AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0070750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0070750 MtrunA17_Chr1g0176241 99.586 483 2 0 1 483 1 483 0.0 1000
Msa0070750 MtrunA17_Chr1g0172771 77.647 85 18 1 289 372 21 105 3.80e-39 138
Msa0070750 MtrunA17_Chr1g0185501 29.940 334 185 8 156 482 22 313 4.70e-37 138
Msa0070750 MtrunA17_Chr1g0185501 30.164 305 186 8 110 397 18 312 3.32e-27 111
Msa0070750 MtrunA17_Chr1g0185501 36.719 128 78 2 354 481 14 138 1.46e-20 92.4
Msa0070750 MtrunA17_Chr4g0067151 29.032 341 186 8 156 481 22 321 2.31e-35 134
Msa0070750 MtrunA17_Chr4g0067151 27.326 344 192 10 112 439 20 321 4.65e-27 111
Msa0070750 MtrunA17_Chr4g0067151 26.190 210 144 5 107 310 108 312 7.68e-15 75.5
Msa0070750 MtrunA17_Chr1g0172761 84.058 69 11 0 415 483 6 74 9.01e-34 122
Msa0070750 MtrunA17_Chr1g0172781 82.540 63 11 0 204 266 2 64 5.83e-30 111
Msa0070750 MtrunA17_Chr5g0401661 30.484 351 173 9 159 481 333 640 4.75e-28 117
Msa0070750 MtrunA17_Chr5g0401661 27.273 363 220 11 115 442 331 684 3.33e-24 106
Msa0070750 MtrunA17_Chr5g0401661 27.434 226 116 6 113 291 431 655 2.12e-14 75.9
Msa0070750 MtrunA17_Chr5g0401671 30.721 319 173 12 200 481 243 550 7.32e-28 117
Msa0070750 MtrunA17_Chr5g0401671 27.147 361 221 11 115 442 243 594 4.96e-25 108
Msa0070750 MtrunA17_Chr5g0401671 26.496 351 206 12 159 471 245 581 2.50e-22 100
Msa0070750 MtrunA17_Chr4g0053651 27.083 384 208 11 115 471 226 564 8.94e-28 116
Msa0070750 MtrunA17_Chr4g0053651 30.925 346 176 11 159 481 228 533 1.86e-27 115
Msa0070750 MtrunA17_Chr7g0253861 28.618 304 183 11 115 396 51 342 2.75e-27 112
Msa0070750 MtrunA17_Chr7g0253861 27.304 293 160 8 200 481 51 301 6.10e-22 97.1
Msa0070750 MtrunA17_Chr1g0200901 27.746 346 217 13 114 442 75 404 5.58e-23 100
Msa0070750 MtrunA17_Chr1g0200901 23.793 290 133 6 112 317 116 401 3.47e-17 83.6
Msa0070750 MtrunA17_Chr1g0200901 27.350 234 150 8 261 481 93 319 3.53e-15 77.4
Msa0070750 MtrunA17_Chr4g0059031 28.044 271 172 7 234 482 385 654 1.11e-21 99.0
Msa0070750 MtrunA17_Chr4g0059031 28.351 194 124 7 95 277 34 223 2.92e-12 69.3
Msa0070750 MtrunA17_Chr6g0448921 30.638 235 154 6 246 472 12 245 1.62e-21 98.2
Msa0070750 MtrunA17_Chr6g0448921 29.412 187 123 5 132 315 30 210 1.08e-19 92.4
Msa0070750 MtrunA17_Chr6g0448921 26.984 189 130 4 114 300 54 236 7.86e-14 73.9
Msa0070750 MtrunA17_Chr6g0448921 30.667 150 97 3 114 262 96 239 2.37e-12 69.3
Msa0070750 MtrunA17_Chr6g0448921 28.205 234 142 11 222 439 30 253 8.45e-11 64.7
Msa0070750 MtrunA17_Chr3g0136971 32.796 186 114 6 117 297 459 638 2.51e-21 97.4
Msa0070750 MtrunA17_Chr3g0136971 29.703 202 133 5 117 315 417 612 1.63e-17 85.5
Msa0070750 MtrunA17_Chr3g0136971 25.152 330 188 7 154 481 342 614 6.52e-17 83.6
Msa0070750 MtrunA17_Chr3g0136971 28.676 136 87 3 104 239 492 617 6.74e-12 67.8
Msa0070750 MtrunA17_Chr2g0281451 27.799 259 144 7 221 475 28 247 4.09e-21 97.1
Msa0070750 MtrunA17_Chr2g0281451 29.237 236 152 9 132 358 29 258 1.01e-18 89.7
Msa0070750 MtrunA17_Chr2g0281451 24.370 238 141 3 246 481 11 211 6.69e-16 80.9
Msa0070750 MtrunA17_Chr2g0281451 27.513 189 129 4 113 299 52 234 7.72e-13 71.2
Msa0070750 MtrunA17_Chr2g0281451 28.302 159 106 4 114 270 95 247 1.46e-12 70.5
Msa0070750 MtrunA17_Chr8g0392701 25.348 359 191 12 114 441 10 322 4.27e-20 91.3
Msa0070750 MtrunA17_Chr8g0392701 29.016 193 87 2 339 481 28 220 1.06e-17 84.0
Msa0070750 MtrunA17_Chr8g0392701 26.062 353 192 14 156 481 10 320 1.16e-15 78.2
Msa0070750 MtrunA17_Chr1g0197551 25.237 317 213 9 162 472 10 308 4.46e-18 87.8
Msa0070750 MtrunA17_Chr1g0197551 26.066 211 121 6 108 288 82 287 7.43e-15 77.8
Msa0070750 MtrunA17_Chr4g0069701 28.627 255 162 5 244 481 400 651 6.14e-18 87.0
Msa0070750 MtrunA17_Chr4g0069701 31.013 158 100 4 121 276 67 217 8.76e-13 70.9
Msa0070750 MtrunA17_Chr4g0069701 30.921 152 99 4 333 481 69 217 1.50e-12 70.1
Msa0070750 MtrunA17_Chr4g0069701 29.091 165 109 4 122 284 543 701 1.45e-11 67.0
Msa0070750 MtrunA17_Chr4g0069701 23.410 393 244 15 102 481 345 693 7.10e-11 64.7
Msa0070750 MtrunA17_Chr3g0144511 24.566 346 205 10 156 481 60 369 7.13e-18 85.1
Msa0070750 MtrunA17_Chr3g0144511 21.765 340 205 13 111 411 57 374 2.41e-12 68.6
Msa0070750 MtrunA17_Chr1g0172501 32.394 213 128 7 114 319 351 554 9.03e-18 86.3
Msa0070750 MtrunA17_Chr1g0172501 24.439 401 234 14 60 439 200 552 2.41e-16 81.6
Msa0070750 MtrunA17_Chr1g0172501 26.855 283 177 8 222 483 239 512 6.81e-16 80.1
Msa0070750 MtrunA17_Chr1g0172501 24.749 299 170 12 113 403 308 559 6.93e-16 80.1
Msa0070750 MtrunA17_Chr1g0172501 22.832 346 213 9 138 481 259 552 6.81e-15 77.0
Msa0070750 MtrunA17_Chr4g0070791 29.583 240 143 7 109 332 92 321 1.17e-17 84.0
Msa0070750 MtrunA17_Chr3g0093681 32.394 213 128 7 114 319 351 554 1.88e-17 85.1
Msa0070750 MtrunA17_Chr3g0093681 24.439 401 234 14 60 439 200 552 3.86e-16 80.9
Msa0070750 MtrunA17_Chr3g0093681 26.855 283 177 8 222 483 239 512 8.28e-16 80.1
Msa0070750 MtrunA17_Chr3g0093681 24.749 299 170 12 113 403 308 559 1.61e-15 79.0
Msa0070750 MtrunA17_Chr3g0093681 22.832 346 213 9 138 481 259 552 1.32e-14 76.3
Msa0070750 MtrunA17_Chr7g0233651 26.557 305 163 10 111 398 153 413 1.98e-17 84.3
Msa0070750 MtrunA17_Chr7g0233651 26.415 265 171 12 237 481 152 412 1.50e-13 72.4
Msa0070750 MtrunA17_Chr5g0405851 31.455 213 130 7 114 319 248 451 2.18e-17 84.3
Msa0070750 MtrunA17_Chr5g0405851 32.456 114 77 0 368 481 251 364 2.31e-16 81.3
Msa0070750 MtrunA17_Chr5g0405851 24.590 305 167 11 113 398 190 450 2.91e-16 80.9
Msa0070750 MtrunA17_Chr5g0405851 22.350 349 188 9 138 483 141 409 1.37e-13 72.8
Msa0070750 MtrunA17_Chr2g0295791 28.629 248 164 7 115 355 166 407 3.11e-17 84.0
Msa0070750 MtrunA17_Chr2g0295791 32.143 140 94 1 342 481 185 323 1.91e-15 78.6
Msa0070750 MtrunA17_Chr2g0295791 23.353 334 202 11 158 481 167 456 6.68e-13 70.9
Msa0070750 MtrunA17_Chr2g0295791 27.586 116 84 0 366 481 166 281 3.44e-11 65.5
Msa0070750 MtrunA17_Chr5g0442391 27.213 305 186 12 160 443 263 552 9.36e-17 83.2
Msa0070750 MtrunA17_Chr1g0194721 23.724 392 221 14 115 441 238 616 1.90e-16 82.8
Msa0070750 MtrunA17_Chr2g0284241 23.101 316 186 9 110 411 41 313 2.46e-16 80.1
Msa0070750 MtrunA17_Chr7g0266251 25.201 373 191 16 115 441 12 342 2.63e-16 80.1
Msa0070750 MtrunA17_Chr7g0266251 29.630 162 103 4 331 481 24 185 6.63e-13 69.7
Msa0070750 MtrunA17_Chr7g0266251 25.000 316 166 13 200 482 12 289 3.24e-12 67.8
Msa0070750 MtrunA17_Chr7g0266251 28.571 210 121 9 93 278 33 237 5.34e-11 63.9
Msa0070750 MtrunA17_Chr4g0035611 24.074 324 208 10 162 472 10 308 3.67e-16 81.6
Msa0070750 MtrunA17_Chr4g0035611 24.645 211 124 5 108 288 82 287 3.10e-14 75.9
Msa0070750 MtrunA17_Chr4g0035611 28.144 167 92 4 342 481 66 231 2.48e-11 66.6
Msa0070750 MtrunA17_Chr8g0390861 24.490 343 209 13 130 440 880 1204 5.11e-16 81.3
Msa0070750 MtrunA17_Chr8g0390861 26.838 272 160 10 115 359 949 1208 1.07e-13 73.9
Msa0070750 MtrunA17_Chr8g0390861 26.054 261 164 9 200 440 853 1104 2.86e-13 72.8
Msa0070750 MtrunA17_Chr8g0390861 27.660 141 98 3 342 481 884 1021 1.92e-11 66.6
Msa0070750 MtrunA17_Chr8g0352821 23.693 287 174 7 199 482 178 422 7.88e-16 80.5
Msa0070750 MtrunA17_Chr8g0352821 29.730 185 120 5 97 276 285 464 5.92e-15 77.8
Msa0070750 MtrunA17_Chr8g0352821 29.098 244 161 7 108 345 256 493 6.88e-15 77.4
Msa0070750 MtrunA17_Chr8g0352821 23.894 339 194 13 109 439 182 464 5.93e-13 71.2
Msa0070750 MtrunA17_Chr7g0228191 26.280 293 181 14 217 481 32 317 2.62e-15 77.0
Msa0070750 MtrunA17_Chr8g0392731 24.476 429 250 20 117 481 145 563 3.82e-15 78.2
Msa0070750 MtrunA17_Chr2g0331981 27.586 203 138 5 122 319 60 258 5.82e-15 77.8
Msa0070750 MtrunA17_Chr2g0331981 32.558 129 78 5 111 236 134 256 1.02e-12 70.9
Msa0070750 MtrunA17_Chr2g0331981 31.469 143 95 2 342 481 114 256 4.06e-12 68.9
Msa0070750 MtrunA17_Chr2g0292301 32.787 122 81 1 360 481 200 320 6.18e-15 77.0
Msa0070750 MtrunA17_Chr4g0004241 27.586 203 138 5 122 319 60 258 7.41e-15 77.4
Msa0070750 MtrunA17_Chr4g0004241 32.558 129 78 5 111 236 134 256 9.42e-13 70.9
Msa0070750 MtrunA17_Chr4g0004241 31.469 143 95 2 342 481 114 256 5.58e-12 68.6
Msa0070750 MtrunA17_Chr4g0058091 27.660 141 101 1 342 481 202 342 8.80e-15 76.6
Msa0070750 MtrunA17_Chr4g0058091 25.630 238 146 7 264 481 245 471 8.76e-12 67.4
Msa0070750 MtrunA17_Chr3g0095501 23.188 345 207 12 150 481 256 555 9.63e-15 76.6
Msa0070750 MtrunA17_Chr1g0185891 23.235 340 207 9 154 481 286 583 1.53e-14 76.3
Msa0070750 MtrunA17_Chr5g0395821 27.778 252 152 11 253 481 182 426 2.78e-14 74.7
Msa0070750 MtrunA17_Chr5g0395821 25.170 294 157 10 122 399 182 428 3.61e-13 71.2
Msa0070750 MtrunA17_Chr4g0057141 23.529 340 206 9 154 481 347 644 2.80e-14 75.5
Msa0070750 MtrunA17_Chr3g0111961 24.521 261 180 10 235 481 203 460 1.15e-13 73.2
Msa0070750 MtrunA17_Chr3g0099061 23.611 360 212 10 100 439 195 511 2.52e-13 72.0
Msa0070750 MtrunA17_Chr3g0099061 34.821 112 64 2 378 480 222 333 3.26e-12 68.6
Msa0070750 MtrunA17_Chr3g0099061 27.368 190 109 4 255 443 219 380 3.89e-12 68.6
Msa0070750 MtrunA17_Chr7g0267961 26.786 280 178 12 225 481 153 428 3.14e-13 71.6
Msa0070750 MtrunA17_Chr3g0098921 24.837 306 160 11 114 399 178 433 3.90e-13 71.2
Msa0070750 MtrunA17_Chr3g0098921 25.000 272 174 13 235 481 165 431 6.55e-12 67.4
Msa0070750 MtrunA17_Chr3g0116561 25.630 238 146 7 264 481 240 466 5.34e-13 71.2
Msa0070750 MtrunA17_Chr3g0116561 22.695 141 108 1 342 481 197 337 2.04e-11 66.2
Msa0070750 MtrunA17_Chr1g0162961 27.174 276 134 13 167 418 82 314 8.05e-13 70.1
Msa0070750 MtrunA17_Chr1g0208291 38.182 110 60 3 337 441 156 262 8.80e-13 70.5
Msa0070750 MtrunA17_Chr4g0026671 22.938 388 224 12 118 450 12 379 1.26e-12 70.5
Msa0070750 MtrunA17_Chr8g0377441 33.766 154 91 6 339 481 236 389 1.26e-12 69.7
Msa0070750 MtrunA17_Chr2g0331961 32.168 143 94 2 342 481 116 258 1.62e-12 68.6
Msa0070750 MtrunA17_Chr2g0331961 33.846 130 77 5 111 237 136 259 3.71e-12 67.4
Msa0070750 MtrunA17_Chr7g0234591 27.528 178 110 5 122 287 165 335 3.38e-12 68.2
Msa0070750 MtrunA17_Chr7g0220291 25.746 268 147 11 167 418 85 316 3.92e-12 68.2
Msa0070750 MtrunA17_Chr7g0235181 25.347 288 181 12 221 481 122 402 6.71e-12 67.4
Msa0070750 MtrunA17_Chr1g0148791 25.424 295 159 11 113 397 658 901 9.96e-12 67.4
Msa0070750 MtrunA17_Chr2g0321211 23.377 385 222 16 118 450 12 375 1.14e-11 67.4
Msa0070750 MtrunA17_Chr8g0383711 19.820 333 206 10 159 481 16 297 1.58e-11 65.1
