AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0118690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0118690 MtrunA17_Chr1g0176241 100.000 483 0 0 1 483 1 483 0.0 1001
Msa0118690 MtrunA17_Chr1g0172771 77.647 85 18 1 289 372 21 105 3.92e-39 138
Msa0118690 MtrunA17_Chr1g0185501 29.940 334 185 8 156 482 22 313 5.48e-37 138
Msa0118690 MtrunA17_Chr1g0185501 30.164 305 186 8 110 397 18 312 3.63e-27 111
Msa0118690 MtrunA17_Chr1g0185501 36.719 128 78 2 354 481 14 138 1.53e-20 92.4
Msa0118690 MtrunA17_Chr4g0067151 29.032 341 186 8 156 481 22 321 2.22e-35 134
Msa0118690 MtrunA17_Chr4g0067151 27.326 344 192 10 112 439 20 321 4.30e-27 111
Msa0118690 MtrunA17_Chr4g0067151 26.190 210 144 5 107 310 108 312 7.33e-15 75.5
Msa0118690 MtrunA17_Chr1g0172761 84.058 69 11 0 415 483 6 74 9.10e-34 122
Msa0118690 MtrunA17_Chr1g0172781 82.540 63 11 0 204 266 2 64 2.13e-29 110
Msa0118690 MtrunA17_Chr5g0401661 30.484 351 173 9 159 481 333 640 4.41e-28 118
Msa0118690 MtrunA17_Chr5g0401661 27.273 363 220 11 115 442 331 684 3.21e-24 106
Msa0118690 MtrunA17_Chr5g0401661 27.434 226 116 6 113 291 431 655 2.02e-14 75.9
Msa0118690 MtrunA17_Chr5g0401671 30.721 319 173 12 200 481 243 550 7.67e-28 117
Msa0118690 MtrunA17_Chr5g0401671 27.147 361 221 11 115 442 243 594 5.24e-25 108
Msa0118690 MtrunA17_Chr5g0401671 26.496 351 206 12 159 471 245 581 2.56e-22 100
Msa0118690 MtrunA17_Chr4g0053651 27.083 384 208 11 115 471 226 564 8.86e-28 116
Msa0118690 MtrunA17_Chr4g0053651 30.925 346 176 11 159 481 228 533 1.83e-27 115
Msa0118690 MtrunA17_Chr7g0253861 28.618 304 183 11 115 396 51 342 2.72e-27 112
Msa0118690 MtrunA17_Chr7g0253861 27.304 293 160 8 200 481 51 301 5.88e-22 97.1
Msa0118690 MtrunA17_Chr1g0200901 27.746 346 217 13 114 442 75 404 6.48e-23 100
Msa0118690 MtrunA17_Chr1g0200901 23.793 290 133 6 112 317 116 401 3.69e-17 83.6
Msa0118690 MtrunA17_Chr1g0200901 27.350 234 150 8 261 481 93 319 3.86e-15 77.4
Msa0118690 MtrunA17_Chr4g0059031 28.044 271 172 7 234 482 385 654 1.14e-21 99.0
Msa0118690 MtrunA17_Chr4g0059031 28.351 194 124 7 95 277 34 223 2.82e-12 69.3
Msa0118690 MtrunA17_Chr6g0448921 30.638 235 154 6 246 472 12 245 1.63e-21 98.2
Msa0118690 MtrunA17_Chr6g0448921 29.412 187 123 5 132 315 30 210 1.11e-19 92.4
Msa0118690 MtrunA17_Chr6g0448921 26.984 189 130 4 114 300 54 236 7.93e-14 73.9
Msa0118690 MtrunA17_Chr6g0448921 30.667 150 97 3 114 262 96 239 2.37e-12 69.3
Msa0118690 MtrunA17_Chr6g0448921 28.205 234 142 11 222 439 30 253 8.83e-11 64.3
Msa0118690 MtrunA17_Chr3g0136971 32.796 186 114 6 117 297 459 638 2.36e-21 97.4
Msa0118690 MtrunA17_Chr3g0136971 29.703 202 133 5 117 315 417 612 1.61e-17 85.5
Msa0118690 MtrunA17_Chr3g0136971 25.152 330 188 7 154 481 342 614 6.41e-17 83.6
Msa0118690 MtrunA17_Chr3g0136971 28.676 136 87 3 104 239 492 617 6.51e-12 67.8
Msa0118690 MtrunA17_Chr2g0281451 27.799 259 144 7 221 475 28 247 4.06e-21 97.1
Msa0118690 MtrunA17_Chr2g0281451 29.237 236 152 9 132 358 29 258 9.84e-19 89.7
Msa0118690 MtrunA17_Chr2g0281451 24.370 238 141 3 246 481 11 211 6.40e-16 80.9
Msa0118690 MtrunA17_Chr2g0281451 27.513 189 129 4 113 299 52 234 7.53e-13 71.2
Msa0118690 MtrunA17_Chr2g0281451 28.302 159 106 4 114 270 95 247 1.47e-12 70.5
Msa0118690 MtrunA17_Chr8g0392701 25.348 359 191 12 114 441 10 322 3.85e-20 91.3
Msa0118690 MtrunA17_Chr8g0392701 29.016 193 87 2 339 481 28 220 1.02e-17 84.0
Msa0118690 MtrunA17_Chr8g0392701 26.062 353 192 14 156 481 10 320 1.01e-15 78.2
Msa0118690 MtrunA17_Chr1g0197551 25.237 317 213 9 162 472 10 308 4.23e-18 87.8
Msa0118690 MtrunA17_Chr1g0197551 26.066 211 121 6 108 288 82 287 7.43e-15 77.8
Msa0118690 MtrunA17_Chr4g0069701 28.627 255 162 5 244 481 400 651 6.09e-18 87.0
Msa0118690 MtrunA17_Chr4g0069701 31.013 158 100 4 121 276 67 217 9.23e-13 70.9
Msa0118690 MtrunA17_Chr4g0069701 30.921 152 99 4 333 481 69 217 1.56e-12 70.1
Msa0118690 MtrunA17_Chr4g0069701 29.091 165 109 4 122 284 543 701 1.49e-11 67.0
Msa0118690 MtrunA17_Chr4g0069701 23.410 393 244 15 102 481 345 693 6.57e-11 65.1
Msa0118690 MtrunA17_Chr3g0144511 24.566 346 205 10 156 481 60 369 6.74e-18 85.5
Msa0118690 MtrunA17_Chr3g0144511 21.765 340 205 13 111 411 57 374 2.29e-12 68.6
Msa0118690 MtrunA17_Chr1g0172501 32.394 213 128 7 114 319 351 554 9.20e-18 86.3
Msa0118690 MtrunA17_Chr1g0172501 24.439 401 234 14 60 439 200 552 2.73e-16 81.6
Msa0118690 MtrunA17_Chr1g0172501 26.855 283 177 8 222 483 239 512 7.25e-16 80.1
Msa0118690 MtrunA17_Chr1g0172501 24.749 299 170 12 113 403 308 559 7.92e-16 80.1
Msa0118690 MtrunA17_Chr1g0172501 22.832 346 213 9 138 481 259 552 7.78e-15 77.0
Msa0118690 MtrunA17_Chr4g0070791 29.583 240 143 7 109 332 92 321 1.11e-17 84.0
Msa0118690 MtrunA17_Chr7g0233651 26.557 305 163 10 111 398 153 413 1.99e-17 84.3
Msa0118690 MtrunA17_Chr7g0233651 26.415 265 171 12 237 481 152 412 1.63e-13 72.4
Msa0118690 MtrunA17_Chr3g0093681 32.394 213 128 7 114 319 351 554 2.09e-17 85.1
Msa0118690 MtrunA17_Chr3g0093681 24.439 401 234 14 60 439 200 552 4.25e-16 80.9
Msa0118690 MtrunA17_Chr3g0093681 26.855 283 177 8 222 483 239 512 9.21e-16 79.7
Msa0118690 MtrunA17_Chr3g0093681 24.749 299 170 12 113 403 308 559 1.79e-15 79.0
Msa0118690 MtrunA17_Chr3g0093681 22.832 346 213 9 138 481 259 552 1.44e-14 76.3
Msa0118690 MtrunA17_Chr5g0405851 31.455 213 130 7 114 319 248 451 2.31e-17 84.3
Msa0118690 MtrunA17_Chr5g0405851 32.456 114 77 0 368 481 251 364 2.33e-16 81.3
Msa0118690 MtrunA17_Chr5g0405851 24.590 305 167 11 113 398 190 450 2.83e-16 81.3
Msa0118690 MtrunA17_Chr5g0405851 22.350 349 188 9 138 483 141 409 1.36e-13 72.8
Msa0118690 MtrunA17_Chr2g0295791 28.629 248 164 7 115 355 166 407 3.03e-17 84.3
Msa0118690 MtrunA17_Chr2g0295791 32.143 140 94 1 342 481 185 323 2.09e-15 78.6
Msa0118690 MtrunA17_Chr2g0295791 23.353 334 202 11 158 481 167 456 6.68e-13 70.9
Msa0118690 MtrunA17_Chr2g0295791 27.586 116 84 0 366 481 166 281 3.82e-11 65.1
Msa0118690 MtrunA17_Chr5g0442391 27.213 305 186 12 160 443 263 552 9.45e-17 82.8
Msa0118690 MtrunA17_Chr1g0194721 23.724 392 221 14 115 441 238 616 1.90e-16 82.8
Msa0118690 MtrunA17_Chr7g0266251 25.201 373 191 16 115 441 12 342 2.38e-16 80.5
Msa0118690 MtrunA17_Chr7g0266251 29.630 162 103 4 331 481 24 185 6.51e-13 70.1
Msa0118690 MtrunA17_Chr7g0266251 25.000 316 166 13 200 482 12 289 2.99e-12 67.8
Msa0118690 MtrunA17_Chr7g0266251 28.571 210 121 9 93 278 33 237 5.20e-11 63.9
Msa0118690 MtrunA17_Chr2g0284241 23.101 316 186 9 110 411 41 313 2.42e-16 80.1
Msa0118690 MtrunA17_Chr4g0035611 24.074 324 208 10 162 472 10 308 4.26e-16 81.6
Msa0118690 MtrunA17_Chr4g0035611 24.645 211 124 5 108 288 82 287 3.18e-14 75.5
Msa0118690 MtrunA17_Chr4g0035611 28.144 167 92 4 342 481 66 231 2.62e-11 66.2
Msa0118690 MtrunA17_Chr8g0390861 24.490 343 209 13 130 440 880 1204 5.34e-16 81.3
Msa0118690 MtrunA17_Chr8g0390861 26.838 272 160 10 115 359 949 1208 1.14e-13 73.9
Msa0118690 MtrunA17_Chr8g0390861 26.054 261 164 9 200 440 853 1104 2.99e-13 72.4
Msa0118690 MtrunA17_Chr8g0390861 27.660 141 98 3 342 481 884 1021 1.99e-11 66.6
Msa0118690 MtrunA17_Chr8g0352821 23.693 287 174 7 199 482 178 422 8.39e-16 80.5
Msa0118690 MtrunA17_Chr8g0352821 29.730 185 120 5 97 276 285 464 6.25e-15 77.4
Msa0118690 MtrunA17_Chr8g0352821 29.098 244 161 7 108 345 256 493 7.38e-15 77.4
Msa0118690 MtrunA17_Chr8g0352821 23.894 339 194 13 109 439 182 464 6.53e-13 71.2
Msa0118690 MtrunA17_Chr7g0228191 26.280 293 181 14 217 481 32 317 2.77e-15 77.0
Msa0118690 MtrunA17_Chr8g0392731 24.476 429 250 20 117 481 145 563 4.28e-15 77.8
Msa0118690 MtrunA17_Chr2g0331981 27.586 203 138 5 122 319 60 258 5.28e-15 77.8
Msa0118690 MtrunA17_Chr2g0331981 32.558 129 78 5 111 236 134 256 1.04e-12 70.9
Msa0118690 MtrunA17_Chr2g0331981 31.469 143 95 2 342 481 114 256 3.96e-12 68.9
Msa0118690 MtrunA17_Chr2g0292301 32.787 122 81 1 360 481 200 320 6.23e-15 77.0
Msa0118690 MtrunA17_Chr4g0004241 27.586 203 138 5 122 319 60 258 7.94e-15 77.4
Msa0118690 MtrunA17_Chr4g0004241 32.558 129 78 5 111 236 134 256 1.00e-12 70.9
Msa0118690 MtrunA17_Chr4g0004241 31.469 143 95 2 342 481 114 256 5.63e-12 68.6
Msa0118690 MtrunA17_Chr4g0058091 27.660 141 101 1 342 481 202 342 8.88e-15 76.6
Msa0118690 MtrunA17_Chr4g0058091 25.630 238 146 7 264 481 245 471 8.68e-12 67.4
Msa0118690 MtrunA17_Chr3g0095501 23.188 345 207 12 150 481 256 555 9.46e-15 76.6
Msa0118690 MtrunA17_Chr1g0185891 23.235 340 207 9 154 481 286 583 1.52e-14 76.3
Msa0118690 MtrunA17_Chr5g0395821 27.778 252 152 11 253 481 182 426 2.96e-14 74.7
Msa0118690 MtrunA17_Chr5g0395821 25.170 294 157 10 122 399 182 428 3.81e-13 71.2
Msa0118690 MtrunA17_Chr4g0057141 23.529 340 206 9 154 481 347 644 3.01e-14 75.5
Msa0118690 MtrunA17_Chr3g0111961 24.521 261 180 10 235 481 203 460 1.26e-13 72.8
Msa0118690 MtrunA17_Chr3g0099061 23.611 360 212 10 100 439 195 511 2.45e-13 72.0
Msa0118690 MtrunA17_Chr3g0099061 34.821 112 64 2 378 480 222 333 3.17e-12 68.6
Msa0118690 MtrunA17_Chr3g0099061 27.368 190 109 4 255 443 219 380 3.89e-12 68.6
Msa0118690 MtrunA17_Chr7g0267961 26.786 280 178 12 225 481 153 428 3.11e-13 71.6
Msa0118690 MtrunA17_Chr3g0098921 24.837 306 160 11 114 399 178 433 3.80e-13 71.2
Msa0118690 MtrunA17_Chr3g0098921 25.000 272 174 13 235 481 165 431 6.43e-12 67.4
Msa0118690 MtrunA17_Chr3g0116561 25.630 238 146 7 264 481 240 466 6.15e-13 70.9
Msa0118690 MtrunA17_Chr3g0116561 22.695 141 108 1 342 481 197 337 2.23e-11 65.9
Msa0118690 MtrunA17_Chr1g0162961 27.174 276 134 13 167 418 82 314 8.34e-13 70.1
Msa0118690 MtrunA17_Chr1g0208291 38.182 110 60 3 337 441 156 262 9.11e-13 70.5
Msa0118690 MtrunA17_Chr4g0026671 22.938 388 224 12 118 450 12 379 1.26e-12 70.5
Msa0118690 MtrunA17_Chr8g0377441 33.766 154 91 6 339 481 236 389 1.27e-12 69.7
Msa0118690 MtrunA17_Chr2g0331961 32.168 143 94 2 342 481 116 258 1.66e-12 68.6
Msa0118690 MtrunA17_Chr2g0331961 33.846 130 77 5 111 237 136 259 3.75e-12 67.4
Msa0118690 MtrunA17_Chr7g0234591 27.528 178 110 5 122 287 165 335 3.50e-12 68.2
Msa0118690 MtrunA17_Chr7g0220291 25.746 268 147 11 167 418 85 316 4.40e-12 67.8
Msa0118690 MtrunA17_Chr7g0235181 25.347 288 181 12 221 481 122 402 7.14e-12 67.4
Msa0118690 MtrunA17_Chr1g0148791 25.424 295 159 11 113 397 658 901 1.05e-11 67.4
Msa0118690 MtrunA17_Chr2g0321211 23.377 385 222 16 118 450 12 375 1.16e-11 67.4
Msa0118690 MtrunA17_Chr8g0383711 19.820 333 206 10 159 481 16 297 1.55e-11 65.1
