AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0120620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0120620 MtrunA17_Chr1g0179101 97.439 859 20 1 1 857 1 859 0.0 1712
Msa0120620 MtrunA17_Chr7g0266031 71.348 883 220 14 1 857 1 876 0.0 1170
Msa0120620 MtrunA17_Chr3g0080101 68.817 465 137 5 397 857 342 802 0.0 658
Msa0120620 MtrunA17_Chr3g0080101 42.568 148 69 3 1 148 1 132 1.93e-22 103
Msa0120620 MtrunA17_Chr2g0290691 64.399 441 150 6 392 825 127 567 0.0 588
Msa0120620 MtrunA17_Chr8g0335351 58.386 471 169 8 367 818 258 720 0.0 552
Msa0120620 MtrunA17_Chr7g0250631 59.023 471 172 9 400 857 299 761 0.0 551
Msa0120620 MtrunA17_Chr7g0227331 67.363 383 119 3 443 819 207 589 0.0 546
Msa0120620 MtrunA17_Chr6g0449401 58.225 462 148 5 399 819 193 650 0.0 538
Msa0120620 MtrunA17_Chr2g0309421 55.605 446 180 6 424 857 132 571 7.77e-164 488
Msa0120620 MtrunA17_Chr8g0356291 58.015 393 154 7 443 829 101 488 6.26e-152 456
Msa0120620 MtrunA17_Chr4g0063311 53.061 392 169 4 443 819 66 457 4.11e-139 422
Msa0120620 MtrunA17_Chr2g0321101 53.018 381 152 6 447 812 66 434 5.88e-128 392
Msa0120620 MtrunA17_Chr8g0381091 49.250 400 166 7 436 819 45 423 2.47e-125 385
Msa0120620 MtrunA17_Chr2g0285711 50.000 392 162 9 443 821 57 427 2.95e-125 384
Msa0120620 MtrunA17_Chr2g0312641 44.708 463 208 15 407 857 33 459 2.81e-112 352
Msa0120620 MtrunA17_Chr4g0030361 45.745 376 156 4 443 818 282 609 1.08e-105 340
Msa0120620 MtrunA17_Chr8g0369091 44.241 382 168 4 443 824 572 908 1.96e-103 342
Msa0120620 MtrunA17_Chr2g0327561 45.263 380 163 4 443 818 601 939 2.49e-101 337
Msa0120620 MtrunA17_Chr4g0032761 39.305 374 194 9 465 819 10 369 3.15e-76 254
Msa0120620 MtrunA17_Chr2g0329011 40.223 358 175 7 465 819 12 333 5.55e-76 252
Msa0120620 MtrunA17_Chr8g0338741 40.000 375 189 10 465 825 15 367 6.33e-76 254
Msa0120620 MtrunA17_Chr7g0234641 37.903 372 199 9 460 819 1 352 1.07e-69 237
Msa0120620 MtrunA17_Chr6g0478601 37.427 342 169 8 467 807 108 405 1.18e-58 209
Msa0120620 MtrunA17_Chr5g0428981 36.257 342 172 8 467 807 760 1056 1.74e-58 217
Msa0120620 MtrunA17_Chr4g0018201 35.965 342 173 8 467 807 756 1052 2.52e-58 217
Msa0120620 MtrunA17_Chr3g0135951 31.989 372 214 11 443 807 67 406 2.32e-47 176
Msa0120620 MtrunA17_Chr1g0187581 31.063 367 213 8 459 820 106 437 1.12e-46 175
Msa0120620 MtrunA17_Chr1g0153321 31.831 355 204 9 459 810 97 416 2.80e-46 174
Msa0120620 MtrunA17_Chr1g0183651 30.790 367 213 10 459 820 109 439 4.19e-44 168
Msa0120620 MtrunA17_Chr1g0167351 30.233 387 227 11 465 842 105 457 4.40e-44 167
Msa0120620 MtrunA17_Chr7g0261491 30.189 371 214 10 459 820 109 443 8.57e-44 167
Msa0120620 MtrunA17_Chr2g0299781 30.029 343 207 8 469 807 112 425 1.02e-41 160
Msa0120620 MtrunA17_Chr1g0167311 28.684 380 234 8 442 819 87 431 5.13e-40 155
Msa0120620 MtrunA17_Chr7g0245031 37.107 159 98 1 465 623 143 299 6.00e-27 115
Msa0120620 MtrunA17_Chr7g0245031 47.748 111 55 2 698 807 301 409 6.87e-24 106
Msa0120620 MtrunA17_Chr4g0059751 37.126 167 91 4 460 617 80 241 1.72e-26 113
Msa0120620 MtrunA17_Chr4g0059751 41.964 112 62 2 698 808 249 358 1.17e-24 107
Msa0120620 MtrunA17_Chr1g0197721 36.667 150 89 2 467 614 48 193 1.70e-25 111
Msa0120620 MtrunA17_Chr1g0197721 36.800 125 76 2 695 818 212 334 4.28e-15 79.0
Msa0120620 MtrunA17_Chr3g0125381 41.071 112 62 1 692 803 100 207 5.93e-24 100
Msa0120620 MtrunA17_Chr3g0125381 35.922 103 62 2 520 621 2 101 4.18e-12 66.6
Msa0120620 MtrunA17_Chr8g0351491 27.300 337 164 8 467 803 13 268 8.89e-24 102
Msa0120620 MtrunA17_Chr3g0140631 36.774 155 92 2 467 619 34 184 5.47e-21 94.7
Msa0120620 MtrunA17_Chr3g0140631 37.963 108 63 1 695 802 185 288 4.53e-17 82.8
Msa0120620 MtrunA17_Chr8g0353621 27.164 335 163 8 467 801 7 260 7.82e-21 93.6
Msa0120620 MtrunA17_Chr6g0453681 26.549 339 165 9 467 803 16 272 1.85e-19 92.8
Msa0120620 MtrunA17_Chr6g0468751 26.627 338 164 9 467 802 16 271 4.17e-19 91.7
Msa0120620 MtrunA17_Chr2g0284031 26.462 325 163 7 465 788 26 275 5.50e-19 91.3
Msa0120620 MtrunA17_Chr4g0013131 32.903 155 101 2 463 617 5 156 5.96e-18 87.8
Msa0120620 MtrunA17_Chr6g0486661 33.544 158 96 5 667 818 880 1034 2.75e-17 87.0
Msa0120620 MtrunA17_Chr3g0132671 26.302 384 163 16 467 816 16 313 5.03e-17 85.1
Msa0120620 MtrunA17_Chr3g0114511 32.903 155 99 1 463 617 25 174 9.99e-17 84.0