Msa0070750 MtrunA17_Chr7g0246741 24.638 207 136 6 248 440 367 567 3.48e-11 65.9
Msa0070750 MtrunA17_Chr8g0384061 23.279 305 177 9 115 398 226 494 3.50e-11 65.5
Msa0070750 MtrunA17_Chr4g0057721 27.317 205 119 6 120 300 14 212 3.54e-11 65.1
Msa0070750 MtrunA17_Chr2g0285951 28.319 113 81 0 369 481 29 141 6.86e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0070750 AT5G52820.1 78.280 465 99 2 20 483 10 473 0.0 777
Msa0070750 AT4G02730.1 29.464 336 187 9 154 481 36 329 2.06e-36 137
Msa0070750 AT4G02730.1 27.243 301 193 7 114 397 38 329 6.43e-26 108
Msa0070750 AT4G02730.1 33.846 130 82 3 353 481 29 155 1.81e-19 89.7
Msa0070750 AT3G49660.1 30.473 338 183 10 112 439 17 312 4.53e-34 130
Msa0070750 AT3G49660.1 26.866 335 195 7 156 481 19 312 1.87e-32 126
Msa0070750 AT3G49660.1 31.176 170 111 5 110 276 146 312 1.04e-12 69.3
Msa0070750 AT5G67320.1 28.451 355 173 11 159 481 263 568 8.60e-26 111
Msa0070750 AT5G67320.1 25.515 388 193 13 115 442 261 612 6.76e-23 102
Msa0070750 AT5G67320.1 27.347 245 123 9 97 291 344 583 6.87e-12 68.2
Msa0070750 AT5G67320.1 25.962 312 155 13 200 481 261 526 2.67e-11 66.2
Msa0070750 AT2G43770.1 25.364 343 192 11 115 441 49 343 4.37e-24 103
Msa0070750 AT2G43770.1 25.939 293 164 8 200 481 49 299 5.54e-20 91.7
Msa0070750 AT5G16750.1 29.779 272 168 7 232 481 382 652 1.34e-22 102
Msa0070750 AT5G16750.1 23.743 358 207 10 112 449 351 662 1.52e-13 73.9
Msa0070750 AT5G16750.1 26.316 171 116 5 113 277 54 220 4.57e-12 68.9
Msa0070750 AT5G16750.1 24.915 293 172 13 42 319 341 600 5.79e-12 68.9
Msa0070750 AT5G16750.1 34.167 120 73 2 368 481 100 219 1.36e-11 67.4
Msa0070750 AT1G61210.1 27.099 262 151 6 222 481 29 252 1.63e-22 102
Msa0070750 AT1G61210.1 27.642 246 145 8 131 358 28 258 1.23e-19 93.2
Msa0070750 AT1G61210.1 23.950 238 142 3 246 481 11 211 7.68e-15 78.2
Msa0070750 AT1G61210.1 27.711 166 107 4 115 276 96 252 2.26e-11 67.0
Msa0070750 AT1G61210.3 27.099 262 151 6 222 481 29 252 1.67e-22 102
Msa0070750 AT1G61210.3 27.642 246 145 8 131 358 28 258 1.22e-19 93.2
Msa0070750 AT1G61210.3 23.950 238 142 3 246 481 11 211 5.42e-15 78.6
Msa0070750 AT1G61210.3 27.711 166 107 4 115 276 96 252 1.83e-11 67.4
Msa0070750 AT1G61210.2 27.099 262 151 6 222 481 29 252 1.75e-22 102
Msa0070750 AT1G61210.2 27.642 246 145 8 131 358 28 258 1.43e-19 92.8
Msa0070750 AT1G61210.2 23.950 238 142 3 246 481 11 211 7.74e-15 78.2
Msa0070750 AT1G61210.2 27.711 166 107 4 115 276 96 252 2.40e-11 67.0
Msa0070750 AT5G25150.2 32.796 186 114 6 117 297 458 637 3.27e-22 100
Msa0070750 AT5G25150.2 25.228 329 185 6 154 481 345 613 8.16e-18 87.0
Msa0070750 AT5G25150.2 30.172 232 152 6 105 332 403 628 1.26e-17 86.3
Msa0070750 AT5G25150.2 22.956 318 182 8 126 441 359 615 3.15e-14 75.9
Msa0070750 AT5G25150.2 32.353 136 82 3 104 239 491 616 5.20e-14 75.1
Msa0070750 AT5G25150.1 32.796 186 114 6 117 297 458 637 3.29e-22 100
Msa0070750 AT5G25150.1 25.228 329 185 6 154 481 345 613 6.93e-18 87.0
Msa0070750 AT5G25150.1 22.956 318 182 8 126 441 359 615 2.85e-14 75.9
Msa0070750 AT5G25150.1 32.353 136 82 3 104 239 491 616 5.65e-14 75.1
Msa0070750 AT1G71840.1 26.957 345 223 12 114 440 65 398 3.62e-22 99.0
Msa0070750 AT1G71840.1 28.216 241 140 9 263 481 85 314 5.76e-16 80.1
Msa0070750 AT5G50230.1 24.242 330 211 7 111 439 217 508 5.66e-21 96.3
Msa0070750 AT5G50230.1 24.583 240 150 6 262 481 238 466 1.34e-13 73.6
Msa0070750 AT5G50230.1 24.113 141 106 1 342 481 197 337 1.23e-11 67.4
Msa0070750 AT1G11160.2 26.562 256 149 5 222 475 29 247 5.68e-21 97.1
Msa0070750 AT1G11160.2 30.081 246 137 10 132 358 29 258 9.54e-21 96.3
Msa0070750 AT1G11160.2 23.950 238 142 3 246 481 11 211 3.25e-16 82.4
Msa0070750 AT1G11160.2 28.221 163 110 3 115 276 96 252 1.47e-11 67.4
Msa0070750 AT1G11160.1 26.562 256 149 5 222 475 29 247 6.22e-21 97.1
Msa0070750 AT1G11160.1 30.081 246 137 10 132 358 29 258 9.38e-21 96.7
Msa0070750 AT1G11160.1 23.950 238 142 3 246 481 11 211 3.37e-16 82.4
Msa0070750 AT1G11160.1 28.221 163 110 3 115 276 96 252 1.44e-11 67.4
Msa0070750 AT1G11160.4 26.562 256 149 5 222 475 29 247 7.49e-21 96.7
Msa0070750 AT1G11160.4 30.081 246 137 10 132 358 29 258 1.25e-20 95.9
Msa0070750 AT1G11160.4 23.950 238 142 3 246 481 11 211 3.87e-16 82.0
Msa0070750 AT1G11160.4 28.221 163 110 3 115 276 96 252 1.70e-11 67.4
Msa0070750 AT1G11160.3 28.139 231 128 4 246 475 12 205 8.17e-21 96.7
Msa0070750 AT1G11160.3 28.571 140 99 1 342 481 31 169 1.98e-14 76.6
Msa0070750 AT1G11160.3 32.759 116 78 0 366 481 12 127 2.44e-14 76.3
Msa0070750 AT1G11160.3 25.379 264 126 8 111 358 8 216 3.58e-12 69.3
Msa0070750 AT1G48630.1 31.174 247 122 7 246 481 11 220 1.17e-20 93.2
Msa0070750 AT1G48630.1 25.278 360 191 14 114 441 10 323 8.97e-20 90.5
Msa0070750 AT4G34460.1 25.797 345 201 11 156 481 60 368 4.01e-20 92.4
Msa0070750 AT4G34460.1 22.985 335 206 13 111 411 57 373 4.43e-11 65.1
Msa0070750 AT5G23430.3 28.226 248 160 6 246 481 12 253 5.66e-20 94.0
Msa0070750 AT5G23430.3 30.481 187 121 5 132 315 30 210 3.77e-19 91.3
Msa0070750 AT5G23430.3 29.940 167 108 5 114 277 96 256 5.61e-13 72.0
Msa0070750 AT5G23430.3 25.434 173 121 4 114 284 54 220 3.89e-11 66.2
Msa0070750 AT5G23430.2 28.226 248 160 6 246 481 12 253 5.66e-20 94.0
Msa0070750 AT5G23430.2 30.481 187 121 5 132 315 30 210 3.77e-19 91.3
Msa0070750 AT5G23430.2 29.940 167 108 5 114 277 96 256 5.61e-13 72.0
Msa0070750 AT5G23430.2 25.434 173 121 4 114 284 54 220 3.89e-11 66.2
Msa0070750 AT4G34460.4 25.507 345 202 11 156 481 55 363 5.75e-20 92.0
Msa0070750 AT4G34460.4 22.985 335 206 13 111 411 52 368 5.46e-11 64.7
Msa0070750 AT5G23430.1 28.226 248 160 6 246 481 12 253 5.92e-20 94.0
Msa0070750 AT5G23430.1 30.481 187 121 5 132 315 30 210 3.81e-19 91.3
Msa0070750 AT5G23430.1 29.940 167 108 5 114 277 96 256 5.71e-13 72.0
Msa0070750 AT5G23430.1 25.434 173 121 4 114 284 54 220 3.69e-11 66.2
Msa0070750 AT5G08390.1 31.016 187 120 5 132 315 30 210 1.37e-19 92.8
Msa0070750 AT5G08390.1 29.098 244 163 7 246 481 12 253 1.53e-19 92.4
Msa0070750 AT5G08390.1 30.000 150 98 3 114 262 96 239 6.08e-13 72.0
Msa0070750 AT5G08390.1 25.434 173 121 4 114 284 54 220 5.10e-11 65.9
Msa0070750 AT3G18130.1 25.348 359 190 13 115 441 11 323 3.51e-19 89.0
Msa0070750 AT3G18130.1 30.645 248 124 7 245 481 10 220 5.89e-19 88.2
Msa0070750 AT3G18130.1 25.641 351 191 13 159 481 13 321 1.13e-15 78.6
Msa0070750 AT4G34460.2 25.223 337 197 11 164 481 6 306 6.64e-19 87.8
Msa0070750 AT2G47410.4 22.775 382 227 12 115 441 50 418 3.91e-18 88.6
Msa0070750 AT2G47410.1 22.775 382 227 12 115 441 232 600 4.80e-18 88.2
Msa0070750 AT2G47410.2 22.775 382 227 12 115 441 231 599 4.92e-18 88.2
Msa0070750 AT1G18080.1 24.931 361 192 14 114 441 10 324 8.36e-18 84.7
Msa0070750 AT1G18080.1 31.174 247 119 8 248 481 13 221 8.04e-17 82.0
Msa0070750 AT1G18080.1 26.816 358 185 16 156 481 10 322 5.03e-15 76.6
Msa0070750 AT2G41500.1 24.118 340 160 10 147 483 251 495 8.58e-18 86.7
Msa0070750 AT2G41500.1 28.774 212 137 6 114 319 334 537 9.99e-18 86.3
Msa0070750 AT2G41500.1 24.161 298 175 9 108 400 287 538 6.13e-15 77.8
Msa0070750 AT2G41500.1 22.936 327 204 8 117 439 253 535 7.00e-15 77.4
Msa0070750 AT2G41500.2 24.118 340 160 10 147 483 251 495 8.58e-18 86.7
Msa0070750 AT2G41500.2 28.774 212 137 6 114 319 334 537 9.99e-18 86.3
Msa0070750 AT2G41500.2 24.161 298 175 9 108 400 287 538 6.13e-15 77.8
Msa0070750 AT2G41500.2 22.936 327 204 8 117 439 253 535 7.00e-15 77.4
Msa0070750 AT2G26060.1 26.486 370 198 14 115 444 16 351 2.96e-17 83.6
Msa0070750 AT2G26060.1 24.051 316 170 12 200 482 16 294 2.55e-11 65.5
Msa0070750 AT4G15900.1 28.112 249 164 8 115 355 172 413 3.87e-17 84.3
Msa0070750 AT4G15900.1 33.099 142 94 1 340 481 189 329 1.19e-14 76.6
Msa0070750 AT4G15900.1 25.641 234 162 6 109 339 250 474 3.23e-12 68.9
Msa0070750 AT4G15900.1 28.448 116 83 0 366 481 172 287 3.44e-12 68.9
Msa0070750 AT4G29830.1 26.829 246 148 5 262 481 31 270 1.15e-16 81.3
Msa0070750 AT4G29830.1 29.952 207 124 6 109 299 92 293 6.19e-14 73.2
Msa0070750 AT4G29830.1 25.519 337 207 11 159 481 12 318 4.57e-13 70.5
Msa0070750 AT3G15980.5 26.006 323 208 9 122 439 60 356 1.18e-16 83.6
Msa0070750 AT3G15980.5 32.558 129 78 5 111 236 134 256 1.67e-12 70.5
Msa0070750 AT3G15980.5 32.639 144 92 4 342 481 114 256 2.66e-12 69.7
Msa0070750 AT2G21390.1 24.606 317 215 9 162 472 10 308 1.36e-16 83.6
Msa0070750 AT2G21390.1 22.878 271 171 6 109 352 83 342 5.96e-13 72.0
Msa0070750 AT2G21390.1 28.144 167 92 4 342 481 66 231 6.34e-11 65.5
Msa0070750 AT2G47410.5 22.195 410 243 12 115 481 232 608 2.18e-16 83.2
Msa0070750 AT3G16650.1 25.911 247 171 4 115 355 166 406 2.39e-16 81.6
Msa0070750 AT3G16650.1 30.172 116 81 0 366 481 166 281 1.75e-13 72.8
Msa0070750 AT3G16650.1 33.099 142 93 2 340 481 183 322 2.78e-13 72.4
Msa0070750 AT5G13480.2 23.511 319 197 8 167 481 140 415 2.54e-16 82.4
Msa0070750 AT5G13480.2 23.864 264 161 6 222 482 147 373 9.75e-16 80.5
Msa0070750 AT5G13480.2 29.730 185 120 5 97 276 236 415 6.45e-15 77.8
Msa0070750 AT5G13480.2 29.577 213 139 6 108 315 207 413 1.68e-14 76.6
Msa0070750 AT5G13480.2 25.970 335 219 12 79 397 94 415 1.73e-14 76.6
Msa0070750 AT2G47410.6 22.195 410 243 12 115 481 50 426 2.87e-16 82.4
Msa0070750 AT2G47410.3 22.195 410 243 12 115 481 50 426 2.87e-16 82.4
Msa0070750 AT5G13480.3 23.511 319 197 8 167 481 117 392 3.51e-16 81.6
Msa0070750 AT5G13480.3 23.864 264 161 6 222 482 124 350 1.29e-15 80.1
Msa0070750 AT5G13480.3 29.730 185 120 5 97 276 213 392 1.00e-14 77.0
Msa0070750 AT5G13480.3 25.135 370 220 13 79 439 71 392 2.42e-14 75.9
Msa0070750 AT1G62020.1 24.290 317 216 9 162 472 10 308 3.62e-16 82.4
Msa0070750 AT1G62020.1 24.623 199 121 5 109 280 83 279 2.32e-12 70.1
Msa0070750 AT1G62020.1 28.743 167 91 4 342 481 66 231 1.78e-11 67.4
Msa0070750 AT5G13480.1 23.511 319 197 8 167 481 129 404 4.34e-16 81.6
Msa0070750 AT5G13480.1 23.864 264 161 6 222 482 136 362 1.42e-15 79.7
Msa0070750 AT5G13480.1 29.730 185 120 5 97 276 225 404 1.06e-14 77.0
Msa0070750 AT5G13480.1 25.135 370 220 13 79 439 83 404 2.95e-14 75.9
Msa0070750 AT5G13480.4 23.511 319 197 8 167 481 117 392 4.51e-16 81.3
Msa0070750 AT5G13480.4 23.864 264 161 6 222 482 124 350 1.41e-15 79.7
Msa0070750 AT5G13480.4 29.730 185 120 5 97 276 213 392 1.09e-14 77.0
Msa0070750 AT5G13480.4 25.135 370 220 13 79 439 71 392 2.55e-14 75.9
Msa0070750 AT1G49040.1 24.000 400 216 14 114 481 838 1181 8.81e-16 80.9