Msa0118690 MtrunA17_Chr4g0057721 27.317 205 119 6 120 300 14 212 3.57e-11 65.1
Msa0118690 MtrunA17_Chr7g0246741 24.638 207 136 6 248 440 367 567 3.94e-11 65.5
Msa0118690 MtrunA17_Chr8g0384061 23.279 305 177 9 115 398 226 494 4.20e-11 65.5
Msa0118690 MtrunA17_Chr2g0285951 28.319 113 81 0 369 481 29 141 7.12e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0118690 AT5G52820.1 78.280 465 99 2 20 483 10 473 0.0 776
Msa0118690 AT4G02730.1 29.464 336 187 9 154 481 36 329 2.22e-36 137
Msa0118690 AT4G02730.1 27.243 301 193 7 114 397 38 329 6.50e-26 108
Msa0118690 AT4G02730.1 33.846 130 82 3 353 481 29 155 1.86e-19 89.7
Msa0118690 AT3G49660.1 30.473 338 183 10 112 439 17 312 4.91e-34 130
Msa0118690 AT3G49660.1 26.866 335 195 7 156 481 19 312 2.11e-32 126
Msa0118690 AT3G49660.1 31.176 170 111 5 110 276 146 312 1.06e-12 69.3
Msa0118690 AT5G67320.1 28.451 355 173 11 159 481 263 568 9.01e-26 111
Msa0118690 AT5G67320.1 25.515 388 193 13 115 442 261 612 7.20e-23 102
Msa0118690 AT5G67320.1 27.347 245 123 9 97 291 344 583 7.11e-12 68.2
Msa0118690 AT5G67320.1 24.762 315 155 11 200 481 261 526 2.62e-11 66.2
Msa0118690 AT2G43770.1 25.364 343 192 11 115 441 49 343 4.41e-24 103
Msa0118690 AT2G43770.1 25.939 293 164 8 200 481 49 299 5.39e-20 91.7
Msa0118690 AT5G16750.1 29.779 272 168 7 232 481 382 652 1.36e-22 102
Msa0118690 AT5G16750.1 23.743 358 207 10 112 449 351 662 1.43e-13 73.9
Msa0118690 AT5G16750.1 26.316 171 116 5 113 277 54 220 4.42e-12 68.9
Msa0118690 AT5G16750.1 24.573 293 173 13 42 319 341 600 7.85e-12 68.2
Msa0118690 AT5G16750.1 34.167 120 73 2 368 481 100 219 1.31e-11 67.8
Msa0118690 AT1G61210.3 27.099 262 151 6 222 481 29 252 1.79e-22 101
Msa0118690 AT1G61210.3 27.642 246 145 8 131 358 28 258 1.23e-19 93.2
Msa0118690 AT1G61210.3 23.950 238 142 3 246 481 11 211 5.77e-15 78.6
Msa0118690 AT1G61210.3 27.711 166 107 4 115 276 96 252 1.91e-11 67.0
Msa0118690 AT1G61210.1 27.099 262 151 6 222 481 29 252 1.81e-22 102
Msa0118690 AT1G61210.1 27.642 246 145 8 131 358 28 258 1.43e-19 92.8
Msa0118690 AT1G61210.1 23.950 238 142 3 246 481 11 211 8.38e-15 77.8
Msa0118690 AT1G61210.1 27.711 166 107 4 115 276 96 252 2.38e-11 67.0
Msa0118690 AT1G61210.2 27.099 262 151 6 222 481 29 252 1.91e-22 101
Msa0118690 AT1G61210.2 27.642 246 145 8 131 358 28 258 1.52e-19 92.8
Msa0118690 AT1G61210.2 23.950 238 142 3 246 481 11 211 8.37e-15 77.8
Msa0118690 AT1G61210.2 27.711 166 107 4 115 276 96 252 2.53e-11 67.0
Msa0118690 AT5G25150.2 32.796 186 114 6 117 297 458 637 3.18e-22 100
Msa0118690 AT5G25150.2 25.228 329 185 6 154 481 345 613 7.66e-18 87.0
Msa0118690 AT5G25150.2 30.172 232 152 6 105 332 403 628 1.23e-17 86.3
Msa0118690 AT5G25150.2 22.956 318 182 8 126 441 359 615 3.09e-14 75.9
Msa0118690 AT5G25150.2 32.353 136 82 3 104 239 491 616 5.15e-14 75.1
Msa0118690 AT1G71840.1 26.957 345 223 12 114 440 65 398 3.33e-22 99.0
Msa0118690 AT1G71840.1 28.216 241 140 9 263 481 85 314 5.76e-16 80.1
Msa0118690 AT5G25150.1 32.796 186 114 6 117 297 458 637 3.38e-22 100
Msa0118690 AT5G25150.1 25.228 329 185 6 154 481 345 613 7.18e-18 87.0
Msa0118690 AT5G25150.1 22.956 318 182 8 126 441 359 615 3.03e-14 75.9
Msa0118690 AT5G25150.1 32.353 136 82 3 104 239 491 616 5.80e-14 74.7
Msa0118690 AT1G11160.2 26.562 256 149 5 222 475 29 247 6.05e-21 97.1
Msa0118690 AT1G11160.2 30.081 246 137 10 132 358 29 258 9.71e-21 96.3
Msa0118690 AT1G11160.2 23.950 238 142 3 246 481 11 211 3.39e-16 82.4
Msa0118690 AT1G11160.2 28.221 163 110 3 115 276 96 252 1.53e-11 67.4
Msa0118690 AT1G11160.1 26.562 256 149 5 222 475 29 247 6.22e-21 97.1
Msa0118690 AT1G11160.1 30.081 246 137 10 132 358 29 258 9.72e-21 96.3
Msa0118690 AT1G11160.1 23.950 238 142 3 246 481 11 211 3.49e-16 82.0
Msa0118690 AT1G11160.1 28.221 163 110 3 115 276 96 252 1.45e-11 67.4
Msa0118690 AT5G50230.1 24.242 330 211 7 111 439 217 508 6.48e-21 95.9
Msa0118690 AT5G50230.1 24.583 240 150 6 262 481 238 466 1.41e-13 73.2
Msa0118690 AT5G50230.1 24.113 141 106 1 342 481 197 337 1.33e-11 67.0
Msa0118690 AT1G11160.4 26.562 256 149 5 222 475 29 247 7.49e-21 96.7
Msa0118690 AT1G11160.4 30.081 246 137 10 132 358 29 258 1.21e-20 96.3
Msa0118690 AT1G11160.4 23.950 238 142 3 246 481 11 211 3.84e-16 82.0
Msa0118690 AT1G11160.4 28.221 163 110 3 115 276 96 252 1.67e-11 67.4
Msa0118690 AT1G11160.3 28.139 231 128 4 246 475 12 205 8.46e-21 96.7
Msa0118690 AT1G11160.3 28.571 140 99 1 342 481 31 169 2.01e-14 76.6
Msa0118690 AT1G11160.3 32.759 116 78 0 366 481 12 127 2.62e-14 76.3
Msa0118690 AT1G11160.3 25.379 264 126 8 111 358 8 216 3.84e-12 69.3
Msa0118690 AT1G48630.1 31.174 247 122 7 246 481 11 220 1.09e-20 93.2
Msa0118690 AT1G48630.1 25.278 360 191 14 114 441 10 323 8.32e-20 90.9
Msa0118690 AT4G34460.1 25.797 345 201 11 156 481 60 368 4.62e-20 92.4
Msa0118690 AT4G34460.1 22.985 335 206 13 111 411 57 373 4.84e-11 64.7
Msa0118690 AT4G34460.4 25.507 345 202 11 156 481 55 363 5.97e-20 92.0
Msa0118690 AT4G34460.4 22.985 335 206 13 111 411 52 368 5.71e-11 64.7
Msa0118690 AT5G23430.3 28.226 248 160 6 246 481 12 253 6.08e-20 94.0
Msa0118690 AT5G23430.3 30.481 187 121 5 132 315 30 210 4.05e-19 91.3
Msa0118690 AT5G23430.3 29.940 167 108 5 114 277 96 256 5.91e-13 72.0
Msa0118690 AT5G23430.2 28.226 248 160 6 246 481 12 253 6.08e-20 94.0
Msa0118690 AT5G23430.2 30.481 187 121 5 132 315 30 210 4.05e-19 91.3
Msa0118690 AT5G23430.2 29.940 167 108 5 114 277 96 256 5.91e-13 72.0
Msa0118690 AT5G23430.1 28.226 248 160 6 246 481 12 253 6.47e-20 93.6
Msa0118690 AT5G23430.1 30.481 187 121 5 132 315 30 210 4.02e-19 91.3
Msa0118690 AT5G23430.1 29.940 167 108 5 114 277 96 256 5.76e-13 72.0
Msa0118690 AT5G23430.1 25.434 173 121 4 114 284 54 220 3.82e-11 66.2
Msa0118690 AT5G08390.1 31.016 187 120 5 132 315 30 210 1.58e-19 92.4
Msa0118690 AT5G08390.1 29.362 235 157 6 246 472 12 245 1.77e-19 92.4
Msa0118690 AT5G08390.1 30.000 150 98 3 114 262 96 239 6.35e-13 71.6
Msa0118690 AT5G08390.1 25.434 173 121 4 114 284 54 220 5.47e-11 65.5
Msa0118690 AT3G18130.1 25.348 359 190 13 115 441 11 323 3.26e-19 89.0
Msa0118690 AT3G18130.1 30.645 248 124 7 245 481 10 220 6.00e-19 88.2
Msa0118690 AT3G18130.1 25.641 351 191 13 159 481 13 321 1.11e-15 78.6
Msa0118690 AT4G34460.2 25.223 337 197 11 164 481 6 306 5.88e-19 88.2
Msa0118690 AT2G47410.4 22.775 382 227 12 115 441 50 418 4.71e-18 88.2
Msa0118690 AT2G47410.2 22.775 382 227 12 115 441 231 599 4.84e-18 88.2
Msa0118690 AT2G47410.1 22.775 382 227 12 115 441 232 600 5.10e-18 88.2
Msa0118690 AT2G41500.1 24.118 340 160 10 147 483 251 495 8.35e-18 86.7
Msa0118690 AT2G41500.1 28.774 212 137 6 114 319 334 537 1.01e-17 86.3
Msa0118690 AT2G41500.1 24.161 298 175 9 108 400 287 538 6.24e-15 77.8
Msa0118690 AT2G41500.1 22.936 327 204 8 117 439 253 535 6.94e-15 77.4
Msa0118690 AT2G41500.2 24.118 340 160 10 147 483 251 495 8.35e-18 86.7
Msa0118690 AT2G41500.2 28.774 212 137 6 114 319 334 537 1.01e-17 86.3
Msa0118690 AT2G41500.2 24.161 298 175 9 108 400 287 538 6.24e-15 77.8
Msa0118690 AT2G41500.2 22.936 327 204 8 117 439 253 535 6.94e-15 77.4
Msa0118690 AT1G18080.1 24.931 361 192 14 114 441 10 324 8.84e-18 84.7
Msa0118690 AT1G18080.1 31.174 247 119 8 248 481 13 221 8.74e-17 81.6
Msa0118690 AT1G18080.1 26.816 358 185 16 156 481 10 322 5.77e-15 76.3
Msa0118690 AT2G26060.1 26.486 370 198 14 115 444 16 351 2.85e-17 83.6
Msa0118690 AT2G26060.1 24.051 316 170 12 200 482 16 294 2.35e-11 65.5
Msa0118690 AT4G15900.1 28.112 249 164 8 115 355 172 413 3.74e-17 84.3
Msa0118690 AT4G15900.1 33.099 142 94 1 340 481 189 329 1.18e-14 76.6
Msa0118690 AT4G15900.1 25.641 234 162 6 109 339 250 474 3.17e-12 68.9
Msa0118690 AT4G15900.1 28.448 116 83 0 366 481 172 287 3.41e-12 68.9
Msa0118690 AT3G15980.5 26.006 323 208 9 122 439 60 356 1.17e-16 83.6
Msa0118690 AT3G15980.5 32.558 129 78 5 111 236 134 256 1.76e-12 70.5
Msa0118690 AT3G15980.5 32.639 144 92 4 342 481 114 256 2.68e-12 69.7
Msa0118690 AT4G29830.1 26.829 246 148 5 262 481 31 270 1.21e-16 81.3
Msa0118690 AT4G29830.1 29.952 207 124 6 109 299 92 293 6.54e-14 73.2
Msa0118690 AT4G29830.1 25.519 337 207 11 159 481 12 318 5.01e-13 70.5
Msa0118690 AT2G21390.1 24.606 317 215 9 162 472 10 308 1.36e-16 83.6
Msa0118690 AT2G21390.1 22.878 271 171 6 109 352 83 342 5.90e-13 72.0
Msa0118690 AT2G21390.1 28.144 167 92 4 342 481 66 231 6.12e-11 65.5
Msa0118690 AT2G47410.5 22.195 410 243 12 115 481 232 608 2.36e-16 82.8
Msa0118690 AT3G16650.1 25.911 247 171 4 115 355 166 406 2.62e-16 81.6
Msa0118690 AT3G16650.1 30.172 116 81 0 366 481 166 281 1.85e-13 72.8
Msa0118690 AT3G16650.1 33.099 142 93 2 340 481 183 322 3.01e-13 72.0
Msa0118690 AT2G47410.6 22.195 410 243 12 115 481 50 426 3.00e-16 82.4
Msa0118690 AT2G47410.3 22.195 410 243 12 115 481 50 426 3.00e-16 82.4
Msa0118690 AT5G13480.2 23.511 319 197 8 167 481 140 415 3.06e-16 82.0
Msa0118690 AT5G13480.2 23.864 264 161 6 222 482 147 373 1.05e-15 80.5
Msa0118690 AT5G13480.2 29.730 185 120 5 97 276 236 415 6.92e-15 77.8
Msa0118690 AT5G13480.2 29.577 213 139 6 108 315 207 413 1.87e-14 76.3
Msa0118690 AT5G13480.2 25.970 335 219 12 79 397 94 415 1.97e-14 76.3
Msa0118690 AT1G62020.1 24.290 317 216 9 162 472 10 308 3.53e-16 82.4
Msa0118690 AT1G62020.1 24.623 199 121 5 109 280 83 279 2.30e-12 70.1
Msa0118690 AT1G62020.1 28.743 167 91 4 342 481 66 231 1.86e-11 67.4
Msa0118690 AT5G13480.3 23.511 319 197 8 167 481 117 392 3.94e-16 81.6
Msa0118690 AT5G13480.3 23.864 264 161 6 222 482 124 350 1.38e-15 79.7
Msa0118690 AT5G13480.3 29.730 185 120 5 97 276 213 392 1.13e-14 77.0
Msa0118690 AT5G13480.3 25.135 370 220 13 79 439 71 392 2.73e-14 75.9
Msa0118690 AT5G13480.1 23.511 319 197 8 167 481 129 404 4.92e-16 81.3
Msa0118690 AT5G13480.1 23.864 264 161 6 222 482 136 362 1.61e-15 79.7
Msa0118690 AT5G13480.1 29.730 185 120 5 97 276 225 404 1.19e-14 77.0
Msa0118690 AT5G13480.1 25.135 370 220 13 79 439 83 404 3.34e-14 75.5
Msa0118690 AT5G13480.4 23.511 319 197 8 167 481 117 392 5.10e-16 81.3
Msa0118690 AT5G13480.4 23.864 264 161 6 222 482 124 350 1.64e-15 79.7
Msa0118690 AT5G13480.4 29.730 185 120 5 97 276 213 392 1.18e-14 77.0
Msa0118690 AT5G13480.4 25.135 370 220 13 79 439 71 392 3.04e-14 75.9
Msa0118690 AT1G49040.1 24.000 400 216 14 114 481 838 1181 7.65e-16 81.3
Msa0118690 AT3G15980.1 28.426 197 132 5 122 313 60 252 9.10e-16 80.9
Msa0118690 AT3G15980.1 32.558 129 78 5 111 236 134 256 1.41e-12 70.9
