AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072060 MtrunA17_Chr1g0179101 97.555 859 19 1 1 857 1 859 0.0 1714
Msa0072060 MtrunA17_Chr7g0266031 71.461 883 219 14 1 857 1 876 0.0 1170
Msa0072060 MtrunA17_Chr3g0080101 69.247 465 135 6 397 857 342 802 0.0 655
Msa0072060 MtrunA17_Chr3g0080101 42.568 148 69 3 1 148 1 132 2.03e-22 103
Msa0072060 MtrunA17_Chr2g0290691 64.399 441 150 6 392 825 127 567 0.0 587
Msa0072060 MtrunA17_Chr7g0250631 59.023 471 172 9 400 857 299 761 0.0 551
Msa0072060 MtrunA17_Chr8g0335351 58.386 471 169 8 367 818 258 720 0.0 551
Msa0072060 MtrunA17_Chr7g0227331 67.363 383 119 3 443 819 207 589 0.0 546
Msa0072060 MtrunA17_Chr6g0449401 58.225 462 148 5 399 819 193 650 0.0 537
Msa0072060 MtrunA17_Chr2g0309421 59.305 403 159 4 424 824 132 531 1.11e-163 488
Msa0072060 MtrunA17_Chr8g0356291 58.015 393 154 7 443 829 101 488 6.06e-152 456
Msa0072060 MtrunA17_Chr4g0063311 53.061 392 169 4 443 819 66 457 4.53e-139 422
Msa0072060 MtrunA17_Chr2g0321101 53.018 381 152 6 447 812 66 434 7.28e-128 392
Msa0072060 MtrunA17_Chr8g0381091 49.250 400 166 7 436 819 45 423 2.86e-125 385
Msa0072060 MtrunA17_Chr2g0285711 50.000 392 162 9 443 821 57 427 4.25e-125 384
Msa0072060 MtrunA17_Chr2g0312641 44.708 463 208 15 407 857 33 459 1.14e-111 350
Msa0072060 MtrunA17_Chr4g0030361 45.745 376 156 4 443 818 282 609 1.36e-105 339
Msa0072060 MtrunA17_Chr8g0369091 44.241 382 168 4 443 824 572 908 2.70e-103 341
Msa0072060 MtrunA17_Chr2g0327561 45.263 380 163 4 443 818 601 939 4.51e-101 336
Msa0072060 MtrunA17_Chr4g0032761 39.305 374 194 9 465 819 10 369 2.70e-76 254
Msa0072060 MtrunA17_Chr2g0329011 39.944 358 176 7 465 819 12 333 3.47e-75 250
Msa0072060 MtrunA17_Chr8g0338741 39.733 375 190 10 465 825 15 367 5.53e-75 251
Msa0072060 MtrunA17_Chr7g0234641 38.172 372 198 9 460 819 1 352 2.36e-70 238
Msa0072060 MtrunA17_Chr6g0478601 37.719 342 168 8 467 807 108 405 3.07e-59 211
Msa0072060 MtrunA17_Chr5g0428981 36.550 342 171 8 467 807 760 1056 3.42e-59 219
Msa0072060 MtrunA17_Chr4g0018201 36.257 342 172 8 467 807 756 1052 6.12e-59 218
Msa0072060 MtrunA17_Chr3g0135951 32.258 372 213 11 443 807 67 406 6.62e-48 178
Msa0072060 MtrunA17_Chr1g0187581 31.335 367 212 8 459 820 106 437 2.54e-47 177
Msa0072060 MtrunA17_Chr1g0153321 31.831 355 204 9 459 810 97 416 4.14e-46 173
Msa0072060 MtrunA17_Chr7g0261491 30.633 395 225 12 459 840 109 467 1.62e-45 172
Msa0072060 MtrunA17_Chr1g0183651 31.063 367 212 10 459 820 109 439 7.61e-45 170
Msa0072060 MtrunA17_Chr1g0167351 31.025 361 210 9 465 820 105 431 1.11e-44 169
Msa0072060 MtrunA17_Chr2g0299781 30.029 343 207 8 469 807 112 425 1.41e-41 160
Msa0072060 MtrunA17_Chr1g0167311 28.947 380 233 8 442 819 87 431 1.15e-40 157
Msa0072060 MtrunA17_Chr7g0245031 37.107 159 98 1 465 623 143 299 1.18e-26 114
Msa0072060 MtrunA17_Chr7g0245031 47.748 111 55 2 698 807 301 409 7.19e-24 106
Msa0072060 MtrunA17_Chr4g0059751 37.126 167 91 4 460 617 80 241 1.60e-26 113
Msa0072060 MtrunA17_Chr4g0059751 41.964 112 62 2 698 808 249 358 1.23e-24 107
Msa0072060 MtrunA17_Chr1g0197721 36.667 150 89 2 467 614 48 193 1.10e-25 112
Msa0072060 MtrunA17_Chr1g0197721 36.800 125 76 2 695 818 212 334 4.02e-15 79.3
Msa0072060 MtrunA17_Chr8g0351491 27.300 337 164 8 467 803 13 268 8.17e-24 102
Msa0072060 MtrunA17_Chr3g0125381 35.294 153 89 2 651 803 65 207 7.30e-23 97.8
Msa0072060 MtrunA17_Chr3g0125381 35.922 103 62 2 520 621 2 101 8.72e-12 65.5
Msa0072060 MtrunA17_Chr8g0353621 27.164 335 163 8 467 801 7 260 6.35e-21 93.6
Msa0072060 MtrunA17_Chr3g0140631 36.129 155 93 2 467 619 34 184 2.45e-20 92.8
Msa0072060 MtrunA17_Chr3g0140631 37.963 108 63 1 695 802 185 288 4.88e-17 82.8
Msa0072060 MtrunA17_Chr6g0453681 26.549 339 165 9 467 803 16 272 2.11e-19 92.4
Msa0072060 MtrunA17_Chr2g0284031 26.462 325 163 7 465 788 26 275 4.82e-19 91.7
Msa0072060 MtrunA17_Chr6g0468751 26.627 338 164 9 467 802 16 271 5.34e-19 91.3
Msa0072060 MtrunA17_Chr4g0013131 32.903 155 101 2 463 617 5 156 4.48e-18 88.2
Msa0072060 MtrunA17_Chr3g0114511 33.548 155 98 1 463 617 25 174 2.62e-17 85.5
Msa0072060 MtrunA17_Chr6g0486661 33.548 155 94 5 670 818 883 1034 2.83e-17 87.0
Msa0072060 MtrunA17_Chr3g0132671 26.302 384 163 16 467 816 16 313 4.86e-17 85.1
Msa0072060 MtrunA17_Chr8g0379091 25.704 284 137 6 465 747 21 231 2.55e-16 83.2
Msa0072060 MtrunA17_Chr7g0244521 31.410 156 102 2 463 617 5 156 3.98e-16 82.0
Msa0072060 MtrunA17_Chr3g0107011 29.814 161 109 2 457 617 2 158 4.19e-16 82.0
Msa0072060 MtrunA17_Chr4g0001331 31.757 148 98 1 470 617 20 164 1.25e-15 80.5
Msa0072060 MtrunA17_Chr1g0205421 32.692 156 102 1 461 616 3 155 1.36e-15 80.5
Msa0072060 MtrunA17_Chr1g0188031 32.680 153 99 4 467 617 17 167 1.47e-15 80.1
Msa0072060 MtrunA17_Chr5g0432471 29.139 151 104 2 467 617 9 156 3.19e-15 79.3
Msa0072060 MtrunA17_Chr8g0346071 27.950 161 114 1 470 630 17 175 5.57e-15 78.2
Msa0072060 MtrunA17_Chr2g0284011 28.866 194 120 6 463 653 5 183 7.34e-15 78.2
Msa0072060 MtrunA17_Chr3g0107051 31.757 148 98 2 470 617 21 165 7.52e-15 77.8
Msa0072060 MtrunA17_Chr2g0304111 30.000 150 99 2 470 617 23 168 8.47e-15 77.8
Msa0072060 MtrunA17_Chr4g0074111 30.323 155 105 2 462 616 10 161 1.12e-14 77.0
Msa0072060 MtrunA17_Chr7g0272841 33.557 149 88 4 476 617 74 218 1.39e-14 77.8
Msa0072060 MtrunA17_Chr6g0450571 31.818 154 101 3 465 617 11 161 2.23e-14 77.4
Msa0072060 MtrunA17_Chr8g0346081 27.950 161 114 2 470 630 17 175 3.19e-14 75.9
Msa0072060 MtrunA17_Chr2g0286501 33.117 154 93 3 467 619 46 190 4.40e-14 77.0
Msa0072060 MtrunA17_Chr3g0091311 30.968 155 104 1 463 617 5 156 4.62e-14 73.2
Msa0072060 MtrunA17_Chr2g0302431 30.189 159 109 2 459 617 9 165 5.80e-14 75.5
Msa0072060 MtrunA17_Chr7g0274941 38.318 107 59 3 698 801 171 273 6.53e-14 73.6
Msa0072060 MtrunA17_Chr7g0274941 30.201 149 99 3 468 614 14 159 1.58e-12 69.3
Msa0072060 MtrunA17_Chr1g0190131 37.624 101 57 2 703 801 167 263 8.00e-14 72.8
Msa0072060 MtrunA17_Chr5g0441011 31.707 123 78 2 497 617 40 158 1.11e-13 74.3
Msa0072060 MtrunA17_Chr3g0130151 32.278 158 99 3 474 627 248 401 1.13e-13 75.1
Msa0072060 MtrunA17_Chr4g0008561 37.736 106 60 3 699 802 175 276 1.46e-13 74.7
Msa0072060 MtrunA17_Chr1g0190831 28.571 154 104 3 467 617 1 151 2.09e-13 73.9
Msa0072060 MtrunA17_Chr2g0321841 29.375 160 105 4 467 621 1 157 2.84e-13 73.9
Msa0072060 MtrunA17_Chr1g0150321 32.051 156 101 2 462 617 7 157 2.85e-13 72.8
Msa0072060 MtrunA17_Chr4g0025671 29.221 154 103 3 467 617 5 155 3.77e-13 73.6
Msa0072060 MtrunA17_Chr1g0166101 29.605 152 104 2 467 617 21 170 4.70e-13 72.0
Msa0072060 MtrunA17_Chr5g0428031 25.153 163 116 2 470 630 9 167 5.93e-13 72.0
Msa0072060 MtrunA17_Chr5g0432491 31.757 148 99 2 470 617 23 168 5.94e-13 72.0
Msa0072060 MtrunA17_Chr2g0317001 31.081 148 98 2 470 617 15 158 7.33e-13 72.4
Msa0072060 MtrunA17_Chr8g0386981 33.562 146 89 3 476 617 414 555 1.02e-12 72.4
Msa0072060 MtrunA17_Chr1g0203881 34.211 152 94 4 470 617 41 190 1.03e-12 71.6
Msa0072060 MtrunA17_Chr4g0000431 29.221 154 105 3 465 617 19 169 1.07e-12 72.0
Msa0072060 MtrunA17_Chr1g0188991 23.315 356 184 11 468 818 13 284 2.08e-12 70.9
Msa0072060 MtrunA17_Chr5g0419441 30.405 148 100 2 470 617 239 383 2.15e-12 71.2
Msa0072060 MtrunA17_Chr1g0176751 34.746 118 64 4 700 815 283 389 2.20e-12 70.9
Msa0072060 MtrunA17_Chr1g0170551 34.906 106 63 2 701 806 162 261 2.27e-12 71.2
Msa0072060 MtrunA17_Chr4g0061141 31.844 179 97 7 452 617 85 251 2.43e-12 70.9
Msa0072060 MtrunA17_Chr2g0333821 33.108 148 96 2 470 617 14 158 4.03e-12 69.3
Msa0072060 MtrunA17_Chr1g0202831 30.137 146 98 3 474 617 415 558 4.19e-12 70.1
Msa0072060 MtrunA17_Chr7g0252301 30.952 168 107 4 469 633 854 1015 4.47e-12 70.1
Msa0072060 MtrunA17_Chr4g0063881 30.894 123 79 2 497 617 38 156 5.67e-12 68.9
Msa0072060 MtrunA17_Chr8g0384301 31.210 157 102 4 474 627 303 456 5.69e-12 69.7
Msa0072060 MtrunA17_Chr1g0200601 35.032 157 95 5 467 618 26 180 7.73e-12 68.6
Msa0072060 MtrunA17_Chr1g0173921 27.389 157 112 2 467 622 1 156 7.88e-12 69.3
Msa0072060 MtrunA17_Chr2g0330211 30.667 150 99 3 470 617 18 164 8.45e-12 68.6
Msa0072060 MtrunA17_Chr3g0132591 36.054 147 80 4 476 619 118 253 9.27e-12 68.6
