr1_2:37874299-37874318 | Msa0069420:three_prime_UTR | 35.0% |
! | TTATGAGGAGTATATCCCTG+TGG | + | chr1_2:37872303-37872322 | Msa0069420:CDS | 40.0% |
TAGAATCTTCTGAGCTTCCA+TGG | - | chr1_2:37872341-37872360 | None:intergenic | 40.0% | |
CAGAAGATTCTACAACGCAA+AGG | + | chr1_2:37872349-37872368 | Msa0069420:CDS | 40.0% | |
ATCATCTTCTTCGATTGCAG+CGG | - | chr1_2:37872383-37872402 | None:intergenic | 40.0% | |
GATGCCTTAACAAGTAGACT+TGG | - | chr1_2:37872436-37872455 | None:intergenic | 40.0% | |
CTAATTCACGAACCGACATA+AGG | - | chr1_2:37872552-37872571 | None:intergenic | 40.0% | |
AGCCTCCTTTGCATATAAGA+AGG | + | chr1_2:37872614-37872633 | Msa0069420:CDS | 40.0% | |
! | GCCCCCGATTAAGAATTTTA+AGG | + | chr1_2:37872705-37872724 | Msa0069420:CDS | 40.0% |
TCCCTCCCAGATAAAATAAC+TGG | - | chr1_2:37872814-37872833 | None:intergenic | 40.0% | |
TTATCTGGGAGGGATATGAT+TGG | + | chr1_2:37872820-37872839 | Msa0069420:CDS | 40.0% | |
! | TACGGGTTCTGGTAAAACTT+TGG | + | chr1_2:37872852-37872871 | Msa0069420:CDS | 40.0% |
TGTGCTTCCGATGATTATGA+TGG | + | chr1_2:37872879-37872898 | Msa0069420:CDS | 40.0% | |
GATGATTATGATGGCAATGC+AGG | + | chr1_2:37872888-37872907 | Msa0069420:CDS | 40.0% | |
! | ATTATGATGCCGATTGTTCC+TGG | + | chr1_2:37872916-37872935 | Msa0069420:CDS | 40.0% |
! | TTATGATGCCGATTGTTCCT+GGG | + | chr1_2:37872917-37872936 | Msa0069420:CDS | 40.0% |
GTCTGATTATTTGTCCGTCA+AGG | + | chr1_2:37872953-37872972 | Msa0069420:CDS | 40.0% | |
TATTTGTCCGTCAAGGGAAT+TGG | + | chr1_2:37872960-37872979 | Msa0069420:CDS | 40.0% | |
! | TTGTTACCTTTGAAGGAAGC+TGG | + | chr1_2:37873015-37873034 | Msa0069420:CDS | 40.0% |
TTTGAAGGAAGCTGGATATC+CGG | + | chr1_2:37873023-37873042 | Msa0069420:CDS | 40.0% | |
ATTCCACCGATACAAAGCAA+AGG | - | chr1_2:37873057-37873076 | None:intergenic | 40.0% | |
CAGCTTGAGATTGTCAAGAA+GGG | + | chr1_2:37873090-37873109 | Msa0069420:CDS | 40.0% | |
CATATAGTTGTTGCTACTCC+TGG | + | chr1_2:37873117-37873136 | Msa0069420:CDS | 40.0% | |
ATTAGATGAGGCTGATCGAT+TGG | + | chr1_2:37873200-37873219 | Msa0069420:CDS | 40.0% | |
!! | GAACTTTGCTAGAAGTGCTT+TGG | + | chr1_2:37873323-37873342 | Msa0069420:CDS | 40.0% |
CAAAATATAAGAACAGGGGG+TGG | - | chr1_2:37873471-37873490 | None:intergenic | 40.0% | |
GTATCTTCTCTTGAAAGGAG+TGG | + | chr1_2:37873524-37873543 | Msa0069420:CDS | 40.0% | |
! | GCCATTTCATCATTTAAGGC+TGG | + | chr1_2:37873594-37873613 | Msa0069420:CDS | 40.0% |
CAAGCAATGTTGTCTCACTT+TGG | - | chr1_2:37873794-37873813 | None:intergenic | 40.0% | |
GAAGAAATCACAGGCATAAG+TGG | + | chr1_2:37873894-37873913 | Msa0069420:CDS | 40.0% | |
ACAGCTTTCAAATTTCCCCT+CGG | - | chr1_2:37874043-37874062 | None:intergenic | 40.0% | |
AGGGGAAATTTGAAAGCTGT+TGG | + | chr1_2:37874043-37874062 | Msa0069420:exon | 40.0% | |