Msa0118690 AT3G15980.1 32.639 144 92 4 342 481 114 256 2.46e-12 70.1
Msa0118690 AT3G15980.7 28.426 197 132 5 122 313 60 252 1.01e-15 80.5
Msa0118690 AT3G15980.7 32.558 129 78 5 111 236 134 256 1.61e-12 70.5
Msa0118690 AT3G15980.7 32.639 144 92 4 342 481 114 256 2.44e-12 70.1
Msa0118690 AT3G15980.3 28.426 197 132 5 122 313 60 252 1.07e-15 80.5
Msa0118690 AT3G15980.3 32.558 129 78 5 111 236 134 256 1.79e-12 70.5
Msa0118690 AT3G15980.3 32.639 144 92 4 342 481 114 256 2.42e-12 70.1
Msa0118690 AT3G15980.6 28.426 197 132 5 122 313 60 252 1.07e-15 80.5
Msa0118690 AT3G15980.6 32.558 129 78 5 111 236 134 256 1.79e-12 70.5
Msa0118690 AT3G15980.6 32.639 144 92 4 342 481 114 256 2.42e-12 70.1
Msa0118690 AT3G15980.2 28.426 197 132 5 122 313 60 252 1.07e-15 80.5
Msa0118690 AT3G15980.2 32.558 129 78 5 111 236 134 256 1.79e-12 70.5
Msa0118690 AT3G15980.2 32.639 144 92 4 342 481 114 256 2.42e-12 70.1
Msa0118690 AT3G15980.4 28.426 197 132 5 122 313 60 252 1.07e-15 80.5
Msa0118690 AT3G15980.4 32.558 129 78 5 111 236 134 256 1.79e-12 70.5
Msa0118690 AT3G15980.4 32.639 144 92 4 342 481 114 256 2.42e-12 70.1
Msa0118690 AT1G10580.1 27.358 318 195 14 187 481 268 572 1.36e-15 79.7
Msa0118690 AT2G01330.1 25.000 436 241 18 117 481 143 563 1.82e-15 79.3
Msa0118690 AT2G01330.1 28.054 221 135 8 240 441 47 262 3.06e-12 69.3
Msa0118690 AT1G79990.2 27.919 197 133 5 122 313 60 252 3.47e-15 79.0
Msa0118690 AT1G79990.2 33.333 129 77 5 111 236 134 256 8.79e-13 71.2
Msa0118690 AT1G79990.2 31.469 143 95 2 342 481 114 256 9.26e-13 71.2
Msa0118690 AT1G79990.1 27.919 197 133 5 122 313 60 252 3.55e-15 79.0
Msa0118690 AT1G79990.1 31.469 143 95 2 342 481 114 256 8.97e-13 71.2
Msa0118690 AT1G79990.1 33.333 129 77 5 111 236 134 256 9.05e-13 71.2
Msa0118690 AT1G52360.3 27.919 197 133 5 122 313 60 252 3.55e-15 79.0
Msa0118690 AT1G52360.3 32.558 129 78 5 111 236 134 256 1.44e-12 70.9
Msa0118690 AT1G52360.3 31.469 143 95 2 342 481 114 256 4.51e-12 68.9
Msa0118690 AT1G52360.4 27.919 197 133 5 122 313 60 252 3.72e-15 79.0
Msa0118690 AT1G52360.4 32.558 129 78 5 111 236 134 256 1.59e-12 70.5
Msa0118690 AT1G52360.4 31.469 143 95 2 342 481 114 256 4.32e-12 69.3
Msa0118690 AT1G52360.1 27.919 197 133 5 122 313 60 252 3.72e-15 79.0
Msa0118690 AT1G52360.1 32.558 129 78 5 111 236 134 256 1.59e-12 70.5
Msa0118690 AT1G52360.1 31.469 143 95 2 342 481 114 256 4.32e-12 69.3
Msa0118690 AT1G52360.2 27.919 197 133 5 122 313 104 296 4.40e-15 78.6
Msa0118690 AT1G52360.2 32.558 129 78 5 111 236 178 300 1.73e-12 70.5
Msa0118690 AT1G52360.2 31.469 143 95 2 342 481 158 300 3.89e-12 69.3
Msa0118690 AT4G33260.1 27.273 286 167 12 140 398 149 420 1.16e-14 76.6
Msa0118690 AT4G33260.1 25.540 278 174 12 230 481 149 419 8.09e-13 70.9
Msa0118690 AT4G33270.1 27.273 286 167 12 140 398 159 430 1.33e-14 76.3
Msa0118690 AT4G33270.1 25.540 278 174 12 230 481 159 429 1.04e-12 70.5
Msa0118690 AT2G26060.2 26.579 380 181 16 115 464 16 327 3.46e-14 73.9
Msa0118690 AT2G26060.2 29.530 149 96 3 342 481 42 190 1.76e-11 65.9
Msa0118690 AT2G26060.2 24.051 316 170 12 200 482 16 294 1.92e-11 65.9
Msa0118690 AT3G05090.2 24.101 278 181 8 224 480 55 323 9.88e-14 74.3
Msa0118690 AT3G05090.3 24.101 278 181 8 224 480 55 323 9.88e-14 74.3
Msa0118690 AT3G05090.1 24.101 278 181 8 224 480 55 323 9.88e-14 74.3
Msa0118690 AT1G73720.1 35.135 111 64 1 378 480 221 331 1.56e-13 73.2
Msa0118690 AT1G73720.1 26.126 333 182 11 127 439 221 509 7.40e-13 71.2
Msa0118690 AT1G73720.1 27.895 190 107 5 255 443 218 378 9.82e-12 67.4
Msa0118690 AT1G73720.1 31.858 113 77 0 369 481 262 374 9.26e-11 64.3
Msa0118690 AT4G32990.1 25.069 363 188 17 115 444 16 327 3.37e-13 70.9
Msa0118690 AT2G32700.7 22.436 312 168 6 122 397 532 805 3.44e-13 72.4
Msa0118690 AT2G32700.2 22.436 312 168 6 122 397 513 786 3.61e-13 72.4
Msa0118690 AT2G32700.5 22.436 312 168 6 122 397 513 786 3.61e-13 72.4
Msa0118690 AT2G32700.1 22.436 312 168 6 122 397 513 786 3.61e-13 72.4
Msa0118690 AT2G32700.4 22.436 312 168 6 122 397 513 786 3.61e-13 72.4
Msa0118690 AT2G32700.3 22.436 312 168 6 122 397 513 786 3.61e-13 72.4
Msa0118690 AT2G32700.6 22.436 312 168 6 122 397 511 784 3.86e-13 72.4
Msa0118690 AT1G15440.2 24.125 257 156 5 228 481 326 546 5.83e-13 72.0
Msa0118690 AT1G15440.2 28.037 214 139 8 111 319 383 586 3.29e-12 69.7
Msa0118690 AT4G22910.1 24.621 264 176 10 235 481 200 457 5.97e-13 71.2
Msa0118690 AT5G13840.1 23.755 261 182 10 235 481 198 455 6.15e-13 71.2
Msa0118690 AT5G13840.1 32.576 132 86 2 351 481 196 325 4.59e-11 65.5
Msa0118690 AT5G13840.2 23.755 261 182 10 235 481 198 455 6.15e-13 71.2
Msa0118690 AT5G13840.2 32.576 132 86 2 351 481 196 325 4.59e-11 65.5
Msa0118690 AT1G15440.1 24.125 257 156 5 228 481 366 586 7.03e-13 71.6
Msa0118690 AT1G15440.1 28.037 214 139 8 111 319 423 626 3.72e-12 69.3
Msa0118690 AT5G08560.1 26.688 311 173 14 160 439 273 559 1.73e-12 70.1
Msa0118690 AT5G08560.2 26.688 311 173 14 160 439 273 559 1.73e-12 70.1
Msa0118690 AT5G08560.3 26.688 311 173 14 160 439 273 559 1.73e-12 70.1
Msa0118690 AT1G49040.3 28.283 198 117 7 114 295 838 1026 1.87e-12 70.5
Msa0118690 AT2G26490.1 24.855 346 208 12 122 441 99 418 2.27e-12 69.3
Msa0118690 AT4G33260.2 26.950 282 165 12 140 394 149 416 2.59e-12 68.9
Msa0118690 AT4G33260.2 25.455 275 172 12 230 478 149 416 3.25e-11 65.9
Msa0118690 AT3G44530.1 30.178 169 91 4 340 481 26 194 4.34e-12 69.3
Msa0118690 AT3G44530.1 22.895 380 226 15 115 446 9 369 8.05e-12 68.6
Msa0118690 AT5G64730.1 19.820 333 206 10 159 481 16 297 4.58e-12 67.4
Msa0118690 AT3G44530.2 30.178 169 91 4 340 481 26 194 4.60e-12 69.3
Msa0118690 AT3G44530.2 22.895 380 226 15 115 446 9 369 8.76e-12 68.2
Msa0118690 AT3G18860.2 27.155 232 148 9 222 439 32 256 9.31e-12 68.2
Msa0118690 AT3G18860.2 29.775 178 109 6 114 291 108 269 6.02e-11 65.5
Msa0118690 AT3G18860.1 27.155 232 148 9 222 439 32 256 1.01e-11 67.8
Msa0118690 AT3G18860.1 29.775 178 109 6 114 291 108 269 6.18e-11 65.5
Msa0118690 AT3G21540.1 33.962 106 70 0 376 481 546 651 1.05e-11 67.8
Msa0118690 AT3G21540.1 31.405 121 79 2 363 481 99 217 7.72e-11 65.1
Msa0118690 AT2G33340.2 24.503 302 183 10 101 397 246 507 1.22e-11 67.4
Msa0118690 AT2G33340.1 24.503 302 183 10 101 397 246 507 1.22e-11 67.4
Msa0118690 AT4G21130.1 32.174 115 77 1 367 481 203 316 1.81e-11 66.6
Msa0118690 AT4G11920.1 25.092 271 166 10 235 481 192 449 1.86e-11 66.6
Msa0118690 AT5G64630.2 31.538 130 77 3 113 236 58 181 2.09e-11 66.6
Msa0118690 AT3G50390.1 26.250 240 149 8 99 317 190 422 2.63e-11 66.2
Msa0118690 AT1G47610.1 29.167 216 129 7 249 441 134 348 2.72e-11 65.5
Msa0118690 AT5G64630.1 31.538 130 77 3 113 236 58 181 3.20e-11 65.5
Msa0118690 AT2G05720.1 28.205 156 87 4 353 483 89 244 3.30e-11 64.3
Msa0118690 AT5G27570.1 25.830 271 173 13 235 481 155 421 3.48e-11 65.5
Msa0118690 AT3G18060.1 35.455 110 63 3 337 441 155 261 3.77e-11 65.9
Msa0118690 AT5G27945.1 25.185 270 175 11 235 481 134 399 5.61e-11 65.1
Msa0118690 AT2G33340.3 25.481 208 139 5 101 303 246 442 7.13e-11 64.7

Find 167 sgRNAs with CRISPR-Local

Find 504 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATGTTCTGCGACAATTTC+TGG 0.090248 1_3:+41827583 Msa0118690:CDS
GTGATACCACTGTTCGATTT+TGG 0.162837 1_3:+41827869 Msa0118690:CDS
TTGCAGTAACATGTGTAAAA+TGG 0.208421 1_3:+41829796 Msa0118690:CDS
GATCCAGAGACCAATCTTTC+AGG 0.258373 1_3:-41832513 None:intergenic
CCACGGAAGGGAAGCTAATT+CGG 0.260975 1_3:+41830340 Msa0118690:CDS
ATGACCTGTCATGCGAGTTT+TGG 0.262059 1_3:-41832583 None:intergenic
AATGAGGAGGAAGAGGAATT+AGG 0.272113 1_3:-41826214 None:intergenic
ATGAGGAGGAAGAGGAATTA+GGG 0.281819 1_3:-41826213 None:intergenic
GGAGATGGTGTGATTTATAC+TGG 0.294268 1_3:+41829822 Msa0118690:CDS
AAGATGGGGATGCTCGTATA+TGG 0.296338 1_3:+41829730 Msa0118690:CDS
TTTATGCAGGGCACAAGAAC+TGG 0.307818 1_3:+41828711 Msa0118690:intron
GACTCATGTTAAACCTTATC+TGG 0.308094 1_3:-41833146 None:intergenic
CCTAATTGCTTTCCAGTTTG+TGG 0.309104 1_3:-41828812 None:intergenic
ATGATTTCACAATGTTCCTT+TGG 0.315344 1_3:+41832538 Msa0118690:CDS
TTGATAAATCTGTGAAGATA+TGG 0.321081 1_3:+41833067 Msa0118690:CDS
GTTACCTTCTTCATTTCATC+TGG 0.337050 1_3:-41831152 None:intergenic
AGGACTGTACAATCAAAGTT+TGG 0.337784 1_3:+41830313 Msa0118690:CDS
GGTATTATTGATAGTAGTTA+TGG 0.341365 1_3:+41833972 Msa0118690:three_prime_UTR
CTAATTGCTTTCCAGTTTGT+GGG 0.342023 1_3:-41828811 None:intergenic
TTGTTTCTTAAGGACAACTA+TGG 0.342085 1_3:+41833997 Msa0118690:three_prime_UTR
ATATTTAAAATTTGAATGTA+AGG 0.343964 1_3:+41834129 Msa0118690:three_prime_UTR
TTAGAGTGTCTGTGTGTATA+TGG 0.347013 1_3:-41826270 None:intergenic
AAAGTTGAAGCAAGACCTTC+CGG 0.352796 1_3:+41833486 Msa0118690:CDS
TCTAAGCAACTTGTTCTTCC+AGG 0.354958 1_3:-41833851 None:intergenic
CGGCAGCTAGCTAGTGGTTC+TGG 0.358331 1_3:+41827847 Msa0118690:CDS
AGTTATGGTATTGTTTCTTA+AGG 0.362122 1_3:+41833987 Msa0118690:three_prime_UTR
CTCGCTATCCATTGCCCGTC+AGG 0.362273 1_3:-41833036 None:intergenic
AATTGTAGGGCCACAAGAAA+TGG 0.365716 1_3:+41829640 Msa0118690:intron
TTAAACCTTATCTGGTAAAC+AGG 0.366253 1_3:-41833138 None:intergenic
TTTGGGGTGCTTGTTGATGA+AGG 0.371878 1_3:-41832565 None:intergenic
CTGCCTTCCGTGGTCATGTT+GGG 0.380577 1_3:+41833115 Msa0118690:CDS
CTAGCTAGCTGCCGCCCATC+AGG 0.391366 1_3:-41827838 None:intergenic
TAGAGTGTCTGTGTGTATAT+GGG 0.395412 1_3:-41826269 None:intergenic
GGCCACAAGAAATGGATTAC+TGG 0.396022 1_3:+41829648 Msa0118690:CDS
TGATTTCACAATGTTCCTTT+GGG 0.398841 1_3:+41832539 Msa0118690:CDS
CTTGTTAGTGGGAGCATGTC+AGG 0.400778 1_3:+41828770 Msa0118690:CDS
ACGAGCATCCCCATCTTTGC+TGG 0.404255 1_3:-41829724 None:intergenic
TTTGTAAGTGCCAGCAAAGA+TGG 0.406740 1_3:+41829714 Msa0118690:CDS
AATGCAATGGTAACAGCATA+TGG 0.416849 1_3:-41833752 None:intergenic
AATGGATTACTGGTATCTCT+TGG 0.424253 1_3:+41829658 Msa0118690:CDS
GACCAAGATGGTGGTCCTAT+TGG 0.428243 1_3:+41826455 Msa0118690:CDS
TGCAGTAACATGTGTAAAAT+GGG 0.431346 1_3:+41829797 Msa0118690:CDS
CCACAAACTGGAAAGCAATT+AGG 0.434125 1_3:+41828812 Msa0118690:CDS
ATATGTTGGGACCCACAAAC+TGG 0.434611 1_3:+41828800 Msa0118690:CDS
AGTTGCTTAGATTGAGTCTC+AGG 0.434716 1_3:+41833863 Msa0118690:three_prime_UTR
AAGATATGGAATGGCACTAC+AGG 0.439810 1_3:+41833081 Msa0118690:CDS
TTGGGCCTGTTTACCAGATA+AGG 0.439980 1_3:+41833133 Msa0118690:CDS
GAAACTAAGTGAAAATGATT+GGG 0.443720 1_3:-41826295 None:intergenic
CACGGAAGGGAAGCTAATTC+GGG 0.447321 1_3:+41830341 Msa0118690:CDS