Msa0072060 MtrunA17_Chr4g0040141 33.544 158 84 6 470 617 129 275 9.30e-12 68.9
Msa0072060 MtrunA17_Chr8g0385341 31.613 155 96 4 470 618 30 180 1.49e-11 67.8
Msa0072060 MtrunA17_Chr4g0047191 22.951 244 115 3 517 760 94 264 1.50e-11 67.0
Msa0072060 MtrunA17_Chr1g0185221 27.922 154 105 3 467 617 1 151 1.56e-11 68.2
Msa0072060 MtrunA17_Chr7g0258051 26.452 155 110 3 467 619 13 165 1.65e-11 68.2
Msa0072060 MtrunA17_Chr4g0047211 22.951 244 115 3 517 760 89 259 2.17e-11 66.6
Msa0072060 MtrunA17_Chr3g0131861 33.125 160 84 7 469 617 96 243 6.15e-11 65.9
Msa0072060 MtrunA17_Chr2g0276831 31.737 167 99 6 474 633 14 172 8.92e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072060 AT3G52890.2 52.824 956 330 32 1 857 1 934 0.0 828
Msa0072060 AT3G52890.4 52.824 956 330 32 1 857 1 934 0.0 828
Msa0072060 AT3G52890.1 52.824 956 330 32 1 857 1 934 0.0 828
Msa0072060 AT3G52890.3 52.824 956 330 32 1 857 1 934 0.0 828
Msa0072060 AT2G36350.1 50.934 964 351 24 1 857 1 949 0.0 823
Msa0072060 AT5G03640.2 70.742 458 105 10 419 857 479 926 0.0 659
Msa0072060 AT5G03640.2 34.015 391 184 14 1 371 1 337 3.29e-32 135
Msa0072060 AT5G03640.1 70.742 458 105 10 419 857 479 926 0.0 659
Msa0072060 AT5G03640.1 34.015 391 184 14 1 371 1 337 3.29e-32 135
Msa0072060 AT5G47750.1 61.345 476 173 7 392 857 112 586 0.0 587
Msa0072060 AT4G26610.1 62.850 428 154 4 401 825 54 479 0.0 557
Msa0072060 AT5G55910.2 60.970 433 152 7 403 825 44 469 4.36e-180 528
Msa0072060 AT5G55910.1 60.970 433 152 7 403 825 44 469 4.36e-180 528
Msa0072060 AT2G44830.2 61.882 425 148 7 408 825 303 720 1.04e-179 536
Msa0072060 AT2G44830.3 61.882 425 148 7 408 825 303 720 1.04e-179 536
Msa0072060 AT2G44830.1 61.882 425 148 7 408 825 303 720 1.04e-179 536
Msa0072060 AT3G27580.2 64.398 382 130 6 443 819 153 533 2.32e-172 511
Msa0072060 AT3G27580.1 64.398 382 130 6 443 819 153 533 2.32e-172 511
Msa0072060 AT5G40030.1 57.631 439 163 9 430 857 73 499 7.18e-170 502
Msa0072060 AT3G12690.1 62.368 380 131 3 443 820 158 527 4.44e-165 492
Msa0072060 AT3G12690.3 62.368 380 131 3 443 820 158 527 4.44e-165 492
Msa0072060 AT3G12690.2 62.368 380 131 3 443 820 158 527 4.44e-165 492
Msa0072060 AT1G79250.1 60.614 391 152 2 436 824 112 502 8.01e-165 491
Msa0072060 AT1G79250.3 60.614 391 152 2 436 824 112 502 8.01e-165 491
Msa0072060 AT1G79250.2 60.614 391 152 2 436 824 112 502 8.01e-165 491
Msa0072060 AT1G79250.4 60.614 391 152 2 436 824 112 502 8.01e-165 491
Msa0072060 AT1G16440.1 59.375 384 143 5 443 824 86 458 2.26e-155 464
Msa0072060 AT3G44610.1 55.000 360 130 7 475 812 74 423 2.71e-128 393
Msa0072060 AT2G34650.1 52.972 387 147 8 443 819 50 411 3.02e-128 392
Msa0072060 AT2G26700.1 46.188 446 186 9 425 819 40 482 2.16e-125 388
Msa0072060 AT5G58140.6 45.333 375 160 2 444 818 551 880 8.16e-104 342
Msa0072060 AT5G58140.7 45.333 375 160 2 444 818 551 880 8.16e-104 342
Msa0072060 AT5G58140.5 45.333 375 160 2 444 818 551 880 8.16e-104 342
Msa0072060 AT5G58140.2 45.333 375 160 2 444 818 551 880 8.16e-104 342
Msa0072060 AT5G58140.1 45.333 375 160 2 444 818 551 880 8.16e-104 342
Msa0072060 AT3G14370.1 44.764 382 171 6 445 817 61 411 1.21e-103 329
Msa0072060 AT5G58140.3 45.380 368 156 2 444 811 551 873 2.09e-102 338
Msa0072060 AT1G53700.1 45.128 390 169 9 445 823 66 421 1.63e-98 316
Msa0072060 AT3G45780.2 43.883 376 168 2 443 818 636 968 1.82e-97 327
Msa0072060 AT3G45780.1 43.883 376 168 2 443 818 636 968 1.82e-97 327
Msa0072060 AT3G20830.1 38.974 390 195 11 464 836 15 378 1.06e-71 242
Msa0072060 AT1G51170.1 39.674 368 183 9 465 819 17 358 5.02e-71 240
Msa0072060 AT4G13000.1 36.388 371 199 10 465 831 15 352 5.32e-67 228
Msa0072060 AT3G25250.1 35.829 374 195 9 459 819 6 347 1.99e-65 225
Msa0072060 AT1G45160.2 38.162 359 166 8 465 817 665 973 7.56e-59 218
Msa0072060 AT1G45160.1 38.162 359 166 8 465 817 665 973 1.31e-58 217
Msa0072060 AT1G48490.4 37.391 345 163 10 465 807 824 1117 6.52e-58 216
Msa0072060 AT1G48490.3 37.391 345 163 10 465 807 823 1116 6.88e-58 216
Msa0072060 AT1G48490.2 37.391 345 163 10 465 807 823 1116 6.88e-58 216
Msa0072060 AT1G48490.1 37.391 345 163 10 465 807 823 1116 6.88e-58 216
Msa0072060 AT5G62310.1 37.026 343 169 10 467 807 751 1048 1.30e-57 215
Msa0072060 AT3G17850.1 37.135 342 170 8 467 807 879 1176 5.83e-57 213
Msa0072060 AT1G30640.2 30.688 378 225 8 448 821 98 442 2.61e-49 184
Msa0072060 AT1G30640.1 30.688 378 225 8 448 821 98 442 2.61e-49 184
Msa0072060 AT1G30640.3 30.423 378 226 8 448 821 5 349 4.72e-49 181
Msa0072060 AT4G14350.2 31.414 382 220 9 445 820 94 439 3.17e-46 174
Msa0072060 AT4G14350.1 31.414 382 220 9 445 820 94 439 3.17e-46 174
Msa0072060 AT4G14350.4 31.414 382 220 9 445 820 94 439 3.17e-46 174
Msa0072060 AT4G14350.3 31.414 382 220 9 445 820 94 439 3.25e-46 174
Msa0072060 AT3G23310.1 28.970 466 276 14 363 820 24 442 3.38e-45 172
Msa0072060 AT2G20470.3 30.518 367 213 8 459 820 113 442 4.56e-45 171
Msa0072060 AT1G03920.1 30.894 369 210 10 459 820 126 456 6.71e-45 171
Msa0072060 AT1G03920.3 30.894 369 210 10 459 820 126 456 6.71e-45 171
Msa0072060 AT5G09890.2 30.812 357 201 8 459 807 91 409 7.23e-45 170
Msa0072060 AT2G20470.2 29.973 367 215 8 459 820 113 442 7.58e-45 171
Msa0072060 AT2G20470.1 29.973 367 215 8 459 820 113 442 7.58e-45 171
Msa0072060 AT5G09890.1 30.812 357 201 8 459 807 91 409 8.43e-45 169
Msa0072060 AT1G03920.2 30.894 369 210 10 459 820 13 343 1.20e-44 168
Msa0072060 AT4G33080.1 29.351 385 233 10 445 820 69 423 1.49e-44 169
Msa0072060 AT4G33080.2 29.351 385 233 10 445 820 69 423 1.57e-44 169
Msa0072060 AT2G19400.1 29.598 348 212 8 465 807 100 419 2.46e-38 151
Msa0072060 AT5G58140.4 43.511 131 74 0 444 574 551 681 4.06e-29 124
Msa0072060 AT3G08720.1 38.710 155 93 1 463 617 133 285 3.14e-28 119
Msa0072060 AT3G08720.1 48.673 113 54 3 696 807 291 400 7.91e-27 115
Msa0072060 AT3G08720.3 38.710 155 93 1 463 617 133 285 3.14e-28 119
Msa0072060 AT3G08720.3 48.673 113 54 3 696 807 291 400 7.91e-27 115
Msa0072060 AT3G08720.4 38.710 155 93 1 463 617 133 285 3.14e-28 119
Msa0072060 AT3G08720.4 48.673 113 54 3 696 807 291 400 7.91e-27 115
Msa0072060 AT3G08720.2 38.710 155 93 1 463 617 133 285 3.14e-28 119
Msa0072060 AT3G08720.2 48.673 113 54 3 696 807 291 400 7.91e-27 115
Msa0072060 AT2G25090.1 27.976 336 167 9 470 802 15 278 5.66e-28 119
Msa0072060 AT3G08730.1 38.065 155 94 1 463 617 127 279 1.14e-27 118
Msa0072060 AT3G08730.1 49.558 113 53 3 696 807 285 394 1.53e-27 117
Msa0072060 AT3G08730.2 38.065 155 94 1 463 617 127 279 1.14e-27 118
Msa0072060 AT3G08730.2 49.558 113 53 3 696 807 285 394 1.53e-27 117
Msa0072060 AT5G04510.3 35.196 179 104 3 438 614 18 186 2.43e-26 110
Msa0072060 AT5G04510.2 35.196 179 104 3 438 614 18 186 3.16e-26 112
Msa0072060 AT5G04510.2 35.938 128 78 3 695 820 205 330 2.31e-18 89.0
Msa0072060 AT5G04510.1 35.196 179 104 3 438 614 18 186 4.44e-26 113
Msa0072060 AT5G04510.1 35.938 128 78 3 695 820 205 330 2.02e-18 89.7
Msa0072060 AT3G10540.1 35.196 179 104 3 438 614 19 187 2.37e-25 111
Msa0072060 AT3G10540.1 35.156 128 79 3 695 820 206 331 6.85e-18 88.2
Msa0072060 AT2G20050.2 42.241 116 61 3 698 810 931 1043 5.78e-20 96.3
Msa0072060 AT2G20050.1 42.241 116 61 3 698 810 934 1046 6.14e-20 96.3
Msa0072060 AT2G45490.1 41.905 105 57 1 698 802 173 273 8.50e-20 91.3
Msa0072060 AT2G45490.1 33.117 154 99 2 467 619 19 169 3.69e-17 83.6
Msa0072060 AT4G18700.1 26.543 324 162 7 465 787 21 269 1.31e-19 93.6
Msa0072060 AT3G01090.3 26.944 360 173 12 467 823 16 288 2.84e-19 92.8
Msa0072060 AT3G01090.1 26.944 360 173 12 467 823 16 288 2.84e-19 92.8
Msa0072060 AT5G45810.1 25.455 330 170 7 459 787 17 271 2.85e-19 92.4
Msa0072060 AT3G01090.2 26.944 360 173 12 467 823 39 311 3.26e-19 92.8
Msa0072060 AT3G29160.3 25.959 339 167 9 467 803 17 273 8.73e-19 89.7
Msa0072060 AT3G29160.1 25.959 339 167 9 467 803 17 273 1.63e-18 90.5
Msa0072060 AT3G29160.2 25.959 339 167 9 467 803 17 273 1.63e-18 90.5
Msa0072060 AT2G25880.2 40.187 107 60 1 695 801 141 243 1.79e-18 86.7
Msa0072060 AT2G25880.4 40.187 107 60 1 695 801 186 288 2.87e-18 87.0
Msa0072060 AT2G25880.4 28.708 209 139 3 469 675 37 237 3.46e-17 83.6