Msa0070750 AT3G15980.1 28.426 197 132 5 122 313 60 252 8.94e-16 80.9
Msa0070750 AT3G15980.1 32.558 129 78 5 111 236 134 256 1.37e-12 70.9
Msa0070750 AT3G15980.1 32.639 144 92 4 342 481 114 256 2.44e-12 70.1
Msa0070750 AT3G15980.7 28.426 197 132 5 122 313 60 252 1.04e-15 80.5
Msa0070750 AT3G15980.7 32.558 129 78 5 111 236 134 256 1.59e-12 70.5
Msa0070750 AT3G15980.7 32.639 144 92 4 342 481 114 256 2.53e-12 70.1
Msa0070750 AT3G15980.3 28.426 197 132 5 122 313 60 252 1.11e-15 80.5
Msa0070750 AT3G15980.3 32.558 129 78 5 111 236 134 256 1.71e-12 70.5
Msa0070750 AT3G15980.3 32.639 144 92 4 342 481 114 256 2.51e-12 70.1
Msa0070750 AT3G15980.6 28.426 197 132 5 122 313 60 252 1.11e-15 80.5
Msa0070750 AT3G15980.6 32.558 129 78 5 111 236 134 256 1.71e-12 70.5
Msa0070750 AT3G15980.6 32.639 144 92 4 342 481 114 256 2.51e-12 70.1
Msa0070750 AT3G15980.2 28.426 197 132 5 122 313 60 252 1.11e-15 80.5
Msa0070750 AT3G15980.2 32.558 129 78 5 111 236 134 256 1.71e-12 70.5
Msa0070750 AT3G15980.2 32.639 144 92 4 342 481 114 256 2.51e-12 70.1
Msa0070750 AT3G15980.4 28.426 197 132 5 122 313 60 252 1.11e-15 80.5
Msa0070750 AT3G15980.4 32.558 129 78 5 111 236 134 256 1.71e-12 70.5
Msa0070750 AT3G15980.4 32.639 144 92 4 342 481 114 256 2.51e-12 70.1
Msa0070750 AT1G10580.1 27.358 318 195 14 187 481 268 572 1.16e-15 80.1
Msa0070750 AT2G01330.1 25.000 436 241 18 117 481 143 563 1.92e-15 79.3
Msa0070750 AT2G01330.1 28.054 221 135 8 240 441 47 262 3.14e-12 69.3
Msa0070750 AT1G79990.2 27.919 197 133 5 122 313 60 252 3.38e-15 79.0
Msa0070750 AT1G79990.2 33.333 129 77 5 111 236 134 256 8.27e-13 71.6
Msa0070750 AT1G79990.2 31.469 143 95 2 342 481 114 256 8.94e-13 71.2
Msa0070750 AT1G79990.1 27.919 197 133 5 122 313 60 252 3.52e-15 79.0
Msa0070750 AT1G79990.1 31.469 143 95 2 342 481 114 256 8.74e-13 71.2
Msa0070750 AT1G79990.1 33.333 129 77 5 111 236 134 256 8.82e-13 71.2
Msa0070750 AT1G52360.3 27.919 197 133 5 122 313 60 252 3.68e-15 79.0
Msa0070750 AT1G52360.3 32.558 129 78 5 111 236 134 256 1.46e-12 70.9
Msa0070750 AT1G52360.3 31.469 143 95 2 342 481 114 256 4.63e-12 68.9
Msa0070750 AT1G52360.4 27.919 197 133 5 122 313 60 252 3.78e-15 79.0
Msa0070750 AT1G52360.4 32.558 129 78 5 111 236 134 256 1.61e-12 70.5
Msa0070750 AT1G52360.4 31.469 143 95 2 342 481 114 256 4.29e-12 69.3
Msa0070750 AT1G52360.1 27.919 197 133 5 122 313 60 252 3.78e-15 79.0
Msa0070750 AT1G52360.1 32.558 129 78 5 111 236 134 256 1.61e-12 70.5
Msa0070750 AT1G52360.1 31.469 143 95 2 342 481 114 256 4.29e-12 69.3
Msa0070750 AT1G52360.2 27.919 197 133 5 122 313 104 296 4.25e-15 78.6
Msa0070750 AT1G52360.2 32.558 129 78 5 111 236 178 300 1.73e-12 70.5
Msa0070750 AT1G52360.2 31.469 143 95 2 342 481 158 300 3.83e-12 69.3
Msa0070750 AT4G33260.1 27.273 286 167 12 140 398 149 420 1.19e-14 76.3
Msa0070750 AT4G33260.1 25.540 278 174 12 230 481 149 419 8.39e-13 70.9
Msa0070750 AT4G33270.1 27.273 286 167 12 140 398 159 430 1.31e-14 76.3
Msa0070750 AT4G33270.1 25.540 278 174 12 230 481 159 429 1.03e-12 70.5
Msa0070750 AT2G26060.2 26.579 380 181 16 115 464 16 327 3.37e-14 74.3
Msa0070750 AT2G26060.2 29.530 149 96 3 342 481 42 190 1.79e-11 65.9
Msa0070750 AT2G26060.2 24.051 316 170 12 200 482 16 294 1.90e-11 65.9
Msa0070750 AT3G05090.2 24.101 278 181 8 224 480 55 323 9.54e-14 74.3
Msa0070750 AT3G05090.3 24.101 278 181 8 224 480 55 323 9.54e-14 74.3
Msa0070750 AT3G05090.1 24.101 278 181 8 224 480 55 323 9.54e-14 74.3
Msa0070750 AT1G73720.1 35.135 111 64 1 378 480 221 331 1.53e-13 73.2
Msa0070750 AT1G73720.1 26.126 333 182 11 127 439 221 509 6.84e-13 71.2
Msa0070750 AT1G73720.1 27.895 190 107 5 255 443 218 378 9.07e-12 67.8
Msa0070750 AT1G73720.1 31.858 113 77 0 369 481 262 374 8.94e-11 64.7
Msa0070750 AT4G32990.1 25.069 363 188 17 115 444 16 327 2.99e-13 71.2
Msa0070750 AT2G32700.7 22.436 312 168 6 122 397 532 805 3.18e-13 72.8
Msa0070750 AT2G32700.6 22.436 312 168 6 122 397 511 784 3.39e-13 72.4
Msa0070750 AT2G32700.2 22.436 312 168 6 122 397 513 786 3.51e-13 72.4
Msa0070750 AT2G32700.5 22.436 312 168 6 122 397 513 786 3.51e-13 72.4
Msa0070750 AT2G32700.1 22.436 312 168 6 122 397 513 786 3.51e-13 72.4
Msa0070750 AT2G32700.4 22.436 312 168 6 122 397 513 786 3.51e-13 72.4
Msa0070750 AT2G32700.3 22.436 312 168 6 122 397 513 786 3.51e-13 72.4
Msa0070750 AT4G22910.1 24.621 264 176 10 235 481 200 457 5.61e-13 71.2
Msa0070750 AT1G15440.2 24.125 257 156 5 228 481 326 546 6.20e-13 71.6
Msa0070750 AT1G15440.2 28.037 214 139 8 111 319 383 586 3.49e-12 69.3
Msa0070750 AT5G13840.1 23.755 261 182 10 235 481 198 455 6.49e-13 71.2
Msa0070750 AT5G13840.1 32.576 132 86 2 351 481 196 325 4.43e-11 65.5
Msa0070750 AT5G13840.2 23.755 261 182 10 235 481 198 455 6.49e-13 71.2
Msa0070750 AT5G13840.2 32.576 132 86 2 351 481 196 325 4.43e-11 65.5
Msa0070750 AT1G15440.1 24.125 257 156 5 228 481 366 586 7.60e-13 71.6
Msa0070750 AT1G15440.1 28.037 214 139 8 111 319 423 626 3.69e-12 69.3
Msa0070750 AT5G08560.1 26.688 311 173 14 160 439 273 559 1.65e-12 70.1
Msa0070750 AT5G08560.2 26.688 311 173 14 160 439 273 559 1.65e-12 70.1
Msa0070750 AT5G08560.3 26.688 311 173 14 160 439 273 559 1.65e-12 70.1
Msa0070750 AT1G49040.3 28.283 198 117 7 114 295 838 1026 2.04e-12 70.1
Msa0070750 AT2G26490.1 24.855 346 208 12 122 441 99 418 2.06e-12 69.7
Msa0070750 AT4G33260.2 26.950 282 165 12 140 394 149 416 2.43e-12 69.3
Msa0070750 AT4G33260.2 25.455 275 172 12 230 478 149 416 3.00e-11 65.9
Msa0070750 AT3G44530.1 30.178 169 91 4 340 481 26 194 4.53e-12 69.3
Msa0070750 AT3G44530.1 22.895 380 226 15 115 446 9 369 9.41e-12 68.2
Msa0070750 AT3G44530.2 30.178 169 91 4 340 481 26 194 4.60e-12 69.3
Msa0070750 AT3G44530.2 22.895 380 226 15 115 446 9 369 9.73e-12 68.2
Msa0070750 AT5G64730.1 19.820 333 206 10 159 481 16 297 4.67e-12 67.4
Msa0070750 AT3G18860.2 27.155 232 148 9 222 439 32 256 8.84e-12 68.2
Msa0070750 AT3G18860.2 29.775 178 109 6 114 291 108 269 5.71e-11 65.5
Msa0070750 AT3G18860.1 27.155 232 148 9 222 439 32 256 9.90e-12 67.8
Msa0070750 AT3G18860.1 29.775 178 109 6 114 291 108 269 6.07e-11 65.5
Msa0070750 AT3G21540.1 33.962 106 70 0 376 481 546 651 1.04e-11 68.2
Msa0070750 AT3G21540.1 31.405 121 79 2 363 481 99 217 7.72e-11 65.1
Msa0070750 AT2G33340.2 24.503 302 183 10 101 397 246 507 1.36e-11 67.0
Msa0070750 AT2G33340.1 24.503 302 183 10 101 397 246 507 1.36e-11 67.0
Msa0070750 AT4G11920.1 25.092 271 166 10 235 481 192 449 1.72e-11 66.6
Msa0070750 AT4G21130.1 32.174 115 77 1 367 481 203 316 1.78e-11 66.6
Msa0070750 AT5G64630.2 31.538 130 77 3 113 236 58 181 2.05e-11 66.6
Msa0070750 AT1G47610.1 29.167 216 129 7 249 441 134 348 2.68e-11 65.5
Msa0070750 AT3G50390.1 26.250 240 149 8 99 317 190 422 2.85e-11 65.9
Msa0070750 AT2G05720.1 28.205 156 87 4 353 483 89 244 3.12e-11 64.3
Msa0070750 AT5G64630.1 31.538 130 77 3 113 236 58 181 3.34e-11 65.5
Msa0070750 AT5G27570.1 25.830 271 173 13 235 481 155 421 3.51e-11 65.5
Msa0070750 AT3G18060.1 35.455 110 63 3 337 441 155 261 3.84e-11 65.9
Msa0070750 AT5G27945.1 25.185 270 175 11 235 481 134 399 6.02e-11 64.7
Msa0070750 AT2G33340.3 25.481 208 139 5 101 303 246 442 7.19e-11 64.7

Find 166 sgRNAs with CRISPR-Local

Find 502 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATGTTCTGCGACAATTTC+TGG 0.090248 1_2:-41491110 Msa0070750:intron
GAAACTAAGCGAAAATTATT+TGG 0.133515 1_2:+41492398 None:intergenic
GTGATACCACTGTTCGATTT+TGG 0.162837 1_2:-41490824 Msa0070750:CDS
TTGTTCAATTCTACGATTCT+AGG 0.170512 1_2:+41492355 None:intergenic
TTGCAGTAACATGTGTAAAA+TGG 0.208421 1_2:-41488888 Msa0070750:CDS
ATGAGGAGGAAGAGGAATTA+GGG 0.253581 1_2:+41492481 None:intergenic
GATCCAGAGACCAATCTTTC+AGG 0.258373 1_2:+41486143 None:intergenic
CCACGGAAGGGAAGCTAATT+CGG 0.260975 1_2:-41488313 Msa0070750:CDS
ATGACCTGTCATGCGAGTTT+TGG 0.262059 1_2:+41486073 None:intergenic
AATGAGGAGGAAGAGGAATT+AGG 0.272113 1_2:+41492480 None:intergenic
AAACTAAGCGAAAATTATTT+GGG 0.272272 1_2:+41492399 None:intergenic
GGAGATGGTGTGATTTATAC+TGG 0.294268 1_2:-41488862 Msa0070750:CDS
AAGATGGGGATGCTCGTATA+TGG 0.296338 1_2:-41488954 Msa0070750:CDS
TTTATGCAGGGCACAAGAAC+TGG 0.307818 1_2:-41489972 Msa0070750:intron
TTAGAGTGACTGTGTGTATA+TGG 0.307917 1_2:+41492424 None:intergenic
GACTCATGTTAAACCTTATC+TGG 0.308094 1_2:+41485535 None:intergenic
CCTAATTGCTTTCCAGTTTG+TGG 0.309104 1_2:+41489871 None:intergenic
ATGATTTCACAATGTTCCTT+TGG 0.315344 1_2:-41486118 Msa0070750:CDS
TTGATAAATCTGTGAAGATA+TGG 0.321081 1_2:-41485614 Msa0070750:CDS
GTTACCTTCTTCATTTCATC+TGG 0.337050 1_2:+41487504 None:intergenic
AGGACTGTACAATCAAAGTT+TGG 0.337784 1_2:-41488340 Msa0070750:CDS
GGTATTATTGATAGTAGTTA+TGG 0.341365 1_2:-41484709 Msa0070750:three_prime_UTR
CTAATTGCTTTCCAGTTTGT+GGG 0.342023 1_2:+41489872 None:intergenic
TTGTTTCTTAAGGACAACTA+TGG 0.342085 1_2:-41484684 Msa0070750:three_prime_UTR
ATATTTAAAATTTGAATGTA+AGG 0.343964 1_2:-41484552 None:intergenic
AAAGTTGAAGCAAGACCTTC+CGG 0.352796 1_2:-41485195 Msa0070750:CDS
TCTAAGCAACTTGTTCTTCC+AGG 0.354958 1_2:+41484830 None:intergenic
CGGCAGCTAGCAAGTGGTTC+TGG 0.356103 1_2:-41490846 Msa0070750:CDS
AGTTATGGTATTGTTTCTTA+AGG 0.362122 1_2:-41484694 Msa0070750:three_prime_UTR
CTCGCTATCCATTGCCCGTC+AGG 0.362273 1_2:+41485645 None:intergenic
AATTGTAGGGCCACAAGAAA+TGG 0.365716 1_2:-41489044 Msa0070750:intron
TTAAACCTTATCTGGTAAAC+AGG 0.366253 1_2:+41485543 None:intergenic
TTTGGGGTGCTTGTTGATGA+AGG 0.371878 1_2:+41486091 None:intergenic
CTGCCTTCCGTGGTCATGTT+GGG 0.380577 1_2:-41485566 Msa0070750:CDS
CTTGCTAGCTGCCGCCCATC+AGG 0.387642 1_2:+41490855 None:intergenic
GGCCACAAGAAATGGATTAC+TGG 0.396022 1_2:-41489036 Msa0070750:CDS
TGATTTCACAATGTTCCTTT+GGG 0.398841 1_2:-41486117 Msa0070750:CDS
CTTGTTAGTGGGAGCATGTC+AGG 0.400778 1_2:-41489913 Msa0070750:CDS
ACGAGCATCCCCATCTTTGC+TGG 0.404255 1_2:+41488960 None:intergenic
TTTGTAAGTGCCAGCAAAGA+TGG 0.406740 1_2:-41488970 Msa0070750:CDS
AATGCAATGGTAACAGCATA+TGG 0.416849 1_2:+41484929 None:intergenic
TAGAGTGACTGTGTGTATAT+GGG 0.421435 1_2:+41492425 None:intergenic
AATGGATTACTGGTATCTCT+TGG 0.424253 1_2:-41489026 Msa0070750:CDS
TGCAGTAACATGTGTAAAAT+GGG 0.431346 1_2:-41488887 Msa0070750:CDS
CCACAAACTGGAAAGCAATT+AGG 0.434125 1_2:-41489871 Msa0070750:CDS
ATATGTTGGGACCCACAAAC+TGG 0.434611 1_2:-41489883 Msa0070750:CDS
AGTTGCTTAGATTGAGTCTC+AGG 0.434716 1_2:-41484818 Msa0070750:three_prime_UTR
AAGATATGGAATGGCACTAC+AGG 0.439810 1_2:-41485600 Msa0070750:CDS