ATGTACCTTCCTCAGAATAT+TGG 0.447583 1_3:+41826485 Msa0118690:CDS
TGAAACTAAGTGAAAATGAT+TGG 0.449382 1_3:-41826296 None:intergenic
GAAGCTACCTTCTCTCCATC+TGG 0.454990 1_3:-41833636 None:intergenic
ATCGATTCACAGGACGAATC+CGG 0.458255 1_3:-41827564 None:intergenic
GGACTGTACAATCAAAGTTT+GGG 0.462447 1_3:+41830314 Msa0118690:CDS
ATAGCCATTGAGATTAGGCC+TGG 0.463221 1_3:+41833833 Msa0118690:three_prime_UTR
CACCAATAGGACCACCATCT+TGG 0.464291 1_3:-41826457 None:intergenic
AAACTTTGATTGTACAGTCC+TGG 0.466024 1_3:-41830311 None:intergenic
GTCAGGAGAACTTATATGTT+GGG 0.474109 1_3:+41828787 Msa0118690:CDS
TACCATTGCATTGAAATCAA+TGG 0.476817 1_3:+41833763 Msa0118690:three_prime_UTR
GAAGGTAGCTTCTGGTGGTA+AGG 0.477510 1_3:+41833647 Msa0118690:CDS
AGGTACTGCCCCTGAAAGAT+TGG 0.483457 1_3:+41832503 Msa0118690:CDS
AACTTTGATTGTACAGTCCT+GGG 0.486690 1_3:-41830310 None:intergenic
CTAACAAGATACTTGCCATC+TGG 0.488855 1_3:-41828755 None:intergenic
GCCCCTGAAAGATTGGTCTC+TGG 0.490107 1_3:+41832510 Msa0118690:CDS
GATGGAGAGAAGGTAGCTTC+TGG 0.490774 1_3:+41833639 Msa0118690:CDS
CCGAATTAGCTTCCCTTCCG+TGG 0.491843 1_3:-41830340 None:intergenic
CTCAATGGCTATGTAGTATG+TGG 0.492256 1_3:-41833822 None:intergenic
TTGTAAGTGCCAGCAAAGAT+GGG 0.492317 1_3:+41829715 Msa0118690:CDS
GCTTGAGGTTGACAAACTAT+AGG 0.493760 1_3:-41827535 None:intergenic
CTGCCGCCCATCAGGACTAA+AGG 0.494058 1_3:-41827830 None:intergenic
ATGGATTACTGGTATCTCTT+GGG 0.494706 1_3:+41829659 Msa0118690:CDS
AGTGACAGAGGCGGCAGTAG+TGG 0.499910 1_3:+41826388 Msa0118690:CDS
ACTACATAGCCATTGAGATT+AGG 0.501458 1_3:+41833828 Msa0118690:three_prime_UTR
ATAGCATATATTCTCAATGA+TGG 0.501989 1_3:-41833712 None:intergenic
ACTGCCTTCCGTGGTCATGT+TGG 0.502272 1_3:+41833114 Msa0118690:CDS
AAGCTGCTTGAATTGCTTGA+GGG 0.504131 1_3:+41833891 Msa0118690:three_prime_UTR
TCTTCCAGGCCTAATCTCAA+TGG 0.506484 1_3:-41833837 None:intergenic
CACCCCAAAACTCGCATGAC+AGG 0.507186 1_3:+41832579 Msa0118690:CDS
AGGATAAAGTGTTGAAATTG+TGG 0.507603 1_3:+41833667 Msa0118690:CDS
TAGTAGTGTCAGTCTTTGAA+TGG 0.507953 1_3:+41834097 Msa0118690:three_prime_UTR
AGTGTTGCCTTTAGTCCTGA+TGG 0.511641 1_3:+41827823 Msa0118690:CDS
CTCCTCATTTCACGAAGCAC+AGG 0.515157 1_3:+41826228 Msa0118690:five_prime_UTR
AAGTTGAAGCAAGACCTTCC+GGG 0.515431 1_3:+41833487 Msa0118690:CDS
GACTGACACTACTAGTATCA+AGG 0.515469 1_3:-41834088 None:intergenic
TGTCAGGAGAACTTATATGT+TGG 0.516400 1_3:+41828786 Msa0118690:CDS
AGATGGGGATGCTCGTATAT+GGG 0.517465 1_3:+41829731 Msa0118690:CDS
GACGGCAAGGAGCATTCAAA+TGG 0.517790 1_3:-41829689 None:intergenic
AGCCATTGATTTCAATGCAA+TGG 0.522076 1_3:-41833765 None:intergenic
GATGGCAAGTATCTTGTTAG+TGG 0.522848 1_3:+41828758 Msa0118690:CDS
TGTTGTTTGTTACAGGTCCC+AGG 0.525353 1_3:+41830293 Msa0118690:intron
ATCCAGAGACCAATCTTTCA+GGG 0.525581 1_3:-41832512 None:intergenic
AAACTAAGTGAAAATGATTG+GGG 0.526885 1_3:-41826294 None:intergenic
CAAGGAGCATTCAAATGGAC+AGG 0.535892 1_3:-41829684 None:intergenic
TGTGTATATGGGGTTTATTG+AGG 0.536310 1_3:-41826258 None:intergenic
CCCAGTATGATCAAAAGCTC+CGG 0.536410 1_3:-41831114 None:intergenic
CATTTCAGTCTCTGTGGAGA+AGG 0.539892 1_3:+41827507 Msa0118690:intron
GTCCTGTGCTTCGTGAAATG+AGG 0.540395 1_3:-41826230 None:intergenic
TGTGTAAAATGGGGTGGAGA+TGG 0.545822 1_3:+41829807 Msa0118690:CDS
CTTCATCAGCATGGCCCGGA+AGG 0.545921 1_3:-41833501 None:intergenic
ATCTCCAGATGAAATGAAGA+AGG 0.546334 1_3:+41831148 Msa0118690:CDS
AGGTACATAGGAGCACCAAT+AGG 0.552233 1_3:-41826470 None:intergenic
ACTGGGTACTTTGTATTGCA+TGG 0.552743 1_3:+41828729 Msa0118690:CDS
TTCGTGAAATGAGGAGGAAG+AGG 0.554475 1_3:-41826221 None:intergenic
TAAAGTGTTGAAATTGTGGA+TGG 0.557214 1_3:+41833671 Msa0118690:CDS
GACAGAGGCGGCAGTAGTGG+AGG 0.558079 1_3:+41826391 Msa0118690:CDS
TGCAAGGGCTAGCCATAAGA+TGG 0.559528 1_3:+41834055 Msa0118690:three_prime_UTR
TTGGGGTGCTTGTTGATGAA+GGG 0.559855 1_3:-41832564 None:intergenic
GTATGTAGGTCGCTCTTGAA+AGG 0.560150 1_3:+41832466 Msa0118690:intron
TCTGTTGATTGGAGTCCAGA+TGG 0.560782 1_3:+41833621 Msa0118690:CDS
TTGGAGTCCAGATGGAGAGA+AGG 0.560878 1_3:+41833629 Msa0118690:CDS
GTCGCAGAACATCGATTCAC+AGG 0.563941 1_3:-41827574 None:intergenic
GTGTTGCCTTTAGTCCTGAT+GGG 0.565420 1_3:+41827824 Msa0118690:CDS
GAAGCTGCTTGAATTGCTTG+AGG 0.566209 1_3:+41833890 Msa0118690:three_prime_UTR
AGGCCCAACATGACCACGGA+AGG 0.566767 1_3:-41833118 None:intergenic
ACACCAATGTACACATGCAC+AGG 0.572728 1_3:+41827907 Msa0118690:CDS
TACCAGTAATCCATTTCTTG+TGG 0.574299 1_3:-41829650 None:intergenic
GTTGAAATTGTGGATGGGAT+AGG 0.576409 1_3:+41833677 Msa0118690:CDS
AGAGTGTCTGTGTGTATATG+GGG 0.580073 1_3:-41826268 None:intergenic
GCACTTACAAAGCGACGGCA+AGG 0.581816 1_3:-41829702 None:intergenic
ACTGAGTATGTTCTTCGCAC+CGG 0.583588 1_3:+41831095 Msa0118690:CDS
ATATTCTGAGGAAGGTACAT+AGG 0.585151 1_3:-41826482 None:intergenic
ACGATGAGTTGAAGCTGTTG+AGG 0.585979 1_3:-41826509 None:intergenic
TCGCATGACAGGTCATCAGC+AGG 0.586232 1_3:+41832590 Msa0118690:CDS
TGTATTGCATGGTCACCAGA+TGG 0.592466 1_3:+41828740 Msa0118690:CDS
TAATGAACTCTGAGTGTGCA+AGG 0.592466 1_3:+41834039 Msa0118690:three_prime_UTR
GAAGCTAATTCGGGAACTGA+AGG 0.593043 1_3:+41830350 Msa0118690:CDS
AAATTTGTCACTGCCTTCCG+TGG 0.593446 1_3:+41833105 Msa0118690:CDS
TAGCAAAGATTCTACACTCA+AGG 0.593688 1_3:+41833316 Msa0118690:CDS
TTATGCAGGGCACAAGAACT+GGG 0.594294 1_3:+41828712 Msa0118690:intron
TTACATCATTTCAGTCTCTG+TGG 0.596930 1_3:+41827501 Msa0118690:intron
TTGAGAATATATGCTATAGT+CGG 0.599428 1_3:+41833718 Msa0118690:three_prime_UTR
GATGGGCGGCAGCTAGCTAG+TGG 0.603399 1_3:+41827841 Msa0118690:CDS
AAAGTTTGGGAAACCACGGA+AGG 0.603610 1_3:+41830327 Msa0118690:CDS
CATACTTCATCAGCATGGCC+CGG 0.604360 1_3:-41833505 None:intergenic
ATGGCAAGTATCTTGTTAGT+GGG 0.604965 1_3:+41828759 Msa0118690:CDS
GAGGACCAATATTCTGAGGA+AGG 0.604981 1_3:-41826490 None:intergenic
CGAATCCGGAAAACAGCTTG+AGG 0.614227 1_3:-41827550 None:intergenic
AATCGTATAATTGAACAAAG+AGG 0.614350 1_3:+41826343 Msa0118690:five_prime_UTR
GAGATGGTGTGATTTATACT+GGG 0.617212 1_3:+41829823 Msa0118690:CDS
AAGAAATGTATTGTACTCTG+TGG 0.623068 1_3:+41829765 Msa0118690:CDS
TGCTGGCACTTACAAAGCGA+CGG 0.624969 1_3:-41829707 None:intergenic
AAGTTTGGGAAACCACGGAA+GGG 0.636040 1_3:+41830328 Msa0118690:CDS
AGATATGGAATGGCACTACA+GGG 0.637294 1_3:+41833082 Msa0118690:CDS
TGTTGAGGACCAATATTCTG+AGG 0.650065 1_3:-41826494 None:intergenic
AAATCTGTGAAGATATGGAA+TGG 0.651736 1_3:+41833072 Msa0118690:CDS
TGTAAGTGCCAGCAAAGATG+GGG 0.651945 1_3:+41829716 Msa0118690:CDS
AAACCTGTGCATGTGTACAT+TGG 0.651974 1_3:-41827910 None:intergenic
TGTTGATGAAGGGTTCCCAA+AGG 0.656500 1_3:-41832554 None:intergenic
TTGCCTTTAGTCCTGATGGG+CGG 0.657528 1_3:+41827827 Msa0118690:CDS
GTAACATGTGTAAAATGGGG+TGG 0.657634 1_3:+41829801 Msa0118690:CDS
AATGAACTCTGAGTGTGCAA+GGG 0.658014 1_3:+41834040 Msa0118690:three_prime_UTR
AAAGTGTTGAAATTGTGGAT+GGG 0.662627 1_3:+41833672 Msa0118690:CDS
GGAGATTGACACAGTGACAG+AGG 0.664119 1_3:+41826376 Msa0118690:CDS
GAAAGGTACAACACAACGAG+AGG 0.664486 1_3:+41832483 Msa0118690:CDS
AATCAAAGTTTGGGAAACCA+CGG 0.664975 1_3:+41830323 Msa0118690:CDS
GGAGAGAAGGTAGCTTCTGG+TGG 0.666605 1_3:+41833642 Msa0118690:CDS
TCCAGAGACCAATCTTTCAG+GGG 0.670077 1_3:-41832511 None:intergenic
ATCAATGGCTGACTATTGTG+TGG 0.672413 1_3:+41833778 Msa0118690:three_prime_UTR
ACAAACATACTTCATCAGCA+TGG 0.676482 1_3:-41833510 None:intergenic
AAACAGGCCCAACATGACCA+CGG 0.685929 1_3:-41833122 None:intergenic
CTGTGCTTCGTGAAATGAGG+AGG 0.690598 1_3:-41826227 None:intergenic
GATTGACACAGTGACAGAGG+CGG 0.695123 1_3:+41826379 Msa0118690:CDS
CACATGTTACTGCAAGTGTG+TGG 0.697887 1_3:-41829788 None:intergenic
AAGATCCCAAAATCGAACAG+TGG 0.710715 1_3:-41827875 None:intergenic
CTATTGACAGACCAAGATGG+TGG 0.721233 1_3:+41826446 Msa0118690:CDS
TGTCTATTGACAGACCAAGA+TGG 0.741032 1_3:+41826443 Msa0118690:CDS
GCAGTAACATGTGTAAAATG+GGG 0.768702 1_3:+41829798 Msa0118690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTAATGGAAAA+TGG - chr1_3:41828637-41828656 None:intergenic 10.0%
!! AAAATGAAATTGATAAATAA+AGG - chr1_3:41830706-41830725 None:intergenic 10.0%
!! AATAAATATATCCATTTATT+AGG + chr1_3:41830726-41830745 Msa0118690:intron 10.0%
!!! ATATTTTGGTATTTATTTTA+GGG + chr1_3:41831038-41831057 Msa0118690:intron 10.0%
!! GTAATATCAATATAAAATAA+GGG - chr1_3:41831707-41831726 None:intergenic 10.0%
!! AGTAATATCAATATAAAATA+AGG - chr1_3:41831708-41831727 None:intergenic 10.0%
!!! ATTTTATATTGATATTACTT+TGG + chr1_3:41831709-41831728 Msa0118690:intron 10.0%
!!! ATTTGAAGAAATAAAAATTT+TGG - chr1_3:41832662-41832681 None:intergenic 10.0%
!!! TAACCATAATTTTTATTTTT+TGG + chr1_3:41833339-41833358 Msa0118690:intron 10.0%
!! TAACCAAAAAATAAAAATTA+TGG - chr1_3:41833345-41833364 None:intergenic 10.0%
!!! TATTTTTTGGTTAATATTTT+TGG + chr1_3:41833352-41833371 Msa0118690:intron 10.0%
!! AAATTTACATTTGAAAATTG+TGG + chr1_3:41826936-41826955 Msa0118690:intron 15.0%
!!! AAGTTATTTTGACATAAATT+AGG - chr1_3:41827163-41827182 None:intergenic 15.0%
!!! AATATGATTTAACATTGATT+TGG + chr1_3:41827267-41827286 Msa0118690:intron 15.0%
!! TTAAATGAATAAGTTATGTT+TGG - chr1_3:41827971-41827990 None:intergenic 15.0%
!! TAGAAACAAATACTTATTTA+AGG - chr1_3:41828447-41828466 None:intergenic 15.0%
!! ATATATACATTTCTAATAAG+TGG - chr1_3:41828513-41828532 None:intergenic 15.0%
!!! TAATTTTTACTCTTTTTGAA+TGG - chr1_3:41828594-41828613 None:intergenic 15.0%
!!! CAAATATTTTAGAAAACAAT+AGG + chr1_3:41829225-41829244 Msa0118690:intron 15.0%
!! AGATTAATAATTGAAAAAAG+AGG + chr1_3:41829284-41829303 Msa0118690:intron 15.0%
!!! TTTTTATAATTTTCAAGTGT+GGG - chr1_3:41829405-41829424 None:intergenic 15.0%
!!! TTTTTTATAATTTTCAAGTG+TGG - chr1_3:41829406-41829425 None:intergenic 15.0%
!! AAATAGAATAAAAGAATATC+AGG + chr1_3:41829423-41829442 Msa0118690:intron 15.0%
!! ATATTTATAACAACTACTTT+GGG + chr1_3:41829524-41829543 Msa0118690:intron 15.0%
!!! ATTTGAAATATACTAATTGT+AGG + chr1_3:41829626-41829645 Msa0118690:intron 15.0%
!!! TTTGAAATATACTAATTGTA+GGG + chr1_3:41829627-41829646 Msa0118690:intron 15.0%
!!! CTTTTTTAATAATACAATAG+TGG + chr1_3:41830225-41830244 Msa0118690:intron 15.0%
!!! TTTTACTATTTAAATTCTCA+AGG + chr1_3:41830440-41830459 Msa0118690:intron 15.0%
!! TTGAGATATCATTTAAAAAT+GGG + chr1_3:41830535-41830554 Msa0118690:intron 15.0%
!!! ATACTATTGTTTTCATATTT+TGG + chr1_3:41831024-41831043 Msa0118690:intron 15.0%
!!! CATATTTTGGTATTTATTTT+AGG + chr1_3:41831037-41831056 Msa0118690:intron 15.0%
!!! TTTTTGTAGTAAGAAATATT+CGG + chr1_3:41831366-41831385 Msa0118690:intron 15.0%