Msa0072060 AT2G25880.1 40.187 107 60 1 695 801 173 275 3.09e-18 86.7
Msa0072060 AT2G25880.1 28.708 209 139 3 469 675 24 224 1.38e-17 84.7
Msa0072060 AT5G45820.1 32.484 157 103 2 461 617 3 156 3.11e-18 89.0
Msa0072060 AT5G18700.1 35.484 155 92 3 467 621 1 147 3.98e-18 90.5
Msa0072060 AT2G25880.3 40.187 107 60 1 695 801 234 336 7.63e-18 86.7
Msa0072060 AT2G25880.3 28.708 209 139 3 469 675 85 285 1.01e-16 83.2
Msa0072060 AT2G34180.1 24.355 349 184 8 456 803 43 312 1.09e-17 87.8
Msa0072060 AT4G32830.1 35.714 154 93 2 467 618 28 177 1.26e-17 84.7
Msa0072060 AT4G32830.1 38.318 107 62 1 695 801 179 281 3.06e-17 84.0
Msa0072060 AT5G25110.1 31.977 172 110 3 449 617 20 187 2.29e-17 86.7
Msa0072060 AT2G45490.2 33.117 154 99 2 467 619 19 169 4.66e-17 82.4
Msa0072060 AT2G45490.2 39.024 82 50 0 698 779 173 254 3.01e-13 71.2
Msa0072060 AT1G29230.1 25.078 319 163 6 470 787 74 317 8.08e-17 85.1
Msa0072060 AT1G12680.1 33.333 159 96 4 469 626 106 255 2.14e-16 83.6
Msa0072060 AT5G10930.1 34.667 150 92 5 470 617 12 157 4.41e-16 82.4
Msa0072060 AT4G14580.1 32.051 156 103 3 463 617 14 167 5.50e-16 81.6
Msa0072060 AT4G24400.1 29.448 163 109 2 470 630 9 167 8.75e-16 81.3
Msa0072060 AT4G24400.2 29.448 163 109 2 470 630 9 167 9.96e-16 80.9
Msa0072060 AT5G01810.1 32.911 158 102 3 464 621 7 160 1.57e-15 80.5
Msa0072060 AT5G01810.2 32.911 158 102 3 464 621 7 160 1.57e-15 80.5
Msa0072060 AT5G01810.3 32.911 158 102 3 464 621 7 160 2.53e-15 79.3
Msa0072060 AT5G58380.1 22.222 333 181 8 470 802 12 266 4.95e-15 79.3
Msa0072060 AT1G08650.1 38.835 103 57 2 703 803 176 274 7.82e-15 76.3
Msa0072060 AT3G23000.1 32.468 154 97 3 467 617 22 171 8.13e-15 78.2
Msa0072060 AT3G06030.1 34.694 147 89 4 476 617 74 218 9.22e-15 79.0
Msa0072060 AT3G04810.2 29.870 154 102 3 467 617 1 151 1.30e-14 78.2
Msa0072060 AT3G04810.1 29.870 154 102 3 467 617 1 151 1.30e-14 78.2
Msa0072060 AT3G04810.3 29.870 154 102 3 467 617 1 151 1.30e-14 78.2
Msa0072060 AT1G70430.3 31.373 153 103 1 465 617 11 161 1.53e-14 78.2
Msa0072060 AT1G70430.1 31.373 153 103 1 465 617 11 161 1.65e-14 78.2
Msa0072060 AT1G70430.4 31.373 153 103 1 465 617 11 161 1.65e-14 78.2
Msa0072060 AT1G53570.6 32.121 165 106 5 466 627 210 371 1.73e-14 77.8
Msa0072060 AT1G53570.7 32.121 165 106 5 466 627 210 371 1.75e-14 77.8
Msa0072060 AT1G30270.1 32.667 150 95 4 470 617 31 176 2.04e-14 77.4
Msa0072060 AT1G08650.2 41.304 92 52 1 703 792 176 267 2.15e-14 75.1
Msa0072060 AT1G53570.4 32.121 165 106 5 466 627 210 371 2.90e-14 77.4
Msa0072060 AT1G53570.2 32.121 165 106 5 466 627 210 371 2.98e-14 77.4
Msa0072060 AT1G53570.3 32.121 165 106 5 466 627 210 371 2.98e-14 77.4
Msa0072060 AT1G53570.1 32.121 165 106 5 466 627 210 371 3.06e-14 77.0
Msa0072060 AT1G30270.2 32.667 150 95 4 470 617 31 176 3.11e-14 76.6
Msa0072060 AT5G57630.1 27.673 159 107 3 463 617 2 156 5.29e-14 75.5
Msa0072060 AT5G57630.2 27.673 159 107 3 463 617 2 156 5.51e-14 75.5
Msa0072060 AT3G17510.1 28.033 239 135 7 467 673 17 250 6.63e-14 75.5
Msa0072060 AT5G14720.1 31.169 154 102 3 465 617 11 161 7.60e-14 75.9
Msa0072060 AT5G14720.2 31.169 154 102 3 465 617 11 161 7.60e-14 75.9
Msa0072060 AT2G30360.1 32.903 155 97 5 470 621 21 171 9.88e-14 74.7
Msa0072060 AT1G09000.1 32.653 147 92 4 476 617 75 219 1.00e-13 75.5
Msa0072060 AT1G01140.3 30.201 149 102 2 469 617 18 164 1.07e-13 74.7
Msa0072060 AT1G09000.2 32.639 144 90 4 476 614 75 216 1.08e-13 75.5
Msa0072060 AT1G01140.1 30.201 149 102 2 469 617 18 164 1.09e-13 74.7
Msa0072060 AT1G01140.2 30.201 149 102 2 469 617 18 164 1.14e-13 74.7
Msa0072060 AT1G54960.1 32.653 147 92 4 476 617 74 218 1.57e-13 75.1
Msa0072060 AT1G54960.2 32.653 147 92 4 476 617 74 218 1.57e-13 75.1
Msa0072060 AT2G26980.2 33.058 121 79 2 497 617 41 159 2.26e-13 71.6
Msa0072060 AT5G28290.3 29.870 154 102 3 467 617 1 151 2.82e-13 73.9
Msa0072060 AT5G28290.1 29.870 154 102 3 467 617 1 151 2.96e-13 73.9
Msa0072060 AT5G28290.2 29.870 154 102 3 467 617 1 151 2.96e-13 73.9
Msa0072060 AT1G32320.1 32.895 152 92 3 467 617 45 187 3.30e-13 72.0
Msa0072060 AT2G26980.1 33.058 121 79 2 497 617 41 159 3.80e-13 72.8
Msa0072060 AT2G26980.3 33.058 121 79 2 497 617 41 159 3.89e-13 73.2
Msa0072060 AT3G04530.1 35.106 94 59 1 699 790 168 261 3.90e-13 71.2
Msa0072060 AT2G26980.4 33.058 121 79 2 497 617 51 169 4.59e-13 72.8
Msa0072060 AT2G26980.5 33.058 121 79 2 497 617 41 159 4.79e-13 72.8
Msa0072060 AT4G30960.1 33.108 148 96 2 470 617 24 168 6.55e-13 72.4
Msa0072060 AT3G44200.2 29.375 160 105 4 467 621 5 161 7.22e-13 73.2
Msa0072060 AT3G44200.1 29.375 160 105 4 467 621 5 161 7.22e-13 73.2
Msa0072060 AT4G09570.1 35.669 157 94 5 467 618 21 175 8.51e-13 72.4
Msa0072060 AT5G39440.1 31.373 153 99 2 467 617 16 164 1.18e-12 71.6
Msa0072060 AT5G21326.1 31.707 123 78 2 497 617 40 158 1.27e-12 71.2
Msa0072060 AT5G39420.1 33.708 178 95 7 452 617 85 251 2.03e-12 71.2
Msa0072060 AT2G38490.1 33.987 153 88 5 470 617 28 172 2.93e-12 70.1
Msa0072060 AT5G38210.3 28.116 345 192 15 308 617 175 498 3.01e-12 70.9
Msa0072060 AT5G38210.2 28.116 345 192 15 308 617 193 516 3.07e-12 70.9
Msa0072060 AT1G54510.4 27.922 154 105 3 467 617 1 151 3.34e-12 70.5
Msa0072060 AT1G54510.2 27.922 154 105 3 467 617 1 151 3.34e-12 70.5
Msa0072060 AT1G54510.1 27.922 154 105 3 467 617 1 151 3.34e-12 70.5
Msa0072060 AT1G54510.3 27.922 154 105 3 467 617 1 151 3.34e-12 70.5
Msa0072060 AT4G24100.1 29.139 151 103 2 468 617 31 178 3.95e-12 70.5
Msa0072060 AT4G24100.2 29.139 151 103 2 468 617 31 178 4.40e-12 70.5
Msa0072060 AT5G35410.2 28.824 170 111 4 497 662 38 201 4.73e-12 69.3
Msa0072060 AT4G24100.4 29.139 151 103 2 468 617 47 194 5.18e-12 70.1
Msa0072060 AT1G50240.3 34.951 103 61 2 701 803 161 257 5.42e-12 70.5
Msa0072060 AT1G50240.2 34.951 103 61 2 701 803 161 257 5.42e-12 70.5
Msa0072060 AT4G24100.3 29.139 151 103 2 468 617 47 194 5.79e-12 70.1
Msa0072060 AT4G14480.1 30.201 149 101 2 470 617 15 161 6.52e-12 69.3
Msa0072060 AT1G69220.1 29.801 151 97 3 470 617 249 393 6.56e-12 70.1
Msa0072060 AT1G53165.1 29.730 148 100 2 470 617 15 158 8.52e-12 69.3
Msa0072060 AT5G35410.1 28.824 170 111 4 497 662 38 201 9.17e-12 68.6
Msa0072060 AT1G53165.2 29.730 148 100 2 470 617 15 158 9.40e-12 69.3
Msa0072060 AT1G35670.1 35.032 157 95 5 467 618 22 176 9.52e-12 68.9
Msa0072060 AT3G20860.1 25.828 151 111 1 467 617 1 150 9.52e-12 68.6
Msa0072060 AT1G53165.3 29.730 148 100 2 470 617 15 158 9.68e-12 69.3
Msa0072060 AT1G24650.1 31.795 195 112 8 433 616 513 697 9.92e-12 69.3
Msa0072060 AT4G04720.2 30.323 155 98 4 470 618 80 230 1.05e-11 68.9
Msa0072060 AT4G04720.1 30.323 155 98 4 470 618 80 230 1.05e-11 68.9
Msa0072060 AT5G01820.1 32.237 152 100 2 470 621 22 170 1.09e-11 68.6
Msa0072060 AT2G41860.2 31.410 156 99 4 468 618 52 204 1.20e-11 68.6
Msa0072060 AT2G41860.1 31.410 156 99 4 468 618 52 204 1.23e-11 68.6
Msa0072060 AT3G15220.1 29.054 148 101 2 470 617 15 158 1.38e-11 68.9
Msa0072060 AT5G38210.1 30.303 264 153 11 366 617 260 504 1.99e-11 68.2
Msa0072060 AT2G01820.1 33.766 154 94 5 469 616 584 735 2.02e-11 68.6
Msa0072060 AT1G48260.1 31.646 158 96 5 466 617 5 156 2.93e-11 67.0
Msa0072060 AT1G63700.1 30.556 144 96 3 476 617 406 547 4.53e-11 67.4
Msa0072060 AT1G63700.2 30.556 144 96 3 476 617 406 547 4.53e-11 67.4
Msa0072060 AT1G73500.1 29.775 178 104 6 473 646 50 210 7.48e-11 64.7

Find 200 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTCTTCGAGGGGCTTAAT+TGG 0.182487 1_2:+44695535 Msa0072060:CDS
CCAAAGCAGGGTTCTGATTC+TGG 0.182601 1_2:+44692846 Msa0072060:CDS
ATAGATCCTGCCAAGGTTTC+TGG 0.192162 1_2:+44695033 Msa0072060:CDS
TAATAGCAAACAAACAATTT+TGG 0.195592 1_2:-44693343 None:intergenic
TTTCGGAAGACTGAACATTT+TGG 0.262861 1_2:-44692473 None:intergenic
GAAGCTTCCTCCGCTGAAAC+TGG 0.270970 1_2:+44691987 Msa0072060:CDS
GTATATCTTTCTGAACTAAT+TGG 0.279231 1_2:+44693320 Msa0072060:CDS
TCCTCATCTACATCAATAAA+TGG 0.282055 1_2:+44692741 Msa0072060:CDS
GATCATAAAGAACAAGAGTT+TGG 0.300248 1_2:+44692812 Msa0072060:CDS
CAAATGCAGCATGGAGTATT+AGG 0.309280 1_2:+44693245 Msa0072060:CDS
TTCATTGATGCGAAGTGATT+TGG 0.314477 1_2:+44692524 Msa0072060:CDS
TGCTGAAGTCCTTCTTGCTT+TGG 0.319482 1_2:+44694864 Msa0072060:CDS
TTCCCGGCCTCTGATATTCT+TGG 0.322131 1_2:-44692279 None:intergenic