CACTAGTGCAAATATTAGGG+AGG | - | chr1_2:37874154-37874173 | None:intergenic | 40.0% | |
ACCATACTGAATACCTGTAC+TGG | + | chr1_2:37874244-37874263 | Msa0069420:three_prime_UTR | 40.0% | |
ACCAGTACAGGTATTCAGTA+TGG | - | chr1_2:37874248-37874267 | None:intergenic | 40.0% | |
! | TTATGAGGAGTATATCCCTG+TGG | + | chr1_2:37872303-37872322 | Msa0069420:CDS | 40.0% |
TAGAATCTTCTGAGCTTCCA+TGG | - | chr1_2:37872341-37872360 | None:intergenic | 40.0% | |
CAGAAGATTCTACAACGCAA+AGG | + | chr1_2:37872349-37872368 | Msa0069420:CDS | 40.0% | |
ATCATCTTCTTCGATTGCAG+CGG | - | chr1_2:37872383-37872402 | None:intergenic | 40.0% | |
GATGCCTTAACAAGTAGACT+TGG | - | chr1_2:37872436-37872455 | None:intergenic | 40.0% | |
CTAATTCACGAACCGACATA+AGG | - | chr1_2:37872552-37872571 | None:intergenic | 40.0% | |
AGCCTCCTTTGCATATAAGA+AGG | + | chr1_2:37872614-37872633 | Msa0069420:CDS | 40.0% | |
! | GCCCCCGATTAAGAATTTTA+AGG | + | chr1_2:37872705-37872724 | Msa0069420:CDS | 40.0% |
TCCCTCCCAGATAAAATAAC+TGG | - | chr1_2:37872814-37872833 | None:intergenic | 40.0% | |
TTATCTGGGAGGGATATGAT+TGG | + | chr1_2:37872820-37872839 | Msa0069420:CDS | 40.0% | |
! | TACGGGTTCTGGTAAAACTT+TGG | + | chr1_2:37872852-37872871 | Msa0069420:CDS | 40.0% |
TGTGCTTCCGATGATTATGA+TGG | + | chr1_2:37872879-37872898 | Msa0069420:CDS | 40.0% | |
GATGATTATGATGGCAATGC+AGG | + | chr1_2:37872888-37872907 | Msa0069420:CDS | 40.0% | |
! | ATTATGATGCCGATTGTTCC+TGG | + | chr1_2:37872916-37872935 | Msa0069420:CDS | 40.0% |
! | TTATGATGCCGATTGTTCCT+GGG | + | chr1_2:37872917-37872936 | Msa0069420:CDS | 40.0% |
GTCTGATTATTTGTCCGTCA+AGG | + | chr1_2:37872953-37872972 | Msa0069420:CDS | 40.0% | |
TATTTGTCCGTCAAGGGAAT+TGG | + | chr1_2:37872960-37872979 | Msa0069420:CDS | 40.0% | |
! | TTGTTACCTTTGAAGGAAGC+TGG | + | chr1_2:37873015-37873034 | Msa0069420:CDS | 40.0% |
TTTGAAGGAAGCTGGATATC+CGG | + | chr1_2:37873023-37873042 | Msa0069420:CDS | 40.0% | |
ATTCCACCGATACAAAGCAA+AGG | - | chr1_2:37873057-37873076 | None:intergenic | 40.0% | |
CAGCTTGAGATTGTCAAGAA+GGG | + | chr1_2:37873090-37873109 | Msa0069420:CDS | 40.0% | |
CATATAGTTGTTGCTACTCC+TGG | + | chr1_2:37873117-37873136 | Msa0069420:CDS | 40.0% | |
ATTAGATGAGGCTGATCGAT+TGG | + | chr1_2:37873200-37873219 | Msa0069420:CDS | 40.0% | |
!! | GAACTTTGCTAGAAGTGCTT+TGG | + | chr1_2:37873323-37873342 | Msa0069420:CDS | 40.0% |
CAAAATATAAGAACAGGGGG+TGG | - | chr1_2:37873471-37873490 | None:intergenic | 40.0% | |
GTATCTTCTCTTGAAAGGAG+TGG | + | chr1_2:37873524-37873543 | Msa0069420:CDS | 40.0% | |
! | GCCATTTCATCATTTAAGGC+TGG | + | chr1_2:37873594-37873613 | Msa0069420:CDS | 40.0% |
CAAGCAATGTTGTCTCACTT+TGG | - | chr1_2:37873794-37873813 | None:intergenic | 40.0% | |
GAAGAAATCACAGGCATAAG+TGG | + | chr1_2:37873894-37873913 | Msa0069420:CDS | 40.0% | |