Msa0120620 MtrunA17_Chr8g0379091 25.704 284 137 6 465 747 21 231 2.86e-16 82.8
Msa0120620 MtrunA17_Chr7g0244521 31.410 156 102 2 463 617 5 156 4.96e-16 81.6
Msa0120620 MtrunA17_Chr1g0188031 32.680 153 99 4 467 617 17 167 8.53e-16 80.9
Msa0120620 MtrunA17_Chr3g0107011 29.193 161 110 2 457 617 2 158 1.55e-15 80.1
Msa0120620 MtrunA17_Chr1g0205421 24.518 363 189 10 461 820 3 283 1.59e-15 80.1
Msa0120620 MtrunA17_Chr4g0001331 31.757 148 98 1 470 617 20 164 1.67e-15 80.1
Msa0120620 MtrunA17_Chr5g0432471 29.139 151 104 2 467 617 9 156 4.65e-15 79.0
Msa0120620 MtrunA17_Chr3g0107051 31.757 148 98 2 470 617 21 165 5.23e-15 78.6
Msa0120620 MtrunA17_Chr8g0346071 27.950 161 114 1 470 630 17 175 7.08e-15 78.2
Msa0120620 MtrunA17_Chr2g0284011 28.866 194 120 6 463 653 5 183 9.07e-15 77.8
Msa0120620 MtrunA17_Chr2g0304111 30.000 150 99 2 470 617 23 168 9.84e-15 77.8
Msa0120620 MtrunA17_Chr7g0272841 33.557 149 88 4 476 617 74 218 1.12e-14 78.2
Msa0120620 MtrunA17_Chr4g0074111 30.323 155 105 2 462 616 10 161 1.70e-14 76.3
Msa0120620 MtrunA17_Chr6g0450571 31.818 154 101 3 465 617 11 161 2.03e-14 77.4
Msa0120620 MtrunA17_Chr2g0286501 34.416 154 91 4 467 619 46 190 2.17e-14 77.8
Msa0120620 MtrunA17_Chr2g0302431 30.189 159 109 2 459 617 9 165 3.51e-14 75.9
Msa0120620 MtrunA17_Chr8g0346081 27.950 161 114 2 470 630 17 175 3.70e-14 75.9
Msa0120620 MtrunA17_Chr3g0130151 33.333 156 100 2 474 627 248 401 3.79e-14 76.6
Msa0120620 MtrunA17_Chr7g0274941 38.318 107 59 3 698 801 171 273 5.74e-14 73.6
Msa0120620 MtrunA17_Chr7g0274941 30.201 149 99 3 468 614 14 159 1.48e-12 69.3
Msa0120620 MtrunA17_Chr1g0190131 37.624 101 57 2 703 801 167 263 7.71e-14 72.8
Msa0120620 MtrunA17_Chr4g0008561 37.736 106 60 3 699 802 175 276 1.31e-13 75.1
Msa0120620 MtrunA17_Chr5g0441011 31.707 123 78 2 497 617 40 158 1.32e-13 73.9
Msa0120620 MtrunA17_Chr3g0091311 30.323 155 105 1 463 617 5 156 2.00e-13 71.2
Msa0120620 MtrunA17_Chr1g0150321 32.051 156 101 2 462 617 7 157 2.66e-13 73.2
Msa0120620 MtrunA17_Chr1g0166101 29.605 152 104 2 467 617 21 170 2.91e-13 72.8
Msa0120620 MtrunA17_Chr5g0432491 31.757 148 99 2 470 617 23 168 4.64e-13 72.4
Msa0120620 MtrunA17_Chr2g0317001 31.081 148 98 2 470 617 15 158 6.07e-13 72.8
Msa0120620 MtrunA17_Chr1g0190831 27.922 154 105 3 467 617 1 151 7.11e-13 72.4
Msa0120620 MtrunA17_Chr5g0428031 27.941 136 92 2 497 630 36 167 7.52e-13 71.6
Msa0120620 MtrunA17_Chr8g0386981 33.562 146 89 3 476 617 414 555 8.40e-13 72.4
Msa0120620 MtrunA17_Chr4g0000431 29.221 154 105 3 465 617 19 169 8.73e-13 72.4
Msa0120620 MtrunA17_Chr1g0203881 34.211 152 94 4 470 617 41 190 9.63e-13 71.6
Msa0120620 MtrunA17_Chr2g0321841 28.750 160 106 4 467 621 1 157 9.87e-13 72.4
Msa0120620 MtrunA17_Chr4g0025671 28.571 154 104 3 467 617 5 155 1.46e-12 71.6
Msa0120620 MtrunA17_Chr5g0419441 30.405 148 100 2 470 617 239 383 1.96e-12 71.2
Msa0120620 MtrunA17_Chr1g0170551 34.906 106 63 2 701 806 162 261 2.21e-12 71.2
Msa0120620 MtrunA17_Chr1g0176751 34.746 118 64 4 700 815 283 389 2.32e-12 70.5
Msa0120620 MtrunA17_Chr1g0202831 30.137 146 98 3 474 617 415 558 3.33e-12 70.5
Msa0120620 MtrunA17_Chr8g0384301 33.962 159 95 6 474 627 303 456 3.37e-12 70.5
Msa0120620 MtrunA17_Chr2g0333821 33.108 148 96 2 470 617 14 158 3.38e-12 69.7
Msa0120620 MtrunA17_Chr4g0061141 32.370 173 104 6 452 617 85 251 3.71e-12 70.1
Msa0120620 MtrunA17_Chr1g0188991 23.333 360 179 11 468 818 13 284 3.96e-12 70.1
Msa0120620 MtrunA17_Chr7g0258051 27.097 155 109 3 467 619 13 165 4.26e-12 70.1
Msa0120620 MtrunA17_Chr1g0173921 27.389 157 112 2 467 622 1 156 4.26e-12 70.1
Msa0120620 MtrunA17_Chr1g0200601 35.032 157 95 5 467 618 26 180 6.79e-12 68.9
Msa0120620 MtrunA17_Chr4g0063881 30.894 123 79 2 497 617 38 156 7.25e-12 68.6
Msa0120620 MtrunA17_Chr4g0040141 34.868 152 90 5 470 617 129 275 8.24e-12 68.9
Msa0120620 MtrunA17_Chr3g0132591 36.054 147 80 4 476 619 118 253 9.44e-12 68.2
Msa0120620 MtrunA17_Chr2g0330211 29.530 149 102 2 470 617 18 164 9.88e-12 68.6
Msa0120620 MtrunA17_Chr8g0385341 31.613 155 96 4 470 618 30 180 1.13e-11 68.2
Msa0120620 MtrunA17_Chr4g0047191 22.951 244 115 3 517 760 94 264 1.46e-11 67.0
Msa0120620 MtrunA17_Chr7g0252301 29.762 168 109 4 469 633 854 1015 1.67e-11 68.6