CCAATGTTGACAGTAGTAAA+AGG 0.324778 1_2:+44692355 Msa0072060:CDS
TTTGAATGGGTTCTAATGAT+TGG 0.331451 1_2:-44692578 None:intergenic
CGCTATCCCACCAGAACTTC+CGG 0.340060 1_2:+44695572 Msa0072060:CDS
TCACAAAGGTCCGGAAGTTC+TGG 0.345663 1_2:-44695582 None:intergenic
AATGTCAGTGGTTCTAGTTT+TGG 0.355133 1_2:+44693170 Msa0072060:CDS
TCCCTCTCCTTTGATGATCT+CGG 0.360706 1_2:-44695268 None:intergenic
GTCACTGATGCTAGGAGATC+AGG 0.369169 1_2:+44692327 Msa0072060:CDS
AGGATATATCCGTCCAGTTC+AGG 0.377399 1_2:+44691940 Msa0072060:CDS
AAGAGACCTATGTATATCTA+AGG 0.380607 1_2:+44692209 Msa0072060:CDS
TTCAAGTTTATTCCATCTGC+AGG 0.380968 1_2:-44692987 None:intergenic
TACAACATAGGCTTACATAA+TGG 0.387314 1_2:-44695790 None:intergenic
GCAGTTGCAGAAAATGAAAC+AGG 0.388859 1_2:+44692498 Msa0072060:CDS
AATGTTCATCAAGTAAAGTT+GGG 0.393315 1_2:+44692547 Msa0072060:CDS
TTAGTTATGTACCTTGCTGC+TGG 0.394633 1_2:-44693578 None:intergenic
GCAGTTGATTGGTGGACTTT+TGG 0.396090 1_2:+44695300 Msa0072060:CDS
AACTTGAAGAGCGTGCTCTC+TGG 0.398133 1_2:+44693002 Msa0072060:CDS
CCCCTTTCTCTGTACCCAAT+CGG 0.405775 1_2:-44695491 None:intergenic
TGGGATAGCGCATCGTATTA+AGG 0.406455 1_2:-44695559 None:intergenic
CGAGGTACACCCATTGTCAT+TGG 0.406906 1_2:-44692138 None:intergenic
TCCCTTTCAGTTTGTGCCCT+AGG 0.407081 1_2:-44693407 None:intergenic
ATCTCCAATGGGCTCGTACT+CGG 0.410861 1_2:+44691864 None:intergenic
TTCATTATTAGAACCTTTGA+AGG 0.413043 1_2:-44695358 None:intergenic
GTTCTTCGAGGGGCTTAATT+GGG 0.414560 1_2:+44695536 Msa0072060:CDS
GTACAATGTCTGTATCTTCC+CGG 0.414759 1_2:-44692295 None:intergenic
GACCTTTGTGAATTCGAGTT+GGG 0.415037 1_2:+44695594 Msa0072060:CDS
ATCATAAAGAACAAGAGTTT+GGG 0.415871 1_2:+44692813 Msa0072060:CDS
GAATGTTCATCAAGTAAAGT+TGG 0.417858 1_2:+44692546 Msa0072060:CDS
CTCTCTGGGCCAGCACAAAC+TGG 0.418662 1_2:+44693017 Msa0072060:CDS
CCAGAATCAGAACCCTGCTT+TGG 0.419048 1_2:-44692846 None:intergenic
TATATCTAAGGCATCGGAAA+TGG 0.420286 1_2:+44692221 Msa0072060:CDS
TCTCCAATGGGCTCGTACTC+GGG 0.421635 1_2:+44691865 None:intergenic
GCCCCAGGTGGTAAGAATCT+AGG 0.421684 1_2:-44695126 None:intergenic
AAACTAACAAATGGACTATC+GGG 0.421936 1_2:-44695420 None:intergenic
ATCATTAGAACCCATTCAAA+TGG 0.423949 1_2:+44692581 Msa0072060:CDS
GCAAGATCAAACTCATTTGT+TGG 0.426222 1_2:+44695225 Msa0072060:CDS
TTTGTTTGCTATTAAAGTAA+TGG 0.428001 1_2:+44693352 Msa0072060:CDS
CCCTCTCCTTTGATGATCTC+GGG 0.430280 1_2:-44695267 None:intergenic
CAACTCTACTTTACTTCCAT+TGG 0.431940 1_2:-44692643 None:intergenic
CTTTGATAAGATCCCTTGCT+TGG 0.432685 1_2:-44695443 None:intergenic
TACCTCGATCCCCACGAGTT+GGG 0.435212 1_2:+44692154 Msa0072060:CDS
TTGAATGGGTTCTAATGATT+GGG 0.439666 1_2:-44692577 None:intergenic
GAAACTAACAAATGGACTAT+CGG 0.444582 1_2:-44695421 None:intergenic
AGTCCTAGATTCTTACCACC+TGG 0.445086 1_2:+44695123 Msa0072060:CDS
TCTCGAACAAGAATGTTCTC+TGG 0.449274 1_2:-44694928 None:intergenic
AACCGATTGGGTACAGAGAA+AGG 0.450567 1_2:+44695489 Msa0072060:CDS
AAGGGAAATATTACGAATGC+TGG 0.453731 1_2:+44693424 Msa0072060:CDS
AACTTCGGACTTGTTCCATC+TGG 0.453849 1_2:-44692096 None:intergenic
ACGGTAAAATGTGCTTTATA+AGG 0.456695 1_2:+44695832 Msa0072060:three_prime_UTR
ATGAAAAGGTTATCAAAGTC+AGG 0.459032 1_2:+44692249 Msa0072060:CDS
TATTTAGAGTGTACTACAAC+AGG 0.469758 1_2:+44695660 Msa0072060:CDS
TCAAAACTAATTTACAACAT+AGG 0.479924 1_2:-44695802 None:intergenic
AGCTACACTATATCCTGAAC+TGG 0.480141 1_2:-44691953 None:intergenic
CTTGCTTGGAAACTAACAAA+TGG 0.480810 1_2:-44695429 None:intergenic
CAACAGTGGCATTGTTTCTG+TGG 0.480876 1_2:+44695728 Msa0072060:three_prime_UTR
GATACAGACATTGTACAATT+CGG 0.481886 1_2:+44692302 Msa0072060:CDS
CGGAAATGGCTGCTATGAAA+AGG 0.484378 1_2:+44692235 Msa0072060:CDS
AATTAGTTCAGAAAGATATA+CGG 0.484594 1_2:-44693318 None:intergenic
ACTTGAAGAGCGTGCTCTCT+GGG 0.489162 1_2:+44693003 Msa0072060:CDS
TTGGAGTACTTGCACATGCT+CGG 0.492127 1_2:+44694883 Msa0072060:CDS
AACATTCTTGTTCGAGAAGA+CGG 0.493896 1_2:+44694934 Msa0072060:CDS
AGCTGAAATATCTCCGGTGC+TGG 0.494013 1_2:+44692383 Msa0072060:CDS
GACATGGAGCTGCAGTTGAT+TGG 0.495502 1_2:+44695289 Msa0072060:CDS
TCCGCTGAAACTGGGATACA+AGG 0.498155 1_2:+44691996 Msa0072060:CDS
CTTGTCATGGAGTATTGTCC+TGG 0.498365 1_2:+44693503 Msa0072060:CDS
TTACTACTGTCAACATTGGA+AGG 0.503148 1_2:-44692351 None:intergenic
CAAGCAAGGGATCTTATCAA+AGG 0.504426 1_2:+44695444 Msa0072060:CDS
TTTATTCCATCTGCAGGGCC+CGG 0.504556 1_2:-44692981 None:intergenic
GGACCTTTGTGAATTCGAGT+TGG 0.510704 1_2:+44695593 Msa0072060:CDS
CTTTGATGATCTCGGGCGCT+AGG 0.512710 1_2:-44695260 None:intergenic
TTCTCTGAGATCTTCGTCAA+GGG 0.516916 1_2:+44692059 Msa0072060:CDS
TGAGCCGGTGACTTTGAAGC+AGG 0.518357 1_2:+44692182 Msa0072060:CDS
CACTTGTTTGCGAGAGATGT+TGG 0.518948 1_2:+44692925 Msa0072060:CDS
GCATAGAGTGTTGGAAGAAA+AGG 0.520558 1_2:-44693452 None:intergenic
ACGAGTTGGGATTTCTGAGC+CGG 0.520650 1_2:+44692167 Msa0072060:CDS
GACTTGCTTTCTTCCAGCAC+CGG 0.522379 1_2:-44692396 None:intergenic
ACCGATTGGGTACAGAGAAA+GGG 0.522552 1_2:+44695490 Msa0072060:CDS
TAAAGAGCCTGAAAACCGAT+TGG 0.525170 1_2:+44695476 Msa0072060:CDS
CTCCAAGAATATCAGAGGCC+GGG 0.526522 1_2:+44692277 Msa0072060:CDS
CCGATGCCTTAGATATACAT+AGG 0.527023 1_2:-44692215 None:intergenic
AACTCGAATTCACAAAGGTC+CGG 0.527294 1_2:-44695591 None:intergenic
CAAACAAGTGGAGTTGTAGC+AGG 0.528559 1_2:-44692912 None:intergenic
TATGGTAGAACACCCTTCAA+AGG 0.528632 1_2:+44695345 Msa0072060:CDS
GCCTAGGGCACAAACTGAAA+GGG 0.531959 1_2:+44693406 Msa0072060:CDS
ATTTGTTAGTTTCCAAGCAA+GGG 0.533029 1_2:+44695431 Msa0072060:CDS
TGCCTAGGGCACAAACTGAA+AGG 0.533660 1_2:+44693405 Msa0072060:CDS
TTGTTACAACCAGTTTGTGC+TGG 0.533954 1_2:-44693026 None:intergenic
GAAGATGATTTCAGAAGTGT+CGG 0.534124 1_2:-44695006 None:intergenic
TGAGTTTGATCTTGCATCTG+TGG 0.534621 1_2:-44695217 None:intergenic
GGGTAAGAAGAAACCAAAGC+AGG 0.535267 1_2:+44692833 Msa0072060:CDS
TGTTCTCTGGTTTCAAATCA+CGG 0.536426 1_2:-44694915 None:intergenic
TGCACATGTACCAGAAACCT+TGG 0.539921 1_2:-44695043 None:intergenic
CTGGAAGAAAGCAAGTCGCT+TGG 0.540370 1_2:+44692402 Msa0072060:CDS
CATTTGTTAGTTTCCAAGCA+AGG 0.540412 1_2:+44695430 Msa0072060:CDS
CTTCCATTGGTGTTACAACA+AGG 0.541296 1_2:-44692630 None:intergenic
AAAGAGCCTGAAAACCGATT+GGG 0.543386 1_2:+44695477 Msa0072060:CDS
GTGGGCTCTGCCACAAGTTG+TGG 0.543584 1_2:-44695198 None:intergenic
CTGCATTTGAGCATCTCGTA+TGG 0.544030 1_2:-44693231 None:intergenic
ATAACACCGGGCCCTGCAGA+TGG 0.544715 1_2:+44692975 Msa0072060:CDS
AAGCAAGGGATCTTATCAAA+GGG 0.546140 1_2:+44695445 Msa0072060:CDS
TCTCCAAGAATATCAGAGGC+CGG 0.547265 1_2:+44692276 Msa0072060:CDS
CAAAGGTCCGGAAGTTCTGG+TGG 0.547383 1_2:-44695579 None:intergenic
AAACAACATCCGTTCTTCGA+GGG 0.549529 1_2:+44695525 Msa0072060:CDS
CAGATCATTGCCACAACTTG+TGG 0.550134 1_2:+44695188 Msa0072060:CDS
GATCGCACATTCACAAAGCA+AGG 0.551160 1_2:+44695629 Msa0072060:CDS
CATGTACCAGAAACCTTGGC+AGG 0.552486 1_2:-44695039 None:intergenic
GCCATTTATTGATGTAGATG+AGG 0.552846 1_2:-44692742 None:intergenic
TCAAGTTTATTCCATCTGCA+GGG 0.553310 1_2:-44692986 None:intergenic
CCACCTTGTTGTAACACCAA+TGG 0.553522 1_2:+44692627 Msa0072060:CDS
CACGAAGGAAGAAGATGCCT+AGG 0.553678 1_2:+44693390 Msa0072060:CDS
GTCCTAGATTCTTACCACCT+GGG 0.554174 1_2:+44695124 Msa0072060:CDS
AAACTTGGTTGTGGAGACAT+TGG 0.554545 1_2:+44693293 Msa0072060:CDS
TCACTGATGCTAGGAGATCA+GGG 0.556404 1_2:+44692328 Msa0072060:CDS
AAGCTTCCTCCGCTGAAACT+GGG 0.558427 1_2:+44691988 Msa0072060:CDS
TACCACCTGGGGCAAAAGCA+AGG 0.560142 1_2:+44695136 Msa0072060:CDS
TAACGTCACACCTGAGTGAA+AGG 0.560894 1_2:-44694981 None:intergenic
TTTCTCTGAGATCTTCGTCA+AGG 0.561091 1_2:+44692058 Msa0072060:CDS
ATGGAGCTGCAGTTGATTGG+TGG 0.561888 1_2:+44695292 Msa0072060:CDS
AAATCTGTCATGTCTTGTCA+TGG 0.562494 1_2:+44693490 Msa0072060:CDS
ATCATCAAAGGAGAGGGACA+TGG 0.563595 1_2:+44695273 Msa0072060:CDS
GAGTTTGATCTTGCATCTGT+GGG 0.564013 1_2:-44695216 None:intergenic
CAATTAAGCCCCTCGAAGAA+CGG 0.565981 1_2:-44695534 None:intergenic
CAACATCTCTCGCAAACAAG+TGG 0.566758 1_2:-44692924 None:intergenic
TGTGCTTTATAAGGTGTAGG+AGG 0.567166 1_2:+44695841 Msa0072060:three_prime_UTR
GTACCTCGATCCCCACGAGT+TGG 0.569241 1_2:+44692153 Msa0072060:CDS
TACTACAACAGGTGGACAAG+TGG 0.569450 1_2:+44695671 Msa0072060:CDS
AAGCATGCAACTTGACAAGA+TGG 0.570439 1_2:-44695099 None:intergenic