TTGGGCCTGTTTACCAGATA+AGG 0.439980 1_2:-41485548 Msa0070750:intron
CACGGAAGGGAAGCTAATTC+GGG 0.447321 1_2:-41488312 Msa0070750:CDS
GAAGCTACCTTCTCTCCATC+TGG 0.454990 1_2:+41485045 None:intergenic
ATCGATTCACAGGACGAATC+CGG 0.458255 1_2:+41491129 None:intergenic
GGACTGTACAATCAAAGTTT+GGG 0.462447 1_2:-41488339 Msa0070750:CDS
ATAGCCATTGAGATTAGGCC+TGG 0.463221 1_2:-41484848 Msa0070750:three_prime_UTR
AAACTTTGATTGTACAGTCC+TGG 0.466024 1_2:+41488342 None:intergenic
GTCAGGAGAACTTATATGTT+GGG 0.474109 1_2:-41489896 Msa0070750:CDS
CACCGATAGGACCACCATCT+TGG 0.476662 1_2:+41492236 None:intergenic
TACCATTGCATTGAAATCAA+TGG 0.476817 1_2:-41484918 Msa0070750:three_prime_UTR
GAAGGTAGCTTCTGGTGGTA+AGG 0.477510 1_2:-41485034 Msa0070750:CDS
AGGTACTGCCCCTGAAAGAT+TGG 0.483457 1_2:-41486153 Msa0070750:CDS
AGTGACAGAGGCGGCAGTAA+TGG 0.486314 1_2:-41492305 Msa0070750:CDS
AACTTTGATTGTACAGTCCT+GGG 0.486690 1_2:+41488343 None:intergenic
CTAACAAGATACTTGCCATC+TGG 0.488855 1_2:+41489928 None:intergenic
GCCCCTGAAAGATTGGTCTC+TGG 0.490107 1_2:-41486146 Msa0070750:CDS
GATGGAGAGAAGGTAGCTTC+TGG 0.490774 1_2:-41485042 Msa0070750:CDS
CCGAATTAGCTTCCCTTCCG+TGG 0.491843 1_2:+41488313 None:intergenic
CTCAATGGCTATGTAGTATG+TGG 0.492256 1_2:+41484859 None:intergenic
TTGTAAGTGCCAGCAAAGAT+GGG 0.492317 1_2:-41488969 Msa0070750:CDS
GCTTGAGGTTGACAAACTAT+AGG 0.493760 1_2:+41491158 None:intergenic
CTGCCGCCCATCAGGACTAA+AGG 0.494058 1_2:+41490863 None:intergenic
ATGGATTACTGGTATCTCTT+GGG 0.494706 1_2:-41489025 Msa0070750:CDS
ACTACATAGCCATTGAGATT+AGG 0.501458 1_2:-41484853 Msa0070750:three_prime_UTR
ATAGCATATATTCTCAATGA+TGG 0.501989 1_2:+41484969 None:intergenic
ACTGCCTTCCGTGGTCATGT+TGG 0.502272 1_2:-41485567 Msa0070750:CDS
AAGCTGCTTGAATTGCTTGA+GGG 0.504131 1_2:-41484790 Msa0070750:three_prime_UTR
TCTTCCAGGCCTAATCTCAA+TGG 0.506484 1_2:+41484844 None:intergenic
CACCCCAAAACTCGCATGAC+AGG 0.507186 1_2:-41486077 Msa0070750:CDS
TAGTAGTGTCAGTCTTTGAA+TGG 0.507953 1_2:-41484584 Msa0070750:three_prime_UTR
TATTTCAGTCTCGGTGGAGA+AGG 0.510570 1_2:-41491186 Msa0070750:intron
AGTGTTGCCTTTAGTCCTGA+TGG 0.511641 1_2:-41490870 Msa0070750:CDS
CTCCTCATTTCACGAAGCAC+AGG 0.515157 1_2:-41492466 Msa0070750:five_prime_UTR
AAGTTGAAGCAAGACCTTCC+GGG 0.515431 1_2:-41485194 Msa0070750:CDS
GACTGACACTACTAGTATCA+AGG 0.515469 1_2:+41484593 None:intergenic
TGTCAGGAGAACTTATATGT+TGG 0.516400 1_2:-41489897 Msa0070750:CDS
AGATGGGGATGCTCGTATAT+GGG 0.517465 1_2:-41488953 Msa0070750:CDS
GACGGCAAGGAGCATTCAAA+TGG 0.517790 1_2:+41488995 None:intergenic
AGCCATTGATTTCAATGCAA+TGG 0.522076 1_2:+41484916 None:intergenic
GATGGCAAGTATCTTGTTAG+TGG 0.522848 1_2:-41489925 Msa0070750:CDS
TGTTGTTTGTTACAGGTCCC+AGG 0.525353 1_2:-41488360 Msa0070750:intron
ATCCAGAGACCAATCTTTCA+GGG 0.525581 1_2:+41486144 None:intergenic
CAAGGAGCATTCAAATGGAC+AGG 0.535892 1_2:+41489000 None:intergenic
CCCAGTATGATCAAAAGCTC+CGG 0.536410 1_2:+41487542 None:intergenic
GTCCTGTGCTTCGTGAAATG+AGG 0.540395 1_2:+41492464 None:intergenic
TGTGTAAAATGGGGTGGAGA+TGG 0.545822 1_2:-41488877 Msa0070750:CDS
CTTCATCAGCATGGCCCGGA+AGG 0.545921 1_2:+41485180 None:intergenic
ATCTCCAGATGAAATGAAGA+AGG 0.546334 1_2:-41487508 Msa0070750:intron
AGGATAAAGTGTTGAAGTTG+TGG 0.547049 1_2:-41485014 Msa0070750:CDS
ACTGGGTACTTTGTATTGCA+TGG 0.552743 1_2:-41489954 Msa0070750:CDS
TAAAGTGTTGAAGTTGTGGA+TGG 0.553608 1_2:-41485010 Msa0070750:CDS
TGTGTATATGGGGTTTATTG+AGG 0.553939 1_2:+41492436 None:intergenic
TTCGTGAAATGAGGAGGAAG+AGG 0.554475 1_2:+41492473 None:intergenic
TGCAAGGGCTAGCCATAAGA+TGG 0.559528 1_2:-41484626 Msa0070750:three_prime_UTR
TTGGGGTGCTTGTTGATGAA+GGG 0.559855 1_2:+41486092 None:intergenic
GTATGTAGGTCGCTCTTGAA+AGG 0.560150 1_2:-41486190 Msa0070750:intron
TCTGTTGATTGGAGTCCAGA+TGG 0.560782 1_2:-41485060 Msa0070750:CDS
TTGGAGTCCAGATGGAGAGA+AGG 0.560878 1_2:-41485052 Msa0070750:CDS
GTCGCAGAACATCGATTCAC+AGG 0.563941 1_2:+41491119 None:intergenic
ATGTACCTTCCTCAGAATGT+TGG 0.565274 1_2:-41492208 Msa0070750:CDS
GTGTTGCCTTTAGTCCTGAT+GGG 0.565420 1_2:-41490869 Msa0070750:CDS
GAAGCTGCTTGAATTGCTTG+AGG 0.566209 1_2:-41484791 Msa0070750:three_prime_UTR
AGGCCCAACATGACCACGGA+AGG 0.566767 1_2:+41485563 None:intergenic
GACAGAGGCGGCAGTAATGG+AGG 0.568178 1_2:-41492302 Msa0070750:CDS
GACCAAGATGGTGGTCCTAT+CGG 0.568379 1_2:-41492238 Msa0070750:CDS
TACCAGTAATCCATTTCTTG+TGG 0.574299 1_2:+41489034 None:intergenic
GTTGAAGTTGTGGATGGGAT+AGG 0.575704 1_2:-41485004 Msa0070750:exon
GCACTTACAAAGCGACGGCA+AGG 0.581816 1_2:+41488982 None:intergenic
ACTGAGTATGTTCTTCGCAC+CGG 0.583588 1_2:-41487561 Msa0070750:CDS
ACGATGAGTTGAAGCTGTTG+AGG 0.585979 1_2:+41492184 None:intergenic
TCGCATGACAGGTCATCAGC+AGG 0.586232 1_2:-41486066 Msa0070750:intron
AATCGTAGAATTGAACAAAG+AGG 0.588178 1_2:-41492350 Msa0070750:five_prime_UTR
TAATGAACTCTGAGTGTGCA+AGG 0.592466 1_2:-41484642 Msa0070750:three_prime_UTR
TGTATTGCATGGTCACCAGA+TGG 0.592466 1_2:-41489943 Msa0070750:CDS
GAAGCTAATTCGGGAACTGA+AGG 0.593043 1_2:-41488303 Msa0070750:intron
AAATTTGTCACTGCCTTCCG+TGG 0.593446 1_2:-41485576 Msa0070750:CDS
TAGCAAAGATTCTACACTCA+AGG 0.593688 1_2:-41485365 Msa0070750:intron
ACACCAATGTACACATGCAC+AGG 0.593814 1_2:-41490786 Msa0070750:intron
TTATGCAGGGCACAAGAACT+GGG 0.594294 1_2:-41489971 Msa0070750:intron
ACATTCTGAGGAAGGTACAT+AGG 0.595121 1_2:+41492211 None:intergenic
TTGAGAATATATGCTATAGT+CGG 0.599428 1_2:-41484963 Msa0070750:three_prime_UTR
AAAGTTTGGGAAACCACGGA+AGG 0.603610 1_2:-41488326 Msa0070750:CDS
GATGGGCGGCAGCTAGCAAG+TGG 0.603763 1_2:-41490852 Msa0070750:CDS
CATACTTCATCAGCATGGCC+CGG 0.604360 1_2:+41485176 None:intergenic
ATGGCAAGTATCTTGTTAGT+GGG 0.604965 1_2:-41489924 Msa0070750:CDS
AACTAAGCGAAAATTATTTG+GGG 0.613628 1_2:+41492400 None:intergenic
CGAATCCGGAAAACAGCTTG+AGG 0.614227 1_2:+41491143 None:intergenic
AGAGTGACTGTGTGTATATG+GGG 0.615261 1_2:+41492426 None:intergenic
GAGATGGTGTGATTTATACT+GGG 0.617212 1_2:-41488861 Msa0070750:intron
AAGAAATGTATTGTACTCTG+TGG 0.623068 1_2:-41488919 Msa0070750:CDS
TGCTGGCACTTACAAAGCGA+CGG 0.624969 1_2:+41488977 None:intergenic
GAGGACCAACATTCTGAGGA+AGG 0.628031 1_2:+41492203 None:intergenic
TGTTGAGGACCAACATTCTG+AGG 0.633961 1_2:+41492199 None:intergenic
AAGTTTGGGAAACCACGGAA+GGG 0.636040 1_2:-41488325 Msa0070750:CDS
AAAGTGTTGAAGTTGTGGAT+GGG 0.636437 1_2:-41485009 Msa0070750:CDS
AGATATGGAATGGCACTACA+GGG 0.637294 1_2:-41485599 Msa0070750:CDS
TAACATTATTTCAGTCTCGG+TGG 0.646536 1_2:-41491192 Msa0070750:intron
AAATCTGTGAAGATATGGAA+TGG 0.651736 1_2:-41485609 Msa0070750:CDS
TGTAAGTGCCAGCAAAGATG+GGG 0.651945 1_2:-41488968 Msa0070750:CDS
AAACCTGTGCATGTGTACAT+TGG 0.651974 1_2:+41490783 None:intergenic
TGTTGATGAAGGGTTCCCAA+AGG 0.656500 1_2:+41486102 None:intergenic
TTGCCTTTAGTCCTGATGGG+CGG 0.657528 1_2:-41490866 Msa0070750:CDS
GTAACATGTGTAAAATGGGG+TGG 0.657634 1_2:-41488883 Msa0070750:CDS
AATGAACTCTGAGTGTGCAA+GGG 0.658014 1_2:-41484641 Msa0070750:three_prime_UTR
GAAAGGTACAACACAACGAG+AGG 0.664486 1_2:-41486173 Msa0070750:CDS
AATCAAAGTTTGGGAAACCA+CGG 0.664975 1_2:-41488330 Msa0070750:CDS
GGAGAGAAGGTAGCTTCTGG+TGG 0.666605 1_2:-41485039 Msa0070750:CDS
TCCAGAGACCAATCTTTCAG+GGG 0.670077 1_2:+41486145 None:intergenic
ATCAATGGCTGACTATTGTG+TGG 0.672413 1_2:-41484903 Msa0070750:three_prime_UTR
ACAAACATACTTCATCAGCA+TGG 0.676482 1_2:+41485171 None:intergenic
GGAGATTGATACAGTGACAG+AGG 0.679214 1_2:-41492317 Msa0070750:CDS
AAACAGGCCCAACATGACCA+CGG 0.685929 1_2:+41485559 None:intergenic
GATTGATACAGTGACAGAGG+CGG 0.687443 1_2:-41492314 Msa0070750:CDS
CTGTGCTTCGTGAAATGAGG+AGG 0.690598 1_2:+41492467 None:intergenic
CACATGTTACTGCAAGTGTG+TGG 0.697887 1_2:+41488896 None:intergenic
AGGTACATAGGAGCACCGAT+AGG 0.699059 1_2:+41492223 None:intergenic
AAGATCCCAAAATCGAACAG+TGG 0.710715 1_2:+41490818 None:intergenic
GCAGTAACATGTGTAAAATG+GGG 0.768702 1_2:-41488886 Msa0070750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGAAATTGATAAATAA+AGG + chr1_2:41489087-41489106 None:intergenic 10.0%
!! AATAAATATATCCATTTATT+AGG - chr1_2:41489107-41489126 Msa0070750:intron 10.0%
!!! ATATTTTGGTATTTATTTTA+GGG - chr1_2:41489416-41489435 Msa0070750:intron 10.0%
!!! ATTTTATATTGATATTACTT+TGG - chr1_2:41490087-41490106 Msa0070750:intron 10.0%
!!! ATTTGAAGAAATAAAAATTT+TGG + chr1_2:41491040-41491059 None:intergenic 10.0%
!!! TAACCATAATTTTTATTTTT+TGG - chr1_2:41491692-41491711 Msa0070750:intron 10.0%
!! TAACCAAAAAATAAAAATTA+TGG + chr1_2:41491698-41491717 None:intergenic 10.0%
!!! TATTTTTTGGTTAATATTTT+TGG - chr1_2:41491705-41491724 Msa0070750:intron 10.0%
!! AAATTTACATTTGAAAATTG+TGG - chr1_2:41485277-41485296 Msa0070750:intron 15.0%
!!! AAGTTATTTTGACATAAATT+AGG + chr1_2:41485504-41485523 None:intergenic 15.0%
!!! AATATGATTTAACATTGATT+TGG - chr1_2:41485608-41485627 Msa0070750:CDS 15.0%
!!! TAATTTTTACTCTTTTTGAA+TGG + chr1_2:41486944-41486963 None:intergenic 15.0%
!!! CAAATATTTTAGAAAACAAT+AGG - chr1_2:41487575-41487594 Msa0070750:CDS 15.0%
!! AGATTAATAATTGAAAAAAG+AGG - chr1_2:41487634-41487653 Msa0070750:intron 15.0%
!! AAATAGAATAAAAGAATATC+AGG - chr1_2:41487773-41487792 Msa0070750:intron 15.0%
!!! ATTTGAAATATACTAATTGT+AGG - chr1_2:41487976-41487995 Msa0070750:intron 15.0%
!!! TTTGAAATATACTAATTGTA+GGG - chr1_2:41487977-41487996 Msa0070750:intron 15.0%
!!! CTTTTTTAATAATACAATAG+TGG - chr1_2:41488606-41488625 Msa0070750:intron 15.0%
!!! TTTTACTATTTAAATTCTCA+AGG - chr1_2:41488821-41488840 Msa0070750:intron 15.0%
!! TTGAGATATCATTTAAAAAT+GGG - chr1_2:41488916-41488935 Msa0070750:CDS 15.0%
!!! ATACTATTGTTTTCATATTT+TGG - chr1_2:41489402-41489421 Msa0070750:intron 15.0%
!!! CATATTTTGGTATTTATTTT+AGG - chr1_2:41489415-41489434 Msa0070750:intron 15.0%
!!! TTTTTGTAGTAAGAAAAATT+CGG - chr1_2:41489744-41489763 Msa0070750:intron 15.0%
!! CTTATAAAAAGTTAAAACAA+TGG - chr1_2:41489901-41489920 Msa0070750:CDS 15.0%
!! GTAATATCAATATAAAATGA+GGG + chr1_2:41490085-41490104 None:intergenic 15.0%
!! AGTAATATCAATATAAAATG+AGG + chr1_2:41490086-41490105 None:intergenic 15.0%
!! TAAAAAATAATAATTGACAG+TGG - chr1_2:41490222-41490241 Msa0070750:intron 15.0%
!! AATCCAAATAAATTTATGTT+GGG + chr1_2:41490287-41490306 None:intergenic 15.0%
!!! CTTTCTTGTTATAAAAATAT+CGG - chr1_2:41490416-41490435 Msa0070750:intron 15.0%
!!! GATTTAATGTTATTTTTAGT+TGG - chr1_2:41490486-41490505 Msa0070750:intron 15.0%
!! AAAGATAGACAAAATAATTA+AGG + chr1_2:41491191-41491210 None:intergenic 15.0%
!!! TTGGTTTGTATAATAATTAT+TGG - chr1_2:41491734-41491753 Msa0070750:intron 15.0%