ACAGCTTTCAAATTTCCCCT+CGG | - | chr1_2:37874043-37874062 | None:intergenic | 40.0% | |
AGGGGAAATTTGAAAGCTGT+TGG | + | chr1_2:37874043-37874062 | Msa0069420:exon | 40.0% | |
CACTAGTGCAAATATTAGGG+AGG | - | chr1_2:37874154-37874173 | None:intergenic | 40.0% | |
ACCATACTGAATACCTGTAC+TGG | + | chr1_2:37874244-37874263 | Msa0069420:three_prime_UTR | 40.0% | |
ACCAGTACAGGTATTCAGTA+TGG | - | chr1_2:37874248-37874267 | None:intergenic | 40.0% | |
TGTTCTGTGACACTGATCTC+AGG | - | chr1_2:37872478-37872497 | None:intergenic | 45.0% | |
! | TCGGTTCGTGAATTAGCCAA+AGG | + | chr1_2:37872556-37872575 | Msa0069420:CDS | 45.0% |
CGGTTCGTGAATTAGCCAAA+GGG | + | chr1_2:37872557-37872576 | Msa0069420:CDS | 45.0% | |
TATACTGAGCCTTTGCCTAC+TGG | + | chr1_2:37872586-37872605 | Msa0069420:CDS | 45.0% | |
ATACTGAGCCTTTGCCTACT+GGG | + | chr1_2:37872587-37872606 | Msa0069420:CDS | 45.0% | |
!! | GGAATTGCTTTTACGGGTTC+TGG | + | chr1_2:37872841-37872860 | Msa0069420:CDS | 45.0% |
GATTATGATGGCAATGCAGG+AGG | + | chr1_2:37872891-37872910 | Msa0069420:CDS | 45.0% | |
! | TATGATGCCGATTGTTCCTG+GGG | + | chr1_2:37872918-37872937 | Msa0069420:CDS | 45.0% |
GGATATCCAGCTTCCTTCAA+AGG | - | chr1_2:37873024-37873043 | None:intergenic | 45.0% | |
CTCAGGCCTTTGCTTTGTAT+CGG | + | chr1_2:37873048-37873067 | Msa0069420:CDS | 45.0% | |
GCAGCTTGAGATTGTCAAGA+AGG | + | chr1_2:37873089-37873108 | Msa0069420:CDS | 45.0% | |
AACATATCCTTCAACCTCCC+AGG | - | chr1_2:37873138-37873157 | None:intergenic | 45.0% | |
TGGGAGGTTGAAGGATATGT+TGG | + | chr1_2:37873137-37873156 | Msa0069420:CDS | 45.0% | |
! | GCTGATCGATTGGTCGATTT+GGG | + | chr1_2:37873210-37873229 | Msa0069420:CDS | 45.0% |
CGTCCCACGTTGACAATAAT+AGG | - | chr1_2:37873354-37873373 | None:intergenic | 45.0% | |
GGTAGAGTATGTCAAGCAAG+AGG | + | chr1_2:37873407-37873426 | Msa0069420:CDS | 45.0% | |
!!! | TTTTCTGAAGGCACTCAAGG+AGG | - | chr1_2:37873446-37873465 | None:intergenic | 45.0% |
!!! | GAGTTTTCTGAAGGCACTCA+AGG | - | chr1_2:37873449-37873468 | None:intergenic | 45.0% |
TATTCATGGAGGCAAGGATC+AGG | + | chr1_2:37873557-37873576 | Msa0069420:CDS | 45.0% | |
GGCTGGAAAGAAAGATGTGT+TGG | + | chr1_2:37873611-37873630 | Msa0069420:CDS | 45.0% | |
GCAACTGATGTTGCATCCAA+AGG | + | chr1_2:37873636-37873655 | Msa0069420:CDS | 45.0% | |
! | ACCAGTTTTGCCACATCTTC+CGG | - | chr1_2:37873745-37873764 | None:intergenic | 45.0% |
! | ACAGGCATAAGTGGTGTCAA+GGG | + | chr1_2:37873903-37873922 | Msa0069420:CDS | 45.0% |
! | AAAACGAGAGCAGAAGGCAT+CGG | - | chr1_2:37874358-37874377 | None:intergenic | 45.0% |
CGACAAAAAACGAGAGCAGA+AGG | - | chr1_2:37874364-37874383 | None:intergenic | 45.0% | |
TGTTCTGTGACACTGATCTC+AGG | - | chr1_2:37872478-37872497 | None:intergenic | 45.0% | |