GAGTTCAGCTGAAATATCTC+CGG 0.572526 1_2:+44692377 Msa0072060:CDS
AACAACATCCGTTCTTCGAG+GGG 0.572629 1_2:+44695526 Msa0072060:CDS
ATTCGGTAGTCACTGATGCT+AGG 0.574795 1_2:+44692319 Msa0072060:CDS
CAAAGCTCAAAGAGTAGCCA+AGG 0.577202 1_2:+44693110 Msa0072060:CDS
ACTGACATTACTCTCGTCGC+TGG 0.577572 1_2:-44693156 None:intergenic
CCCGAGATCATCAAAGGAGA+GGG 0.579283 1_2:+44695267 Msa0072060:CDS
TACTACTGCTGTAGTCACCT+TGG 0.579611 1_2:-44693127 None:intergenic
TTCTGATATAGATCCTGCCA+AGG 0.581336 1_2:+44695026 Msa0072060:CDS
AATGCCTGCTTCAAAGTCAC+CGG 0.582267 1_2:-44692186 None:intergenic
TAAACAACATCCGTTCTTCG+AGG 0.583042 1_2:+44695524 Msa0072060:CDS
GGCTCAGAAATCCCAACTCG+TGG 0.584426 1_2:-44692165 None:intergenic
ATGTTCATCAAGTAAAGTTG+GGG 0.585560 1_2:+44692548 Msa0072060:CDS
TCCTTGTATCCCAGTTTCAG+CGG 0.586814 1_2:-44691997 None:intergenic
AATAAAGCATCTACACGGAA+AGG 0.586972 1_2:+44692699 Msa0072060:CDS
CCTATGTATATCTAAGGCAT+CGG 0.587384 1_2:+44692215 Msa0072060:CDS
GCTCAGAAATCCCAACTCGT+GGG 0.587632 1_2:-44692164 None:intergenic
CTTGTGAAATTGTTGAAGCG+AGG 0.588041 1_2:+44691890 Msa0072060:CDS
ATCCCAACTCGTGGGGATCG+AGG 0.588163 1_2:-44692156 None:intergenic
CAAGATGGTTCAATGCAGAA+TGG 0.593437 1_2:-44695084 None:intergenic
ATGTTTCTCTTTGTCAACAG+TGG 0.594571 1_2:+44695714 Msa0072060:three_prime_UTR
GTAAACTGTGCATAGAGTGT+TGG 0.596126 1_2:-44693461 None:intergenic
CAGTTGCAGAAAATGAAACA+GGG 0.598118 1_2:+44692499 Msa0072060:CDS
GTTCCCGAGTACGAGCCCAT+TGG 0.599638 1_2:-44691868 None:intergenic
GCCCGAGATCATCAAAGGAG+AGG 0.600003 1_2:+44695266 Msa0072060:CDS
TTATTTGCTTCATTTGACTG+AGG 0.604064 1_2:-44692879 None:intergenic
CAATAGGCCTCACATGTCAA+AGG 0.604784 1_2:+44693193 Msa0072060:CDS
TCATTATTAGAACCTTTGAA+GGG 0.605401 1_2:-44695357 None:intergenic
AAGATGATTTCAGAAGTGTC+GGG 0.605932 1_2:-44695005 None:intergenic
GCAAGTACTCCAAAGCAAGA+AGG 0.606416 1_2:-44694873 None:intergenic
AAATGTGCTTTATAAGGTGT+AGG 0.608095 1_2:+44695838 Msa0072060:three_prime_UTR
GATTTGAGCTATCTACCAGA+TGG 0.608922 1_2:+44692081 Msa0072060:CDS
CTAGCGCCCGAGATCATCAA+AGG 0.609684 1_2:+44695261 Msa0072060:CDS
GTTCTACGTCAGAAACAGCT+TGG 0.610473 1_2:+44693539 Msa0072060:CDS
CTAAAATCCTTTGACATGTG+AGG 0.614502 1_2:-44693200 None:intergenic
AGAACATGAAGATCTCCTCC+AGG 0.614542 1_2:-44693521 None:intergenic
TTGTGAAATTGTTGAAGCGA+GGG 0.619052 1_2:+44691891 Msa0072060:CDS
TCCTAGATTCTTACCACCTG+GGG 0.624909 1_2:+44695125 Msa0072060:CDS
CGAGATGCTCAAATGCAGCA+TGG 0.626391 1_2:+44693236 Msa0072060:CDS
CCGATTGGGTACAGAGAAAG+GGG 0.626835 1_2:+44695491 Msa0072060:CDS
CTCAGAAATCCCAACTCGTG+GGG 0.627023 1_2:-44692163 None:intergenic
AGCAAAGGTAATATAACACC+GGG 0.630273 1_2:+44692963 Msa0072060:CDS
AGCTTCTCCAAGAATATCAG+AGG 0.631647 1_2:+44692272 Msa0072060:CDS
GGTAAGAAGAAACCAAAGCA+GGG 0.633251 1_2:+44692834 Msa0072060:CDS
CAGCAAAGGTAATATAACAC+CGG 0.636879 1_2:+44692962 Msa0072060:CDS
TTGTATCCCAGTTTCAGCGG+AGG 0.645256 1_2:-44691994 None:intergenic
ATCGCACATTCACAAAGCAA+GGG 0.646722 1_2:+44695630 Msa0072060:CDS
TTAGAGTGTACTACAACAGG+TGG 0.650533 1_2:+44695663 Msa0072060:CDS
TTAGTACAGTGAAAGATGCA+AGG 0.651962 1_2:+44691920 Msa0072060:CDS
ACACTATATCCTGAACTGGA+CGG 0.652069 1_2:-44691949 None:intergenic
GTCATGGAGTATTGTCCTGG+AGG 0.654376 1_2:+44693506 Msa0072060:CDS
ACGAAGGAAGAAGATGCCTA+GGG 0.660068 1_2:+44693391 Msa0072060:CDS
AACTAACAAATGGACTATCG+GGG 0.660217 1_2:-44695419 None:intergenic
CGGATGTTGTTTAATCTCTG+CGG 0.661803 1_2:-44695514 None:intergenic
GCACATTCACAAAGCAAGGG+TGG 0.664784 1_2:+44695633 Msa0072060:CDS
TGTGAAATAGAAAACAGCAA+AGG 0.665201 1_2:+44692948 Msa0072060:CDS
AAAGGTCCGGAAGTTCTGGT+GGG 0.678755 1_2:-44695578 None:intergenic
TAGGAAATAAAGCATCTACA+CGG 0.687698 1_2:+44692694 Msa0072060:CDS
AGTTGCAGAAAATGAAACAG+GGG 0.694625 1_2:+44692500 Msa0072060:CDS
CTCCCAACTCGAATTCACAA+AGG 0.703173 1_2:-44695596 None:intergenic
CCATTGGTGTTACAACAAGG+TGG 0.712169 1_2:-44692627 None:intergenic
AGCGACGAGAGTAATGTCAG+TGG 0.730559 1_2:+44693158 Msa0072060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTCCTAATTTTTTAG+GGG - chr1_2:44692685-44692704 None:intergenic 15.0%
!!! CTTTATTTCCTAATTTTTTA+GGG - chr1_2:44692686-44692705 None:intergenic 15.0%
!!! TTGAATTTTGATATGTTTAT+AGG + chr1_2:44693762-44693781 Msa0072060:intron 15.0%
!!! ATCTTATAAATTAGTTTTGT+GGG - chr1_2:44694145-44694164 None:intergenic 15.0%
!!! ATTTGTTTTTCCATTTGAAT+GGG - chr1_2:44692594-44692613 None:intergenic 20.0%
!!! GCTTTATTTCCTAATTTTTT+AGG - chr1_2:44692687-44692706 None:intergenic 20.0%
!! AATTAGTTCAGAAAGATATA+CGG - chr1_2:44693321-44693340 None:intergenic 20.0%
!!! TAATAGCAAACAAACAATTT+TGG - chr1_2:44693346-44693365 None:intergenic 20.0%
!!! TTTGTTTGCTATTAAAGTAA+TGG + chr1_2:44693352-44693371 Msa0072060:CDS 20.0%
!!! TCTTATAAATTAGTTTTGTG+GGG - chr1_2:44694144-44694163 None:intergenic 20.0%
!!! CATCTTATAAATTAGTTTTG+TGG - chr1_2:44694146-44694165 None:intergenic 20.0%
!! CAAAACTAATTTATAAGATG+AGG + chr1_2:44694146-44694165 Msa0072060:intron 20.0%
!! TATGTAAGCACTATAATAAA+AGG + chr1_2:44694172-44694191 Msa0072060:intron 20.0%
!! TAATAAAAGGTTATATGTCT+AGG + chr1_2:44694185-44694204 Msa0072060:intron 20.0%
!! TCAAAACTAATTTACAACAT+AGG - chr1_2:44695805-44695824 None:intergenic 20.0%
!!! AATTAGTTTTGATTATAGCA+CGG + chr1_2:44695813-44695832 Msa0072060:three_prime_UTR 20.0%
! TTAAAAAAGCCAATGACAAT+GGG + chr1_2:44692129-44692148 Msa0072060:CDS 25.0%
! AATGTTCATCAAGTAAAGTT+GGG + chr1_2:44692547-44692566 Msa0072060:CDS 25.0%
!!! CATTTGTTTTTCCATTTGAA+TGG - chr1_2:44692595-44692614 None:intergenic 25.0%
! ATCATAAAGAACAAGAGTTT+GGG + chr1_2:44692813-44692832 Msa0072060:CDS 25.0%
!!! TTCAATCTTTTGAAGAAACT+TGG + chr1_2:44693278-44693297 Msa0072060:CDS 25.0%
! GTATATCTTTCTGAACTAAT+TGG + chr1_2:44693320-44693339 Msa0072060:CDS 25.0%
!!! AGTAATGGACAATGAATTTT+TGG + chr1_2:44693367-44693386 Msa0072060:CDS 25.0%
!!! TTAGGATTTTGTTTTCCATT+TGG + chr1_2:44693622-44693641 Msa0072060:intron 25.0%
!! CATTCTCATCAATCATATTT+TGG + chr1_2:44693701-44693720 Msa0072060:intron 25.0%
!!! CAGAATCATATTTTTTACAG+TGG - chr1_2:44693810-44693829 None:intergenic 25.0%
! ATACACTTAAGGTTAAAGTA+TGG + chr1_2:44694030-44694049 Msa0072060:intron 25.0%
! GAACTTTCAGAATTATTTGT+TGG - chr1_2:44694389-44694408 None:intergenic 25.0%
! TTAATAAAACAATTGCTCAC+TGG + chr1_2:44694480-44694499 Msa0072060:intron 25.0%
! AGTCAATAAAATTGTAGTGA+TGG - chr1_2:44694563-44694582 None:intergenic 25.0%
! ACTTTACATGAAAACACATA+TGG + chr1_2:44694787-44694806 Msa0072060:intron 25.0%
! TCATTATTAGAACCTTTGAA+GGG - chr1_2:44695360-44695379 None:intergenic 25.0%
! TTCATTATTAGAACCTTTGA+AGG - chr1_2:44695361-44695380 None:intergenic 25.0%
GTTAAAAAAGCCAATGACAA+TGG + chr1_2:44692128-44692147 Msa0072060:CDS 30.0%
AAGAGACCTATGTATATCTA+AGG + chr1_2:44692209-44692228 Msa0072060:CDS 30.0%
ATGAAAAGGTTATCAAAGTC+AGG + chr1_2:44692249-44692268 Msa0072060:CDS 30.0%
GATACAGACATTGTACAATT+CGG + chr1_2:44692302-44692321 Msa0072060:CDS 30.0%
!!! ATTTTGGCTCAATACACTTT+TGG - chr1_2:44692460-44692479 None:intergenic 30.0%
! ATTTTCTGCAACTGCAATTT+CGG - chr1_2:44692493-44692512 None:intergenic 30.0%
GAATGTTCATCAAGTAAAGT+TGG + chr1_2:44692546-44692565 Msa0072060:CDS 30.0%
ATGTTCATCAAGTAAAGTTG+GGG + chr1_2:44692548-44692567 Msa0072060:CDS 30.0%
! TTGAATGGGTTCTAATGATT+GGG - chr1_2:44692580-44692599 None:intergenic 30.0%
! TTTGAATGGGTTCTAATGAT+TGG - chr1_2:44692581-44692600 None:intergenic 30.0%
ATCATTAGAACCCATTCAAA+TGG + chr1_2:44692581-44692600 Msa0072060:CDS 30.0%
GATTCTTCCCCTAAAAAATT+AGG + chr1_2:44692675-44692694 Msa0072060:CDS 30.0%
! TAGGAAATAAAGCATCTACA+CGG + chr1_2:44692694-44692713 Msa0072060:CDS 30.0%
TCCTCATCTACATCAATAAA+TGG + chr1_2:44692741-44692760 Msa0072060:CDS 30.0%
!! TTATGATCGATTTTACTGCT+CGG - chr1_2:44692800-44692819 None:intergenic 30.0%
GATCATAAAGAACAAGAGTT+TGG + chr1_2:44692812-44692831 Msa0072060:CDS 30.0%
TTATTTGCTTCATTTGACTG+AGG - chr1_2:44692882-44692901 None:intergenic 30.0%
TGTGAAATAGAAAACAGCAA+AGG + chr1_2:44692948-44692967 Msa0072060:CDS 30.0%
GTTGCAAAAGTGAAAAAGAA+TGG + chr1_2:44693059-44693078 Msa0072060:CDS 30.0%
! ACATGTCAAAGGATTTTAGA+TGG + chr1_2:44693204-44693223 Msa0072060:CDS 30.0%