!! AAACTAAGCGAAAATTATTT+GGG + chr1_2:41484638-41484657 None:intergenic 20.0%
!! ACACAGAAAATAGAAAAAAA+GGG + chr1_2:41484907-41484926 None:intergenic 20.0%
!! AACACAGAAAATAGAAAAAA+AGG + chr1_2:41484908-41484927 None:intergenic 20.0%
!! TTCAGTATAAAAAACATTTG+TGG - chr1_2:41485051-41485070 Msa0070750:CDS 20.0%
!! GTTAATGAAGTTTAAATACA+TGG - chr1_2:41485103-41485122 Msa0070750:intron 20.0%
!!! GTTTGATAATATAATACGTT+TGG - chr1_2:41485421-41485440 Msa0070750:intron 20.0%
!!! TTTAACATTGATTTGGTTAT+CGG - chr1_2:41485615-41485634 Msa0070750:CDS 20.0%
!!! TCTGATATATAAAAAGCATA+CGG + chr1_2:41485675-41485694 None:intergenic 20.0%
!! AATGTTAAATTAACATCACA+AGG + chr1_2:41485829-41485848 None:intergenic 20.0%
!! ATTTAACATTATTTCAGTCT+CGG - chr1_2:41485839-41485858 Msa0070750:intron 20.0%
!!! ATTTTCTTTGGAATTAATGT+CGG - chr1_2:41486106-41486125 Msa0070750:CDS 20.0%
!! ACATATACATTTCTAATAAG+TGG + chr1_2:41486860-41486879 None:intergenic 20.0%
!! TCCATTATTTATTATTCACT+CGG + chr1_2:41487420-41487439 None:intergenic 20.0%
!!! GTGAATAATAAATAATGGAT+TGG - chr1_2:41487421-41487440 Msa0070750:intron 20.0%
!!! TTTTTACAATTTTCAAGTGT+GGG + chr1_2:41487755-41487774 None:intergenic 20.0%
!!! TTTTTTACAATTTTCAAGTG+TGG + chr1_2:41487756-41487775 None:intergenic 20.0%
!!! TATTTTAGATGAACATTGTT+TGG - chr1_2:41487842-41487861 Msa0070750:intron 20.0%
!! ATATTTATAACAACCACTTT+GGG - chr1_2:41487874-41487893 Msa0070750:intron 20.0%
!! TATACCATCTAATTGTTTAT+TGG - chr1_2:41487945-41487964 Msa0070750:intron 20.0%
!! ATATAACATAAAATTCCTTG+AGG + chr1_2:41488761-41488780 None:intergenic 20.0%
!! TAAATGATATCTCAACATAT+TGG + chr1_2:41488911-41488930 None:intergenic 20.0%
!! GTTGAGATATCATTTAAAAA+TGG - chr1_2:41488915-41488934 Msa0070750:CDS 20.0%
!! TAAACAATAGATTATAGATC+AGG + chr1_2:41489140-41489159 None:intergenic 20.0%
!!! TTTTGTAGTAAGAAAAATTC+GGG - chr1_2:41489745-41489764 Msa0070750:intron 20.0%
!! TAAATTAATAATGTGGTTTC+AGG - chr1_2:41490254-41490273 Msa0070750:intron 20.0%
!! AAACCCAACATAAATTTATT+TGG - chr1_2:41490281-41490300 Msa0070750:intron 20.0%
!! CAATCCAAATAAATTTATGT+TGG + chr1_2:41490288-41490307 None:intergenic 20.0%
!! AATTTATTTGGATTGTTGAT+TGG - chr1_2:41490293-41490312 Msa0070750:intron 20.0%
!! CAAGGAAAATATAATCTTAA+CGG + chr1_2:41490621-41490640 None:intergenic 20.0%
!!! TGAAATTATTTTGGACATTT+AGG - chr1_2:41490645-41490664 Msa0070750:intron 20.0%
!!! GAAATTATTTTGGACATTTA+GGG - chr1_2:41490646-41490665 Msa0070750:intron 20.0%
!! AAATTGTGATTTAATCTGTA+TGG + chr1_2:41491261-41491280 None:intergenic 20.0%
!!! TAGTTATGTTTTTATGCATT+AGG - chr1_2:41491290-41491309 Msa0070750:intron 20.0%
!!! TTAGGCAAATTTCATTTTTT+AGG - chr1_2:41491308-41491327 Msa0070750:intron 20.0%
!!! AGTTCTAAGCAAAATATATT+TGG + chr1_2:41491585-41491604 None:intergenic 20.0%
!!! TTTGGTTAATATTTTTGGTT+TGG - chr1_2:41491710-41491729 Msa0070750:intron 20.0%
!!! TTAATATTTTTGGTTTGGTT+TGG - chr1_2:41491715-41491734 Msa0070750:intron 20.0%
!!! TTTTAAAAATCACTCGTATT+TGG + chr1_2:41491897-41491916 None:intergenic 20.0%
!!! TTTTTTCAAGTCTTTTTTTC+TGG - chr1_2:41492304-41492323 Msa0070750:CDS 20.0%
!!! ATGGCAATTTTGTATTTTTT+TGG - chr1_2:41492369-41492388 Msa0070750:five_prime_UTR 20.0%
! AACTAAGCGAAAATTATTTG+GGG + chr1_2:41484637-41484656 None:intergenic 25.0%
! GAAACTAAGCGAAAATTATT+TGG + chr1_2:41484639-41484658 None:intergenic 25.0%
! GATTAACACATTCAAATACA+TGG + chr1_2:41485455-41485474 None:intergenic 25.0%
!!! TAACTTAGCTCTATTGTTAA+AGG - chr1_2:41485518-41485537 Msa0070750:intron 25.0%
! TGTTCTTTCAATCATTGTAA+TGG - chr1_2:41485968-41485987 Msa0070750:intron 25.0%
! ACTTGTAGAATAATTCTACA+CGG + chr1_2:41486003-41486022 None:intergenic 25.0%
! ACATAAAAGTTAAACGTTTG+TGG - chr1_2:41486045-41486064 Msa0070750:intron 25.0%
!!! TGTATTGTTGTCATTTTCTT+TGG - chr1_2:41486094-41486113 Msa0070750:CDS 25.0%
! GAAACTATCAATTGATATGT+AGG - chr1_2:41486341-41486360 Msa0070750:intron 25.0%
! CAACACAAGGAATAATAAAT+TGG - chr1_2:41486534-41486553 Msa0070750:intron 25.0%
! TAGAAACAGATACTTGTTTA+AGG + chr1_2:41486794-41486813 None:intergenic 25.0%
! ACAACTTTACAAAACTGATA+CGG + chr1_2:41486823-41486842 None:intergenic 25.0%
!!! GCATGCTTTTTTTTTTTGAA+TGG + chr1_2:41486994-41487013 None:intergenic 25.0%
! TGCACTCTTATATATCTTTA+AGG - chr1_2:41487011-41487030 Msa0070750:intron 25.0%
!! TATATGTTTGCATTTTATGC+AGG - chr1_2:41487049-41487068 Msa0070750:intron 25.0%
!! ATATGTTTGCATTTTATGCA+GGG - chr1_2:41487050-41487069 Msa0070750:intron 25.0%
! ATAACACAAATCAGAATTCA+AGG + chr1_2:41487214-41487233 None:intergenic 25.0%
!!! CTTTAAAATGCAAAATCATG+AGG + chr1_2:41487256-41487275 None:intergenic 25.0%
! ACCGAGTGAATAATAAATAA+TGG - chr1_2:41487416-41487435 Msa0070750:intron 25.0%
! TTTATTAATTCAGTGTTTCC+TGG - chr1_2:41487797-41487816 Msa0070750:intron 25.0%
! TTATTAATTCAGTGTTTCCT+GGG - chr1_2:41487798-41487817 Msa0070750:intron 25.0%
! CATATTTATAACAACCACTT+TGG - chr1_2:41487873-41487892 Msa0070750:intron 25.0%
! TTGTCCAATAAACAATTAGA+TGG + chr1_2:41487952-41487971 None:intergenic 25.0%
! AAAAATACTGAGAATTTGGA+AGG + chr1_2:41488214-41488233 None:intergenic 25.0%
! TCTAGTATACTTTGATCTTT+AGG - chr1_2:41488419-41488438 Msa0070750:intron 25.0%
!! ATGGGTTAAAATCAGTAAAT+GGG + chr1_2:41488498-41488517 None:intergenic 25.0%
!!! ACTTTTAATTCAACTAATCC+TGG - chr1_2:41488556-41488575 Msa0070750:intron 25.0%
! AGTAGTAATATGGAAACATA+GGG + chr1_2:41488640-41488659 None:intergenic 25.0%
! AAGTAGTAATATGGAAACAT+AGG + chr1_2:41488641-41488660 None:intergenic 25.0%
! TATGTTTCCATATTACTACT+TGG - chr1_2:41488640-41488659 Msa0070750:intron 25.0%
! ATGTTTCCATATTACTACTT+GGG - chr1_2:41488641-41488660 Msa0070750:intron 25.0%
!! AAATTCTCAAGGATTTTACT+AGG - chr1_2:41488832-41488851 Msa0070750:intron 25.0%
! TAAATGGTATCTCAACATAT+TGG + chr1_2:41489192-41489211 None:intergenic 25.0%
!! CAGGAAAGTAACTTTTTAAA+TGG + chr1_2:41489208-41489227 None:intergenic 25.0%
!! CATTTAAAAAGTTACTTTCC+TGG - chr1_2:41489206-41489225 Msa0070750:intron 25.0%
! TGATACAAAGTAAGTATTAG+TGG + chr1_2:41489289-41489308 None:intergenic 25.0%
! TCATTAAATTCCAGATATGT+GGG + chr1_2:41489651-41489670 None:intergenic 25.0%
! TTTGTAGTAAGAAAAATTCG+GGG - chr1_2:41489746-41489765 Msa0070750:intron 25.0%
! CAATTGCAATTCAATATCAT+AGG + chr1_2:41489973-41489992 None:intergenic 25.0%
!! TGCATTGTTCTTAGATTTTA+TGG - chr1_2:41490576-41490595 Msa0070750:intron 25.0%
! GAAAATATAATCTTAACGGA+GGG + chr1_2:41490617-41490636 None:intergenic 25.0%
! AATGTCCAAAATAATTTCAG+AGG + chr1_2:41490644-41490663 None:intergenic 25.0%
!!! TCTGATTTATTTTCTCCTTT+TGG - chr1_2:41490680-41490699 Msa0070750:intron 25.0%
!!! AAATTTTGGTTTGTTCTCAT+TGG + chr1_2:41491026-41491045 None:intergenic 25.0%
! TCAGTATTTAGTAGAAAACT+AGG - chr1_2:41491083-41491102 Msa0070750:intron 25.0%
! TGCACATAAAATGGTTAAAT+AGG - chr1_2:41491141-41491160 Msa0070750:CDS 25.0%
! TTGATAAATCTGTGAAGATA+TGG - chr1_2:41491420-41491439 Msa0070750:intron 25.0%
!! AATGTAATTTTCCATTCTTG+TGG - chr1_2:41491915-41491934 Msa0070750:intron 25.0%
!!! AGTTTATTTTATTGCTCTGT+AGG - chr1_2:41491946-41491965 Msa0070750:intron 25.0%
! ATAGCATATATTCTCAATGA+TGG + chr1_2:41492068-41492087 None:intergenic 25.0%
! TTGAGAATATATGCTATAGT+CGG - chr1_2:41492071-41492090 Msa0070750:intron 25.0%
!! GGTATTATTGATAGTAGTTA+TGG - chr1_2:41492325-41492344 Msa0070750:exon 25.0%
!! AGTTATGGTATTGTTTCTTA+AGG - chr1_2:41492340-41492359 Msa0070750:exon 25.0%
TTGTTCAATTCTACGATTCT+AGG + chr1_2:41484682-41484701 None:intergenic 30.0%
AATCGTAGAATTGAACAAAG+AGG - chr1_2:41484684-41484703 Msa0070750:three_prime_UTR 30.0%
ATATTATCAAACATCAGCCA+TGG + chr1_2:41485413-41485432 None:intergenic 30.0%
!! TGCTTTTTATATATCAGACG+AGG - chr1_2:41485677-41485696 Msa0070750:intron 30.0%
TGTTTAGCAGACATGAAAAA+TGG + chr1_2:41486296-41486315 None:intergenic 30.0%
TTCTGATAGATGCCTATTAT+CGG - chr1_2:41486475-41486494 Msa0070750:intron 30.0%
GAAGAAATGAAATCATGAGA+GGG - chr1_2:41486634-41486653 Msa0070750:intron 30.0%
AAGAAATGAAATCATGAGAG+GGG - chr1_2:41486635-41486654 Msa0070750:intron 30.0%
!!! TCTGTTTTGAAGATTTACAG+AGG - chr1_2:41486738-41486757 Msa0070750:intron 30.0%
TCTGACAGTATATCCTTAAT+TGG + chr1_2:41487293-41487312 None:intergenic 30.0%
TATATTGTCAGTATAGTCGA+TGG - chr1_2:41487322-41487341 Msa0070750:intron 30.0%
! ATCGATTGCAACTGAAATTT+TGG - chr1_2:41487377-41487396 Msa0070750:intron 30.0%
! CATAACATATGTATTTTCCC+AGG + chr1_2:41487818-41487837 None:intergenic 30.0%
CTGGGAAAATACATATGTTA+TGG - chr1_2:41487816-41487835 Msa0070750:intron 30.0%
GGTTGTTATAAATATGTACG+TGG + chr1_2:41487869-41487888 None:intergenic 30.0%
AAGAAATGTATTGTACTCTG+TGG - chr1_2:41488115-41488134 Msa0070750:intron 30.0%
TTGCAGTAACATGTGTAAAA+TGG - chr1_2:41488146-41488165 Msa0070750:intron 30.0%
TGCAGTAACATGTGTAAAAT+GGG - chr1_2:41488147-41488166 Msa0070750:intron 30.0%
CGACAAAAATACTGAGAATT+TGG + chr1_2:41488218-41488237 None:intergenic 30.0%
! CATGGGTTAAAATCAGTAAA+TGG + chr1_2:41488499-41488518 None:intergenic 30.0%
CTCTAAACTAGGATAAACAT+GGG + chr1_2:41488516-41488535 None:intergenic 30.0%
TCTCTAAACTAGGATAAACA+TGG + chr1_2:41488517-41488536 None:intergenic 30.0%
AGATCTGTAATCTCTAAACT+AGG + chr1_2:41488527-41488546 None:intergenic 30.0%
CAAAAACCCAAGTAGTAATA+TGG + chr1_2:41488650-41488669 None:intergenic 30.0%
! TTGACTATGTTGTTTGTTAC+AGG - chr1_2:41488667-41488686 Msa0070750:intron 30.0%
! TCATTTAAAAATGGGTTTCC+TGG - chr1_2:41488924-41488943 Msa0070750:CDS 30.0%
! AAGAGTTTGTTTATCATACC+AGG + chr1_2:41488945-41488964 None:intergenic 30.0%
!!! TTTTGTTGTTCATGTGTACA+AGG - chr1_2:41488963-41488982 Msa0070750:CDS 30.0%
!! TTTGTTGTTCATGTGTACAA+GGG - chr1_2:41488964-41488983 Msa0070750:CDS 30.0%
CAACCTAATACCTAATAAGA+TGG - chr1_2:41489055-41489074 Msa0070750:intron 30.0%
CTTCCATCTTATTAGGTATT+AGG + chr1_2:41489061-41489080 None:intergenic 30.0%
CTAATACCTAATAAGATGGA+AGG - chr1_2:41489059-41489078 Msa0070750:intron 30.0%
CAGGTTAAACACCTAATAAA+TGG + chr1_2:41489121-41489140 None:intergenic 30.0%
TAGATATTGATCATCATACC+AGG + chr1_2:41489227-41489246 None:intergenic 30.0%
GATGACATCACTAATAAAAC+AGG + chr1_2:41489348-41489367 None:intergenic 30.0%
!!! TGGTATTTATTTTAGGGACA+TGG - chr1_2:41489422-41489441 Msa0070750:intron 30.0%
!!! GGTATTTATTTTAGGGACAT+GGG - chr1_2:41489423-41489442 Msa0070750:intron 30.0%
GTCATTAAATTCCAGATATG+TGG + chr1_2:41489652-41489671 None:intergenic 30.0%
!! GTCTTGCTGATTCAAATATT+AGG + chr1_2:41489951-41489970 None:intergenic 30.0%