! | TCGGTTCGTGAATTAGCCAA+AGG | + | chr1_2:37872556-37872575 | Msa0069420:CDS | 45.0% |
CGGTTCGTGAATTAGCCAAA+GGG | + | chr1_2:37872557-37872576 | Msa0069420:CDS | 45.0% | |
TATACTGAGCCTTTGCCTAC+TGG | + | chr1_2:37872586-37872605 | Msa0069420:CDS | 45.0% | |
ATACTGAGCCTTTGCCTACT+GGG | + | chr1_2:37872587-37872606 | Msa0069420:CDS | 45.0% | |
!! | GGAATTGCTTTTACGGGTTC+TGG | + | chr1_2:37872841-37872860 | Msa0069420:CDS | 45.0% |
GATTATGATGGCAATGCAGG+AGG | + | chr1_2:37872891-37872910 | Msa0069420:CDS | 45.0% | |
! | TATGATGCCGATTGTTCCTG+GGG | + | chr1_2:37872918-37872937 | Msa0069420:CDS | 45.0% |
GGATATCCAGCTTCCTTCAA+AGG | - | chr1_2:37873024-37873043 | None:intergenic | 45.0% | |
CTCAGGCCTTTGCTTTGTAT+CGG | + | chr1_2:37873048-37873067 | Msa0069420:CDS | 45.0% | |
GCAGCTTGAGATTGTCAAGA+AGG | + | chr1_2:37873089-37873108 | Msa0069420:CDS | 45.0% | |
AACATATCCTTCAACCTCCC+AGG | - | chr1_2:37873138-37873157 | None:intergenic | 45.0% | |
TGGGAGGTTGAAGGATATGT+TGG | + | chr1_2:37873137-37873156 | Msa0069420:CDS | 45.0% | |
! | GCTGATCGATTGGTCGATTT+GGG | + | chr1_2:37873210-37873229 | Msa0069420:CDS | 45.0% |
CGTCCCACGTTGACAATAAT+AGG | - | chr1_2:37873354-37873373 | None:intergenic | 45.0% | |
GGTAGAGTATGTCAAGCAAG+AGG | + | chr1_2:37873407-37873426 | Msa0069420:CDS | 45.0% | |
!!! | TTTTCTGAAGGCACTCAAGG+AGG | - | chr1_2:37873446-37873465 | None:intergenic | 45.0% |
!!! | GAGTTTTCTGAAGGCACTCA+AGG | - | chr1_2:37873449-37873468 | None:intergenic | 45.0% |
TATTCATGGAGGCAAGGATC+AGG | + | chr1_2:37873557-37873576 | Msa0069420:CDS | 45.0% | |
GGCTGGAAAGAAAGATGTGT+TGG | + | chr1_2:37873611-37873630 | Msa0069420:CDS | 45.0% | |
GCAACTGATGTTGCATCCAA+AGG | + | chr1_2:37873636-37873655 | Msa0069420:CDS | 45.0% | |
! | ACCAGTTTTGCCACATCTTC+CGG | - | chr1_2:37873745-37873764 | None:intergenic | 45.0% |
! | ACAGGCATAAGTGGTGTCAA+GGG | + | chr1_2:37873903-37873922 | Msa0069420:CDS | 45.0% |
! | AAAACGAGAGCAGAAGGCAT+CGG | - | chr1_2:37874358-37874377 | None:intergenic | 45.0% |
CGACAAAAAACGAGAGCAGA+AGG | - | chr1_2:37874364-37874383 | None:intergenic | 45.0% | |
! | GAGAGTGAGTTGCAGGGTTT+TGG | - | chr1_2:37872057-37872076 | None:intergenic | 50.0% |
AGATGGAGTAGACGACGCTA+GGG | - | chr1_2:37872085-37872104 | None:intergenic | 50.0% | |
AAGATGGAGTAGACGACGCT+AGG | - | chr1_2:37872086-37872105 | None:intergenic | 50.0% | |
TGCCTAGCCAATTCCCTTGA+CGG | - | chr1_2:37872970-37872989 | None:intergenic | 50.0% | |
AGGCCTTTGCTTTGTATCGG+TGG | + | chr1_2:37873051-37873070 | Msa0069420:CDS | 50.0% | |
TAGTTGTTGCTACTCCTGGG+AGG | + | chr1_2:37873121-37873140 | Msa0069420:CDS | 50.0% | |
! | GGCTGATCGATTGGTCGATT+TGG | + | chr1_2:37873209-37873228 | Msa0069420:CDS | 50.0% |
CTTGCCTCCATGAATAGCCA+CGG | - | chr1_2:37873553-37873572 | None:intergenic | 50.0% | |