CATAACTAAGAACTACTGTT+CGG + chr1_2:44693592-44693611 Msa0072060:intron 30.0%
CTACTGTTCGGTAATATATT+AGG + chr1_2:44693604-44693623 Msa0072060:intron 30.0%
ATGATACAAATGTGACCAAA+TGG - chr1_2:44693640-44693659 None:intergenic 30.0%
AATCAAAATTCAAGTGTGCT+GGG - chr1_2:44693924-44693943 None:intergenic 30.0%
AGGCAAGATTTCATCATTAT+AGG - chr1_2:44693999-44694018 None:intergenic 30.0%
! ATGGTTTGTATGTAAACTCA+TGG + chr1_2:44694049-44694068 Msa0072060:intron 30.0%
TATGTAAACTCATGGAACAA+TGG + chr1_2:44694057-44694076 Msa0072060:intron 30.0%
ATGTAAACTCATGGAACAAT+GGG + chr1_2:44694058-44694077 Msa0072060:intron 30.0%
! AATAATTCTGAAAGTTCCCT+AGG + chr1_2:44694392-44694411 Msa0072060:intron 30.0%
AAAAAATTGCATGCACATAG+GGG - chr1_2:44694634-44694653 None:intergenic 30.0%
CAAAAAATTGCATGCACATA+GGG - chr1_2:44694635-44694654 None:intergenic 30.0%
TCAAAAAATTGCATGCACAT+AGG - chr1_2:44694636-44694655 None:intergenic 30.0%
GACAAAATTGCAGATCAAAA+GGG - chr1_2:44694745-44694764 None:intergenic 30.0%
TGACAAAATTGCAGATCAAA+AGG - chr1_2:44694746-44694765 None:intergenic 30.0%
TTCATGTAAAGTAGAAGGTT+TGG - chr1_2:44694779-44694798 None:intergenic 30.0%
! GTGTTTTCATGTAAAGTAGA+AGG - chr1_2:44694784-44694803 None:intergenic 30.0%
ACATGAAAACACATATGGAT+TGG + chr1_2:44694792-44694811 Msa0072060:intron 30.0%
! TTTCTGTACGAGCTTTTATA+TGG + chr1_2:44695327-44695346 Msa0072060:CDS 30.0%
!! AAACTAACAAATGGACTATC+GGG - chr1_2:44695423-44695442 None:intergenic 30.0%
!! GAAACTAACAAATGGACTAT+CGG - chr1_2:44695424-44695443 None:intergenic 30.0%
! ATTTGTTAGTTTCCAAGCAA+GGG + chr1_2:44695431-44695450 Msa0072060:CDS 30.0%
! TATTTAGAGTGTACTACAAC+AGG + chr1_2:44695660-44695679 Msa0072060:CDS 30.0%
!!! TGGAATTTGAGTTGTTTTAG+AGG + chr1_2:44695691-44695710 Msa0072060:CDS 30.0%
TACAACATAGGCTTACATAA+TGG - chr1_2:44695793-44695812 None:intergenic 30.0%
ACGGTAAAATGTGCTTTATA+AGG + chr1_2:44695832-44695851 Msa0072060:three_prime_UTR 30.0%
AAATGTGCTTTATAAGGTGT+AGG + chr1_2:44695838-44695857 Msa0072060:three_prime_UTR 30.0%
TTGTGAAATTGTTGAAGCGA+GGG + chr1_2:44691891-44691910 Msa0072060:CDS 35.0%
TTAGTACAGTGAAAGATGCA+AGG + chr1_2:44691920-44691939 Msa0072060:CDS 35.0%
! TTTAACGCGCTTTTCAACTT+CGG - chr1_2:44692114-44692133 None:intergenic 35.0%
! CCTATGTATATCTAAGGCAT+CGG + chr1_2:44692215-44692234 Msa0072060:CDS 35.0%
!! TATATCTAAGGCATCGGAAA+TGG + chr1_2:44692221-44692240 Msa0072060:CDS 35.0%
TTACTACTGTCAACATTGGA+AGG - chr1_2:44692354-44692373 None:intergenic 35.0%
! CCTTTTACTACTGTCAACAT+TGG - chr1_2:44692358-44692377 None:intergenic 35.0%
CCAATGTTGACAGTAGTAAA+AGG + chr1_2:44692355-44692374 Msa0072060:CDS 35.0%
! TTTCGGAAGACTGAACATTT+TGG - chr1_2:44692476-44692495 None:intergenic 35.0%
CAGTTGCAGAAAATGAAACA+GGG + chr1_2:44692499-44692518 Msa0072060:CDS 35.0%
AGTTGCAGAAAATGAAACAG+GGG + chr1_2:44692500-44692519 Msa0072060:CDS 35.0%
TTCATTGATGCGAAGTGATT+TGG + chr1_2:44692524-44692543 Msa0072060:CDS 35.0%
CAACTCTACTTTACTTCCAT+TGG - chr1_2:44692646-44692665 None:intergenic 35.0%
! TTAGGGGAAGAATCTTTTTC+AGG - chr1_2:44692669-44692688 None:intergenic 35.0%
! AATAAAGCATCTACACGGAA+AGG + chr1_2:44692699-44692718 Msa0072060:CDS 35.0%
GCCATTTATTGATGTAGATG+AGG - chr1_2:44692745-44692764 None:intergenic 35.0%
!! TATGATCGATTTTACTGCTC+GGG - chr1_2:44692799-44692818 None:intergenic 35.0%
CAGCAAAGGTAATATAACAC+CGG + chr1_2:44692962-44692981 Msa0072060:CDS 35.0%
AGCAAAGGTAATATAACACC+GGG + chr1_2:44692963-44692982 Msa0072060:CDS 35.0%
TCAAGTTTATTCCATCTGCA+GGG - chr1_2:44692989-44693008 None:intergenic 35.0%
! TTCAAGTTTATTCCATCTGC+AGG - chr1_2:44692990-44693009 None:intergenic 35.0%
!!! AATGTCAGTGGTTCTAGTTT+TGG + chr1_2:44693170-44693189 Msa0072060:CDS 35.0%
CTAAAATCCTTTGACATGTG+AGG - chr1_2:44693203-44693222 None:intergenic 35.0%
!! CTTTTGAAGAAACTTGGTTG+TGG + chr1_2:44693284-44693303 Msa0072060:CDS 35.0%
!!! ACAATGAATTTTTGGCACGA+AGG + chr1_2:44693375-44693394 Msa0072060:CDS 35.0%
AAGGGAAATATTACGAATGC+TGG + chr1_2:44693424-44693443 Msa0072060:CDS 35.0%
AAATCTGTCATGTCTTGTCA+TGG + chr1_2:44693490-44693509 Msa0072060:CDS 35.0%
!!! CATATTTTGGCATGTGTTTC+TGG + chr1_2:44693714-44693733 Msa0072060:intron 35.0%
GAATCAAAATTCAAGTGTGC+TGG - chr1_2:44693925-44693944 None:intergenic 35.0%
AGTGAGTGGATACTTAACAA+CGG - chr1_2:44693954-44693973 None:intergenic 35.0%
ATGATGAAATCTTGCCTGTA+CGG + chr1_2:44694002-44694021 Msa0072060:intron 35.0%
ATTATTGCACACCAAATGCA+TGG - chr1_2:44694095-44694114 None:intergenic 35.0%
!! ATGCATTTGGTGTGCAATAA+TGG + chr1_2:44694094-44694113 Msa0072060:intron 35.0%
!! TGCATTTGGTGTGCAATAAT+GGG + chr1_2:44694095-44694114 Msa0072060:intron 35.0%
!! AATAATGGGTGGCTCAATAA+AGG + chr1_2:44694109-44694128 Msa0072060:intron 35.0%
TATGTCTGTCTTCATTGCAA+TGG - chr1_2:44694304-44694323 None:intergenic 35.0%
! TCGCAATTAAGGCAGATTTT+TGG + chr1_2:44694358-44694377 Msa0072060:intron 35.0%
ACAAACAATTGCTTCTCCTA+GGG - chr1_2:44694411-44694430 None:intergenic 35.0%
AACAAACAATTGCTTCTCCT+AGG - chr1_2:44694412-44694431 None:intergenic 35.0%
TGACTTTATGTAGATTGCAC+TGG + chr1_2:44694578-44694597 Msa0072060:intron 35.0%
GAAGTTGCAAATTGTTTCGA+TGG + chr1_2:44694702-44694721 Msa0072060:intron 35.0%
! TGTTCTCTGGTTTCAAATCA+CGG - chr1_2:44694918-44694937 None:intergenic 35.0%
AACATTCTTGTTCGAGAAGA+CGG + chr1_2:44694934-44694953 Msa0072060:CDS 35.0%
!! AAGATGATTTCAGAAGTGTC+GGG - chr1_2:44695008-44695027 None:intergenic 35.0%
! GAAGATGATTTCAGAAGTGT+CGG - chr1_2:44695009-44695028 None:intergenic 35.0%
GCAAGATCAAACTCATTTGT+TGG + chr1_2:44695225-44695244 Msa0072060:CDS 35.0%
!! AACTAACAAATGGACTATCG+GGG - chr1_2:44695422-44695441 None:intergenic 35.0%
CTTGCTTGGAAACTAACAAA+TGG - chr1_2:44695432-44695451 None:intergenic 35.0%
! CATTTGTTAGTTTCCAAGCA+AGG + chr1_2:44695430-44695449 Msa0072060:CDS 35.0%
AAGCAAGGGATCTTATCAAA+GGG + chr1_2:44695445-44695464 Msa0072060:CDS 35.0%
ATGTTTCTCTTTGTCAACAG+TGG + chr1_2:44695714-44695733 Msa0072060:three_prime_UTR 35.0%
!! TGTTTCTGTGGATTCGTTTT+CGG + chr1_2:44695740-44695759 Msa0072060:three_prime_UTR 35.0%
CTTGTGAAATTGTTGAAGCG+AGG + chr1_2:44691890-44691909 Msa0072060:CDS 40.0%
ACACTATATCCTGAACTGGA+CGG - chr1_2:44691952-44691971 None:intergenic 40.0%
AGCTACACTATATCCTGAAC+TGG - chr1_2:44691956-44691975 None:intergenic 40.0%
!! TTTCTCTGAGATCTTCGTCA+AGG + chr1_2:44692058-44692077 Msa0072060:CDS 40.0%
!! TTCTCTGAGATCTTCGTCAA+GGG + chr1_2:44692059-44692078 Msa0072060:CDS 40.0%
GATTTGAGCTATCTACCAGA+TGG + chr1_2:44692081-44692100 Msa0072060:CDS 40.0%
CCGATGCCTTAGATATACAT+AGG - chr1_2:44692218-44692237 None:intergenic 40.0%
AGCTTCTCCAAGAATATCAG+AGG + chr1_2:44692272-44692291 Msa0072060:CDS 40.0%
GTACAATGTCTGTATCTTCC+CGG - chr1_2:44692298-44692317 None:intergenic 40.0%
GAGTTCAGCTGAAATATCTC+CGG + chr1_2:44692377-44692396 Msa0072060:CDS 40.0%
GCAGTTGCAGAAAATGAAAC+AGG + chr1_2:44692498-44692517 Msa0072060:CDS 40.0%
!! CTTCCATTGGTGTTACAACA+AGG - chr1_2:44692633-44692652 None:intergenic 40.0%
!! ATGATCGATTTTACTGCTCG+GGG - chr1_2:44692798-44692817 None:intergenic 40.0%
GGTAAGAAGAAACCAAAGCA+GGG + chr1_2:44692834-44692853 Msa0072060:CDS 40.0%
TTGTTACAACCAGTTTGTGC+TGG - chr1_2:44693029-44693048 None:intergenic 40.0%
!!! GTGGTTCTAGTTTTGGCAAT+AGG + chr1_2:44693177-44693196 Msa0072060:CDS 40.0%
! CAAATGCAGCATGGAGTATT+AGG + chr1_2:44693245-44693264 Msa0072060:CDS 40.0%
AAACTTGGTTGTGGAGACAT+TGG + chr1_2:44693293-44693312 Msa0072060:CDS 40.0%
!! GCATAGAGTGTTGGAAGAAA+AGG - chr1_2:44693455-44693474 None:intergenic 40.0%
GTAAACTGTGCATAGAGTGT+TGG - chr1_2:44693464-44693483 None:intergenic 40.0%
TTAGTTATGTACCTTGCTGC+TGG - chr1_2:44693581-44693600 None:intergenic 40.0%
TTTAGCCAGTGCATTCAATG+AGG + chr1_2:44693737-44693756 Msa0072060:intron 40.0%
CAAAACCTCATTGAATGCAC+TGG - chr1_2:44693745-44693764 None:intergenic 40.0%
AAGTATCCACTCACTCTTTC+TGG + chr1_2:44693959-44693978 Msa0072060:intron 40.0%
TGATGAAATCTTGCCTGTAC+GGG + chr1_2:44694003-44694022 Msa0072060:intron 40.0%
!! ACTCATGGAACAATGGGTTA+TGG + chr1_2:44694064-44694083 Msa0072060:intron 40.0%
!! CTCATGGAACAATGGGTTAT+GGG + chr1_2:44694065-44694084 Msa0072060:intron 40.0%
!! ATTTGGTGTGCAATAATGGG+TGG + chr1_2:44694098-44694117 Msa0072060:intron 40.0%