ACATACTACACTTCAAAAAC+TGG + chr1_2:41490061-41490080 None:intergenic 30.0%
! TATCATAATGTCTTTTGCTC+AGG - chr1_2:41490191-41490210 Msa0070750:intron 30.0%
!! AACACATTGATTCAATACAC+TGG + chr1_2:41490320-41490339 None:intergenic 30.0%
ATTATAAGGAGTTGGATACA+TGG + chr1_2:41490387-41490406 None:intergenic 30.0%
TGTATCCAACTCCTTATAAT+AGG - chr1_2:41490387-41490406 Msa0070750:intron 30.0%
CAACTCCTTATAATAGGATT+CGG - chr1_2:41490393-41490412 Msa0070750:intron 30.0%
GGAAAATATAATCTTAACGG+AGG + chr1_2:41490618-41490637 None:intergenic 30.0%
ATGCACAATAAACAACCAAA+AGG + chr1_2:41490698-41490717 None:intergenic 30.0%
TGGTATTAGTAAAACAGAGA+TGG + chr1_2:41490809-41490828 None:intergenic 30.0%
ATGATTTCACAATGTTCCTT+TGG - chr1_2:41490916-41490935 Msa0070750:intron 30.0%
TGATTTCACAATGTTCCTTT+GGG - chr1_2:41490917-41490936 Msa0070750:intron 30.0%
TCATTGGCATATTGTGAAAT+TGG + chr1_2:41491010-41491029 None:intergenic 30.0%
AGTTTGTGTTGCACATAAAA+TGG - chr1_2:41491132-41491151 Msa0070750:CDS 30.0%
AAATCTGTGAAGATATGGAA+TGG - chr1_2:41491425-41491444 Msa0070750:intron 30.0%
TTAAACCTTATCTGGTAAAC+AGG + chr1_2:41491494-41491513 None:intergenic 30.0%
! GATAGTAGACTTCTTTTAAG+TGG - chr1_2:41491646-41491665 Msa0070750:intron 30.0%
TGAAAATCAAACACACTGAA+AGG + chr1_2:41491797-41491816 None:intergenic 30.0%
!! TTCAGTGTGTTTGATTTTCA+AGG - chr1_2:41491797-41491816 Msa0070750:intron 30.0%
!! TGTGTTTGATTTTCAAGGTT+TGG - chr1_2:41491802-41491821 Msa0070750:intron 30.0%
!! GTGTTTGATTTTCAAGGTTT+GGG - chr1_2:41491803-41491822 Msa0070750:intron 30.0%
!! TTTTCAAGGTTTGGGATATT+CGG - chr1_2:41491811-41491830 Msa0070750:intron 30.0%
! CTGATGAAGTATGTTTGTTA+GGG - chr1_2:41491868-41491887 Msa0070750:intron 30.0%
TACCATTGCATTGAAATCAA+TGG - chr1_2:41492116-41492135 Msa0070750:intron 30.0%
! TTGTTTCTTAAGGACAACTA+TGG - chr1_2:41492350-41492369 Msa0070750:five_prime_UTR 30.0%
TGTGTATATGGGGTTTATTG+AGG + chr1_2:41484601-41484620 None:intergenic 35.0%
TAGAGTGACTGTGTGTATAT+GGG + chr1_2:41484612-41484631 None:intergenic 35.0%
TTAGAGTGACTGTGTGTATA+TGG + chr1_2:41484613-41484632 None:intergenic 35.0%
GAACAAAGAGGAACGAAAAA+TGG - chr1_2:41484696-41484715 Msa0070750:three_prime_UTR 35.0%
! TCGTCTGTTATTCATTTTCG+TGG - chr1_2:41484930-41484949 Msa0070750:three_prime_UTR 35.0%
! CGTCTGTTATTCATTTTCGT+GGG - chr1_2:41484931-41484950 Msa0070750:three_prime_UTR 35.0%
!! TCATCGGATTAGTCTATTCT+TGG - chr1_2:41484980-41484999 Msa0070750:three_prime_UTR 35.0%
!! CATCGGATTAGTCTATTCTT+GGG - chr1_2:41484981-41485000 Msa0070750:three_prime_UTR 35.0%
AAAACTGACCCAAGTAAACT+CGG + chr1_2:41485014-41485033 None:intergenic 35.0%
CACAGCTCAATAATCATTCA+CGG - chr1_2:41485168-41485187 Msa0070750:intron 35.0%
TCTGTCTGTTGTCTCAATTT+AGG - chr1_2:41485638-41485657 Msa0070750:CDS 35.0%
! TTTTGCAGGTATGTTTCAAG+TGG + chr1_2:41485714-41485733 None:intergenic 35.0%
ACATACCTGCAAAAACACAA+AGG - chr1_2:41485720-41485739 Msa0070750:intron 35.0%
!! ACTAACCTTTGTGTTTTTGC+AGG + chr1_2:41485728-41485747 None:intergenic 35.0%
CAAAGGTTAGTAGTCATGTT+TGG - chr1_2:41485737-41485756 Msa0070750:intron 35.0%
TAACATTATTTCAGTCTCGG+TGG - chr1_2:41485842-41485861 Msa0070750:intron 35.0%
! TGATACCACTGTTCGATTTT+GGG - chr1_2:41486211-41486230 Msa0070750:intron 35.0%
TCTGATAGATGCCTATTATC+GGG - chr1_2:41486476-41486495 Msa0070750:intron 35.0%
GTTATTCAAACTGTTGAGTG+TGG - chr1_2:41486556-41486575 Msa0070750:intron 35.0%
GGAAGAAATGAAATCATGAG+AGG - chr1_2:41486633-41486652 Msa0070750:intron 35.0%
AGAAATGAAATCATGAGAGG+GGG - chr1_2:41486636-41486655 Msa0070750:intron 35.0%
CAATTTCTGAGCGAGTATAT+GGG - chr1_2:41486683-41486702 Msa0070750:intron 35.0%
AATAAAGCTCCTAAAACCAG+AGG + chr1_2:41486768-41486787 None:intergenic 35.0%
TAAAGTTGTTCCTTGATACG+AGG - chr1_2:41486834-41486853 Msa0070750:intron 35.0%
ATGGCAAGTATCTTGTTAGT+GGG - chr1_2:41487110-41487129 Msa0070750:intron 35.0%
TGTCAGGAGAACTTATATGT+TGG - chr1_2:41487137-41487156 Msa0070750:intron 35.0%
GTCAGGAGAACTTATATGTT+GGG - chr1_2:41487138-41487157 Msa0070750:intron 35.0%
CTAATTGCTTTCCAGTTTGT+GGG + chr1_2:41487165-41487184 None:intergenic 35.0%
! GATTGCAACTGAAATTTTGG+AGG - chr1_2:41487380-41487399 Msa0070750:intron 35.0%
!!! TACAATTTTCAAGTGTGGGA+GGG + chr1_2:41487751-41487770 None:intergenic 35.0%
!!! TTACAATTTTCAAGTGTGGG+AGG + chr1_2:41487752-41487771 None:intergenic 35.0%
TACCAGTAATCCATTTCTTG+TGG + chr1_2:41488003-41488022 None:intergenic 35.0%
!! AATGGATTACTGGTATCTCT+TGG - chr1_2:41488008-41488027 Msa0070750:intron 35.0%
! ATGGATTACTGGTATCTCTT+GGG - chr1_2:41488009-41488028 Msa0070750:intron 35.0%
GCAGTAACATGTGTAAAATG+GGG - chr1_2:41488148-41488167 Msa0070750:intron 35.0%
GAGATGGTGTGATTTATACT+GGG - chr1_2:41488173-41488192 Msa0070750:intron 35.0%
ATACTGAGAATTTGGAAGGA+AGG + chr1_2:41488210-41488229 None:intergenic 35.0%
ATTCAACTAATCCTGGTGTT+TGG - chr1_2:41488563-41488582 Msa0070750:intron 35.0%
AACTTTGATTGTACAGTCCT+GGG + chr1_2:41488694-41488713 None:intergenic 35.0%
AAACTTTGATTGTACAGTCC+TGG + chr1_2:41488695-41488714 None:intergenic 35.0%
AGGACTGTACAATCAAAGTT+TGG - chr1_2:41488694-41488713 Msa0070750:intron 35.0%
GGACTGTACAATCAAAGTTT+GGG - chr1_2:41488695-41488714 Msa0070750:intron 35.0%
AATCAAAGTTTGGGAAACCA+CGG - chr1_2:41488704-41488723 Msa0070750:intron 35.0%
AAGGTTCCTTCCATCTTATT+AGG + chr1_2:41489068-41489087 None:intergenic 35.0%
ATCTCCAGATGAAATGAAGA+AGG - chr1_2:41489526-41489545 Msa0070750:intron 35.0%
GTTACCTTCTTCATTTCATC+TGG + chr1_2:41489533-41489552 None:intergenic 35.0%
CCTAACAACTACTGTTCAAA+GGG + chr1_2:41489583-41489602 None:intergenic 35.0%
ACCTAACAACTACTGTTCAA+AGG + chr1_2:41489584-41489603 None:intergenic 35.0%
GTAGTTGTTAGGTACAAAAC+CGG - chr1_2:41489591-41489610 Msa0070750:intron 35.0%
TAGTTGTTAGGTACAAAACC+GGG - chr1_2:41489592-41489611 Msa0070750:intron 35.0%
CAATAATTAGCCCACATATC+TGG - chr1_2:41489638-41489657 Msa0070750:intron 35.0%
! CTGCATTAGTTTCAACATAC+AGG - chr1_2:41489718-41489737 Msa0070750:intron 35.0%
AATTTAGCTGTAGTGCTAAC+AGG - chr1_2:41489790-41489809 Msa0070750:intron 35.0%
ATTAATCTGTCTGCTAGATC+AGG + chr1_2:41490038-41490057 None:intergenic 35.0%
CGAATCCTATTATAAGGAGT+TGG + chr1_2:41490395-41490414 None:intergenic 35.0%
GAAAGCCGAATCCTATTATA+AGG + chr1_2:41490401-41490420 None:intergenic 35.0%
TCTGCTTTATACCTTCCTAA+CGG - chr1_2:41490534-41490553 Msa0070750:intron 35.0%
CCAAAATAATTTCAGAGGCA+AGG + chr1_2:41490639-41490658 None:intergenic 35.0%
!!! CCTTGCCTCTGAAATTATTT+TGG - chr1_2:41490636-41490655 Msa0070750:intron 35.0%
ATGGAAGTAGTTCCTACATA+AGG + chr1_2:41490790-41490809 None:intergenic 35.0%
TTTATGCTGCTGATGTATGT+AGG - chr1_2:41490830-41490849 Msa0070750:CDS 35.0%
GACTCATGTTAAACCTTATC+TGG + chr1_2:41491502-41491521 None:intergenic 35.0%
!! TTGGCTAGCATTTGATTTGT+GGG + chr1_2:41491566-41491585 None:intergenic 35.0%
!! TTTGGCTAGCATTTGATTTG+TGG + chr1_2:41491567-41491586 None:intergenic 35.0%
TAGCAAAGATTCTACACTCA+AGG - chr1_2:41491669-41491688 Msa0070750:intron 35.0%
ACAAACATACTTCATCAGCA+TGG + chr1_2:41491866-41491885 None:intergenic 35.0%
GCTGATGAAGTATGTTTGTT+AGG - chr1_2:41491867-41491886 Msa0070750:intron 35.0%
! TGTAGGTGTTTTCTGTTGAT+TGG - chr1_2:41491963-41491982 Msa0070750:intron 35.0%
!! AGGATAAAGTGTTGAAGTTG+TGG - chr1_2:41492020-41492039 Msa0070750:intron 35.0%
!! TAAAGTGTTGAAGTTGTGGA+TGG - chr1_2:41492024-41492043 Msa0070750:intron 35.0%
!! AAAGTGTTGAAGTTGTGGAT+GGG - chr1_2:41492025-41492044 Msa0070750:intron 35.0%
AATGCAATGGTAACAGCATA+TGG + chr1_2:41492108-41492127 None:intergenic 35.0%
!! AGCCATTGATTTCAATGCAA+TGG + chr1_2:41492121-41492140 None:intergenic 35.0%
ACTACATAGCCATTGAGATT+AGG - chr1_2:41492181-41492200 Msa0070750:CDS 35.0%
GGCAAACAAAAACCATCTTA+TGG + chr1_2:41492423-41492442 None:intergenic 35.0%
TAGTAGTGTCAGTCTTTGAA+TGG - chr1_2:41492450-41492469 Msa0070750:five_prime_UTR 35.0%
ATGAGGAGGAAGAGGAATTA+GGG + chr1_2:41484556-41484575 None:intergenic 40.0%
AATGAGGAGGAAGAGGAATT+AGG + chr1_2:41484557-41484576 None:intergenic 40.0%
AGAGTGACTGTGTGTATATG+GGG + chr1_2:41484611-41484630 None:intergenic 40.0%
! TGTCTTTTGACAGACCAAGA+TGG - chr1_2:41484784-41484803 Msa0070750:three_prime_UTR 40.0%
! ACATTCTGAGGAAGGTACAT+AGG + chr1_2:41484826-41484845 None:intergenic 40.0%
ATGTACCTTCCTCAGAATGT+TGG - chr1_2:41484826-41484845 Msa0070750:three_prime_UTR 40.0%
!! GGATTAGTCTATTCTTGGGT+CGG - chr1_2:41484985-41485004 Msa0070750:three_prime_UTR 40.0%
! GTTCAGTTCAGTGTTGTTGA+TGG - chr1_2:41485304-41485323 Msa0070750:intron 40.0%
GCCACCATCTTTCACAAAAT+TGG - chr1_2:41485339-41485358 Msa0070750:intron 40.0%
! GCCAATTTTGTGAAAGATGG+TGG + chr1_2:41485343-41485362 None:intergenic 40.0%
! GTGGCCAATTTTGTGAAAGA+TGG + chr1_2:41485346-41485365 None:intergenic 40.0%
!!! GGTTTTTTGGGTTTTCGATG+TGG + chr1_2:41485365-41485384 None:intergenic 40.0%
AAAACCCAAAAAACCACCAC+TGG - chr1_2:41485370-41485389 Msa0070750:CDS 40.0%
!!! GATACCAGTGGTGGTTTTTT+GGG + chr1_2:41485377-41485396 None:intergenic 40.0%
!!! AGATACCAGTGGTGGTTTTT+TGG + chr1_2:41485378-41485397 None:intergenic 40.0%
TTATCAAACATCAGCCATGG+TGG + chr1_2:41485410-41485429 None:intergenic 40.0%
GTCTGTTGTCTCAATTTAGG+AGG - chr1_2:41485641-41485660 Msa0070750:CDS 40.0%
GCTTGAGGTTGACAAACTAT+AGG + chr1_2:41485879-41485898 None:intergenic 40.0%
! GTGATACCACTGTTCGATTT+TGG - chr1_2:41486210-41486229 Msa0070750:intron 40.0%
AAGATCCCAAAATCGAACAG+TGG + chr1_2:41486219-41486238 None:intergenic 40.0%
!!! ACTGTTCGATTTTGGGATCT+TGG - chr1_2:41486218-41486237 Msa0070750:intron 40.0%
AAACCTGTGCATGTGTACAT+TGG + chr1_2:41486254-41486273 None:intergenic 40.0%
CTGATAGATGCCTATTATCG+GGG - chr1_2:41486477-41486496 Msa0070750:intron 40.0%
TGATAGATGCCTATTATCGG+GGG - chr1_2:41486478-41486497 Msa0070750:intron 40.0%
CATAACATACCCCCGATAAT+AGG + chr1_2:41486490-41486509 None:intergenic 40.0%
! ATTATCGGGGGTATGTTATG+AGG - chr1_2:41486490-41486509 Msa0070750:intron 40.0%
GAAATGAAATCATGAGAGGG+GGG - chr1_2:41486637-41486656 Msa0070750:intron 40.0%
GCAATTTCTGAGCGAGTATA+TGG - chr1_2:41486682-41486701 Msa0070750:intron 40.0%
GATTTACAGAGGTTTACCTC+TGG - chr1_2:41486749-41486768 Msa0070750:intron 40.0%
!!! AGAGGTTTACCTCTGGTTTT+AGG - chr1_2:41486756-41486775 Msa0070750:intron 40.0%
TAATAAGTGGCCTCGTATCA+AGG + chr1_2:41486847-41486866 None:intergenic 40.0%
! AAAGAGTGCATGCTAACAAC+TGG + chr1_2:41486919-41486938 None:intergenic 40.0%
ACTGGGTACTTTGTATTGCA+TGG - chr1_2:41487080-41487099 Msa0070750:intron 40.0%