Msa0120620 MtrunA17_Chr4g0047211 22.951 244 115 3 517 760 89 259 2.42e-11 66.2
Msa0120620 MtrunA17_Chr4g0038501 27.168 173 115 4 470 641 20 182 4.72e-11 67.0
Msa0120620 MtrunA17_Chr3g0131861 34.416 154 90 6 469 617 96 243 6.36e-11 65.9
Msa0120620 MtrunA17_Chr6g0453711 29.070 172 111 6 452 617 90 256 7.18e-11 65.9
Msa0120620 MtrunA17_Chr2g0276831 31.737 167 99 6 474 633 14 172 7.74e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0120620 AT3G52890.2 52.929 956 329 32 1 857 1 934 0.0 832
Msa0120620 AT3G52890.4 52.929 956 329 32 1 857 1 934 0.0 832
Msa0120620 AT3G52890.1 52.929 956 329 32 1 857 1 934 0.0 832
Msa0120620 AT3G52890.3 52.929 956 329 32 1 857 1 934 0.0 832
Msa0120620 AT2G36350.1 50.777 965 351 25 1 857 1 949 0.0 822
Msa0120620 AT5G03640.2 70.524 458 106 10 419 857 479 926 0.0 657
Msa0120620 AT5G03640.2 33.760 391 185 14 1 371 1 337 2.32e-32 135
Msa0120620 AT5G03640.1 70.524 458 106 10 419 857 479 926 0.0 657
Msa0120620 AT5G03640.1 33.760 391 185 14 1 371 1 337 2.32e-32 135
Msa0120620 AT5G47750.1 61.345 476 173 7 392 857 112 586 0.0 588
Msa0120620 AT4G26610.1 62.850 428 154 4 401 825 54 479 0.0 558
Msa0120620 AT5G55910.2 60.970 433 152 7 403 825 44 469 3.40e-180 528
Msa0120620 AT5G55910.1 60.970 433 152 7 403 825 44 469 3.40e-180 528
Msa0120620 AT2G44830.2 61.882 425 148 7 408 825 303 720 3.84e-180 538
Msa0120620 AT2G44830.3 61.882 425 148 7 408 825 303 720 3.84e-180 538
Msa0120620 AT2G44830.1 61.882 425 148 7 408 825 303 720 3.84e-180 538
Msa0120620 AT3G27580.2 64.398 382 130 6 443 819 153 533 1.25e-172 512
Msa0120620 AT3G27580.1 64.398 382 130 6 443 819 153 533 1.25e-172 512
Msa0120620 AT5G40030.1 57.631 439 163 9 430 857 73 499 3.16e-170 503
Msa0120620 AT3G12690.1 62.368 380 131 3 443 820 158 527 2.05e-165 493
Msa0120620 AT3G12690.3 62.368 380 131 3 443 820 158 527 2.05e-165 493
Msa0120620 AT3G12690.2 62.368 380 131 3 443 820 158 527 2.05e-165 493
Msa0120620 AT1G79250.1 60.614 391 152 2 436 824 112 502 5.09e-165 491
Msa0120620 AT1G79250.3 60.614 391 152 2 436 824 112 502 5.09e-165 491
Msa0120620 AT1G79250.2 60.614 391 152 2 436 824 112 502 5.09e-165 491
Msa0120620 AT1G79250.4 60.614 391 152 2 436 824 112 502 5.09e-165 491
Msa0120620 AT1G16440.1 59.375 384 143 5 443 824 86 458 1.01e-155 465
Msa0120620 AT2G34650.1 52.972 387 147 8 443 819 50 411 1.52e-128 393
Msa0120620 AT3G44610.1 55.000 360 130 7 475 812 74 423 1.71e-128 393
Msa0120620 AT2G26700.1 45.575 452 180 9 425 819 40 482 6.70e-126 389
Msa0120620 AT5G58140.6 45.333 375 160 2 444 818 551 880 4.73e-104 343
Msa0120620 AT5G58140.7 45.333 375 160 2 444 818 551 880 4.73e-104 343
Msa0120620 AT5G58140.5 45.333 375 160 2 444 818 551 880 4.73e-104 343
Msa0120620 AT5G58140.2 45.333 375 160 2 444 818 551 880 4.73e-104 343
Msa0120620 AT5G58140.1 45.333 375 160 2 444 818 551 880 4.73e-104 343
Msa0120620 AT3G14370.1 44.764 382 171 6 445 817 61 411 5.95e-104 330
Msa0120620 AT5G58140.3 45.380 368 156 2 444 811 551 873 1.19e-102 339
Msa0120620 AT1G53700.1 45.128 390 169 9 445 823 66 421 6.82e-99 317
Msa0120620 AT3G45780.2 43.883 376 168 2 443 818 636 968 1.18e-97 327
Msa0120620 AT3G45780.1 43.883 376 168 2 443 818 636 968 1.18e-97 327
Msa0120620 AT3G20830.1 39.221 385 191 11 464 831 15 373 2.24e-71 241
Msa0120620 AT1G51170.1 39.674 368 183 9 465 819 17 358 4.01e-71 240
Msa0120620 AT4G13000.1 36.388 371 199 10 465 831 15 352 4.04e-67 228
Msa0120620 AT3G25250.1 35.829 374 195 9 459 819 6 347 2.34e-65 225
Msa0120620 AT1G45160.2 37.883 359 167 8 465 817 665 973 2.62e-58 216
Msa0120620 AT1G45160.1 37.883 359 167 8 465 817 665 973 5.60e-58 216
Msa0120620 AT1G48490.3 37.101 345 164 10 465 807 823 1116 1.93e-57 214
Msa0120620 AT1G48490.2 37.101 345 164 10 465 807 823 1116 1.93e-57 214
Msa0120620 AT1G48490.1 37.101 345 164 10 465 807 823 1116 1.93e-57 214
Msa0120620 AT1G48490.4 37.101 345 164 10 465 807 824 1117 1.99e-57 214
Msa0120620 AT5G62310.1 36.735 343 170 10 467 807 751 1048 5.13e-57 213
Msa0120620 AT3G17850.1 36.842 342 171 8 467 807 879 1176 1.98e-56 211
Msa0120620 AT1G30640.2 30.423 378 226 8 448 821 98 442 1.25e-48 182
Msa0120620 AT1G30640.1 30.423 378 226 8 448 821 98 442 1.25e-48 182
Msa0120620 AT1G30640.3 30.159 378 227 8 448 821 5 349 2.07e-48 179