TGCAATGAAGACAGACATAG+TGG + chr1_2:44694305-44694324 Msa0072060:intron 40.0%
CTTAATTGCGACTAACTCTG+CGG - chr1_2:44694349-44694368 None:intergenic 40.0%
TCTACTAAACAGTGTGGAAC+TGG - chr1_2:44694672-44694691 None:intergenic 40.0%
CTACTGTCTACTAAACAGTG+TGG - chr1_2:44694678-44694697 None:intergenic 40.0%
ACGTAAAACCTGCACATACA+AGG - chr1_2:44694844-44694863 None:intergenic 40.0%
TCTCGAACAAGAATGTTCTC+TGG - chr1_2:44694931-44694950 None:intergenic 40.0%
!! CTGATTTTGACCTTTCACTC+AGG + chr1_2:44694971-44694990 Msa0072060:CDS 40.0%
TTCTGATATAGATCCTGCCA+AGG + chr1_2:44695026-44695045 Msa0072060:CDS 40.0%
CAAGATGGTTCAATGCAGAA+TGG - chr1_2:44695087-44695106 None:intergenic 40.0%
AAGCATGCAACTTGACAAGA+TGG - chr1_2:44695102-44695121 None:intergenic 40.0%
GAGTTTGATCTTGCATCTGT+GGG - chr1_2:44695219-44695238 None:intergenic 40.0%
TGAGTTTGATCTTGCATCTG+TGG - chr1_2:44695220-44695239 None:intergenic 40.0%
TATGGTAGAACACCCTTCAA+AGG + chr1_2:44695345-44695364 Msa0072060:CDS 40.0%
! GAGATTTTGCAACACGACAT+TGG - chr1_2:44695394-44695413 None:intergenic 40.0%
CTTTGATAAGATCCCTTGCT+TGG - chr1_2:44695446-44695465 None:intergenic 40.0%
CAAGCAAGGGATCTTATCAA+AGG + chr1_2:44695444-44695463 Msa0072060:CDS 40.0%
TAAAGAGCCTGAAAACCGAT+TGG + chr1_2:44695476-44695495 Msa0072060:CDS 40.0%
AAAGAGCCTGAAAACCGATT+GGG + chr1_2:44695477-44695496 Msa0072060:CDS 40.0%
! CGGATGTTGTTTAATCTCTG+CGG - chr1_2:44695517-44695536 None:intergenic 40.0%
TAAACAACATCCGTTCTTCG+AGG + chr1_2:44695524-44695543 Msa0072060:CDS 40.0%
AAACAACATCCGTTCTTCGA+GGG + chr1_2:44695525-44695544 Msa0072060:CDS 40.0%
AACTCGAATTCACAAAGGTC+CGG - chr1_2:44695594-44695613 None:intergenic 40.0%
! GACCTTTGTGAATTCGAGTT+GGG + chr1_2:44695594-44695613 Msa0072060:CDS 40.0%
ATCGCACATTCACAAAGCAA+GGG + chr1_2:44695630-44695649 Msa0072060:CDS 40.0%
TTAGAGTGTACTACAACAGG+TGG + chr1_2:44695663-44695682 Msa0072060:CDS 40.0%
! GTTTCTGTGGATTCGTTTTC+GGG + chr1_2:44695741-44695760 Msa0072060:three_prime_UTR 40.0%
TGTGCTTTATAAGGTGTAGG+AGG + chr1_2:44695841-44695860 Msa0072060:three_prime_UTR 40.0%
AGGATATATCCGTCCAGTTC+AGG + chr1_2:44691940-44691959 Msa0072060:CDS 45.0%
TCCTTGTATCCCAGTTTCAG+CGG - chr1_2:44692000-44692019 None:intergenic 45.0%
! AACTTCGGACTTGTTCCATC+TGG - chr1_2:44692099-44692118 None:intergenic 45.0%
AATGCCTGCTTCAAAGTCAC+CGG - chr1_2:44692189-44692208 None:intergenic 45.0%
CGGAAATGGCTGCTATGAAA+AGG + chr1_2:44692235-44692254 Msa0072060:CDS 45.0%
TCTCCAAGAATATCAGAGGC+CGG + chr1_2:44692276-44692295 Msa0072060:CDS 45.0%
ATTCGGTAGTCACTGATGCT+AGG + chr1_2:44692319-44692338 Msa0072060:CDS 45.0%
TCACTGATGCTAGGAGATCA+GGG + chr1_2:44692328-44692347 Msa0072060:CDS 45.0%
!! CCATTGGTGTTACAACAAGG+TGG - chr1_2:44692630-44692649 None:intergenic 45.0%
! CCACCTTGTTGTAACACCAA+TGG + chr1_2:44692627-44692646 Msa0072060:CDS 45.0%
!! TGATCGATTTTACTGCTCGG+GGG - chr1_2:44692797-44692816 None:intergenic 45.0%
GGGTAAGAAGAAACCAAAGC+AGG + chr1_2:44692833-44692852 Msa0072060:CDS 45.0%
CAAACAAGTGGAGTTGTAGC+AGG - chr1_2:44692915-44692934 None:intergenic 45.0%
CAACATCTCTCGCAAACAAG+TGG - chr1_2:44692927-44692946 None:intergenic 45.0%
CACTTGTTTGCGAGAGATGT+TGG + chr1_2:44692925-44692944 Msa0072060:CDS 45.0%
CAAAGCTCAAAGAGTAGCCA+AGG + chr1_2:44693110-44693129 Msa0072060:CDS 45.0%
TACTACTGCTGTAGTCACCT+TGG - chr1_2:44693130-44693149 None:intergenic 45.0%
CAATAGGCCTCACATGTCAA+AGG + chr1_2:44693193-44693212 Msa0072060:CDS 45.0%
CTGCATTTGAGCATCTCGTA+TGG - chr1_2:44693234-44693253 None:intergenic 45.0%
ACGAAGGAAGAAGATGCCTA+GGG + chr1_2:44693391-44693410 Msa0072060:CDS 45.0%
!! CTTGTCATGGAGTATTGTCC+TGG + chr1_2:44693503-44693522 Msa0072060:CDS 45.0%
AGAACATGAAGATCTCCTCC+AGG - chr1_2:44693524-44693543 None:intergenic 45.0%
GTTCTACGTCAGAAACAGCT+TGG + chr1_2:44693539-44693558 Msa0072060:CDS 45.0%
!! GTTTTTCAGAACCAGCAGCA+AGG + chr1_2:44693567-44693586 Msa0072060:CDS 45.0%
CGCACTGTTGCAGATTGTAT+AGG + chr1_2:44693869-44693888 Msa0072060:intron 45.0%
! ATTCAAGTGTGCTGGGTTGA+GGG - chr1_2:44693917-44693936 None:intergenic 45.0%
AATTCAAGTGTGCTGGGTTG+AGG - chr1_2:44693918-44693937 None:intergenic 45.0%
ATCCACTCACTCTTTCTGGA+TGG + chr1_2:44693963-44693982 Msa0072060:intron 45.0%
ATCCATCCAGAAAGAGTGAG+TGG - chr1_2:44693968-44693987 None:intergenic 45.0%
TAAGTGTATGTCACCCGTAC+AGG - chr1_2:44694019-44694038 None:intergenic 45.0%
GTACGGGTGACATACACTTA+AGG + chr1_2:44694019-44694038 Msa0072060:intron 45.0%
TTGCACACCAAATGCATGGT+GGG - chr1_2:44694091-44694110 None:intergenic 45.0%
ATTGCACACCAAATGCATGG+TGG - chr1_2:44694092-44694111 None:intergenic 45.0%
CGCAGAGTTAGTCGCAATTA+AGG + chr1_2:44694347-44694366 Msa0072060:intron 45.0%
TGCTGAAGTCCTTCTTGCTT+TGG + chr1_2:44694864-44694883 Msa0072060:CDS 45.0%
GCAAGTACTCCAAAGCAAGA+AGG - chr1_2:44694876-44694895 None:intergenic 45.0%
! TTGGAGTACTTGCACATGCT+CGG + chr1_2:44694883-44694902 Msa0072060:CDS 45.0%
TAACGTCACACCTGAGTGAA+AGG - chr1_2:44694984-44695003 None:intergenic 45.0%
ATAGATCCTGCCAAGGTTTC+TGG + chr1_2:44695033-44695052 Msa0072060:CDS 45.0%
TGCACATGTACCAGAAACCT+TGG - chr1_2:44695046-44695065 None:intergenic 45.0%
AGTCCTAGATTCTTACCACC+TGG + chr1_2:44695123-44695142 Msa0072060:CDS 45.0%
GTCCTAGATTCTTACCACCT+GGG + chr1_2:44695124-44695143 Msa0072060:CDS 45.0%
TCCTAGATTCTTACCACCTG+GGG + chr1_2:44695125-44695144 Msa0072060:CDS 45.0%
CAGATCATTGCCACAACTTG+TGG + chr1_2:44695188-44695207 Msa0072060:CDS 45.0%
! TCCCTCTCCTTTGATGATCT+CGG - chr1_2:44695271-44695290 None:intergenic 45.0%
ATCATCAAAGGAGAGGGACA+TGG + chr1_2:44695273-44695292 Msa0072060:CDS 45.0%
!!! GCAGTTGATTGGTGGACTTT+TGG + chr1_2:44695300-44695319 Msa0072060:CDS 45.0%
!! TCTGTACCCAATCGGTTTTC+AGG - chr1_2:44695486-44695505 None:intergenic 45.0%
AACCGATTGGGTACAGAGAA+AGG + chr1_2:44695489-44695508 Msa0072060:CDS 45.0%
ACCGATTGGGTACAGAGAAA+GGG + chr1_2:44695490-44695509 Msa0072060:CDS 45.0%
AACAACATCCGTTCTTCGAG+GGG + chr1_2:44695526-44695545 Msa0072060:CDS 45.0%
CAATTAAGCCCCTCGAAGAA+CGG - chr1_2:44695537-44695556 None:intergenic 45.0%
GTTCTTCGAGGGGCTTAATT+GGG + chr1_2:44695536-44695555 Msa0072060:CDS 45.0%
TGGGATAGCGCATCGTATTA+AGG - chr1_2:44695562-44695581 None:intergenic 45.0%
GGACCTTTGTGAATTCGAGT+TGG + chr1_2:44695593-44695612 Msa0072060:CDS 45.0%
CTCCCAACTCGAATTCACAA+AGG - chr1_2:44695599-44695618 None:intergenic 45.0%
GATCGCACATTCACAAAGCA+AGG + chr1_2:44695629-44695648 Msa0072060:CDS 45.0%
TACTACAACAGGTGGACAAG+TGG + chr1_2:44695671-44695690 Msa0072060:CDS 45.0%
!! CAACAGTGGCATTGTTTCTG+TGG + chr1_2:44695728-44695747 Msa0072060:three_prime_UTR 45.0%
!!! TGGATTCGTTTTCGGGTCTA+TGG + chr1_2:44695748-44695767 Msa0072060:three_prime_UTR 45.0%
!!! GGATTCGTTTTCGGGTCTAT+GGG + chr1_2:44695749-44695768 Msa0072060:three_prime_UTR 45.0%
AAGCTTCCTCCGCTGAAACT+GGG + chr1_2:44691988-44692007 Msa0072060:CDS 50.0%
TTGTATCCCAGTTTCAGCGG+AGG - chr1_2:44691997-44692016 None:intergenic 50.0%
TCCGCTGAAACTGGGATACA+AGG + chr1_2:44691996-44692015 Msa0072060:CDS 50.0%
CGAGGTACACCCATTGTCAT+TGG - chr1_2:44692141-44692160 None:intergenic 50.0%
CTCAGAAATCCCAACTCGTG+GGG - chr1_2:44692166-44692185 None:intergenic 50.0%
GCTCAGAAATCCCAACTCGT+GGG - chr1_2:44692167-44692186 None:intergenic 50.0%
! ACGAGTTGGGATTTCTGAGC+CGG + chr1_2:44692167-44692186 Msa0072060:CDS 50.0%
CTCCAAGAATATCAGAGGCC+GGG + chr1_2:44692277-44692296 Msa0072060:CDS 50.0%
TTCCCGGCCTCTGATATTCT+TGG - chr1_2:44692282-44692301 None:intergenic 50.0%
GTCACTGATGCTAGGAGATC+AGG + chr1_2:44692327-44692346 Msa0072060:CDS 50.0%
AGCTGAAATATCTCCGGTGC+TGG + chr1_2:44692383-44692402 Msa0072060:CDS 50.0%
! GACTTGCTTTCTTCCAGCAC+CGG - chr1_2:44692399-44692418 None:intergenic 50.0%
CTGGAAGAAAGCAAGTCGCT+TGG + chr1_2:44692402-44692421 Msa0072060:CDS 50.0%
CCAGAATCAGAACCCTGCTT+TGG - chr1_2:44692849-44692868 None:intergenic 50.0%
! CCAAAGCAGGGTTCTGATTC+TGG + chr1_2:44692846-44692865 Msa0072060:CDS 50.0%
TTTATTCCATCTGCAGGGCC+CGG - chr1_2:44692984-44693003 None:intergenic 50.0%
! AACTTGAAGAGCGTGCTCTC+TGG + chr1_2:44693002-44693021 Msa0072060:CDS 50.0%
! ACTTGAAGAGCGTGCTCTCT+GGG + chr1_2:44693003-44693022 Msa0072060:CDS 50.0%
ACTGACATTACTCTCGTCGC+TGG - chr1_2:44693159-44693178 None:intergenic 50.0%
AGCGACGAGAGTAATGTCAG+TGG + chr1_2:44693158-44693177 Msa0072060:CDS 50.0%