!! CTTATAAAAAGTTAAAACAA+TGG + chr1_3:41831523-41831542 Msa0118690:intron 15.0%
!! TAAAAAATAATAATTGACAG+TGG + chr1_3:41831844-41831863 Msa0118690:intron 15.0%
!! AATCCAAATAAATTTATGTT+GGG - chr1_3:41831909-41831928 None:intergenic 15.0%
!!! CTTTCTTGTTATAAAAATAT+CGG + chr1_3:41832038-41832057 Msa0118690:intron 15.0%
!!! GATTTAATGTTATTTTTAGT+TGG + chr1_3:41832108-41832127 Msa0118690:intron 15.0%
!! AAAGATAGACAAAATAATTA+AGG - chr1_3:41832838-41832857 None:intergenic 15.0%
!!! TTGGTTTGTATAATAATTAT+TGG + chr1_3:41833381-41833400 Msa0118690:intron 15.0%
!! TTCAGTATAAAAAACATTTG+TGG + chr1_3:41826710-41826729 Msa0118690:intron 20.0%
!! GATAATGAAGTTTAAATACA+TGG + chr1_3:41826762-41826781 Msa0118690:intron 20.0%
!! AATACATGGTTAATTATGTT+CGG + chr1_3:41826776-41826795 Msa0118690:intron 20.0%
!!! GTTTGATAATATAATACGTT+TGG + chr1_3:41827080-41827099 Msa0118690:intron 20.0%
!! AATGTGTTAATCATCTAAAT+TGG + chr1_3:41827122-41827141 Msa0118690:intron 20.0%
!!! TTTAACATTGATTTGGTTAT+CGG + chr1_3:41827274-41827293 Msa0118690:intron 20.0%
!!! TCTGATATATAAAAAGCATA+CGG - chr1_3:41827334-41827353 None:intergenic 20.0%
!! GAAACTATCAATTGATATTT+AGG + chr1_3:41828000-41828019 Msa0118690:intron 20.0%
!! ATAGATTGTGTAGTTTAAAT+CGG + chr1_3:41828106-41828125 Msa0118690:intron 20.0%
!!! TGCATGCTTTTTTTTTTTAA+TGG - chr1_3:41828644-41828663 None:intergenic 20.0%
!! TCCATTATTTATTATTCACT+CGG - chr1_3:41829069-41829088 None:intergenic 20.0%
!!! GTGAATAATAAATAATGGAT+TGG + chr1_3:41829070-41829089 Msa0118690:intron 20.0%
!!! TATTTTAGATGAACATTGTT+TGG + chr1_3:41829492-41829511 Msa0118690:intron 20.0%
!! CATATTTATAACAACTACTT+TGG + chr1_3:41829523-41829542 Msa0118690:intron 20.0%
!! TATACCATCTAATTGTTTAT+TGG + chr1_3:41829595-41829614 Msa0118690:intron 20.0%
!! ATATAACATAAAATTCCTTG+AGG - chr1_3:41830380-41830399 None:intergenic 20.0%
!! TAAATGATATCTCAACATAT+TGG - chr1_3:41830530-41830549 None:intergenic 20.0%
!! GTTGAGATATCATTTAAAAA+TGG + chr1_3:41830534-41830553 Msa0118690:intron 20.0%
!! TAAACAATAGATTATAGATC+AGG - chr1_3:41830759-41830778 None:intergenic 20.0%
!!! TTTTGTAGTAAGAAATATTC+GGG + chr1_3:41831367-41831386 Msa0118690:intron 20.0%
!!! AATTATGTTTGTTTAAGATG+AGG - chr1_3:41831472-41831491 None:intergenic 20.0%
!! TAAATTAATAATGTGGTTTC+AGG + chr1_3:41831876-41831895 Msa0118690:intron 20.0%
!! AAACCCAACATAAATTTATT+TGG + chr1_3:41831903-41831922 Msa0118690:intron 20.0%
!! CAATCCAAATAAATTTATGT+TGG - chr1_3:41831910-41831929 None:intergenic 20.0%
!! AATTTATTTGGATTGTTGAT+TGG + chr1_3:41831915-41831934 Msa0118690:intron 20.0%
!! CAAGGAAAATATAATCTTAA+CGG - chr1_3:41832243-41832262 None:intergenic 20.0%
!!! TGAAATTATTTTGGACATTT+AGG + chr1_3:41832267-41832286 Msa0118690:intron 20.0%
!!! GAAATTATTTTGGACATTTA+GGG + chr1_3:41832268-41832287 Msa0118690:intron 20.0%
!! AAATTGTGATTTAATCTGTA+TGG - chr1_3:41832908-41832927 None:intergenic 20.0%
!!! TAGTTATGTTTTTATGCATT+AGG + chr1_3:41832937-41832956 Msa0118690:intron 20.0%
!!! TTAGGCAAATTTCATTTTTT+AGG + chr1_3:41832955-41832974 Msa0118690:intron 20.0%
!!! AGTTCTAAGCAAAATATATT+TGG - chr1_3:41833232-41833251 None:intergenic 20.0%
!!! TTTGGTTAATATTTTTGGTT+TGG + chr1_3:41833357-41833376 Msa0118690:intron 20.0%
!!! TTAATATTTTTGGTTTGGTT+TGG + chr1_3:41833362-41833381 Msa0118690:intron 20.0%
!!! TTTTAAAAATCACTCGTATT+TGG - chr1_3:41833544-41833563 None:intergenic 20.0%
!!! TTTTTTCAAGTCTTTTTTTC+TGG + chr1_3:41833951-41833970 Msa0118690:three_prime_UTR 20.0%
!!! ATGGCAATTTTGTATTTTTT+TGG + chr1_3:41834016-41834035 Msa0118690:three_prime_UTR 20.0%
! AAACTAAGTGAAAATGATTG+GGG - chr1_3:41826297-41826316 None:intergenic 25.0%
! GAAACTAAGTGAAAATGATT+GGG - chr1_3:41826298-41826317 None:intergenic 25.0%
! TGAAACTAAGTGAAAATGAT+TGG - chr1_3:41826299-41826318 None:intergenic 25.0%
! AATCGTATAATTGAACAAAG+AGG + chr1_3:41826343-41826362 Msa0118690:five_prime_UTR 25.0%
! AACACAGAAACTAGAAAAAA+GGG - chr1_3:41826566-41826585 None:intergenic 25.0%
! AAACACAGAAACTAGAAAAA+AGG - chr1_3:41826567-41826586 None:intergenic 25.0%
! GATTAACACATTCAAATACA+TGG - chr1_3:41827114-41827133 None:intergenic 25.0%
!!! TAACTTAGCTCTATTGTTAA+AGG + chr1_3:41827177-41827196 Msa0118690:intron 25.0%
! ACATAAAAGTTAAACGTTTG+TGG + chr1_3:41827704-41827723 Msa0118690:intron 25.0%
!!! TGTATTGTTGTCATTTTCTT+TGG + chr1_3:41827753-41827772 Msa0118690:intron 25.0%
! CAACACAAGGAATAATAAAT+TGG + chr1_3:41828190-41828209 Msa0118690:intron 25.0%
! ATAACACAAATCAGAATTCA+AGG - chr1_3:41828863-41828882 None:intergenic 25.0%
!!! CTTTAAAATGCAAAATCATG+AGG - chr1_3:41828905-41828924 None:intergenic 25.0%
! ACCGAGTGAATAATAAATAA+TGG + chr1_3:41829065-41829084 Msa0118690:intron 25.0%
! TTTATTAATTCAGTGTTTCC+TGG + chr1_3:41829447-41829466 Msa0118690:intron 25.0%
! TTATTAATTCAGTGTTTCCT+GGG + chr1_3:41829448-41829467 Msa0118690:intron 25.0%
! AGTTGTTATAAATATGTACG+TGG - chr1_3:41829519-41829538 None:intergenic 25.0%
! TTGTCCAATAAACAATTAGA+TGG - chr1_3:41829602-41829621 None:intergenic 25.0%
! AAAAATACTGAGAATTTGGA+AGG - chr1_3:41829864-41829883 None:intergenic 25.0%
! TCTAGTATACTTTGATCTTT+AGG + chr1_3:41830038-41830057 Msa0118690:intron 25.0%
!! ATGGGTTAAAATCAGTAAAT+GGG - chr1_3:41830117-41830136 None:intergenic 25.0%
!!! ACTTTTAATTCAACTAATCC+TGG + chr1_3:41830175-41830194 Msa0118690:intron 25.0%
! AGTAGTAATATGGAAACATA+GGG - chr1_3:41830259-41830278 None:intergenic 25.0%
! AAGTAGTAATATGGAAACAT+AGG - chr1_3:41830260-41830279 None:intergenic 25.0%
! TATGTTTCCATATTACTACT+TGG + chr1_3:41830259-41830278 Msa0118690:intron 25.0%
! ATGTTTCCATATTACTACTT+GGG + chr1_3:41830260-41830279 Msa0118690:intron 25.0%
!! AAATTCTCAAGGATTTTACT+AGG + chr1_3:41830451-41830470 Msa0118690:intron 25.0%
! TGTGAAAAAGGTTTATACAT+AGG + chr1_3:41830616-41830635 Msa0118690:intron 25.0%
! TAAATGGTATCTCAACATAT+TGG - chr1_3:41830811-41830830 None:intergenic 25.0%
!! CAGGAAAGTAACTTTTTAAA+TGG - chr1_3:41830827-41830846 None:intergenic 25.0%
!! CATTTAAAAAGTTACTTTCC+TGG + chr1_3:41830825-41830844 Msa0118690:intron 25.0%
! TGATACAAAGTAAGTATTAG+TGG - chr1_3:41830908-41830927 None:intergenic 25.0%
! TCATTAAATTCCAGATATGT+GGG - chr1_3:41831273-41831292 None:intergenic 25.0%
! TTTGTAGTAAGAAATATTCG+GGG + chr1_3:41831368-41831387 Msa0118690:intron 25.0%
! CAATTGCAATTCAATATCAT+AGG - chr1_3:41831595-41831614 None:intergenic 25.0%
!! ATATCATAATGTCTTTTGCT+CGG + chr1_3:41831812-41831831 Msa0118690:intron 25.0%
!! TGCATTGTTCTTAGATTTTA+TGG + chr1_3:41832198-41832217 Msa0118690:intron 25.0%
! GAAAATATAATCTTAACGGA+GGG - chr1_3:41832239-41832258 None:intergenic 25.0%
! AATGTCCAAAATAATTTCAG+AGG - chr1_3:41832266-41832285 None:intergenic 25.0%
!!! TCTGATTTATTTTCTCCTTT+TGG + chr1_3:41832302-41832321 Msa0118690:intron 25.0%
!!! AAATTTTGGTTTGTTCTCAT+TGG - chr1_3:41832648-41832667 None:intergenic 25.0%
! TCAGTATTTAGTAGAAAACT+AGG + chr1_3:41832730-41832749 Msa0118690:intron 25.0%
! TGCACATAAAATGGTTAAAT+AGG + chr1_3:41832788-41832807 Msa0118690:intron 25.0%
! TTGATAAATCTGTGAAGATA+TGG + chr1_3:41833067-41833086 Msa0118690:CDS 25.0%
!! AATGTAATTTTCCATTCTTG+TGG + chr1_3:41833562-41833581 Msa0118690:intron 25.0%
!!! AGTTTATTTTATTGCTCTGT+AGG + chr1_3:41833593-41833612 Msa0118690:intron 25.0%
! ATAGCATATATTCTCAATGA+TGG - chr1_3:41833715-41833734 None:intergenic 25.0%
! TTGAGAATATATGCTATAGT+CGG + chr1_3:41833718-41833737 Msa0118690:three_prime_UTR 25.0%
!! GGTATTATTGATAGTAGTTA+TGG + chr1_3:41833972-41833991 Msa0118690:three_prime_UTR 25.0%
!! AGTTATGGTATTGTTTCTTA+AGG + chr1_3:41833987-41834006 Msa0118690:three_prime_UTR 25.0%
ATATTATCAAACATCAGCCA+TGG - chr1_3:41827072-41827091 None:intergenic 30.0%
!! TGCTTTTTATATATCAGACG+AGG + chr1_3:41827336-41827355 Msa0118690:CDS 30.0%
CAAAGGTTAGTAGTCATATT+TGG + chr1_3:41827396-41827415 Msa0118690:intron 30.0%
TGTTCTGTCAATCATTGTAA+TGG + chr1_3:41827627-41827646 Msa0118690:intron 30.0%
!!! TGCTTTTGAAGATTTTAGCT+TGG + chr1_3:41827730-41827749 Msa0118690:intron 30.0%
ATGAATAAGTTATGTTTGGC+AGG - chr1_3:41827967-41827986 None:intergenic 30.0%
TTCTGATAGATGCCTATTAT+CGG + chr1_3:41828130-41828149 Msa0118690:intron 30.0%
!! TCCTTTTTGAAGATTTACAG+AGG + chr1_3:41828391-41828410 Msa0118690:intron 30.0%
ACCTCTGTAAATCTTCAAAA+AGG - chr1_3:41828395-41828414 None:intergenic 30.0%
! AAAAAAAAGCATGCACTCTT+AGG + chr1_3:41828649-41828668 Msa0118690:intron 30.0%
! TAGTTGTTTGCATTTTATGC+AGG + chr1_3:41828698-41828717 Msa0118690:intron 30.0%
! AGTTGTTTGCATTTTATGCA+GGG + chr1_3:41828699-41828718 Msa0118690:intron 30.0%
TCTGACAGTATATCCTTAAT+TGG - chr1_3:41828942-41828961 None:intergenic 30.0%
TATATTGTCAGTATAGTCGA+TGG + chr1_3:41828971-41828990 Msa0118690:intron 30.0%
! ATCGATTGCAACTGAAATTT+TGG + chr1_3:41829026-41829045 Msa0118690:intron 30.0%
!!! TATAATTTTCAAGTGTGGGA+GGG - chr1_3:41829401-41829420 None:intergenic 30.0%
!!! TTATAATTTTCAAGTGTGGG+AGG - chr1_3:41829402-41829421 None:intergenic 30.0%
! CATAACATATGTATTTTCCC+AGG - chr1_3:41829468-41829487 None:intergenic 30.0%
CTGGGAAAATACATATGTTA+TGG + chr1_3:41829466-41829485 Msa0118690:intron 30.0%
AAGAAATGTATTGTACTCTG+TGG + chr1_3:41829765-41829784 Msa0118690:CDS 30.0%
TTGCAGTAACATGTGTAAAA+TGG + chr1_3:41829796-41829815 Msa0118690:CDS 30.0%
TGCAGTAACATGTGTAAAAT+GGG + chr1_3:41829797-41829816 Msa0118690:CDS 30.0%
CGACAAAAATACTGAGAATT+TGG - chr1_3:41829868-41829887 None:intergenic 30.0%
! CATGGGTTAAAATCAGTAAA+TGG - chr1_3:41830118-41830137 None:intergenic 30.0%
CTCTAAACTAGGATAAACAT+GGG - chr1_3:41830135-41830154 None:intergenic 30.0%
TCTCTAAACTAGGATAAACA+TGG - chr1_3:41830136-41830155 None:intergenic 30.0%
AGATCTGTAATCTCTAAACT+AGG - chr1_3:41830146-41830165 None:intergenic 30.0%
CAAAAACCCAAGTAGTAATA+TGG - chr1_3:41830269-41830288 None:intergenic 30.0%
! TTGACTATGTTGTTTGTTAC+AGG + chr1_3:41830286-41830305 Msa0118690:intron 30.0%
! TCATTTAAAAATGGGTTTCC+TGG + chr1_3:41830543-41830562 Msa0118690:intron 30.0%
! AAGAGTTTGTTTATCATACC+AGG - chr1_3:41830564-41830583 None:intergenic 30.0%
!!! TTTTGTTGTTCATGTGTACA+AGG + chr1_3:41830582-41830601 Msa0118690:intron 30.0%
!! TTTGTTGTTCATGTGTACAA+GGG + chr1_3:41830583-41830602 Msa0118690:intron 30.0%
CAACCTAATACCTAATAAGA+TGG + chr1_3:41830674-41830693 Msa0118690:intron 30.0%
CTTCCATCTTATTAGGTATT+AGG - chr1_3:41830680-41830699 None:intergenic 30.0%
CTAATACCTAATAAGATGGA+AGG + chr1_3:41830678-41830697 Msa0118690:intron 30.0%
CAGGTTAAACACCTAATAAA+TGG - chr1_3:41830740-41830759 None:intergenic 30.0%