CTAACAAGATACTTGCCATC+TGG + chr1_2:41487109-41487128 None:intergenic 40.0%
GATGGCAAGTATCTTGTTAG+TGG - chr1_2:41487109-41487128 Msa0070750:intron 40.0%
CCTAATTGCTTTCCAGTTTG+TGG + chr1_2:41487166-41487185 None:intergenic 40.0%
CCACAAACTGGAAAGCAATT+AGG - chr1_2:41487163-41487182 Msa0070750:intron 40.0%
ATTGTCAGTATAGTCGATGG+TGG - chr1_2:41487325-41487344 Msa0070750:intron 40.0%
!! TGCAACTGAAATTTTGGAGG+AGG - chr1_2:41487383-41487402 Msa0070750:intron 40.0%
!! ACATTGATTCTGACCCAAAG+TGG + chr1_2:41487890-41487909 None:intergenic 40.0%
AATTGTAGGGCCACAAGAAA+TGG - chr1_2:41487990-41488009 Msa0070750:intron 40.0%
TTTGTAAGTGCCAGCAAAGA+TGG - chr1_2:41488064-41488083 Msa0070750:intron 40.0%
TTGTAAGTGCCAGCAAAGAT+GGG - chr1_2:41488065-41488084 Msa0070750:intron 40.0%
GTAACATGTGTAAAATGGGG+TGG - chr1_2:41488151-41488170 Msa0070750:intron 40.0%
GGAGATGGTGTGATTTATAC+TGG - chr1_2:41488172-41488191 Msa0070750:intron 40.0%
! GAGTTTTTACTTCCCACAGA+GGG + chr1_2:41488462-41488481 None:intergenic 40.0%
! TGAGTTTTTACTTCCCACAG+AGG + chr1_2:41488463-41488482 None:intergenic 40.0%
! GTGTTTGGTGATAGTATGCA+GGG - chr1_2:41488578-41488597 Msa0070750:intron 40.0%
! TGTTTGGTGATAGTATGCAG+GGG - chr1_2:41488579-41488598 Msa0070750:intron 40.0%
!! TATTTTAGGGACATGGGCAT+TGG - chr1_2:41489429-41489448 Msa0070750:intron 40.0%
!! ATTTTAGGGACATGGGCATT+GGG - chr1_2:41489430-41489449 Msa0070750:intron 40.0%
CCCTTTGAACAGTAGTTGTT+AGG - chr1_2:41489580-41489599 Msa0070750:intron 40.0%
TAATTATTGCTGATCTGGCC+AGG + chr1_2:41489627-41489646 None:intergenic 40.0%
TGGGCTAATTATTGCTGATC+TGG + chr1_2:41489632-41489651 None:intergenic 40.0%
AAGAAAAATTCGGGGATCGA+AGG - chr1_2:41489754-41489773 Msa0070750:intron 40.0%
ATTGATAAAGCCCAGTGACA+TGG - chr1_2:41490355-41490374 Msa0070750:intron 40.0%
TCTAAGAACAATGCATGCCA+TGG + chr1_2:41490571-41490590 None:intergenic 40.0%
CATACATCAGCAGCATAAAC+TGG + chr1_2:41490829-41490848 None:intergenic 40.0%
ATCCAGAGACCAATCTTTCA+GGG + chr1_2:41490893-41490912 None:intergenic 40.0%
!! CATGTCTATTTTTCGCCTGA+CGG - chr1_2:41491374-41491393 Msa0070750:CDS 40.0%
!! ATGTCTATTTTTCGCCTGAC+GGG - chr1_2:41491375-41491394 Msa0070750:CDS 40.0%
AAGATATGGAATGGCACTAC+AGG - chr1_2:41491434-41491453 Msa0070750:intron 40.0%
AGATATGGAATGGCACTACA+GGG - chr1_2:41491435-41491454 Msa0070750:intron 40.0%
!! GTTGACTTTTTCTCTACAGC+TGG - chr1_2:41491617-41491636 Msa0070750:intron 40.0%
AAAGTTGAAGCAAGACCTTC+CGG - chr1_2:41491839-41491858 Msa0070750:intron 40.0%
ATCAATGGCTGACTATTGTG+TGG - chr1_2:41492131-41492150 Msa0070750:intron 40.0%
CTCAATGGCTATGTAGTATG+TGG + chr1_2:41492178-41492197 None:intergenic 40.0%
! TCTAAGCAACTTGTTCTTCC+AGG + chr1_2:41492207-41492226 None:intergenic 40.0%
AGTTGCTTAGATTGAGTCTC+AGG - chr1_2:41492216-41492235 Msa0070750:CDS 40.0%
AAGCTGCTTGAATTGCTTGA+GGG - chr1_2:41492244-41492263 Msa0070750:CDS 40.0%
TAATGAACTCTGAGTGTGCA+AGG - chr1_2:41492392-41492411 Msa0070750:five_prime_UTR 40.0%
AATGAACTCTGAGTGTGCAA+GGG - chr1_2:41492393-41492412 Msa0070750:five_prime_UTR 40.0%
GACTGACACTACTAGTATCA+AGG + chr1_2:41492444-41492463 None:intergenic 40.0%
TTCGTGAAATGAGGAGGAAG+AGG + chr1_2:41484564-41484583 None:intergenic 45.0%
GGAGATTGATACAGTGACAG+AGG - chr1_2:41484717-41484736 Msa0070750:three_prime_UTR 45.0%
GATTGATACAGTGACAGAGG+CGG - chr1_2:41484720-41484739 Msa0070750:three_prime_UTR 45.0%
! CTTTTGACAGACCAAGATGG+TGG - chr1_2:41484787-41484806 Msa0070750:three_prime_UTR 45.0%
TGTTGAGGACCAACATTCTG+AGG + chr1_2:41484838-41484857 None:intergenic 45.0%
! ACGATGAGTTGAAGCTGTTG+AGG + chr1_2:41484853-41484872 None:intergenic 45.0%
! GGACGGTAGAATTGGTTCAT+CGG - chr1_2:41484964-41484983 Msa0070750:three_prime_UTR 45.0%
GTCGGATACCGAGTTTACTT+GGG - chr1_2:41485003-41485022 Msa0070750:exon 45.0%
AACATTGCAGATACCAGTGG+TGG + chr1_2:41485386-41485405 None:intergenic 45.0%
TATCTGCAATGTTGCCACCA+TGG - chr1_2:41485393-41485412 Msa0070750:CDS 45.0%
TATTTCAGTCTCGGTGGAGA+AGG - chr1_2:41485848-41485867 Msa0070750:intron 45.0%
!! GTCAACCTCAAGCTGTTTTC+CGG - chr1_2:41485886-41485905 Msa0070750:intron 45.0%
! ATCGATTCACAGGACGAATC+CGG + chr1_2:41485908-41485927 None:intergenic 45.0%
CGATGTTCTGCGACAATTTC+TGG - chr1_2:41485924-41485943 Msa0070750:intron 45.0%
!! CTTTGGAATTAATGTCGGCG+AGG - chr1_2:41486111-41486130 Msa0070750:CDS 45.0%
ATGTCGGCGAGGTTATTTGT+AGG - chr1_2:41486122-41486141 Msa0070750:CDS 45.0%
GCGAGGTTATTTGTAGGTCA+TGG - chr1_2:41486128-41486147 Msa0070750:CDS 45.0%
AGTGTTGCCTTTAGTCCTGA+TGG - chr1_2:41486164-41486183 Msa0070750:CDS 45.0%
GTGTTGCCTTTAGTCCTGAT+GGG - chr1_2:41486165-41486184 Msa0070750:CDS 45.0%
ACACCAATGTACACATGCAC+AGG - chr1_2:41486248-41486267 Msa0070750:intron 45.0%
! GGGGGTATGTTATGAGGAAA+GGG - chr1_2:41486496-41486515 Msa0070750:intron 45.0%
GGGGTATGTTATGAGGAAAG+GGG - chr1_2:41486497-41486516 Msa0070750:intron 45.0%
GTATGTTATGAGGAAAGGGG+TGG - chr1_2:41486500-41486519 Msa0070750:intron 45.0%
GGAAGTAGAGGATCAACACA+AGG - chr1_2:41486521-41486540 Msa0070750:intron 45.0%
AGCATAACTGTATGCTGAGC+TGG - chr1_2:41486579-41486598 Msa0070750:intron 45.0%
TGGGAGGTGGAAATTACGTT+AGG - chr1_2:41486612-41486631 Msa0070750:intron 45.0%
! AAGGACTAGAAGTGTGACAC+AGG - chr1_2:41486660-41486679 Msa0070750:intron 45.0%
TTTCTGAGCGAGTATATGGG+AGG - chr1_2:41486686-41486705 Msa0070750:intron 45.0%
TTCTGAGCGAGTATATGGGA+GGG - chr1_2:41486687-41486706 Msa0070750:intron 45.0%
TTTATGCAGGGCACAAGAAC+TGG - chr1_2:41487062-41487081 Msa0070750:intron 45.0%
TTATGCAGGGCACAAGAACT+GGG - chr1_2:41487063-41487082 Msa0070750:intron 45.0%
TGTATTGCATGGTCACCAGA+TGG - chr1_2:41487091-41487110 Msa0070750:intron 45.0%
ATATGTTGGGACCCACAAAC+TGG - chr1_2:41487151-41487170 Msa0070750:intron 45.0%
GCGTTGAGAACAGCCAATTA+AGG - chr1_2:41487277-41487296 Msa0070750:intron 45.0%
TCTCTGCACGTGATTCTTCA+AGG + chr1_2:41487617-41487636 None:intergenic 45.0%
AGCAACAGAACATTGGTGCA+GGG - chr1_2:41487659-41487678 Msa0070750:intron 45.0%
!! GGCCACAAGAAATGGATTAC+TGG - chr1_2:41487998-41488017 Msa0070750:intron 45.0%
!! CAAGGAGCATTCAAATGGAC+AGG + chr1_2:41488037-41488056 None:intergenic 45.0%
TGTAAGTGCCAGCAAAGATG+GGG - chr1_2:41488066-41488085 Msa0070750:intron 45.0%
AAGATGGGGATGCTCGTATA+TGG - chr1_2:41488080-41488099 Msa0070750:intron 45.0%
AGATGGGGATGCTCGTATAT+GGG - chr1_2:41488081-41488100 Msa0070750:intron 45.0%
CACATGTTACTGCAAGTGTG+TGG + chr1_2:41488141-41488160 None:intergenic 45.0%
TGTGTAAAATGGGGTGGAGA+TGG - chr1_2:41488157-41488176 Msa0070750:intron 45.0%
TTATTCCTGCATACCCTCTG+TGG - chr1_2:41488446-41488465 Msa0070750:intron 45.0%
TATTCCTGCATACCCTCTGT+GGG - chr1_2:41488447-41488466 Msa0070750:intron 45.0%
GCATACTATCACCAAACACC+AGG + chr1_2:41488577-41488596 None:intergenic 45.0%
! GGTGTTTGGTGATAGTATGC+AGG - chr1_2:41488577-41488596 Msa0070750:intron 45.0%
! TGTTGTTTGTTACAGGTCCC+AGG - chr1_2:41488674-41488693 Msa0070750:intron 45.0%
AAAGTTTGGGAAACCACGGA+AGG - chr1_2:41488708-41488727 Msa0070750:intron 45.0%
AAGTTTGGGAAACCACGGAA+GGG - chr1_2:41488709-41488728 Msa0070750:intron 45.0%
GAAGCTAATTCGGGAACTGA+AGG - chr1_2:41488731-41488750 Msa0070750:intron 45.0%
CTAATTCGGGAACTGAAGGT+AGG - chr1_2:41488735-41488754 Msa0070750:intron 45.0%
GTTGTTCATGTGTACAAGGG+TGG - chr1_2:41488967-41488986 Msa0070750:CDS 45.0%
TTCATGTGTACAAGGGTGGA+TGG - chr1_2:41488971-41488990 Msa0070750:CDS 45.0%
! GGTGGATGGTAGTGTGAAAA+AGG - chr1_2:41488985-41489004 Msa0070750:CDS 45.0%
ACTGAGTATGTTCTTCGCAC+CGG - chr1_2:41489473-41489492 Msa0070750:intron 45.0%
! ACCGGAGCTTTTGATCATAC+TGG - chr1_2:41489491-41489510 Msa0070750:intron 45.0%
CCCAGTATGATCAAAAGCTC+CGG + chr1_2:41489495-41489514 None:intergenic 45.0%
! CCGGAGCTTTTGATCATACT+GGG - chr1_2:41489492-41489511 Msa0070750:intron 45.0%
! TTGAGCTGGTTTCAGTCACA+AGG + chr1_2:41489695-41489714 None:intergenic 45.0%
TTGTGACTGAAACCAGCTCA+AGG - chr1_2:41489694-41489713 Msa0070750:intron 45.0%
AACTAATGCAGTCCTTGAGC+TGG + chr1_2:41489709-41489728 None:intergenic 45.0%
GGGATCGAAGGACTTCATAA+TGG - chr1_2:41489766-41489785 Msa0070750:intron 45.0%
ATGGACAGAACCATGTCACT+GGG + chr1_2:41490368-41490387 None:intergenic 45.0%
GCTTTATACCTTCCTAACGG+TGG - chr1_2:41490537-41490556 Msa0070750:intron 45.0%
GCTTCGCAAGTTCCTTATGT+AGG - chr1_2:41490775-41490794 Msa0070750:intron 45.0%
GTATGTAGGTCGCTCTTGAA+AGG - chr1_2:41490844-41490863 Msa0070750:CDS 45.0%
! GAAAGGTACAACACAACGAG+AGG - chr1_2:41490861-41490880 Msa0070750:CDS 45.0%
TCCAGAGACCAATCTTTCAG+GGG + chr1_2:41490892-41490911 None:intergenic 45.0%
GATCCAGAGACCAATCTTTC+AGG + chr1_2:41490894-41490913 None:intergenic 45.0%
! TGTTGATGAAGGGTTCCCAA+AGG + chr1_2:41490935-41490954 None:intergenic 45.0%
! TTGGGGTGCTTGTTGATGAA+GGG + chr1_2:41490945-41490964 None:intergenic 45.0%
! TTTGGGGTGCTTGTTGATGA+AGG + chr1_2:41490946-41490965 None:intergenic 45.0%
! TGACCTGTCATGCGAGTTTT+GGG + chr1_2:41490963-41490982 None:intergenic 45.0%
! ATGACCTGTCATGCGAGTTT+TGG + chr1_2:41490964-41490983 None:intergenic 45.0%
CGTCAGGCGAAAAATAGACA+TGG + chr1_2:41491376-41491395 None:intergenic 45.0%
AAATTTGTCACTGCCTTCCG+TGG - chr1_2:41491458-41491477 Msa0070750:intron 45.0%
TTGGGCCTGTTTACCAGATA+AGG - chr1_2:41491486-41491505 Msa0070750:intron 45.0%
AAGTTGAAGCAAGACCTTCC+GGG - chr1_2:41491840-41491859 Msa0070750:intron 45.0%
ACTCTAGTCAGCCACAAGAA+TGG + chr1_2:41491929-41491948 None:intergenic 45.0%
! TCTGTTGATTGGAGTCCAGA+TGG - chr1_2:41491974-41491993 Msa0070750:intron 45.0%
GTTGAAGTTGTGGATGGGAT+AGG - chr1_2:41492030-41492049 Msa0070750:intron 45.0%
!!! GGATGGGATAGGCTACTTTT+TGG - chr1_2:41492041-41492060 Msa0070750:intron 45.0%
ATAGCCATTGAGATTAGGCC+TGG - chr1_2:41492186-41492205 Msa0070750:CDS 45.0%
TCTTCCAGGCCTAATCTCAA+TGG + chr1_2:41492193-41492212 None:intergenic 45.0%
GAAGCTGCTTGAATTGCTTG+AGG - chr1_2:41492243-41492262 Msa0070750:CDS 45.0%
!!! TTTTAATTAAATTAATAATG+TGG - chr1_2:41490247-41490266 Msa0070750:intron 5.0%
CTGTGCTTCGTGAAATGAGG+AGG + chr1_2:41484570-41484589 None:intergenic 50.0%
CTCCTCATTTCACGAAGCAC+AGG - chr1_2:41484568-41484587 Msa0070750:three_prime_UTR 50.0%
GTCCTGTGCTTCGTGAAATG+AGG + chr1_2:41484573-41484592 None:intergenic 50.0%
! GACCAAGATGGTGGTCCTAT+CGG - chr1_2:41484796-41484815 Msa0070750:three_prime_UTR 50.0%
!! AGGTACATAGGAGCACCGAT+AGG + chr1_2:41484814-41484833 None:intergenic 50.0%
! GAGGACCAACATTCTGAGGA+AGG + chr1_2:41484834-41484853 None:intergenic 50.0%
AATTCTACCGTCCACTAGCG+AGG + chr1_2:41484957-41484976 None:intergenic 50.0%