Msa0120620 AT4G14350.3 31.152 382 221 9 445 820 94 439 1.47e-45 172
Msa0120620 AT4G14350.2 31.152 382 221 9 445 820 94 439 1.49e-45 172
Msa0120620 AT4G14350.1 31.152 382 221 9 445 820 94 439 1.49e-45 172
Msa0120620 AT4G14350.4 31.152 382 221 9 445 820 94 439 1.49e-45 172
Msa0120620 AT5G09890.2 30.812 357 201 8 459 807 91 409 5.19e-45 170
Msa0120620 AT5G09890.1 30.812 357 201 8 459 807 91 409 6.72e-45 170
Msa0120620 AT4G33080.2 29.351 385 233 10 445 820 69 423 1.00e-44 169
Msa0120620 AT4G33080.1 29.351 385 233 10 445 820 69 423 1.02e-44 169
Msa0120620 AT3G23310.1 28.755 466 277 14 363 820 24 442 1.53e-44 170
Msa0120620 AT2G20470.3 30.025 393 229 10 459 842 113 468 2.20e-44 169
Msa0120620 AT2G20470.2 30.025 393 229 10 459 842 113 468 2.86e-44 169
Msa0120620 AT2G20470.1 30.025 393 229 10 459 842 113 468 2.86e-44 169
Msa0120620 AT1G03920.1 30.623 369 211 10 459 820 126 456 2.94e-44 169
Msa0120620 AT1G03920.3 30.623 369 211 10 459 820 126 456 2.94e-44 169
Msa0120620 AT1G03920.2 30.623 369 211 10 459 820 13 343 5.75e-44 166
Msa0120620 AT2G19400.1 29.598 348 212 8 465 807 100 419 1.57e-38 151
Msa0120620 AT5G58140.4 43.511 131 74 0 444 574 551 681 3.20e-29 125
Msa0120620 AT3G08720.1 38.710 155 93 1 463 617 133 285 1.62e-28 120
Msa0120620 AT3G08720.1 48.673 113 54 3 696 807 291 400 7.83e-27 115
Msa0120620 AT3G08720.3 38.710 155 93 1 463 617 133 285 1.62e-28 120
Msa0120620 AT3G08720.3 48.673 113 54 3 696 807 291 400 7.83e-27 115
Msa0120620 AT3G08720.4 38.710 155 93 1 463 617 133 285 1.62e-28 120
Msa0120620 AT3G08720.4 48.673 113 54 3 696 807 291 400 7.83e-27 115
Msa0120620 AT3G08720.2 38.710 155 93 1 463 617 133 285 1.62e-28 120
Msa0120620 AT3G08720.2 48.673 113 54 3 696 807 291 400 7.83e-27 115
Msa0120620 AT2G25090.1 27.976 336 167 9 470 802 15 278 5.71e-28 119
Msa0120620 AT3G08730.1 38.065 155 94 1 463 617 127 279 6.08e-28 119
Msa0120620 AT3G08730.1 49.558 113 53 3 696 807 285 394 1.52e-27 117
Msa0120620 AT3G08730.2 38.065 155 94 1 463 617 127 279 6.08e-28 119
Msa0120620 AT3G08730.2 49.558 113 53 3 696 807 285 394 1.52e-27 117
Msa0120620 AT5G04510.3 35.196 179 104 3 438 614 18 186 3.52e-26 110
Msa0120620 AT5G04510.2 35.196 179 104 3 438 614 18 186 3.94e-26 112
Msa0120620 AT5G04510.2 35.938 128 78 3 695 820 205 330 1.98e-18 89.0
Msa0120620 AT5G04510.1 35.196 179 104 3 438 614 18 186 6.38e-26 113
Msa0120620 AT5G04510.1 35.938 128 78 3 695 820 205 330 1.96e-18 90.1
Msa0120620 AT3G10540.1 35.196 179 104 3 438 614 19 187 3.86e-25 110
Msa0120620 AT3G10540.1 35.156 128 79 3 695 820 206 331 6.79e-18 88.2
Msa0120620 AT2G20050.1 42.241 116 61 3 698 810 934 1046 5.69e-20 96.3
Msa0120620 AT2G20050.2 42.241 116 61 3 698 810 931 1043 6.24e-20 96.3
Msa0120620 AT2G45490.1 41.905 105 57 1 698 802 173 273 8.50e-20 91.3
Msa0120620 AT2G45490.1 33.117 154 99 2 467 619 19 169 5.26e-17 82.8
Msa0120620 AT4G18700.1 26.543 324 162 7 465 787 21 269 1.31e-19 93.6
Msa0120620 AT3G01090.3 26.685 371 182 12 467 834 16 299 1.65e-19 93.6
Msa0120620 AT3G01090.1 26.685 371 182 12 467 834 16 299 1.65e-19 93.6
Msa0120620 AT3G01090.2 26.685 371 182 12 467 834 39 322 2.23e-19 93.2
Msa0120620 AT5G45810.1 25.455 330 170 7 459 787 17 271 2.87e-19 92.4
Msa0120620 AT3G29160.3 25.959 339 167 9 467 803 17 273 8.04e-19 89.7
Msa0120620 AT3G29160.1 25.959 339 167 9 467 803 17 273 1.37e-18 90.5
Msa0120620 AT3G29160.2 25.959 339 167 9 467 803 17 273 1.37e-18 90.5
Msa0120620 AT2G25880.2 40.187 107 60 1 695 801 141 243 1.88e-18 86.7
Msa0120620 AT2G25880.1 40.187 107 60 1 695 801 173 275 2.98e-18 86.7
Msa0120620 AT2G25880.1 29.187 209 138 3 469 675 24 224 3.30e-18 86.7
Msa0120620 AT2G25880.4 40.187 107 60 1 695 801 186 288 3.01e-18 87.0
Msa0120620 AT2G25880.4 29.187 209 138 3 469 675 37 237 8.10e-18 85.5
Msa0120620 AT4G32830.1 36.364 154 92 2 467 618 28 177 3.02e-18 86.7
Msa0120620 AT4G32830.1 38.318 107 62 1 695 801 179 281 3.18e-17 83.6
Msa0120620 AT5G45820.1 32.484 157 103 2 461 617 3 156 3.41e-18 88.6
Msa0120620 AT5G18700.1 34.194 155 94 2 467 621 1 147 5.32e-18 90.1
Msa0120620 AT2G25880.3 40.187 107 60 1 695 801 234 336 7.77e-18 86.7
Msa0120620 AT2G25880.3 29.187 209 138 3 469 675 85 285 2.56e-17 85.1
Msa0120620 AT2G34180.1 24.355 349 184 8 456 803 43 312 1.18e-17 87.4