CGAGATGCTCAAATGCAGCA+TGG + chr1_2:44693236-44693255 Msa0072060:CDS 50.0%
CACGAAGGAAGAAGATGCCT+AGG + chr1_2:44693390-44693409 Msa0072060:CDS 50.0%
TGCCTAGGGCACAAACTGAA+AGG + chr1_2:44693405-44693424 Msa0072060:CDS 50.0%
GCCTAGGGCACAAACTGAAA+GGG + chr1_2:44693406-44693425 Msa0072060:CDS 50.0%
TCCCTTTCAGTTTGTGCCCT+AGG - chr1_2:44693410-44693429 None:intergenic 50.0%
!! GTCATGGAGTATTGTCCTGG+AGG + chr1_2:44693506-44693525 Msa0072060:CDS 50.0%
! TTCAAGTGTGCTGGGTTGAG+GGG - chr1_2:44693916-44693935 None:intergenic 50.0%
TTATGGGCCCACCATGCATT+TGG + chr1_2:44694081-44694100 Msa0072060:intron 50.0%
!! CTTAAGTGTGCGGACTAGAG+GGG - chr1_2:44694231-44694250 None:intergenic 50.0%
!! CCTTAAGTGTGCGGACTAGA+GGG - chr1_2:44694232-44694251 None:intergenic 50.0%
CAATCCTCGCCTTAAGTGTG+CGG - chr1_2:44694241-44694260 None:intergenic 50.0%
GCACACTTAAGGCGAGGATT+GGG + chr1_2:44694240-44694259 Msa0072060:intron 50.0%
CTGCGGCTGCACTATGTTAT+TGG - chr1_2:44694332-44694351 None:intergenic 50.0%
CCTGCACATACAAGGTTCTC+TGG - chr1_2:44694836-44694855 None:intergenic 50.0%
CCAGAGAACCTTGTATGTGC+AGG + chr1_2:44694833-44694852 Msa0072060:intron 50.0%
CATGTACCAGAAACCTTGGC+AGG - chr1_2:44695042-44695061 None:intergenic 50.0%
!! AGTTTCCTTGCTTTTGCCCC+AGG - chr1_2:44695144-44695163 None:intergenic 50.0%
! CCCTCTCCTTTGATGATCTC+GGG - chr1_2:44695270-44695289 None:intergenic 50.0%
CCCGAGATCATCAAAGGAGA+GGG + chr1_2:44695267-44695286 Msa0072060:CDS 50.0%
GACATGGAGCTGCAGTTGAT+TGG + chr1_2:44695289-44695308 Msa0072060:CDS 50.0%
ATGGAGCTGCAGTTGATTGG+TGG + chr1_2:44695292-44695311 Msa0072060:CDS 50.0%
CCCCTTTCTCTGTACCCAAT+CGG - chr1_2:44695494-44695513 None:intergenic 50.0%
CCGATTGGGTACAGAGAAAG+GGG + chr1_2:44695491-44695510 Msa0072060:CDS 50.0%
CGTTCTTCGAGGGGCTTAAT+TGG + chr1_2:44695535-44695554 Msa0072060:CDS 50.0%
! AAAGGTCCGGAAGTTCTGGT+GGG - chr1_2:44695581-44695600 None:intergenic 50.0%
TCACAAAGGTCCGGAAGTTC+TGG - chr1_2:44695585-44695604 None:intergenic 50.0%
GCACATTCACAAAGCAAGGG+TGG + chr1_2:44695633-44695652 Msa0072060:CDS 50.0%
GAAGCTTCCTCCGCTGAAAC+TGG + chr1_2:44691987-44692006 Msa0072060:CDS 55.0%
TACCTCGATCCCCACGAGTT+GGG + chr1_2:44692154-44692173 Msa0072060:CDS 55.0%
GGCTCAGAAATCCCAACTCG+TGG - chr1_2:44692168-44692187 None:intergenic 55.0%
!! TGAGCCGGTGACTTTGAAGC+AGG + chr1_2:44692182-44692201 Msa0072060:CDS 55.0%
! ATTTTACTGCTCGGGGGCTG+TGG - chr1_2:44692791-44692810 None:intergenic 55.0%
! TCAAGTGTGCTGGGTTGAGG+GGG - chr1_2:44693915-44693934 None:intergenic 55.0%
CCCTCTAGTCCGCACACTTA+AGG + chr1_2:44694229-44694248 Msa0072060:intron 55.0%
!! GCCTTAAGTGTGCGGACTAG+AGG - chr1_2:44694233-44694252 None:intergenic 55.0%
TAGTCCGCACACTTAAGGCG+AGG + chr1_2:44694234-44694253 Msa0072060:intron 55.0%
CGCACACTTAAGGCGAGGAT+TGG + chr1_2:44694239-44694258 Msa0072060:intron 55.0%
GCCCCAGGTGGTAAGAATCT+AGG - chr1_2:44695129-44695148 None:intergenic 55.0%
TACCACCTGGGGCAAAAGCA+AGG + chr1_2:44695136-44695155 Msa0072060:CDS 55.0%
!! TTCCTTGCTTTTGCCCCAGG+TGG - chr1_2:44695141-44695160 None:intergenic 55.0%
! CTTTGATGATCTCGGGCGCT+AGG - chr1_2:44695263-44695282 None:intergenic 55.0%
CTAGCGCCCGAGATCATCAA+AGG + chr1_2:44695261-44695280 Msa0072060:CDS 55.0%
GCCCGAGATCATCAAAGGAG+AGG + chr1_2:44695266-44695285 Msa0072060:CDS 55.0%
CGCTATCCCACCAGAACTTC+CGG + chr1_2:44695572-44695591 Msa0072060:CDS 55.0%
! CAAAGGTCCGGAAGTTCTGG+TGG - chr1_2:44695582-44695601 None:intergenic 55.0%
GTACCTCGATCCCCACGAGT+TGG + chr1_2:44692153-44692172 Msa0072060:CDS 60.0%
ATCCCAACTCGTGGGGATCG+AGG - chr1_2:44692159-44692178 None:intergenic 60.0%
ATAACACCGGGCCCTGCAGA+TGG + chr1_2:44692975-44692994 Msa0072060:CDS 60.0%
CTCTCTGGGCCAGCACAAAC+TGG + chr1_2:44693017-44693036 Msa0072060:CDS 60.0%
! CGGACTAGAGGGGATGGGTT+TGG - chr1_2:44694221-44694240 None:intergenic 60.0%
!! GTGTGCGGACTAGAGGGGAT+GGG - chr1_2:44694226-44694245 None:intergenic 60.0%
!! AGTGTGCGGACTAGAGGGGA+TGG - chr1_2:44694227-44694246 None:intergenic 60.0%
GTGGGCTCTGCCACAAGTTG+TGG - chr1_2:44695201-44695220 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 44691871 44695879 44691871 ID=Msa0072060;Name=Msa0072060
chr1_2 mRNA 44691871 44695879 44691871 ID=Msa0072060-mRNA-1;Parent=Msa0072060;Name=Msa0072060-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|169|857
chr1_2 exon 44691871 44693588 44691871 ID=Msa0072060-mRNA-1:exon:13454;Parent=Msa0072060-mRNA-1
chr1_2 exon 44694855 44695879 44694855 ID=Msa0072060-mRNA-1:exon:13455;Parent=Msa0072060-mRNA-1
chr1_2 CDS 44691871 44693588 44691871 ID=Msa0072060-mRNA-1:cds;Parent=Msa0072060-mRNA-1
chr1_2 CDS 44694855 44695710 44694855 ID=Msa0072060-mRNA-1:cds;Parent=Msa0072060-mRNA-1
chr1_2 three_prime_UTR 44695711 44695879 44695711 ID=Msa0072060-mRNA-1:three_prime_utr;Parent=Msa0072060-mRNA-1
Gene Sequence

>Msa0072060

ATGGGCTCGTACTCGGGAACTTGTGAAATTGTTGAAGCGAGGGATGACATTAGTACAGTGAAAGATGCAAGGATATATCCGTCCAGTTCAGGATATAGTGTAGCTGAGAAAAATCAGAAGCTTCCTCCGCTGAAACTGGGATACAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAAACAATTTCTCTGAGATCTTCGTCAAGGGATTTGAGCTATCTACCAGATGGAACAAGTCCGAAGTTGAAAAGCGCGTTAAAAAAGCCAATGACAATGGGTGTACCTCGATCCCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAGGAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTAGTCACTGATGCTAGGAGATCAGGGCCTTCCAATGTTGACAGTAGTAAAAGGAGTTCAGCTGAAATATCTCCGGTGCTGGAAGAAAGCAAGTCGCTTGGCTTGAATAAAGAATCACAGTCTCTTCAAACTTCCAAAAGTGTATTGAGCCAAAATGTTCAGTCTTCCGAAATTGCAGTTGCAGAAAATGAAACAGGGGCTTCATTGATGCGAAGTGATTTGGAATGTTCATCAAGTAAAGTTGGGGTTTCATCCCAATCATTAGAACCCATTCAAATGGAAAAACAAATGTCTGCTTCTTCTCCACCTTGTTGTAACACCAATGGAAGTAAAGTAGAGTTGCCTGAAAAAGATTCTTCCCCTAAAAAATTAGGAAATAAAGCATCTACACGGAAAGGTATGTTGCAAACAACATCTTCCTCATCTACATCAATAAATGGCAATAGAGTGTGTAAACTTTCGCGCCACAGCCCCCGAGCAGTAAAATCGATCATAAAGAACAAGAGTTTGGGTAAGAAGAAACCAAAGCAGGGTTCTGATTCTGGTTTATATGTTCCTCAGTCAAATGAAGCAAATAACAAGTCAGTTCCTGCTACAACTCCACTTGTTTGCGAGAGATGTTGGTGTGAAATAGAAAACAGCAAAGGTAATATAACACCGGGCCCTGCAGATGGAATAAACTTGAAGAGCGTGCTCTCTGGGCCAGCACAAACTGGTTGTAACAACAGTAGAGAAGTTGCAAAAGTGAAAAAGAATGGCAGATTGAAAGAGCAGCTTGAATTTTCACAAAGCTCAAAGAGTAGCCAAGGTGACTACAGCAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGTGGTTCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGAGTATTAGGCTTGAGAAACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACCGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCACAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACACTCTATGCACAGTTTACATCAGAAAATCTGTCATGTCTTGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGTAGATGTTTTTCAGAACCAGCAGCAAGGTTTTACGTTGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTCGGAGTTGTTTACCGTGATTTGAAACCAGAGAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACTGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCGACACTTCTGAAATCATCTTCTGATATAGATCCTGCCAAGGTTTCTGGTACATGTGCAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGGGGCAAAAGCAAGGAAACTCAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAACTTGTGGCAGAGCCCACAGATGCAAGATCAAACTCATTTGTTGGTACTCATGAATACCTAGCGCCCGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACTTTTGGTGTTTTTCTGTACGAGCTTTTATATGGTAGAACACCCTTCAAAGGTTCTAATAATGAAGAAACATTAGCCAATGTCGTGTTGCAAAATCTCAGATTCCCCGATAGTCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCAAAGGGTTGTTAGTTAAAGAGCCTGAAAACCGATTGGGTACAGAGAAAGGGGCCGCAGAGATTAAACAACATCCGTTCTTCGAGGGGCTTAATTGGGCCTTAATACGATGCGCTATCCCACCAGAACTTCCGGACCTTTGTGAATTCGAGTTGGGAGTTTCAGACATGATCGCACATTCACAAAGCAAGGGTGGTAAATATTTAGAGTGTACTACAACAGGTGGACAAGTGGAATTTGAGTTGTTTTAG
Protein sequence

>Msa0072060

MGSYSGTCEIVEARDDISTVKDARIYPSSSGYSVAEKNQKLPPLKLGYKDNLDDDINKLFETISLRSSSRDLSYLPDGTSPKLKSALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSGASPRISEAGKIQTLYNSVVTDARRSGPSNVDSSKRSSAEISPVLEESKSLGLNKESQSLQTSKSVLSQNVQSSEIAVAENETGASLMRSDLECSSSKVGVSSQSLEPIQMEKQMSASSPPCCNTNGSKVELPEKDSSPKKLGNKASTRKGMLQTTSSSSTSINGNRVCKLSRHSPRAVKSIIKNKSLGKKKPKQGSDSGLYVPQSNEANNKSVPATTPLVCERCWCEIENSKGNITPGPADGINLKSVLSGPAQTGCNNSREVAKVKKNGRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSSFGNRPHMSKDFRWQAIRDAQMQHGVLGLRNFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDIDPAKVSGTCAKSSCIEPFCIEPSCQVACFSPRFLPPGAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAHSQSKGGKYLECTTTGGQVEFELF*