TAGATATTGATCATCATACC+AGG - chr1_3:41830846-41830865 None:intergenic 30.0%
GATGACATCACTAATAAAAC+AGG - chr1_3:41830967-41830986 None:intergenic 30.0%
!!! TGGTATTTATTTTAGGGACA+TGG + chr1_3:41831044-41831063 Msa0118690:intron 30.0%
!!! GGTATTTATTTTAGGGACAT+GGG + chr1_3:41831045-41831064 Msa0118690:intron 30.0%
GTCATTAAATTCCAGATATG+TGG - chr1_3:41831274-41831293 None:intergenic 30.0%
!! GTCTTGCTGATTCAAATATT+AGG - chr1_3:41831573-41831592 None:intergenic 30.0%
ACATACTACACTTCAAAAAC+TGG - chr1_3:41831683-41831702 None:intergenic 30.0%
! TATCATAATGTCTTTTGCTC+GGG + chr1_3:41831813-41831832 Msa0118690:intron 30.0%
!! AACACATTGATTCAATACAC+TGG - chr1_3:41831942-41831961 None:intergenic 30.0%
ATTATAAGGAGTTGGATACA+TGG - chr1_3:41832009-41832028 None:intergenic 30.0%
TGTATCCAACTCCTTATAAT+AGG + chr1_3:41832009-41832028 Msa0118690:intron 30.0%
CAACTCCTTATAATAGGATT+CGG + chr1_3:41832015-41832034 Msa0118690:intron 30.0%
GGAAAATATAATCTTAACGG+AGG - chr1_3:41832240-41832259 None:intergenic 30.0%
ATGCACAATAAACAACCAAA+AGG - chr1_3:41832320-41832339 None:intergenic 30.0%
TGGTATTAGTAAAACAGAGA+TGG - chr1_3:41832431-41832450 None:intergenic 30.0%
ATGATTTCACAATGTTCCTT+TGG + chr1_3:41832538-41832557 Msa0118690:CDS 30.0%
TGATTTCACAATGTTCCTTT+GGG + chr1_3:41832539-41832558 Msa0118690:CDS 30.0%
TCATTGGCATATTGTGAAAT+TGG - chr1_3:41832632-41832651 None:intergenic 30.0%
AGTTTGTGTTGCACATAAAA+TGG + chr1_3:41832779-41832798 Msa0118690:intron 30.0%
AAATCTGTGAAGATATGGAA+TGG + chr1_3:41833072-41833091 Msa0118690:CDS 30.0%
TTAAACCTTATCTGGTAAAC+AGG - chr1_3:41833141-41833160 None:intergenic 30.0%
! GATAGTAGACTTCTTTTAAG+TGG + chr1_3:41833293-41833312 Msa0118690:CDS 30.0%
TGAAAATCAAACACACTGAA+AGG - chr1_3:41833444-41833463 None:intergenic 30.0%
!! TTCAGTGTGTTTGATTTTCA+AGG + chr1_3:41833444-41833463 Msa0118690:intron 30.0%
!! TGTGTTTGATTTTCAAGGTT+TGG + chr1_3:41833449-41833468 Msa0118690:intron 30.0%
!! GTGTTTGATTTTCAAGGTTT+GGG + chr1_3:41833450-41833469 Msa0118690:intron 30.0%
!! TTTTCAAGGTTTGGGATATT+CGG + chr1_3:41833458-41833477 Msa0118690:intron 30.0%
! CTGATGAAGTATGTTTGTTA+GGG + chr1_3:41833515-41833534 Msa0118690:intron 30.0%
!! AGGATAAAGTGTTGAAATTG+TGG + chr1_3:41833667-41833686 Msa0118690:CDS 30.0%
!! TAAAGTGTTGAAATTGTGGA+TGG + chr1_3:41833671-41833690 Msa0118690:CDS 30.0%
!! AAAGTGTTGAAATTGTGGAT+GGG + chr1_3:41833672-41833691 Msa0118690:CDS 30.0%
TACCATTGCATTGAAATCAA+TGG + chr1_3:41833763-41833782 Msa0118690:three_prime_UTR 30.0%
! TTGTTTCTTAAGGACAACTA+TGG + chr1_3:41833997-41834016 Msa0118690:three_prime_UTR 30.0%
TGTGTATATGGGGTTTATTG+AGG - chr1_3:41826261-41826280 None:intergenic 35.0%
! TAGAGTGTCTGTGTGTATAT+GGG - chr1_3:41826272-41826291 None:intergenic 35.0%
! TTAGAGTGTCTGTGTGTATA+TGG - chr1_3:41826273-41826292 None:intergenic 35.0%
GAACAAAGAGGAACGAAAAA+TGG + chr1_3:41826355-41826374 Msa0118690:exon 35.0%
! ATATTCTGAGGAAGGTACAT+AGG - chr1_3:41826485-41826504 None:intergenic 35.0%
ATGTACCTTCCTCAGAATAT+TGG + chr1_3:41826485-41826504 Msa0118690:CDS 35.0%
! TCGTCTGTTATTCATTTTCG+CGG + chr1_3:41826588-41826607 Msa0118690:intron 35.0%
!! TCATCGGATTAGTCTATTCT+TGG + chr1_3:41826638-41826657 Msa0118690:intron 35.0%
ACATGGTTAATTATGTTCGG+TGG + chr1_3:41826779-41826798 Msa0118690:intron 35.0%
CACAGCTCAATAATCATTCA+CGG + chr1_3:41826827-41826846 Msa0118690:intron 35.0%
TCTGTCTGTTGTCTCAATTT+AGG + chr1_3:41827297-41827316 Msa0118690:intron 35.0%
! TTTTGCAGGTATGTTTCAAG+TGG - chr1_3:41827373-41827392 None:intergenic 35.0%
ACATACCTGCAAAAACACAA+AGG + chr1_3:41827379-41827398 Msa0118690:CDS 35.0%
!! ACTAACCTTTGTGTTTTTGC+AGG - chr1_3:41827387-41827406 None:intergenic 35.0%
TTACATCATTTCAGTCTCTG+TGG + chr1_3:41827501-41827520 Msa0118690:intron 35.0%
! TGATACCACTGTTCGATTTT+GGG + chr1_3:41827870-41827889 Msa0118690:CDS 35.0%
TCTGATAGATGCCTATTATC+GGG + chr1_3:41828131-41828150 Msa0118690:intron 35.0%
GAAGAAACGAGAACATAAGA+GGG + chr1_3:41828290-41828309 Msa0118690:intron 35.0%
CAATTTCTGAGCGAGTATAT+TGG + chr1_3:41828336-41828355 Msa0118690:intron 35.0%
AATAAAGCTCCTAAAACCAG+AGG - chr1_3:41828421-41828440 None:intergenic 35.0%
TGCACTCTTAGGTATCTTTA+AGG + chr1_3:41828660-41828679 Msa0118690:intron 35.0%
ATGGCAAGTATCTTGTTAGT+GGG + chr1_3:41828759-41828778 Msa0118690:CDS 35.0%
TGTCAGGAGAACTTATATGT+TGG + chr1_3:41828786-41828805 Msa0118690:CDS 35.0%
GTCAGGAGAACTTATATGTT+GGG + chr1_3:41828787-41828806 Msa0118690:CDS 35.0%
CTAATTGCTTTCCAGTTTGT+GGG - chr1_3:41828814-41828833 None:intergenic 35.0%
! GATTGCAACTGAAATTTTGG+AGG + chr1_3:41829029-41829048 Msa0118690:intron 35.0%
TACCAGTAATCCATTTCTTG+TGG - chr1_3:41829653-41829672 None:intergenic 35.0%
!! AATGGATTACTGGTATCTCT+TGG + chr1_3:41829658-41829677 Msa0118690:CDS 35.0%
! ATGGATTACTGGTATCTCTT+GGG + chr1_3:41829659-41829678 Msa0118690:CDS 35.0%
GCAGTAACATGTGTAAAATG+GGG + chr1_3:41829798-41829817 Msa0118690:CDS 35.0%
GAGATGGTGTGATTTATACT+GGG + chr1_3:41829823-41829842 Msa0118690:CDS 35.0%
ATACTGAGAATTTGGAAGGA+AGG - chr1_3:41829860-41829879 None:intergenic 35.0%
ATTCAACTAATCCTGGTGTT+TGG + chr1_3:41830182-41830201 Msa0118690:intron 35.0%
AACTTTGATTGTACAGTCCT+GGG - chr1_3:41830313-41830332 None:intergenic 35.0%
AAACTTTGATTGTACAGTCC+TGG - chr1_3:41830314-41830333 None:intergenic 35.0%
AGGACTGTACAATCAAAGTT+TGG + chr1_3:41830313-41830332 Msa0118690:CDS 35.0%
GGACTGTACAATCAAAGTTT+GGG + chr1_3:41830314-41830333 Msa0118690:CDS 35.0%
AATCAAAGTTTGGGAAACCA+CGG + chr1_3:41830323-41830342 Msa0118690:CDS 35.0%
AAGGTTCCTTCCATCTTATT+AGG - chr1_3:41830687-41830706 None:intergenic 35.0%
ATCTCCAGATGAAATGAAGA+AGG + chr1_3:41831148-41831167 Msa0118690:CDS 35.0%
GTTACCTTCTTCATTTCATC+TGG - chr1_3:41831155-41831174 None:intergenic 35.0%
CCTAACAACTACTGTTCAAA+GGG - chr1_3:41831205-41831224 None:intergenic 35.0%
ACCTAACAACTACTGTTCAA+AGG - chr1_3:41831206-41831225 None:intergenic 35.0%
GTAGTTGTTAGGTACAAAAC+CGG + chr1_3:41831213-41831232 Msa0118690:intron 35.0%
TAGTTGTTAGGTACAAAACC+GGG + chr1_3:41831214-41831233 Msa0118690:intron 35.0%
CAATAATTAGCCCACATATC+TGG + chr1_3:41831260-41831279 Msa0118690:intron 35.0%
! CTGCATTAGTTTCAACATAC+AGG + chr1_3:41831340-41831359 Msa0118690:intron 35.0%
AATTTAGCTGTAGTGCTAAC+AGG + chr1_3:41831412-41831431 Msa0118690:intron 35.0%
ATTAATCTGTCTGCTAGATC+AGG - chr1_3:41831660-41831679 None:intergenic 35.0%
CGAATCCTATTATAAGGAGT+TGG - chr1_3:41832017-41832036 None:intergenic 35.0%
GAAAGCCGAATCCTATTATA+AGG - chr1_3:41832023-41832042 None:intergenic 35.0%
TCTGCTTTATACCTTCCTAA+CGG + chr1_3:41832156-41832175 Msa0118690:intron 35.0%
CCAAAATAATTTCAGAGGCA+AGG - chr1_3:41832261-41832280 None:intergenic 35.0%
!!! CCTTGCCTCTGAAATTATTT+TGG + chr1_3:41832258-41832277 Msa0118690:intron 35.0%
ATGGAAGTAGTTCCTACATA+AGG - chr1_3:41832412-41832431 None:intergenic 35.0%
TTTATGCTGCTGATGTATGT+AGG + chr1_3:41832452-41832471 Msa0118690:intron 35.0%
GACTCATGTTAAACCTTATC+TGG - chr1_3:41833149-41833168 None:intergenic 35.0%
!! TTGGCTAGCATTTGATTTGT+GGG - chr1_3:41833213-41833232 None:intergenic 35.0%
!! TTTGGCTAGCATTTGATTTG+TGG - chr1_3:41833214-41833233 None:intergenic 35.0%
TAGCAAAGATTCTACACTCA+AGG + chr1_3:41833316-41833335 Msa0118690:CDS 35.0%
ACAAACATACTTCATCAGCA+TGG - chr1_3:41833513-41833532 None:intergenic 35.0%
GCTGATGAAGTATGTTTGTT+AGG + chr1_3:41833514-41833533 Msa0118690:intron 35.0%
! TGTAGGTGTTTTCTGTTGAT+TGG + chr1_3:41833610-41833629 Msa0118690:intron 35.0%
AATGCAATGGTAACAGCATA+TGG - chr1_3:41833755-41833774 None:intergenic 35.0%
!! AGCCATTGATTTCAATGCAA+TGG - chr1_3:41833768-41833787 None:intergenic 35.0%
ACTACATAGCCATTGAGATT+AGG + chr1_3:41833828-41833847 Msa0118690:three_prime_UTR 35.0%
GGCAAACAAAAACCATCTTA+TGG - chr1_3:41834070-41834089 None:intergenic 35.0%
TAGTAGTGTCAGTCTTTGAA+TGG + chr1_3:41834097-41834116 Msa0118690:three_prime_UTR 35.0%
ATGAGGAGGAAGAGGAATTA+GGG - chr1_3:41826216-41826235 None:intergenic 40.0%
AATGAGGAGGAAGAGGAATT+AGG - chr1_3:41826217-41826236 None:intergenic 40.0%
! AGAGTGTCTGTGTGTATATG+GGG - chr1_3:41826271-41826290 None:intergenic 40.0%
TGTCTATTGACAGACCAAGA+TGG + chr1_3:41826443-41826462 Msa0118690:CDS 40.0%
TGTTGAGGACCAATATTCTG+AGG - chr1_3:41826497-41826516 None:intergenic 40.0%
! CGTCTGTTATTCATTTTCGC+GGG + chr1_3:41826589-41826608 Msa0118690:intron 40.0%
!! GGATTAGTCTATTCTTGGAC+CGG + chr1_3:41826643-41826662 Msa0118690:intron 40.0%
! GTTCAGTTCAGTGTTGTTGA+TGG + chr1_3:41826963-41826982 Msa0118690:intron 40.0%
GCCACCATCTTTCACAAAAT+TGG + chr1_3:41826998-41827017 Msa0118690:intron 40.0%
! GCCAATTTTGTGAAAGATGG+TGG - chr1_3:41827002-41827021 None:intergenic 40.0%
! GTGGCCAATTTTGTGAAAGA+TGG - chr1_3:41827005-41827024 None:intergenic 40.0%
!!! GGTTTTTTGGGTTTTCGATG+TGG - chr1_3:41827024-41827043 None:intergenic 40.0%
AAAACCCAAAAAACCACCAC+TGG + chr1_3:41827029-41827048 Msa0118690:intron 40.0%
!!! GATACCAGTGGTGGTTTTTT+GGG - chr1_3:41827036-41827055 None:intergenic 40.0%
!!! AGATACCAGTGGTGGTTTTT+TGG - chr1_3:41827037-41827056 None:intergenic 40.0%
TTATCAAACATCAGCCATGG+TGG - chr1_3:41827069-41827088 None:intergenic 40.0%
GTCTGTTGTCTCAATTTAGG+AGG + chr1_3:41827300-41827319 Msa0118690:intron 40.0%
GCTTGAGGTTGACAAACTAT+AGG - chr1_3:41827538-41827557 None:intergenic 40.0%
!! CTTTGGAATTAATGTCGTCG+AGG + chr1_3:41827770-41827789 Msa0118690:intron 40.0%
ATGTCGTCGAGGTTATTTGT+AGG + chr1_3:41827781-41827800 Msa0118690:intron 40.0%
TCGAGGTTATTTGTAGGTCA+TGG + chr1_3:41827787-41827806 Msa0118690:intron 40.0%
! GTGATACCACTGTTCGATTT+TGG + chr1_3:41827869-41827888 Msa0118690:CDS 40.0%
AAGATCCCAAAATCGAACAG+TGG - chr1_3:41827878-41827897 None:intergenic 40.0%
!!! ACTGTTCGATTTTGGGATCT+TGG + chr1_3:41827877-41827896 Msa0118690:CDS 40.0%
AAACCTGTGCATGTGTACAT+TGG - chr1_3:41827913-41827932 None:intergenic 40.0%
GAATCGTTTGATTGTGCTCA+CGG + chr1_3:41828058-41828077 Msa0118690:intron 40.0%
CTGATAGATGCCTATTATCG+GGG + chr1_3:41828132-41828151 Msa0118690:intron 40.0%
TGATAGATGCCTATTATCGG+GGG + chr1_3:41828133-41828152 Msa0118690:intron 40.0%
GTTATTCACACTGTTGAGTG+TGG + chr1_3:41828212-41828231 Msa0118690:intron 40.0%
GGAAGAAACGAGAACATAAG+AGG + chr1_3:41828289-41828308 Msa0118690:intron 40.0%
AAACGAGAACATAAGAGGGA+AGG + chr1_3:41828294-41828313 Msa0118690:intron 40.0%
TTTCTGAGCGAGTATATTGG+AGG + chr1_3:41828339-41828358 Msa0118690:intron 40.0%
TTCTGAGCGAGTATATTGGA+GGG + chr1_3:41828340-41828359 Msa0118690:intron 40.0%
GATTTACAGAGGTTTACCTC+TGG + chr1_3:41828402-41828421 Msa0118690:intron 40.0%