GTCCATAGGATTGGACGTAC+CGG | + | chr1_2:37873723-37873742 | Msa0069420:CDS | 50.0% | |
TTCCGGTACGTCCAATCCTA+TGG | - | chr1_2:37873728-37873747 | None:intergenic | 50.0% | |
ATTGGACGTACCGGAAGATG+TGG | + | chr1_2:37873732-37873751 | Msa0069420:CDS | 50.0% | |
ACCGGAAGATGTGGCAAAAC+TGG | + | chr1_2:37873741-37873760 | Msa0069420:CDS | 50.0% | |
AACCAGCTCAGCCAAAACAG+GGG | - | chr1_2:37873856-37873875 | None:intergenic | 50.0% | |
CAACCAGCTCAGCCAAAACA+GGG | - | chr1_2:37873857-37873876 | None:intergenic | 50.0% | |
TCAACCAGCTCAGCCAAAAC+AGG | - | chr1_2:37873858-37873877 | None:intergenic | 50.0% | |
! | CACAGGCATAAGTGGTGTCA+AGG | + | chr1_2:37873902-37873921 | Msa0069420:CDS | 50.0% |
GTCAAGGGCTGTGCATATTG+TGG | + | chr1_2:37873918-37873937 | Msa0069420:CDS | 50.0% | |
AAGGGCTGTGCATATTGTGG+CGG | + | chr1_2:37873921-37873940 | Msa0069420:CDS | 50.0% | |
TTTGGATCTGGAGGTTACCG+AGG | + | chr1_2:37874023-37874042 | Msa0069420:CDS | 50.0% | |
TTGGATCTGGAGGTTACCGA+GGG | + | chr1_2:37874024-37874043 | Msa0069420:CDS | 50.0% | |
! | CTGGTTGATTCAGCGTAGTC+TGG | + | chr1_2:37874318-37874337 | Msa0069420:three_prime_UTR | 50.0% |
!! | AAACGAGAGCAGAAGGCATC+GGG | - | chr1_2:37874357-37874376 | None:intergenic | 50.0% |
! | GAGAGTGAGTTGCAGGGTTT+TGG | - | chr1_2:37872057-37872076 | None:intergenic | 50.0% |
AGATGGAGTAGACGACGCTA+GGG | - | chr1_2:37872085-37872104 | None:intergenic | 50.0% | |
AAGATGGAGTAGACGACGCT+AGG | - | chr1_2:37872086-37872105 | None:intergenic | 50.0% | |
TGCCTAGCCAATTCCCTTGA+CGG | - | chr1_2:37872970-37872989 | None:intergenic | 50.0% | |
AGGCCTTTGCTTTGTATCGG+TGG | + | chr1_2:37873051-37873070 | Msa0069420:CDS | 50.0% | |
TAGTTGTTGCTACTCCTGGG+AGG | + | chr1_2:37873121-37873140 | Msa0069420:CDS | 50.0% | |
! | GGCTGATCGATTGGTCGATT+TGG | + | chr1_2:37873209-37873228 | Msa0069420:CDS | 50.0% |
CTTGCCTCCATGAATAGCCA+CGG | - | chr1_2:37873553-37873572 | None:intergenic | 50.0% | |
GTCCATAGGATTGGACGTAC+CGG | + | chr1_2:37873723-37873742 | Msa0069420:CDS | 50.0% | |
TTCCGGTACGTCCAATCCTA+TGG | - | chr1_2:37873728-37873747 | None:intergenic | 50.0% | |
ATTGGACGTACCGGAAGATG+TGG | + | chr1_2:37873732-37873751 | Msa0069420:CDS | 50.0% | |
ACCGGAAGATGTGGCAAAAC+TGG | + | chr1_2:37873741-37873760 | Msa0069420:CDS | 50.0% | |
AACCAGCTCAGCCAAAACAG+GGG | - | chr1_2:37873856-37873875 | None:intergenic | 50.0% | |
CAACCAGCTCAGCCAAAACA+GGG | - | chr1_2:37873857-37873876 | None:intergenic | 50.0% | |
TCAACCAGCTCAGCCAAAAC+AGG | - | chr1_2:37873858-37873877 | None:intergenic | 50.0% | |
! | CACAGGCATAAGTGGTGTCA+AGG | + | chr1_2:37873902-37873921 | Msa0069420:CDS | 50.0% |
GTCAAGGGCTGTGCATATTG+TGG | + | chr1_2:37873918-37873937 | Msa0069420:CDS | 50.0% | |
AAGGGCTGTGCATATTGTGG+CGG | + | chr1_2:37873921-37873940 | Msa0069420:CDS | 50.0% | |