Msa0120620 AT2G45490.2 33.117 154 99 2 467 619 19 169 5.95e-17 82.0
Msa0120620 AT2G45490.2 39.024 82 50 0 698 779 173 254 3.16e-13 71.2
Msa0120620 AT1G29230.1 25.078 319 163 6 470 787 74 317 8.90e-17 85.1
Msa0120620 AT5G25110.1 31.395 172 111 3 449 617 20 187 9.93e-17 84.7
Msa0120620 AT1G12680.1 33.333 159 96 4 469 626 106 255 2.36e-16 83.2
Msa0120620 AT4G14580.1 32.051 156 103 3 463 617 14 167 3.45e-16 82.4
Msa0120620 AT5G10930.1 35.762 151 89 6 470 617 12 157 6.19e-16 81.6
Msa0120620 AT4G24400.1 29.448 163 109 2 470 630 9 167 1.15e-15 80.9
Msa0120620 AT4G24400.2 29.448 163 109 2 470 630 9 167 1.39e-15 80.5
Msa0120620 AT5G01810.1 32.911 158 102 3 464 621 7 160 1.89e-15 80.1
Msa0120620 AT5G01810.2 32.911 158 102 3 464 621 7 160 1.89e-15 80.1
Msa0120620 AT5G01810.3 32.911 158 102 3 464 621 7 160 2.67e-15 79.3
Msa0120620 AT3G23000.1 32.468 154 97 3 467 617 22 171 3.68e-15 79.3
Msa0120620 AT5G58380.1 22.222 333 181 8 470 802 12 266 6.06e-15 79.0
Msa0120620 AT3G06030.1 34.694 147 89 4 476 617 74 218 7.56e-15 79.3
Msa0120620 AT1G08650.1 38.835 103 57 2 703 803 176 274 8.27e-15 76.3
Msa0120620 AT1G70430.3 31.373 153 103 1 465 617 11 161 1.43e-14 78.2
Msa0120620 AT5G57630.2 28.302 159 106 3 463 617 2 156 1.49e-14 77.0
Msa0120620 AT5G57630.1 28.302 159 106 3 463 617 2 156 1.55e-14 77.4
Msa0120620 AT1G70430.4 31.373 153 103 1 465 617 11 161 1.56e-14 78.2
Msa0120620 AT1G70430.1 31.373 153 103 1 465 617 11 161 1.58e-14 78.2
Msa0120620 AT1G53570.6 32.121 165 106 5 466 627 210 371 1.81e-14 77.8
Msa0120620 AT1G53570.7 32.121 165 106 5 466 627 210 371 1.82e-14 77.8
Msa0120620 AT1G08650.2 41.304 92 52 1 703 792 176 267 2.11e-14 75.1
Msa0120620 AT1G30270.1 32.667 150 95 4 470 617 31 176 2.23e-14 77.0
Msa0120620 AT1G53570.2 32.121 165 106 5 466 627 210 371 2.59e-14 77.4
Msa0120620 AT1G53570.3 32.121 165 106 5 466 627 210 371 2.59e-14 77.4
Msa0120620 AT1G53570.1 32.121 165 106 5 466 627 210 371 2.69e-14 77.4
Msa0120620 AT1G53570.4 32.121 165 106 5 466 627 210 371 2.76e-14 77.4
Msa0120620 AT1G30270.2 32.667 150 95 4 470 617 31 176 3.74e-14 76.3
Msa0120620 AT3G04810.2 29.221 154 103 3 467 617 1 151 4.09e-14 76.6
Msa0120620 AT3G04810.1 29.221 154 103 3 467 617 1 151 4.09e-14 76.6
Msa0120620 AT3G04810.3 29.221 154 103 3 467 617 1 151 4.09e-14 76.6
Msa0120620 AT3G17510.1 28.033 239 135 7 467 673 17 250 4.11e-14 76.3
Msa0120620 AT2G30360.1 32.184 174 110 6 470 639 21 190 7.06e-14 75.5
Msa0120620 AT5G14720.1 31.169 154 102 3 465 617 11 161 7.67e-14 75.9
Msa0120620 AT5G14720.2 31.169 154 102 3 465 617 11 161 7.67e-14 75.9
Msa0120620 AT1G09000.1 32.653 147 92 4 476 617 75 219 1.21e-13 75.5
Msa0120620 AT1G54960.1 32.653 147 92 4 476 617 74 218 1.41e-13 75.1
Msa0120620 AT1G54960.2 32.653 147 92 4 476 617 74 218 1.41e-13 75.1
Msa0120620 AT1G09000.2 32.639 144 90 4 476 614 75 216 1.49e-13 75.1
Msa0120620 AT2G26980.2 33.058 121 79 2 497 617 41 159 2.70e-13 71.6
Msa0120620 AT3G04530.1 35.106 94 59 1 699 790 168 261 3.97e-13 71.2
Msa0120620 AT1G01140.1 29.530 149 103 2 469 617 18 164 4.06e-13 73.2
Msa0120620 AT1G01140.3 29.530 149 103 2 469 617 18 164 4.13e-13 73.2
Msa0120620 AT1G01140.2 29.530 149 103 2 469 617 18 164 4.21e-13 72.8
Msa0120620 AT2G26980.1 33.058 121 79 2 497 617 41 159 4.59e-13 72.4
Msa0120620 AT2G26980.3 33.058 121 79 2 497 617 41 159 4.89e-13 72.8
Msa0120620 AT4G30960.1 33.108 148 96 2 470 617 24 168 5.16e-13 72.8
Msa0120620 AT2G26980.4 33.058 121 79 2 497 617 51 169 5.43e-13 72.8
Msa0120620 AT2G26980.5 33.058 121 79 2 497 617 41 159 5.67e-13 72.4
Msa0120620 AT1G32320.1 33.333 153 90 4 467 617 45 187 7.34e-13 70.9
Msa0120620 AT4G09570.1 35.669 157 94 5 467 618 21 175 7.87e-13 72.4
Msa0120620 AT5G39440.1 31.373 153 99 2 467 617 16 164 1.01e-12 72.0
Msa0120620 AT5G28290.1 29.221 154 103 3 467 617 1 151 1.06e-12 72.0
Msa0120620 AT5G28290.2 29.221 154 103 3 467 617 1 151 1.06e-12 72.0
Msa0120620 AT5G28290.3 29.221 154 103 3 467 617 1 151 1.06e-12 72.0
Msa0120620 AT5G21326.1 31.707 123 78 2 497 617 40 158 1.50e-12 71.2
Msa0120620 AT5G39420.1 33.529 170 106 5 452 617 85 251 2.06e-12 71.2
Msa0120620 AT5G38210.2 28.116 345 192 15 308 617 193 516 2.48e-12 71.2
Msa0120620 AT3G44200.2 28.750 160 106 4 467 621 5 161 2.64e-12 71.2
Msa0120620 AT3G44200.1 28.750 160 106 4 467 621 5 161 2.64e-12 71.2