!!! AGAGGTTTACCTCTGGTTTT+AGG + chr1_3:41828409-41828428 Msa0118690:intron 40.0%
TACAGTTGTTCCTTGATACG+AGG + chr1_3:41828487-41828506 Msa0118690:intron 40.0%
TAATAAGTGGCCTCGTATCA+AGG - chr1_3:41828500-41828519 None:intergenic 40.0%
GCAAAAGAGATGCTAACAAC+TGG - chr1_3:41828572-41828591 None:intergenic 40.0%
ACTGGGTACTTTGTATTGCA+TGG + chr1_3:41828729-41828748 Msa0118690:CDS 40.0%
CTAACAAGATACTTGCCATC+TGG - chr1_3:41828758-41828777 None:intergenic 40.0%
GATGGCAAGTATCTTGTTAG+TGG + chr1_3:41828758-41828777 Msa0118690:CDS 40.0%
CCTAATTGCTTTCCAGTTTG+TGG - chr1_3:41828815-41828834 None:intergenic 40.0%
CCACAAACTGGAAAGCAATT+AGG + chr1_3:41828812-41828831 Msa0118690:CDS 40.0%
ATTGTCAGTATAGTCGATGG+TGG + chr1_3:41828974-41828993 Msa0118690:intron 40.0%
!! TGCAACTGAAATTTTGGAGG+AGG + chr1_3:41829032-41829051 Msa0118690:intron 40.0%
TCTCTGCAAGTGATTCTTCA+AGG - chr1_3:41829267-41829286 None:intergenic 40.0%
AATTGTAGGGCCACAAGAAA+TGG + chr1_3:41829640-41829659 Msa0118690:intron 40.0%
TTTGTAAGTGCCAGCAAAGA+TGG + chr1_3:41829714-41829733 Msa0118690:CDS 40.0%
TTGTAAGTGCCAGCAAAGAT+GGG + chr1_3:41829715-41829734 Msa0118690:CDS 40.0%
GTAACATGTGTAAAATGGGG+TGG + chr1_3:41829801-41829820 Msa0118690:CDS 40.0%
GGAGATGGTGTGATTTATAC+TGG + chr1_3:41829822-41829841 Msa0118690:CDS 40.0%
! GAGTTTTTACTTCCCACAGA+GGG - chr1_3:41830081-41830100 None:intergenic 40.0%
! TGAGTTTTTACTTCCCACAG+AGG - chr1_3:41830082-41830101 None:intergenic 40.0%
! GTGTTTGGTGATAGTATGCA+GGG + chr1_3:41830197-41830216 Msa0118690:intron 40.0%
! TGTTTGGTGATAGTATGCAG+GGG + chr1_3:41830198-41830217 Msa0118690:intron 40.0%
!! TATTTTAGGGACATGGGCAT+TGG + chr1_3:41831051-41831070 Msa0118690:intron 40.0%
!! ATTTTAGGGACATGGGCATT+GGG + chr1_3:41831052-41831071 Msa0118690:intron 40.0%
CCCTTTGAACAGTAGTTGTT+AGG + chr1_3:41831202-41831221 Msa0118690:intron 40.0%
TAATTATTGCTGATCTGGCC+AGG - chr1_3:41831249-41831268 None:intergenic 40.0%
TGGGCTAATTATTGCTGATC+TGG - chr1_3:41831254-41831273 None:intergenic 40.0%
AAGAAATATTCGGGGATCGA+AGG + chr1_3:41831376-41831395 Msa0118690:intron 40.0%
ATTGATAAAGCCCAGTGACA+TGG + chr1_3:41831977-41831996 Msa0118690:intron 40.0%
TCTAAGAACAATGCATGCCA+TGG - chr1_3:41832193-41832212 None:intergenic 40.0%
CATACATCAGCAGCATAAAC+TGG - chr1_3:41832451-41832470 None:intergenic 40.0%
ATCCAGAGACCAATCTTTCA+GGG - chr1_3:41832515-41832534 None:intergenic 40.0%
!! CATGTCTATTTTTCGCCTGA+CGG + chr1_3:41833021-41833040 Msa0118690:CDS 40.0%
!! ATGTCTATTTTTCGCCTGAC+GGG + chr1_3:41833022-41833041 Msa0118690:CDS 40.0%
AAGATATGGAATGGCACTAC+AGG + chr1_3:41833081-41833100 Msa0118690:CDS 40.0%
AGATATGGAATGGCACTACA+GGG + chr1_3:41833082-41833101 Msa0118690:CDS 40.0%
!! GTTGACTTTTTCTCTACAGC+TGG + chr1_3:41833264-41833283 Msa0118690:intron 40.0%
AAAGTTGAAGCAAGACCTTC+CGG + chr1_3:41833486-41833505 Msa0118690:CDS 40.0%
GTTGAAATTGTGGATGGGAT+AGG + chr1_3:41833677-41833696 Msa0118690:CDS 40.0%
ATCAATGGCTGACTATTGTG+TGG + chr1_3:41833778-41833797 Msa0118690:three_prime_UTR 40.0%
CTCAATGGCTATGTAGTATG+TGG - chr1_3:41833825-41833844 None:intergenic 40.0%
! TCTAAGCAACTTGTTCTTCC+AGG - chr1_3:41833854-41833873 None:intergenic 40.0%
AGTTGCTTAGATTGAGTCTC+AGG + chr1_3:41833863-41833882 Msa0118690:three_prime_UTR 40.0%
AAGCTGCTTGAATTGCTTGA+GGG + chr1_3:41833891-41833910 Msa0118690:three_prime_UTR 40.0%
TAATGAACTCTGAGTGTGCA+AGG + chr1_3:41834039-41834058 Msa0118690:three_prime_UTR 40.0%
AATGAACTCTGAGTGTGCAA+GGG + chr1_3:41834040-41834059 Msa0118690:three_prime_UTR 40.0%
GACTGACACTACTAGTATCA+AGG - chr1_3:41834091-41834110 None:intergenic 40.0%
TTCGTGAAATGAGGAGGAAG+AGG - chr1_3:41826224-41826243 None:intergenic 45.0%
CTATTGACAGACCAAGATGG+TGG + chr1_3:41826446-41826465 Msa0118690:CDS 45.0%
!! AGGTACATAGGAGCACCAAT+AGG - chr1_3:41826473-41826492 None:intergenic 45.0%
! GAGGACCAATATTCTGAGGA+AGG - chr1_3:41826493-41826512 None:intergenic 45.0%
! ACGATGAGTTGAAGCTGTTG+AGG - chr1_3:41826512-41826531 None:intergenic 45.0%
! GGACGGTAGAATTGGTTCAT+CGG + chr1_3:41826622-41826641 Msa0118690:intron 45.0%
GTCTATTCTTGGACCGGATA+CGG + chr1_3:41826649-41826668 Msa0118690:intron 45.0%
ACACAAGTAACCTCCGTATC+CGG - chr1_3:41826665-41826684 None:intergenic 45.0%
AACATTGCAGATACCAGTGG+TGG - chr1_3:41827045-41827064 None:intergenic 45.0%
TATCTGCAATGTTGCCACCA+TGG + chr1_3:41827052-41827071 Msa0118690:intron 45.0%
CATTTCAGTCTCTGTGGAGA+AGG + chr1_3:41827507-41827526 Msa0118690:intron 45.0%
!! GTCAACCTCAAGCTGTTTTC+CGG + chr1_3:41827545-41827564 Msa0118690:CDS 45.0%
! ATCGATTCACAGGACGAATC+CGG - chr1_3:41827567-41827586 None:intergenic 45.0%
CGATGTTCTGCGACAATTTC+TGG + chr1_3:41827583-41827602 Msa0118690:CDS 45.0%
AGTGTTGCCTTTAGTCCTGA+TGG + chr1_3:41827823-41827842 Msa0118690:CDS 45.0%
GTGTTGCCTTTAGTCCTGAT+GGG + chr1_3:41827824-41827843 Msa0118690:CDS 45.0%
ACACCAATGTACACATGCAC+AGG + chr1_3:41827907-41827926 Msa0118690:CDS 45.0%
TGTTTGGCAGGCATGAAGAA+AGG - chr1_3:41827955-41827974 None:intergenic 45.0%
CATAGCATACCCCCGATAAT+AGG - chr1_3:41828145-41828164 None:intergenic 45.0%
! ATTATCGGGGGTATGCTATG+AGG + chr1_3:41828145-41828164 Msa0118690:intron 45.0%
TATGCTATGAGGAAAGGGGT+GGG + chr1_3:41828156-41828175 Msa0118690:intron 45.0%
GGAAGTAGAGGATCAACACA+AGG + chr1_3:41828177-41828196 Msa0118690:intron 45.0%
AGCATAACTGTATGCTGAGC+TGG + chr1_3:41828235-41828254 Msa0118690:intron 45.0%
TGGGAGGTGGAAATTACGTT+AGG + chr1_3:41828268-41828287 Msa0118690:intron 45.0%
TTTATGCAGGGCACAAGAAC+TGG + chr1_3:41828711-41828730 Msa0118690:intron 45.0%
TTATGCAGGGCACAAGAACT+GGG + chr1_3:41828712-41828731 Msa0118690:intron 45.0%
TGTATTGCATGGTCACCAGA+TGG + chr1_3:41828740-41828759 Msa0118690:CDS 45.0%
ATATGTTGGGACCCACAAAC+TGG + chr1_3:41828800-41828819 Msa0118690:CDS 45.0%
GCGTTGAGAACAGCCAATTA+AGG + chr1_3:41828926-41828945 Msa0118690:intron 45.0%
AGCAACAGAACATTGGTGCA+GGG + chr1_3:41829309-41829328 Msa0118690:intron 45.0%
!! GGCCACAAGAAATGGATTAC+TGG + chr1_3:41829648-41829667 Msa0118690:CDS 45.0%
!! CAAGGAGCATTCAAATGGAC+AGG - chr1_3:41829687-41829706 None:intergenic 45.0%
TGTAAGTGCCAGCAAAGATG+GGG + chr1_3:41829716-41829735 Msa0118690:CDS 45.0%
AAGATGGGGATGCTCGTATA+TGG + chr1_3:41829730-41829749 Msa0118690:CDS 45.0%
AGATGGGGATGCTCGTATAT+GGG + chr1_3:41829731-41829750 Msa0118690:CDS 45.0%
CACATGTTACTGCAAGTGTG+TGG - chr1_3:41829791-41829810 None:intergenic 45.0%
TGTGTAAAATGGGGTGGAGA+TGG + chr1_3:41829807-41829826 Msa0118690:CDS 45.0%
TTATTCCTGCATACCCTCTG+TGG + chr1_3:41830065-41830084 Msa0118690:intron 45.0%
TATTCCTGCATACCCTCTGT+GGG + chr1_3:41830066-41830085 Msa0118690:intron 45.0%
GCATACTATCACCAAACACC+AGG - chr1_3:41830196-41830215 None:intergenic 45.0%
! GGTGTTTGGTGATAGTATGC+AGG + chr1_3:41830196-41830215 Msa0118690:intron 45.0%
! TGTTGTTTGTTACAGGTCCC+AGG + chr1_3:41830293-41830312 Msa0118690:intron 45.0%
AAAGTTTGGGAAACCACGGA+AGG + chr1_3:41830327-41830346 Msa0118690:CDS 45.0%
AAGTTTGGGAAACCACGGAA+GGG + chr1_3:41830328-41830347 Msa0118690:CDS 45.0%
GAAGCTAATTCGGGAACTGA+AGG + chr1_3:41830350-41830369 Msa0118690:CDS 45.0%
CTAATTCGGGAACTGAAGGT+AGG + chr1_3:41830354-41830373 Msa0118690:intron 45.0%
GTTGTTCATGTGTACAAGGG+TGG + chr1_3:41830586-41830605 Msa0118690:intron 45.0%
TTCATGTGTACAAGGGTGGA+TGG + chr1_3:41830590-41830609 Msa0118690:intron 45.0%
! GGTGGATGGTAGTGTGAAAA+AGG + chr1_3:41830604-41830623 Msa0118690:intron 45.0%
ACTGAGTATGTTCTTCGCAC+CGG + chr1_3:41831095-41831114 Msa0118690:CDS 45.0%
! ACCGGAGCTTTTGATCATAC+TGG + chr1_3:41831113-41831132 Msa0118690:CDS 45.0%
CCCAGTATGATCAAAAGCTC+CGG - chr1_3:41831117-41831136 None:intergenic 45.0%
! CCGGAGCTTTTGATCATACT+GGG + chr1_3:41831114-41831133 Msa0118690:CDS 45.0%
! TTGAGCTGGTTTCAGTCACA+AGG - chr1_3:41831317-41831336 None:intergenic 45.0%
TTGTGACTGAAACCAGCTCA+AGG + chr1_3:41831316-41831335 Msa0118690:intron 45.0%
AACTAATGCAGTCCTTGAGC+TGG - chr1_3:41831331-41831350 None:intergenic 45.0%
GGGATCGAAGGACTTCATAA+TGG + chr1_3:41831388-41831407 Msa0118690:intron 45.0%
ATGGACAGAACCATGTCACT+GGG - chr1_3:41831990-41832009 None:intergenic 45.0%
GCTTTATACCTTCCTAACGG+TGG + chr1_3:41832159-41832178 Msa0118690:intron 45.0%
GCTTCGCAAGTTCCTTATGT+AGG + chr1_3:41832397-41832416 Msa0118690:intron 45.0%
GTATGTAGGTCGCTCTTGAA+AGG + chr1_3:41832466-41832485 Msa0118690:intron 45.0%
! GAAAGGTACAACACAACGAG+AGG + chr1_3:41832483-41832502 Msa0118690:CDS 45.0%
TCCAGAGACCAATCTTTCAG+GGG - chr1_3:41832514-41832533 None:intergenic 45.0%
GATCCAGAGACCAATCTTTC+AGG - chr1_3:41832516-41832535 None:intergenic 45.0%
! TGTTGATGAAGGGTTCCCAA+AGG - chr1_3:41832557-41832576 None:intergenic 45.0%
! TTGGGGTGCTTGTTGATGAA+GGG - chr1_3:41832567-41832586 None:intergenic 45.0%
! TTTGGGGTGCTTGTTGATGA+AGG - chr1_3:41832568-41832587 None:intergenic 45.0%
! TGACCTGTCATGCGAGTTTT+GGG - chr1_3:41832585-41832604 None:intergenic 45.0%
! ATGACCTGTCATGCGAGTTT+TGG - chr1_3:41832586-41832605 None:intergenic 45.0%
CGTCAGGCGAAAAATAGACA+TGG - chr1_3:41833023-41833042 None:intergenic 45.0%
AAATTTGTCACTGCCTTCCG+TGG + chr1_3:41833105-41833124 Msa0118690:CDS 45.0%
TTGGGCCTGTTTACCAGATA+AGG + chr1_3:41833133-41833152 Msa0118690:CDS 45.0%
AAGTTGAAGCAAGACCTTCC+GGG + chr1_3:41833487-41833506 Msa0118690:CDS 45.0%
ACTCTAGTCAGCCACAAGAA+TGG - chr1_3:41833576-41833595 None:intergenic 45.0%
! TCTGTTGATTGGAGTCCAGA+TGG + chr1_3:41833621-41833640 Msa0118690:CDS 45.0%
!!! GGATGGGATAGGCTACTTTT+TGG + chr1_3:41833688-41833707 Msa0118690:exon 45.0%
ATAGCCATTGAGATTAGGCC+TGG + chr1_3:41833833-41833852 Msa0118690:three_prime_UTR 45.0%
TCTTCCAGGCCTAATCTCAA+TGG - chr1_3:41833840-41833859 None:intergenic 45.0%
GAAGCTGCTTGAATTGCTTG+AGG + chr1_3:41833890-41833909 Msa0118690:three_prime_UTR 45.0%
!!! TTTTAATTAAATTAATAATG+TGG + chr1_3:41831869-41831888 Msa0118690:intron 5.0%
CTGTGCTTCGTGAAATGAGG+AGG - chr1_3:41826230-41826249 None:intergenic 50.0%
CTCCTCATTTCACGAAGCAC+AGG + chr1_3:41826228-41826247 Msa0118690:five_prime_UTR 50.0%
GTCCTGTGCTTCGTGAAATG+AGG - chr1_3:41826233-41826252 None:intergenic 50.0%
GGAGATTGACACAGTGACAG+AGG + chr1_3:41826376-41826395 Msa0118690:CDS 50.0%
GATTGACACAGTGACAGAGG+CGG + chr1_3:41826379-41826398 Msa0118690:CDS 50.0%
! GACCAAGATGGTGGTCCTAT+TGG + chr1_3:41826455-41826474 Msa0118690:CDS 50.0%
CACCAATAGGACCACCATCT+TGG - chr1_3:41826460-41826479 None:intergenic 50.0%
AATTCTACCGTCCACTAGCG+GGG - chr1_3:41826615-41826634 None:intergenic 50.0%
CAATTCTACCGTCCACTAGC+GGG - chr1_3:41826616-41826635 None:intergenic 50.0%