TTTGGATCTGGAGGTTACCG+AGG | + | chr1_2:37874023-37874042 | Msa0069420:CDS | 50.0% | |
TTGGATCTGGAGGTTACCGA+GGG | + | chr1_2:37874024-37874043 | Msa0069420:CDS | 50.0% | |
! | CTGGTTGATTCAGCGTAGTC+TGG | + | chr1_2:37874318-37874337 | Msa0069420:three_prime_UTR | 50.0% |
!! | AAACGAGAGCAGAAGGCATC+GGG | - | chr1_2:37874357-37874376 | None:intergenic | 50.0% |
GTTCGCGAGAGTGAGTTGCA+GGG | - | chr1_2:37872063-37872082 | None:intergenic | 55.0% | |
AAAGGAGGCTTCCACCCAGT+AGG | - | chr1_2:37872604-37872623 | None:intergenic | 55.0% | |
TGTGCAGCCAACGCCTATTC+AGG | + | chr1_2:37872777-37872796 | Msa0069420:CDS | 55.0% | |
CCAACGCCTATTCAGGTGCA+GGG | + | chr1_2:37872784-37872803 | Msa0069420:CDS | 55.0% | |
GGAAGACCCTGCACCTGAAT+AGG | - | chr1_2:37872793-37872812 | None:intergenic | 55.0% | |
! | ATGCCGATTGTTCCTGGGGA+AGG | + | chr1_2:37872922-37872941 | Msa0069420:CDS | 55.0% |
GGACCTTCCCCAGGAACAAT+CGG | - | chr1_2:37872928-37872947 | None:intergenic | 55.0% | |
GTCCGTCAAGGGAATTGGCT+AGG | + | chr1_2:37872965-37872984 | Msa0069420:CDS | 55.0% | |
AAGCTGGATATCCGGAGCTC+AGG | + | chr1_2:37873031-37873050 | Msa0069420:CDS | 55.0% | |
CAAAGCAAAGGCCTGAGCTC+CGG | - | chr1_2:37873045-37873064 | None:intergenic | 55.0% | |
TGCTACTCCTGGGAGGTTGA+AGG | + | chr1_2:37873128-37873147 | Msa0069420:CDS | 55.0% | |
ATTGTCAACGTGGGACGTGC+AGG | + | chr1_2:37873357-37873376 | Msa0069420:CDS | 55.0% | |
TTGTCAACGTGGGACGTGCA+GGG | + | chr1_2:37873358-37873377 | Msa0069420:CDS | 55.0% | |
! | CAGGGGGTGGAGTTTTCTGA+AGG | - | chr1_2:37873458-37873477 | None:intergenic | 55.0% |
CTTGAAAGGAGTGGAAGCCG+TGG | + | chr1_2:37873533-37873552 | Msa0069420:CDS | 55.0% | |
GTGGAAGCCGTGGCTATTCA+TGG | + | chr1_2:37873543-37873562 | Msa0069420:CDS | 55.0% | |
GAAGCCGTGGCTATTCATGG+AGG | + | chr1_2:37873546-37873565 | Msa0069420:CDS | 55.0% | |
CGTGGCTATTCATGGAGGCA+AGG | + | chr1_2:37873551-37873570 | Msa0069420:CDS | 55.0% | |
! | ACAGAGGATCCCCCCTGTTT+TGG | + | chr1_2:37873842-37873861 | Msa0069420:CDS | 55.0% |
ACCAGCTCAGCCAAAACAGG+GGG | - | chr1_2:37873855-37873874 | None:intergenic | 55.0% | |
GGCTGAGCTGGTTGATCCAA+TGG | + | chr1_2:37873863-37873882 | Msa0069420:CDS | 55.0% | |
AGGGCTGTGCATATTGTGGC+GGG | + | chr1_2:37873922-37873941 | Msa0069420:CDS | 55.0% | |
!! | TGTGCATATTGTGGCGGGCT+TGG | + | chr1_2:37873927-37873946 | Msa0069420:CDS | 55.0% |
TGGATCTGGAGGTTACCGAG+GGG | + | chr1_2:37874025-37874044 | Msa0069420:CDS | 55.0% | |
GTTCGCGAGAGTGAGTTGCA+GGG | - | chr1_2:37872063-37872082 | None:intergenic | 55.0% | |
AAAGGAGGCTTCCACCCAGT+AGG | - | chr1_2:37872604-37872623 | None:intergenic | 55.0% | |
TGTGCAGCCAACGCCTATTC+AGG | + | chr1_2:37872777-37872796 | Msa0069420:CDS | 55.0% | |
CCAACGCCTATTCAGGTGCA+GGG | + | chr1_2:37872784-37872803 | Msa0069420:CDS | 55.0% | |