! TCGCTAGTGGACGGTAGAAT+TGG - chr1_2:41484956-41484975 Msa0070750:three_prime_UTR 50.0%
GGTCGGATACCGAGTTTACT+TGG - chr1_2:41485002-41485021 Msa0070750:exon 50.0%
!! TGTTGTTGATGGCCGACATC+TGG - chr1_2:41485315-41485334 Msa0070750:intron 50.0%
GGCAACATTGCAGATACCAG+TGG + chr1_2:41485389-41485408 None:intergenic 50.0%
CGAATCCGGAAAACAGCTTG+AGG + chr1_2:41485894-41485913 None:intergenic 50.0%
!! GTCGCAGAACATCGATTCAC+AGG + chr1_2:41485918-41485937 None:intergenic 50.0%
TTGCCTTTAGTCCTGATGGG+CGG - chr1_2:41486168-41486187 Msa0070750:CDS 50.0%
! CGGGGGTATGTTATGAGGAA+AGG - chr1_2:41486495-41486514 Msa0070750:intron 50.0%
AACTGTATGCTGAGCTGGCA+AGG - chr1_2:41486584-41486603 Msa0070750:intron 50.0%
CTGAGCTGGCAAGGAAAAGT+GGG - chr1_2:41486593-41486612 Msa0070750:intron 50.0%
TGAAATCATGAGAGGGGGGA+AGG - chr1_2:41486641-41486660 Msa0070750:intron 50.0%
! CTTGTTAGTGGGAGCATGTC+AGG - chr1_2:41487121-41487140 Msa0070750:intron 50.0%
AGAGGCGAGCAACAGAACAT+TGG - chr1_2:41487652-41487671 Msa0070750:intron 50.0%
GAGCAACAGAACATTGGTGC+AGG - chr1_2:41487658-41487677 Msa0070750:intron 50.0%
GCAACAGAACATTGGTGCAG+GGG - chr1_2:41487660-41487679 Msa0070750:intron 50.0%
!! GACGGCAAGGAGCATTCAAA+TGG + chr1_2:41488042-41488061 None:intergenic 50.0%
TGCTGGCACTTACAAAGCGA+CGG + chr1_2:41488060-41488079 None:intergenic 50.0%
CCACGGAAGGGAAGCTAATT+CGG - chr1_2:41488721-41488740 Msa0070750:intron 50.0%
CACGGAAGGGAAGCTAATTC+GGG - chr1_2:41488722-41488741 Msa0070750:intron 50.0%
GTATCAGCGTAGCTGCTAAC+TGG - chr1_2:41488796-41488815 Msa0070750:intron 50.0%
CATGGACAGAACCATGTCAC+TGG + chr1_2:41490369-41490388 None:intergenic 50.0%
TACCTTCCTAACGGTGGAAG+TGG - chr1_2:41490543-41490562 Msa0070750:intron 50.0%
TTCCACTTCCACCGTTAGGA+AGG + chr1_2:41490548-41490567 None:intergenic 50.0%
ATGGTTCCACTTCCACCGTT+AGG + chr1_2:41490552-41490571 None:intergenic 50.0%
TAACGGTGGAAGTGGAACCA+TGG - chr1_2:41490551-41490570 Msa0070750:intron 50.0%
! AGGTACTGCCCCTGAAAGAT+TGG - chr1_2:41490881-41490900 Msa0070750:CDS 50.0%
! GACCTGTCATGCGAGTTTTG+GGG + chr1_2:41490962-41490981 None:intergenic 50.0%
!! ATTTTTCGCCTGACGGGCAA+TGG - chr1_2:41491381-41491400 Msa0070750:intron 50.0%
AAACAGGCCCAACATGACCA+CGG + chr1_2:41491478-41491497 None:intergenic 50.0%
CATACTTCATCAGCATGGCC+CGG + chr1_2:41491861-41491880 None:intergenic 50.0%
TTGGAGTCCAGATGGAGAGA+AGG - chr1_2:41491982-41492001 Msa0070750:intron 50.0%
GAAGCTACCTTCTCTCCATC+TGG + chr1_2:41491992-41492011 None:intergenic 50.0%
GATGGAGAGAAGGTAGCTTC+TGG - chr1_2:41491992-41492011 Msa0070750:intron 50.0%
GAAGGTAGCTTCTGGTGGTA+AGG - chr1_2:41492000-41492019 Msa0070750:intron 50.0%
!! TGCAAGGGCTAGCCATAAGA+TGG - chr1_2:41492408-41492427 Msa0070750:five_prime_UTR 50.0%
AGTGACAGAGGCGGCAGTAA+TGG - chr1_2:41484729-41484748 Msa0070750:three_prime_UTR 55.0%
CACCGATAGGACCACCATCT+TGG + chr1_2:41484801-41484820 None:intergenic 55.0%
! ATTTTCGTGGGCCTCGCTAG+TGG - chr1_2:41484943-41484962 Msa0070750:three_prime_UTR 55.0%
! AAGATGGTGGCGCCAGATGT+CGG + chr1_2:41485330-41485349 None:intergenic 55.0%
CGTTTGATTGTGCCCACGCA+CGG - chr1_2:41486403-41486422 Msa0070750:intron 55.0%
CTAGCAATGCAACCGTGCGT+GGG + chr1_2:41486418-41486437 None:intergenic 55.0%
TCTAGCAATGCAACCGTGCG+TGG + chr1_2:41486419-41486438 None:intergenic 55.0%
GAGGAAAGGGGTGGAAGTAG+AGG - chr1_2:41486509-41486528 Msa0070750:intron 55.0%
GCTGAGCTGGCAAGGAAAAG+TGG - chr1_2:41486592-41486611 Msa0070750:intron 55.0%
AGCTGGCAAGGAAAAGTGGG+AGG - chr1_2:41486596-41486615 Msa0070750:intron 55.0%
TGGCAAGGAAAAGTGGGAGG+TGG - chr1_2:41486599-41486618 Msa0070750:intron 55.0%
TGAGCGAGTATATGGGAGGG+AGG - chr1_2:41486690-41486709 Msa0070750:intron 55.0%
ACAGAACATTGGTGCAGGGG+TGG - chr1_2:41487663-41487682 Msa0070750:intron 55.0%
GCACTTACAAAGCGACGGCA+AGG + chr1_2:41488055-41488074 None:intergenic 55.0%
ACGAGCATCCCCATCTTTGC+TGG + chr1_2:41488077-41488096 None:intergenic 55.0%
! ACTTCCCACAGAGGGTATGC+AGG + chr1_2:41488454-41488473 None:intergenic 55.0%
! CCGAATTAGCTTCCCTTCCG+TGG + chr1_2:41488724-41488743 None:intergenic 55.0%
GGAACTGAAGGTAGGCCTCA+AGG - chr1_2:41488743-41488762 Msa0070750:intron 55.0%
!! GCCCCTGAAAGATTGGTCTC+TGG - chr1_2:41490888-41490907 Msa0070750:CDS 55.0%
CACCCCAAAACTCGCATGAC+AGG - chr1_2:41490957-41490976 Msa0070750:intron 55.0%
TCGCATGACAGGTCATCAGC+AGG - chr1_2:41490968-41490987 Msa0070750:intron 55.0%
ACTGCCTTCCGTGGTCATGT+TGG - chr1_2:41491467-41491486 Msa0070750:intron 55.0%
CTGCCTTCCGTGGTCATGTT+GGG - chr1_2:41491468-41491487 Msa0070750:intron 55.0%
GGAGAGAAGGTAGCTTCTGG+TGG - chr1_2:41491995-41492014 Msa0070750:intron 55.0%
GACAGAGGCGGCAGTAATGG+AGG - chr1_2:41484732-41484751 Msa0070750:three_prime_UTR 60.0%
CTGCCGCCCATCAGGACTAA+AGG + chr1_2:41486174-41486193 None:intergenic 60.0%
CGGCAGCTAGCAAGTGGTTC+TGG - chr1_2:41486188-41486207 Msa0070750:intron 60.0%
AAAACCGGGCCTTCTCTGCC+TGG - chr1_2:41489606-41489625 Msa0070750:intron 60.0%
CTGATCTGGCCAGGCAGAGA+AGG + chr1_2:41489618-41489637 None:intergenic 60.0%
CTCGCTATCCATTGCCCGTC+AGG + chr1_2:41491392-41491411 None:intergenic 60.0%
AGGCCCAACATGACCACGGA+AGG + chr1_2:41491474-41491493 None:intergenic 60.0%
CTTCATCAGCATGGCCCGGA+AGG + chr1_2:41491857-41491876 None:intergenic 60.0%
TCGTGGGCCTCGCTAGTGGA+CGG - chr1_2:41484947-41484966 Msa0070750:three_prime_UTR 65.0%
CTTGCTAGCTGCCGCCCATC+AGG + chr1_2:41486182-41486201 None:intergenic 65.0%
GATGGGCGGCAGCTAGCAAG+TGG - chr1_2:41486182-41486201 Msa0070750:CDS 65.0%
CTGGCCAGGCAGAGAAGGCC+CGG + chr1_2:41489613-41489632 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 41484553 41492503 41484553 ID=Msa0070750;Name=Msa0070750
chr1_2 mRNA 41484553 41492503 41484553 ID=Msa0070750-mRNA-1;Parent=Msa0070750;Name=Msa0070750-mRNA-1;_AED=0.09;_eAED=0.09;_QI=162|1|1|1|1|1|13|452|483
chr1_2 exon 41484553 41485088 41484553 ID=Msa0070750-mRNA-1:exon:12724;Parent=Msa0070750-mRNA-1
chr1_2 exon 41485181 41485237 41485181 ID=Msa0070750-mRNA-1:exon:12723;Parent=Msa0070750-mRNA-1
chr1_2 exon 41485366 41485420 41485366 ID=Msa0070750-mRNA-1:exon:12722;Parent=Msa0070750-mRNA-1
chr1_2 exon 41485549 41485691 41485549 ID=Msa0070750-mRNA-1:exon:12721;Parent=Msa0070750-mRNA-1
chr1_2 exon 41486067 41486204 41486067 ID=Msa0070750-mRNA-1:exon:12720;Parent=Msa0070750-mRNA-1
chr1_2 exon 41487509 41487619 41487509 ID=Msa0070750-mRNA-1:exon:12719;Parent=Msa0070750-mRNA-1
chr1_2 exon 41488304 41488367 41488304 ID=Msa0070750-mRNA-1:exon:12718;Parent=Msa0070750-mRNA-1
chr1_2 exon 41488862 41489058 41488862 ID=Msa0070750-mRNA-1:exon:12717;Parent=Msa0070750-mRNA-1
chr1_2 exon 41489858 41489985 41489858 ID=Msa0070750-mRNA-1:exon:12716;Parent=Msa0070750-mRNA-1
chr1_2 exon 41490787 41490912 41490787 ID=Msa0070750-mRNA-1:exon:12715;Parent=Msa0070750-mRNA-1
chr1_2 exon 41491111 41491200 41491111 ID=Msa0070750-mRNA-1:exon:12714;Parent=Msa0070750-mRNA-1
chr1_2 exon 41491315 41491396 41491315 ID=Msa0070750-mRNA-1:exon:12713;Parent=Msa0070750-mRNA-1
chr1_2 exon 41492165 41492503 41492165 ID=Msa0070750-mRNA-1:exon:12712;Parent=Msa0070750-mRNA-1
chr1_2 five_prime_UTR 41492342 41492503 41492342 ID=Msa0070750-mRNA-1:five_prime_utr;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41492165 41492341 41492165 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41491315 41491396 41491315 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41491111 41491200 41491111 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41490787 41490912 41490787 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41489858 41489985 41489858 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41488862 41489058 41488862 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41488304 41488367 41488304 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41487509 41487619 41487509 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41486067 41486204 41486067 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41485549 41485691 41485549 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41485366 41485420 41485366 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41485181 41485237 41485181 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 CDS 41485005 41485088 41485005 ID=Msa0070750-mRNA-1:cds;Parent=Msa0070750-mRNA-1
chr1_2 three_prime_UTR 41484553 41485004 41484553 ID=Msa0070750-mRNA-1:three_prime_utr;Parent=Msa0070750-mRNA-1
Gene Sequence

>Msa0070750

ATGGAGATTGATACAGTGACAGAGGCGGCAGTAATGGAGGAGAAGAGAACGACAGTAAACAACGTGATGTGTCTTTTGACAGACCAAGATGGTGGTCCTATCGGTGCTCCTATGTACCTTCCTCAGAATGTTGGTCCTCAACAGCTTCAACTCATCGTTAATCAGCTTCTGAACAATGAGGAGAAATTGCCGTATGCTTTTTATATATCAGACGAGGAGCTTCTTGTACCACTTGAAACATACCTGCAAAAACACAAAGTCTCGGTGGAGAAGGCATTGCCTATAGTTTGTCAACCTCAAGCTGTTTTCCGGATTCGTCCTGTGAATCGATGTTCTGCGACAATTTCTGGTCATGGTGAAGCTGTATTGAGTGTTGCCTTTAGTCCTGATGGGCGGCAGCTAGCAAGTGGTTCTGGTGATACCACTGTTCGATTTTGGGATCTTGGCACTCAGACACCAATGTACACATGCACAGGGCACAAGAACTGGGTACTTTGTATTGCATGGTCACCAGATGGCAAGTATCTTGTTAGTGGGAGCATGTCAGGAGAACTTATATGTTGGGACCCACAAACTGGAAAGCAATTAGGCAATGCTCTAACTGGCCACAAGAAATGGATTACTGGTATCTCTTGGGAACCTGTCCATTTGAATGCTCCTTGCCGTCGCTTTGTAAGTGCCAGCAAAGATGGGGATGCTCGTATATGGGATGTTTCTTTAAAGAAATGTATTGTACTCTGTGGCCACACACTTGCAGTAACATGTGTAAAATGGGGTGGAGATGGTGTGATTTATACTGGGTCCCAGGACTGTACAATCAAAGTTTGGGAAACCACGGAAGGGAAGCTAATTCGGGAACTGAAGGGACATGGGCATTGGGTTAATTCTTTAGCATTGAGCACTGAGTATGTTCTTCGCACCGGAGCTTTTGATCATACTGGGAAACAGTATTCATCTCCAGATGAAATGAAGAAGGTCGCTCTTGAAAGGTACAACACAACGAGAGGTACTGCCCCTGAAAGATTGGTCTCTGGATCTGATGATTTCACAATGTTCCTTTGGGAACCCTTCATCAACAAGCACCCCAAAACTCGCATGACAGGTCATCAGCAGCTTGTGAACCATGTCTATTTTTCGCCTGACGGGCAATGGATAGCGAGCGCATCTTTTGATAAATCTGTGAAGATATGGAATGGCACTACAGGGAAATTTGTCACTGCCTTCCGTGGTCATGTTGGGCCTGTTTACCAGATAAGCTGGTCTGCTGATAGTAGACTTCTTTTAAGTGGTAGCAAAGATTCTACACTCAAGGTTTGGGATATTCGGACTCGAAAGTTGAAGCAAGACCTTCCGGGCCATGCTGATGAAGTGTTTTCTGTTGATTGGAGTCCAGATGGAGAGAAGGTAGCTTCTGGTGGTAAGGATAAAGTGTTGAAGTTGTGGATGGGATAG
Protein sequence

>Msa0070750

MEIDTVTEAAVMEEKRTTVNNVMCLLTDQDGGPIGAPMYLPQNVGPQQLQLIVNQLLNNEEKLPYAFYISDEELLVPLETYLQKHKVSVEKALPIVCQPQAVFRIRPVNRCSATISGHGEAVLSVAFSPDGRQLASGSGDTTVRFWDLGTQTPMYTCTGHKNWVLCIAWSPDGKYLVSGSMSGELICWDPQTGKQLGNALTGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLKKCIVLCGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTEGKLIRELKGHGHWVNSLALSTEYVLRTGAFDHTGKQYSSPDEMKKVALERYNTTRGTAPERLVSGSDDFTMFLWEPFINKHPKTRMTGHQQLVNHVYFSPDGQWIASASFDKSVKIWNGTTGKFVTAFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTRKLKQDLPGHADEVFSVDWSPDGEKVASGGKDKVLKLWMG*