Msa0120620 AT5G38210.3 28.116 345 192 15 308 617 175 498 2.89e-12 70.9
Msa0120620 AT2G38490.1 33.333 156 85 6 470 617 28 172 4.80e-12 69.7
Msa0120620 AT1G50240.3 34.951 103 61 2 701 803 161 257 5.24e-12 70.5
Msa0120620 AT1G50240.2 34.951 103 61 2 701 803 161 257 5.24e-12 70.5
Msa0120620 AT5G35410.2 28.824 170 111 4 497 662 38 201 5.36e-12 68.9
Msa0120620 AT3G20860.1 25.828 151 111 1 467 617 1 150 5.76e-12 69.3
Msa0120620 AT4G14480.1 30.201 149 101 2 470 617 15 161 5.97e-12 69.3
Msa0120620 AT1G69220.1 29.801 151 97 3 470 617 249 393 6.29e-12 70.1
Msa0120620 AT4G24100.1 28.000 150 106 1 468 617 31 178 7.07e-12 69.7
Msa0120620 AT1G54510.4 26.974 152 109 2 467 617 1 151 7.08e-12 69.7
Msa0120620 AT1G54510.2 26.974 152 109 2 467 617 1 151 7.08e-12 69.7
Msa0120620 AT1G54510.1 26.974 152 109 2 467 617 1 151 7.08e-12 69.7
Msa0120620 AT1G54510.3 26.974 152 109 2 467 617 1 151 7.08e-12 69.7
Msa0120620 AT1G53165.1 29.730 148 100 2 470 617 15 158 7.55e-12 69.7
Msa0120620 AT4G24100.2 28.000 150 106 1 468 617 31 178 7.90e-12 69.7
Msa0120620 AT1G24650.1 31.795 195 112 8 433 616 513 697 8.08e-12 69.7
Msa0120620 AT1G35670.1 35.032 157 95 5 467 618 22 176 8.21e-12 68.9
Msa0120620 AT1G53165.3 29.730 148 100 2 470 617 15 158 8.51e-12 69.3
Msa0120620 AT1G53165.2 29.730 148 100 2 470 617 15 158 8.63e-12 69.3
Msa0120620 AT4G04720.2 30.323 155 98 4 470 618 80 230 9.41e-12 68.9
Msa0120620 AT4G04720.1 30.323 155 98 4 470 618 80 230 9.41e-12 68.9
Msa0120620 AT4G24100.4 28.000 150 106 1 468 617 47 194 9.52e-12 69.3
Msa0120620 AT2G41860.2 31.410 156 99 4 468 618 52 204 1.01e-11 68.9
Msa0120620 AT2G41860.1 31.410 156 99 4 468 618 52 204 1.02e-11 68.9
Msa0120620 AT5G35410.1 28.824 170 111 4 497 662 38 201 1.03e-11 68.6
Msa0120620 AT4G24100.3 28.000 150 106 1 468 617 47 194 1.06e-11 69.3
Msa0120620 AT2G01820.1 33.766 154 94 5 469 616 584 735 1.13e-11 69.3
Msa0120620 AT3G15220.1 29.054 148 101 2 470 617 15 158 1.21e-11 68.9
Msa0120620 AT5G01820.1 32.237 152 100 2 470 621 22 170 1.49e-11 68.2
Msa0120620 AT5G38210.1 30.303 264 153 11 366 617 260 504 1.65e-11 68.6
Msa0120620 AT1G63700.1 30.556 144 96 3 476 617 406 547 4.05e-11 67.4
Msa0120620 AT1G63700.2 30.556 144 96 3 476 617 406 547 4.05e-11 67.4
Msa0120620 AT3G02130.1 32.895 152 93 4 469 617 873 1018 5.88e-11 67.0
Msa0120620 AT3G02130.2 32.895 152 93 4 469 617 856 1001 5.90e-11 67.0
Msa0120620 AT1G73500.1 29.775 178 104 6 473 646 50 210 6.47e-11 65.1
Msa0120620 AT4G18950.2 31.452 124 80 3 497 617 182 303 7.71e-11 65.9
Msa0120620 AT3G57530.1 31.818 154 97 4 470 618 63 213 7.82e-11 66.2
Msa0120620 AT3G57530.2 31.818 154 97 4 470 618 63 213 8.53e-11 65.5
Msa0120620 AT3G07980.1 27.451 153 108 3 470 621 20 170 9.83e-11 66.2

Find 226 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCATTTCCATGGCAGTTT+AGG 0.171172 1_3:-45670716 Msa0120620:five_prime_UTR
CGTTCTTCGAGGGGCTTAAT+TGG 0.182487 1_3:-45665909 Msa0120620:CDS
CCAAAGCAGGGTTCTGATTC+TGG 0.182601 1_3:-45668641 Msa0120620:CDS
ATAGATCCTGCCAAGGTTTC+TGG 0.192162 1_3:-45666411 Msa0120620:CDS
TAATAGCAAACAAACAATTT+TGG 0.195592 1_3:+45668144 None:intergenic
TTTCGGAAGACTGAACATTT+TGG 0.262861 1_3:+45669014 None:intergenic
GAAGCTTCCTCCGCTGAAAC+TGG 0.270970 1_3:-45669500 Msa0120620:CDS
GTATATCTTTCTGAACTAAT+TGG 0.279231 1_3:-45668167 Msa0120620:CDS
TCCTCATCTACATCAATAAA+TGG 0.282055 1_3:-45668746 Msa0120620:CDS
AGCATTTCCATGGCAGTTTA+GGG 0.299786 1_3:-45670715 Msa0120620:five_prime_UTR
GATCATAAAGAACAAGAGTT+TGG 0.300248 1_3:-45668675 Msa0120620:CDS
CAAATGCAGCATGGAGTATT+AGG 0.309280 1_3:-45668242 Msa0120620:CDS
ATTTCAATGTGCTTACTTGC+AGG 0.309956 1_3:-45670610 Msa0120620:intron
TTCATTGATGCGAAGTGATT+TGG 0.314477 1_3:-45668963 Msa0120620:CDS
TGCTGAAGTCCTTCTTGCTT+TGG 0.319482 1_3:-45666580 Msa0120620:CDS
TTCCCGGCCTCTGATATTCT+TGG 0.322131 1_3:+45669208 None:intergenic
TTTGAATGGGTTCTAATGAT+TGG 0.331451 1_3:+45668909 None:intergenic
TTACTACTGTCAACATTAGA+AGG 0.334003 1_3:+45669136 None:intergenic
TGTTATTTGCTTCATTTGAC+TGG 0.334338 1_3:+45668606 None:intergenic
CGCTATCCCACCAGAACTTC+CGG 0.340060 1_3:-45665872 Msa0120620:CDS
TCACAAAGGTCCGGAAGTTC+TGG 0.345663 1_3:+45665862 None:intergenic
AATGTCAGTGGTTCTAGTTT+TGG 0.355133 1_3:-45668317 Msa0120620:CDS