CCAATTCTACCGTCCACTAG+CGG - chr1_3:41826617-41826636 None:intergenic 50.0%
TATTCTTGGACCGGATACGG+AGG + chr1_3:41826652-41826671 Msa0118690:intron 50.0%
!! TGTTGTTGATGGCCGACATC+TGG + chr1_3:41826974-41826993 Msa0118690:intron 50.0%
GGCAACATTGCAGATACCAG+TGG - chr1_3:41827048-41827067 None:intergenic 50.0%
CGAATCCGGAAAACAGCTTG+AGG - chr1_3:41827553-41827572 None:intergenic 50.0%
!! GTCGCAGAACATCGATTCAC+AGG - chr1_3:41827577-41827596 None:intergenic 50.0%
TTGCCTTTAGTCCTGATGGG+CGG + chr1_3:41827827-41827846 Msa0118690:CDS 50.0%
! GGGGGTATGCTATGAGGAAA+GGG + chr1_3:41828151-41828170 Msa0118690:intron 50.0%
GGGGTATGCTATGAGGAAAG+GGG + chr1_3:41828152-41828171 Msa0118690:intron 50.0%
GTATGCTATGAGGAAAGGGG+TGG + chr1_3:41828155-41828174 Msa0118690:intron 50.0%
AACTGTATGCTGAGCTGGCA+AGG + chr1_3:41828240-41828259 Msa0118690:intron 50.0%
CTGAGCTGGCAAGGAAAAGT+GGG + chr1_3:41828249-41828268 Msa0118690:intron 50.0%
TGAGCGAGTATATTGGAGGG+AGG + chr1_3:41828343-41828362 Msa0118690:intron 50.0%
TTGGAGGGAGGATTTCTGAC+TGG + chr1_3:41828355-41828374 Msa0118690:intron 50.0%
! CTTGTTAGTGGGAGCATGTC+AGG + chr1_3:41828770-41828789 Msa0118690:CDS 50.0%
AGAGGCGAGCAACAGAACAT+TGG + chr1_3:41829302-41829321 Msa0118690:intron 50.0%
GAGCAACAGAACATTGGTGC+AGG + chr1_3:41829308-41829327 Msa0118690:intron 50.0%
GCAACAGAACATTGGTGCAG+GGG + chr1_3:41829310-41829329 Msa0118690:intron 50.0%
!! GACGGCAAGGAGCATTCAAA+TGG - chr1_3:41829692-41829711 None:intergenic 50.0%
TGCTGGCACTTACAAAGCGA+CGG - chr1_3:41829710-41829729 None:intergenic 50.0%
CCACGGAAGGGAAGCTAATT+CGG + chr1_3:41830340-41830359 Msa0118690:CDS 50.0%
CACGGAAGGGAAGCTAATTC+GGG + chr1_3:41830341-41830360 Msa0118690:CDS 50.0%
GTATCAGCGTAGCTGCTAAC+TGG + chr1_3:41830415-41830434 Msa0118690:intron 50.0%
CATGGACAGAACCATGTCAC+TGG - chr1_3:41831991-41832010 None:intergenic 50.0%
TACCTTCCTAACGGTGGAAG+TGG + chr1_3:41832165-41832184 Msa0118690:intron 50.0%
TTCCACTTCCACCGTTAGGA+AGG - chr1_3:41832170-41832189 None:intergenic 50.0%
ATGGTTCCACTTCCACCGTT+AGG - chr1_3:41832174-41832193 None:intergenic 50.0%
TAACGGTGGAAGTGGAACCA+TGG + chr1_3:41832173-41832192 Msa0118690:intron 50.0%
! AGGTACTGCCCCTGAAAGAT+TGG + chr1_3:41832503-41832522 Msa0118690:CDS 50.0%
! GACCTGTCATGCGAGTTTTG+GGG - chr1_3:41832584-41832603 None:intergenic 50.0%
!! ATTTTTCGCCTGACGGGCAA+TGG + chr1_3:41833028-41833047 Msa0118690:CDS 50.0%
AAACAGGCCCAACATGACCA+CGG - chr1_3:41833125-41833144 None:intergenic 50.0%
CATACTTCATCAGCATGGCC+CGG - chr1_3:41833508-41833527 None:intergenic 50.0%
TTGGAGTCCAGATGGAGAGA+AGG + chr1_3:41833629-41833648 Msa0118690:CDS 50.0%
GAAGCTACCTTCTCTCCATC+TGG - chr1_3:41833639-41833658 None:intergenic 50.0%
GATGGAGAGAAGGTAGCTTC+TGG + chr1_3:41833639-41833658 Msa0118690:CDS 50.0%
GAAGGTAGCTTCTGGTGGTA+AGG + chr1_3:41833647-41833666 Msa0118690:CDS 50.0%
!! TGCAAGGGCTAGCCATAAGA+TGG + chr1_3:41834055-41834074 Msa0118690:three_prime_UTR 50.0%
! CCGCTAGTGGACGGTAGAAT+TGG + chr1_3:41826614-41826633 Msa0118690:intron 55.0%
! AAGATGGTGGCGCCAGATGT+CGG - chr1_3:41826989-41827008 None:intergenic 55.0%
! CGGGGGTATGCTATGAGGAA+AGG + chr1_3:41828150-41828169 Msa0118690:intron 55.0%
AGGAAAGGGGTGGGAAGTAG+AGG + chr1_3:41828165-41828184 Msa0118690:intron 55.0%
GCTGAGCTGGCAAGGAAAAG+TGG + chr1_3:41828248-41828267 Msa0118690:intron 55.0%
AGCTGGCAAGGAAAAGTGGG+AGG + chr1_3:41828252-41828271 Msa0118690:intron 55.0%
TGGCAAGGAAAAGTGGGAGG+TGG + chr1_3:41828255-41828274 Msa0118690:intron 55.0%
ACAGAACATTGGTGCAGGGG+TGG + chr1_3:41829313-41829332 Msa0118690:intron 55.0%
GCACTTACAAAGCGACGGCA+AGG - chr1_3:41829705-41829724 None:intergenic 55.0%
ACGAGCATCCCCATCTTTGC+TGG - chr1_3:41829727-41829746 None:intergenic 55.0%
! ACTTCCCACAGAGGGTATGC+AGG - chr1_3:41830073-41830092 None:intergenic 55.0%
! CCGAATTAGCTTCCCTTCCG+TGG - chr1_3:41830343-41830362 None:intergenic 55.0%
GGAACTGAAGGTAGGCCTCA+AGG + chr1_3:41830362-41830381 Msa0118690:intron 55.0%
!! GCCCCTGAAAGATTGGTCTC+TGG + chr1_3:41832510-41832529 Msa0118690:CDS 55.0%
CACCCCAAAACTCGCATGAC+AGG + chr1_3:41832579-41832598 Msa0118690:CDS 55.0%
TCGCATGACAGGTCATCAGC+AGG + chr1_3:41832590-41832609 Msa0118690:CDS 55.0%
ACTGCCTTCCGTGGTCATGT+TGG + chr1_3:41833114-41833133 Msa0118690:CDS 55.0%
CTGCCTTCCGTGGTCATGTT+GGG + chr1_3:41833115-41833134 Msa0118690:CDS 55.0%
GGAGAGAAGGTAGCTTCTGG+TGG + chr1_3:41833642-41833661 Msa0118690:CDS 55.0%
AGTGACAGAGGCGGCAGTAG+TGG + chr1_3:41826388-41826407 Msa0118690:CDS 60.0%
CTGCCGCCCATCAGGACTAA+AGG - chr1_3:41827833-41827852 None:intergenic 60.0%
CGGCAGCTAGCTAGTGGTTC+TGG + chr1_3:41827847-41827866 Msa0118690:CDS 60.0%
AAAACCGGGCCTTCTCTGCC+TGG + chr1_3:41831228-41831247 Msa0118690:intron 60.0%
CTGATCTGGCCAGGCAGAGA+AGG - chr1_3:41831240-41831259 None:intergenic 60.0%
CTCGCTATCCATTGCCCGTC+AGG - chr1_3:41833039-41833058 None:intergenic 60.0%
AGGCCCAACATGACCACGGA+AGG - chr1_3:41833121-41833140 None:intergenic 60.0%
CTTCATCAGCATGGCCCGGA+AGG - chr1_3:41833504-41833523 None:intergenic 60.0%
GACAGAGGCGGCAGTAGTGG+AGG + chr1_3:41826391-41826410 Msa0118690:CDS 65.0%
! ATTTTCGCGGGCCCCGCTAG+TGG + chr1_3:41826601-41826620 Msa0118690:intron 65.0%
CTAGCTAGCTGCCGCCCATC+AGG - chr1_3:41827841-41827860 None:intergenic 65.0%
GATGGGCGGCAGCTAGCTAG+TGG + chr1_3:41827841-41827860 Msa0118690:CDS 65.0%
CTGGCCAGGCAGAGAAGGCC+CGG - chr1_3:41831235-41831254 None:intergenic 70.0%
TCGCGGGCCCCGCTAGTGGA+CGG + chr1_3:41826605-41826624 Msa0118690:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 41826189 41834150 41826189 ID=Msa0118690;Name=Msa0118690
chr1_3 mRNA 41826189 41834150 41826189 ID=Msa0118690-mRNA-1;Parent=Msa0118690;Name=Msa0118690-mRNA-1;_AED=0.09;_eAED=0.09;_QI=185|1|1|1|1|1|13|452|483
chr1_3 exon 41826189 41826550 41826189 ID=Msa0118690-mRNA-1:exon:12674;Parent=Msa0118690-mRNA-1
chr1_3 exon 41827319 41827400 41827319 ID=Msa0118690-mRNA-1:exon:12675;Parent=Msa0118690-mRNA-1
chr1_3 exon 41827515 41827604 41827515 ID=Msa0118690-mRNA-1:exon:12676;Parent=Msa0118690-mRNA-1
chr1_3 exon 41827803 41827928 41827803 ID=Msa0118690-mRNA-1:exon:12677;Parent=Msa0118690-mRNA-1
chr1_3 exon 41828720 41828847 41828720 ID=Msa0118690-mRNA-1:exon:12678;Parent=Msa0118690-mRNA-1
chr1_3 exon 41829648 41829844 41829648 ID=Msa0118690-mRNA-1:exon:12679;Parent=Msa0118690-mRNA-1
chr1_3 exon 41830308 41830371 41830308 ID=Msa0118690-mRNA-1:exon:12680;Parent=Msa0118690-mRNA-1
chr1_3 exon 41831059 41831169 41831059 ID=Msa0118690-mRNA-1:exon:12681;Parent=Msa0118690-mRNA-1
chr1_3 exon 41832474 41832611 41832474 ID=Msa0118690-mRNA-1:exon:12682;Parent=Msa0118690-mRNA-1
chr1_3 exon 41833012 41833154 41833012 ID=Msa0118690-mRNA-1:exon:12683;Parent=Msa0118690-mRNA-1
chr1_3 exon 41833283 41833337 41833283 ID=Msa0118690-mRNA-1:exon:12684;Parent=Msa0118690-mRNA-1
chr1_3 exon 41833466 41833522 41833466 ID=Msa0118690-mRNA-1:exon:12685;Parent=Msa0118690-mRNA-1
chr1_3 exon 41833615 41834150 41833615 ID=Msa0118690-mRNA-1:exon:12686;Parent=Msa0118690-mRNA-1
chr1_3 five_prime_UTR 41826189 41826373 41826189 ID=Msa0118690-mRNA-1:five_prime_utr;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41826374 41826550 41826374 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41827319 41827400 41827319 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41827515 41827604 41827515 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41827803 41827928 41827803 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41828720 41828847 41828720 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41829648 41829844 41829648 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41830308 41830371 41830308 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41831059 41831169 41831059 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41832474 41832611 41832474 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41833012 41833154 41833012 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41833283 41833337 41833283 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41833466 41833522 41833466 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 CDS 41833615 41833698 41833615 ID=Msa0118690-mRNA-1:cds;Parent=Msa0118690-mRNA-1
chr1_3 three_prime_UTR 41833699 41834150 41833699 ID=Msa0118690-mRNA-1:three_prime_utr;Parent=Msa0118690-mRNA-1
Gene Sequence

>Msa0118690

ATGGAGATTGACACAGTGACAGAGGCGGCAGTAGTGGAGGAGAAGAGAACGACAGTCAACAACGTGATGTGTCTATTGACAGACCAAGATGGTGGTCCTATTGGTGCTCCTATGTACCTTCCTCAGAATATTGGTCCTCAACAGCTTCAACTCATCGTTAATCAGCTTCTGAACAATGAGGAGAAATTGCCGTATGCTTTTTATATATCAGACGAGGAGCTTCTTGTACCACTTGAAACATACCTGCAAAAACACAAAGTCTCTGTGGAGAAGGCATTGCCTATAGTTTGTCAACCTCAAGCTGTTTTCCGGATTCGTCCTGTGAATCGATGTTCTGCGACAATTTCTGGTCATGGTGAAGCTGTATTGAGTGTTGCCTTTAGTCCTGATGGGCGGCAGCTAGCTAGTGGTTCTGGTGATACCACTGTTCGATTTTGGGATCTTGGCACTCAAACACCAATGTACACATGCACAGGGCACAAGAACTGGGTACTTTGTATTGCATGGTCACCAGATGGCAAGTATCTTGTTAGTGGGAGCATGTCAGGAGAACTTATATGTTGGGACCCACAAACTGGAAAGCAATTAGGCAATGCTCTAACTGGCCACAAGAAATGGATTACTGGTATCTCTTGGGAACCTGTCCATTTGAATGCTCCTTGCCGTCGCTTTGTAAGTGCCAGCAAAGATGGGGATGCTCGTATATGGGATGTTTCTTTAAAGAAATGTATTGTACTCTGTGGCCACACACTTGCAGTAACATGTGTAAAATGGGGTGGAGATGGTGTGATTTATACTGGGTCCCAGGACTGTACAATCAAAGTTTGGGAAACCACGGAAGGGAAGCTAATTCGGGAACTGAAGGGACATGGGCATTGGGTTAATTCTTTAGCATTGAGCACTGAGTATGTTCTTCGCACCGGAGCTTTTGATCATACTGGGAAACAGTATTCATCTCCAGATGAAATGAAGAAGGTCGCTCTTGAAAGGTACAACACAACGAGAGGTACTGCCCCTGAAAGATTGGTCTCTGGATCTGATGATTTCACAATGTTCCTTTGGGAACCCTTCATCAACAAGCACCCCAAAACTCGCATGACAGGTCATCAGCAGCTTGTGAACCATGTCTATTTTTCGCCTGACGGGCAATGGATAGCGAGCGCATCTTTTGATAAATCTGTGAAGATATGGAATGGCACTACAGGGAAATTTGTCACTGCCTTCCGTGGTCATGTTGGGCCTGTTTACCAGATAAGCTGGTCTGCTGATAGTAGACTTCTTTTAAGTGGTAGCAAAGATTCTACACTCAAGGTTTGGGATATTCGGACTCGAAAGTTGAAGCAAGACCTTCCGGGCCATGCTGATGAAGTGTTTTCTGTTGATTGGAGTCCAGATGGAGAGAAGGTAGCTTCTGGTGGTAAGGATAAAGTGTTGAAATTGTGGATGGGATAG
Protein sequence

>Msa0118690

MEIDTVTEAAVVEEKRTTVNNVMCLLTDQDGGPIGAPMYLPQNIGPQQLQLIVNQLLNNEEKLPYAFYISDEELLVPLETYLQKHKVSVEKALPIVCQPQAVFRIRPVNRCSATISGHGEAVLSVAFSPDGRQLASGSGDTTVRFWDLGTQTPMYTCTGHKNWVLCIAWSPDGKYLVSGSMSGELICWDPQTGKQLGNALTGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLKKCIVLCGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTEGKLIRELKGHGHWVNSLALSTEYVLRTGAFDHTGKQYSSPDEMKKVALERYNTTRGTAPERLVSGSDDFTMFLWEPFINKHPKTRMTGHQQLVNHVYFSPDGQWIASASFDKSVKIWNGTTGKFVTAFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTRKLKQDLPGHADEVFSVDWSPDGEKVASGGKDKVLKLWMG*