GGAAGACCCTGCACCTGAAT+AGG | - | chr1_2:37872793-37872812 | None:intergenic | 55.0% | |
! | ATGCCGATTGTTCCTGGGGA+AGG | + | chr1_2:37872922-37872941 | Msa0069420:CDS | 55.0% |
GGACCTTCCCCAGGAACAAT+CGG | - | chr1_2:37872928-37872947 | None:intergenic | 55.0% | |
GTCCGTCAAGGGAATTGGCT+AGG | + | chr1_2:37872965-37872984 | Msa0069420:CDS | 55.0% | |
AAGCTGGATATCCGGAGCTC+AGG | + | chr1_2:37873031-37873050 | Msa0069420:CDS | 55.0% | |
CAAAGCAAAGGCCTGAGCTC+CGG | - | chr1_2:37873045-37873064 | None:intergenic | 55.0% | |
TGCTACTCCTGGGAGGTTGA+AGG | + | chr1_2:37873128-37873147 | Msa0069420:CDS | 55.0% | |
ATTGTCAACGTGGGACGTGC+AGG | + | chr1_2:37873357-37873376 | Msa0069420:CDS | 55.0% | |
TTGTCAACGTGGGACGTGCA+GGG | + | chr1_2:37873358-37873377 | Msa0069420:CDS | 55.0% | |
! | CAGGGGGTGGAGTTTTCTGA+AGG | - | chr1_2:37873458-37873477 | None:intergenic | 55.0% |
CTTGAAAGGAGTGGAAGCCG+TGG | + | chr1_2:37873533-37873552 | Msa0069420:CDS | 55.0% | |
GTGGAAGCCGTGGCTATTCA+TGG | + | chr1_2:37873543-37873562 | Msa0069420:CDS | 55.0% | |
GAAGCCGTGGCTATTCATGG+AGG | + | chr1_2:37873546-37873565 | Msa0069420:CDS | 55.0% | |
CGTGGCTATTCATGGAGGCA+AGG | + | chr1_2:37873551-37873570 | Msa0069420:CDS | 55.0% | |
! | ACAGAGGATCCCCCCTGTTT+TGG | + | chr1_2:37873842-37873861 | Msa0069420:CDS | 55.0% |
ACCAGCTCAGCCAAAACAGG+GGG | - | chr1_2:37873855-37873874 | None:intergenic | 55.0% | |
GGCTGAGCTGGTTGATCCAA+TGG | + | chr1_2:37873863-37873882 | Msa0069420:CDS | 55.0% | |
AGGGCTGTGCATATTGTGGC+GGG | + | chr1_2:37873922-37873941 | Msa0069420:CDS | 55.0% | |
!! | TGTGCATATTGTGGCGGGCT+TGG | + | chr1_2:37873927-37873946 | Msa0069420:CDS | 55.0% |
TGGATCTGGAGGTTACCGAG+GGG | + | chr1_2:37874025-37874044 | Msa0069420:CDS | 55.0% | |
GGTTCGCGAGAGTGAGTTGC+AGG | - | chr1_2:37872064-37872083 | None:intergenic | 60.0% | |
CTGAGCCTTTGCCTACTGGG+TGG | + | chr1_2:37872590-37872609 | Msa0069420:CDS | 60.0% | |
GGCTTCCACCCAGTAGGCAA+AGG | - | chr1_2:37872598-37872617 | None:intergenic | 60.0% | |
! | CGTTGGCTGCACAATCCCCT+TGG | - | chr1_2:37872770-37872789 | None:intergenic | 60.0% |
GCCAACGCCTATTCAGGTGC+AGG | + | chr1_2:37872783-37872802 | Msa0069420:CDS | 60.0% | |
CCCTGCACCTGAATAGGCGT+TGG | - | chr1_2:37872787-37872806 | None:intergenic | 60.0% | |
GTTCCTGGGGAAGGTCCGTT+TGG | + | chr1_2:37872931-37872950 | Msa0069420:CDS | 60.0% | |
AGACCAAACGGACCTTCCCC+AGG | - | chr1_2:37872937-37872956 | None:intergenic | 60.0% | |
TGTCAACGTGGGACGTGCAG+GGG | + | chr1_2:37873359-37873378 | Msa0069420:CDS | 60.0% | |
CCAGCTCAGCCAAAACAGGG+GGG | - | chr1_2:37873854-37873873 | None:intergenic | 60.0% | |
GGTTCGCGAGAGTGAGTTGC+AGG | - | chr1_2:37872064-37872083 | None:intergenic | 60.0% | |
CTGAGCCTTTGCCTACTGGG+TGG | + | chr1_2:37872590-37872609 | Msa0069420:CDS | 60.0% | |