TCCCTCTCCTTTGATGATCT+CGG 0.360706 1_3:+45666176 None:intergenic
TCATACTACATTGAATTTAG+TGG 0.367257 1_3:-45669654 Msa0120620:five_prime_UTR
GTCACTGATGCTAGGAGATC+AGG 0.369169 1_3:-45669160 Msa0120620:CDS
AGGATATATCCGTCCAGTTC+AGG 0.377399 1_3:-45669547 Msa0120620:CDS
AAGAGACCTATGTATATCTA+AGG 0.380607 1_3:-45669278 Msa0120620:CDS
TTCAAGTTTATTCCATCTGC+AGG 0.380968 1_3:+45668500 None:intergenic
AACTTTGGACTTGTTCCATC+TGG 0.386270 1_3:+45669391 None:intergenic
CTGGTTTGAATTCTGAAAGC+TGG 0.386620 1_3:-45669782 Msa0120620:five_prime_UTR
TACAACATAGGCTTACATAA+TGG 0.387314 1_3:+45665654 None:intergenic
GCAGTTGCAGAAAATGAAAC+AGG 0.388859 1_3:-45668989 Msa0120620:CDS
AATGTTCATCAAGTAAAGTT+GGG 0.393315 1_3:-45668940 Msa0120620:CDS
TTAGTTATGTACCTTGCTGC+TGG 0.394633 1_3:+45667909 None:intergenic
GCAGTTGATTGGTGGACTTT+TGG 0.396090 1_3:-45666144 Msa0120620:CDS
ATATTCAGCATAGGAATTGA+TGG 0.396537 1_3:+45665514 None:intergenic
AACTTGAAGAGCGTGCTCTC+TGG 0.398133 1_3:-45668485 Msa0120620:CDS
CCCCTTTCTCTGTACCCAAT+CGG 0.405775 1_3:+45665953 None:intergenic
TGGGATAGCGCATCGTATTA+AGG 0.406455 1_3:+45665885 None:intergenic
CGAGGTACACCCATTGTCAT+TGG 0.406906 1_3:+45669349 None:intergenic
TCCCTTTCAGTTTGTGCCCT+AGG 0.407081 1_3:+45668080 None:intergenic
ATCTCCAATGGGCTCGTACT+CGG 0.410861 1_3:-45669623 Msa0120620:exon
TTCATTATTAGAACCTTTGA+AGG 0.413043 1_3:+45666086 None:intergenic
CACCTGCTTCTTCTGTATTG+TGG 0.414120 1_3:-45670657 Msa0120620:five_prime_UTR
GTTCTTCGAGGGGCTTAATT+GGG 0.414560 1_3:-45665908 Msa0120620:CDS
GTACAATGTCTGTATCTTCC+CGG 0.414759 1_3:+45669192 None:intergenic
GACCTTTGTGAATTCGAGTT+GGG 0.415037 1_3:-45665850 Msa0120620:CDS
ATCATAAAGAACAAGAGTTT+GGG 0.415871 1_3:-45668674 Msa0120620:CDS
GAATGTTCATCAAGTAAAGT+TGG 0.417858 1_3:-45668941 Msa0120620:CDS
CTCTCTGGGCCAGCACAAAC+TGG 0.418662 1_3:-45668470 Msa0120620:CDS
CCAGAATCAGAACCCTGCTT+TGG 0.419048 1_3:+45668641 None:intergenic
TATATCTAAGGCATCGGAAA+TGG 0.420286 1_3:-45669266 Msa0120620:CDS
TCTCCAATGGGCTCGTACTC+GGG 0.421635 1_3:-45669622 Msa0120620:exon
GCCCCAGGTGGTAAGAATCT+AGG 0.421684 1_3:+45666318 None:intergenic
AAACTAACAAATGGACTATC+GGG 0.421936 1_3:+45666024 None:intergenic
ATCATTAGAACCCATTCAAA+TGG 0.423949 1_3:-45668906 Msa0120620:CDS
GCAAGATCAAACTCATTTGT+TGG 0.426222 1_3:-45666219 Msa0120620:CDS
TTTGTTTGCTATTAAAGTAA+TGG 0.428001 1_3:-45668135 Msa0120620:CDS
CCCTCTCCTTTGATGATCTC+GGG 0.431842 1_3:+45666177 None:intergenic
CAACTCTACTTTACTTCCAT+TGG 0.431940 1_3:+45668844 None:intergenic
CTTTGATAAGATCCCTTGCT+TGG 0.432685 1_3:+45666001 None:intergenic
TACCTCGATCCCCACGAGTT+GGG 0.435212 1_3:-45669333 Msa0120620:CDS
TTGAATGGGTTCTAATGATT+GGG 0.439666 1_3:+45668910 None:intergenic
GAAACTAACAAATGGACTAT+CGG 0.444582 1_3:+45666023 None:intergenic
AGTCCTAGATTCTTACCACC+TGG 0.445086 1_3:-45666321 Msa0120620:CDS
TCTCGAACAAGAATGTTCTC+TGG 0.449274 1_3:+45666516 None:intergenic
AACCGATTGGGTACAGAGAA+AGG 0.450567 1_3:-45665955 Msa0120620:CDS
GTCACATAAATGGTAAAGAA+AGG 0.452115 1_3:-45669821 Msa0120620:five_prime_UTR
AAGGGAAATATTACGAATGC+TGG 0.453731 1_3:-45668063 Msa0120620:CDS
ACGGTAAAATGTGCTTTATA+AGG 0.456695 1_3:-45665612 Msa0120620:three_prime_UTR
TCTAATGTTGACAGTAGTAA+AGG 0.467388 1_3:-45669133 Msa0120620:CDS
TATTTAGAGTGTACTACAAC+AGG 0.469758 1_3:-45665784 Msa0120620:CDS
CTAATGTTGACAGTAGTAAA+GGG 0.477801 1_3:-45669132 Msa0120620:CDS
TCAAAACTAATTTACAACAT+AGG 0.479924 1_3:+45665642 None:intergenic
AGCTACACTATATCCTGAAC+TGG 0.480141 1_3:+45669534 None:intergenic
CTTGCTTGGAAACTAACAAA+TGG 0.480810 1_3:+45666015 None:intergenic
CAACAGTGGCATTGTTTCTG+TGG 0.480876 1_3:-45665716 Msa0120620:three_prime_UTR
GTGGAGGAAATTATCTCCAA+TGG 0.481226 1_3:-45669635 Msa0120620:exon
GATACAGACATTGTACAATT+CGG 0.481886 1_3:-45669185 Msa0120620:CDS
TCACATAAATGGTAAAGAAA+GGG 0.483507 1_3:-45669820 Msa0120620:five_prime_UTR
CGGAAATGGCTGCTATGAAA+AGG 0.484378 1_3:-45669252 Msa0120620:CDS
AATTAGTTCAGAAAGATATA+CGG 0.484594 1_3:+45668169 None:intergenic
AGGGATGTACACTTAAAGTC+TGG 0.486320 1_3:-45669801 Msa0120620:five_prime_UTR
ACTTGAAGAGCGTGCTCTCT+GGG 0.489162 1_3:-45668484 Msa0120620:CDS
AACTGAAATATCTCCGGTGC+TGG 0.490362 1_3:-45669104 Msa0120620:CDS
TTGGAGTACTTGCACATGCT+CGG 0.492127 1_3:-45666561 Msa0120620:CDS
AACATTCTTGTTCGAGAAGA+CGG 0.493896 1_3:-45666510 Msa0120620:CDS