GGCTTCCACCCAGTAGGCAA+AGG | - | chr1_2:37872598-37872617 | None:intergenic | 60.0% | |
! | CGTTGGCTGCACAATCCCCT+TGG | - | chr1_2:37872770-37872789 | None:intergenic | 60.0% |
GCCAACGCCTATTCAGGTGC+AGG | + | chr1_2:37872783-37872802 | Msa0069420:CDS | 60.0% | |
CCCTGCACCTGAATAGGCGT+TGG | - | chr1_2:37872787-37872806 | None:intergenic | 60.0% | |
GTTCCTGGGGAAGGTCCGTT+TGG | + | chr1_2:37872931-37872950 | Msa0069420:CDS | 60.0% | |
AGACCAAACGGACCTTCCCC+AGG | - | chr1_2:37872937-37872956 | None:intergenic | 60.0% | |
TGTCAACGTGGGACGTGCAG+GGG | + | chr1_2:37873359-37873378 | Msa0069420:CDS | 60.0% | |
CCAGCTCAGCCAAAACAGGG+GGG | - | chr1_2:37873854-37873873 | None:intergenic | 60.0% | |
AGCTTCCATGGCGCGACGCT+TGG | - | chr1_2:37872329-37872348 | None:intergenic | 65.0% | |
!!! | CCCCCCTGTTTTGGCTGAGC+TGG | + | chr1_2:37873851-37873870 | Msa0069420:CDS | 65.0% |
AGCTTCCATGGCGCGACGCT+TGG | - | chr1_2:37872329-37872348 | None:intergenic | 65.0% | |
!!! | CCCCCCTGTTTTGGCTGAGC+TGG | + | chr1_2:37873851-37873870 | Msa0069420:CDS | 65.0% |
TGGCGCGACGCTTGGCCACA+GGG | - | chr1_2:37872321-37872340 | None:intergenic | 70.0% | |
ATGGCGCGACGCTTGGCCAC+AGG | - | chr1_2:37872322-37872341 | None:intergenic | 70.0% | |
! | TGTGGCCAAGCGTCGCGCCA+TGG | + | chr1_2:37872321-37872340 | Msa0069420:CDS | 70.0% |
CAACGTGGGACGTGCAGGGG+CGG | + | chr1_2:37873362-37873381 | Msa0069420:CDS | 70.0% | |
TGGCGCGACGCTTGGCCACA+GGG | - | chr1_2:37872321-37872340 | None:intergenic | 70.0% | |
ATGGCGCGACGCTTGGCCAC+AGG | - | chr1_2:37872322-37872341 | None:intergenic | 70.0% | |
! | TGTGGCCAAGCGTCGCGCCA+TGG | + | chr1_2:37872321-37872340 | Msa0069420:CDS | 70.0% |
CAACGTGGGACGTGCAGGGG+CGG | + | chr1_2:37873362-37873381 | Msa0069420:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 37871979 | 37874419 | 37871979 | ID=Msa0069420;Name=Msa0069420 |
chr1_2 | mRNA | 37871979 | 37874419 | 37871979 | ID=Msa0069420-mRNA-1;Parent=Msa0069420;Name=Msa0069420-mRNA-1;_AED=0.00;_eAED=0.00;_QI=156|1|1|1|1|1|2|364|589 |
chr1_2 | exon | 37871979 | 37872123 | 37871979 | ID=Msa0069420-mRNA-1:exon:11920;Parent=Msa0069420-mRNA-1 |
chr1_2 | exon | 37872275 | 37874419 | 37872275 | ID=Msa0069420-mRNA-1:exon:11921;Parent=Msa0069420-mRNA-1 |
chr1_2 | five_prime_UTR | 37871979 | 37872123 | 37871979 | ID=Msa0069420-mRNA-1:five_prime_utr;Parent=Msa0069420-mRNA-1 |
chr1_2 | five_prime_UTR | 37872275 | 37872285 | 37872275 | ID=Msa0069420-mRNA-1:five_prime_utr;Parent=Msa0069420-mRNA-1 |
chr1_2 | CDS | 37872286 | 37874055 | 37872286 | ID=Msa0069420-mRNA-1:cds;Parent=Msa0069420-mRNA-1 |
chr1_2 | three_prime_UTR | 37874056 | 37874419 | 37874056 | ID=Msa0069420-mRNA-1:three_prime_utr;Parent=Msa0069420-mRNA-1 |
Gene Sequence |
Protein sequence |