GACATGGAGCTGCAGTTGAT+TGG 0.495502 1_3:-45666155 Msa0120620:CDS
TCCGCTGAAACTGGGATACA+AGG 0.498155 1_3:-45669491 Msa0120620:CDS
CTTGTCATGGAGTATTGTCC+TGG 0.498365 1_3:-45667984 Msa0120620:CDS
CTTTGATGATCTCGGGTGCT+AGG 0.498959 1_3:+45666184 None:intergenic
CAAGCAAGGGATCTTATCAA+AGG 0.504426 1_3:-45666000 Msa0120620:CDS
TTTATTCCATCTGCAGGGCC+CGG 0.504556 1_3:+45668506 None:intergenic
ATGAAAAGGTTATCAAAGTC+CGG 0.505798 1_3:-45669238 Msa0120620:CDS
GGACCTTTGTGAATTCGAGT+TGG 0.510704 1_3:-45665851 Msa0120620:CDS
GTTATTTGCTTCATTTGACT+GGG 0.515431 1_3:+45668607 None:intergenic
TTCTCTGAGATCTTCGTCAA+GGG 0.516916 1_3:-45669428 Msa0120620:CDS
TGAGCCGGTGACTTTGAAGC+AGG 0.518357 1_3:-45669305 Msa0120620:CDS
TGATATTCTTGGAGAAGCTC+CGG 0.518551 1_3:+45669219 None:intergenic
CACTTGTTTGCGAGAGATGT+TGG 0.518948 1_3:-45668562 Msa0120620:CDS
GCATAGAGTGTTGGAAGAAA+AGG 0.520558 1_3:+45668035 None:intergenic
ACGAGTTGGGATTTCTGAGC+CGG 0.520650 1_3:-45669320 Msa0120620:CDS
ACCGATTGGGTACAGAGAAA+GGG 0.522552 1_3:-45665954 Msa0120620:CDS
TAAAGAGCCTGAAAACCGAT+TGG 0.525170 1_3:-45665968 Msa0120620:CDS
CTCCAAGAATATCAGAGGCC+GGG 0.526522 1_3:-45669210 Msa0120620:CDS
CCGATGCCTTAGATATACAT+AGG 0.527023 1_3:+45669272 None:intergenic
AACTCGAATTCACAAAGGTC+CGG 0.527294 1_3:+45665853 None:intergenic
CAAACAAGTGGAGTTGTAGC+AGG 0.528559 1_3:+45668575 None:intergenic
TATGGTAGAACACCCTTCAA+AGG 0.528632 1_3:-45666099 Msa0120620:CDS
GCCTAGGGCACAAACTGAAA+GGG 0.531959 1_3:-45668081 Msa0120620:CDS
TGGAGGAAATTATCTCCAAT+GGG 0.532808 1_3:-45669634 Msa0120620:exon
ATTTGTTAGTTTCCAAGCAA+GGG 0.533029 1_3:-45666013 Msa0120620:CDS
TGCCTAGGGCACAAACTGAA+AGG 0.533660 1_3:-45668082 Msa0120620:CDS
TTGTTACAACCAGTTTGTGC+TGG 0.533954 1_3:+45668461 None:intergenic
GAAGATGATTTCAGAAGTGT+CGG 0.534124 1_3:+45666438 None:intergenic
TGAGTTTGATCTTGCATCTG+TGG 0.534621 1_3:+45666227 None:intergenic
GGGTAAGAAGAAACCAAAGC+AGG 0.535267 1_3:-45668654 Msa0120620:CDS
GACTTGCTTTCTTCCAGCAC+CGG 0.535516 1_3:+45669091 None:intergenic
TGTTCTCTGGTTTCAAATCA+CGG 0.536426 1_3:+45666529 None:intergenic
TGCACATGTACCAGAAACCT+TGG 0.539921 1_3:+45666401 None:intergenic
CATTTGTTAGTTTCCAAGCA+AGG 0.540412 1_3:-45666014 Msa0120620:CDS
CTTCCATTGGTGTTACAACA+AGG 0.541296 1_3:+45668857 None:intergenic
CTTTAATTTATATTCAGCAT+AGG 0.541662 1_3:+45665505 None:intergenic
AAAGAGCCTGAAAACCGATT+GGG 0.543386 1_3:-45665967 Msa0120620:CDS
GTGGGCTCTGCCACAAGTTG+TGG 0.543584 1_3:+45666246 None:intergenic
CTGCATTTGAGCATCTCGTA+TGG 0.544030 1_3:+45668256 None:intergenic
ATAACACCGGGCCCTGCAGA+TGG 0.544715 1_3:-45668512 Msa0120620:CDS
AAGCAAGGGATCTTATCAAA+GGG 0.546140 1_3:-45665999 Msa0120620:CDS
CACAAAGGAAGAAGATGCCT+AGG 0.546595 1_3:-45668097 Msa0120620:CDS
TCTCCAAGAATATCAGAGGC+CGG 0.547265 1_3:-45669211 Msa0120620:CDS
CAAAGGTCCGGAAGTTCTGG+TGG 0.547383 1_3:+45665865 None:intergenic
AAACAACATCCGTTCTTCGA+GGG 0.549529 1_3:-45665919 Msa0120620:CDS
CAGATCATTGCCACAACTTG+TGG 0.550134 1_3:-45666256 Msa0120620:CDS
CATGTACCAGAAACCTTGGC+AGG 0.552486 1_3:+45666405 None:intergenic
GCCATTTATTGATGTAGATG+AGG 0.552846 1_3:+45668745 None:intergenic
TCAAGTTTATTCCATCTGCA+GGG 0.553310 1_3:+45668501 None:intergenic
CCACCTTGTTGTAACACCAA+TGG 0.553522 1_3:-45668860 Msa0120620:CDS
GTCCTAGATTCTTACCACCT+GGG 0.554174 1_3:-45666320 Msa0120620:CDS
AAACTTGGTTGTGGAGACAT+TGG 0.554545 1_3:-45668194 Msa0120620:CDS
TCACTGATGCTAGGAGATCA+GGG 0.556404 1_3:-45669159 Msa0120620:CDS
CCCGAGATCATCAAAGGAGA+GGG 0.557744 1_3:-45666177 Msa0120620:CDS
AAGCTTCCTCCGCTGAAACT+GGG 0.558427 1_3:-45669499 Msa0120620:CDS
TACCACCTGGGGCAAAAGCA+AGG 0.560142 1_3:-45666308 Msa0120620:CDS
TAACGTCACACCTGAGTGAA+AGG 0.560894 1_3:+45666463 None:intergenic
TTTCTCTGAGATCTTCGTCA+AGG 0.561091 1_3:-45669429 Msa0120620:CDS
ATGGAGCTGCAGTTGATTGG+TGG 0.561888 1_3:-45666152 Msa0120620:CDS
AAATCTGTCATGTCTTGTCA+TGG 0.562494 1_3:-45667997 Msa0120620:CDS
ATCATCAAAGGAGAGGGACA+TGG 0.563595 1_3:-45666171 Msa0120620:CDS
GAGTTTGATCTTGCATCTGT+GGG 0.564013 1_3:+45666228 None:intergenic
GATCGCACAGTCACAAAGCA+AGG 0.565695 1_3:-45665815 Msa0120620:CDS
CAATTAAGCCCCTCGAAGAA+CGG 0.565981 1_3:+45665910 None:intergenic
CAACATCTCTCGCAAACAAG+TGG 0.566758 1_3:+45668563 None:intergenic
TGTGCTTTATAAGGTGTAGG+AGG 0.567166 1_3:-45665603 Msa0120620:three_prime_UTR
GTACCTCGATCCCCACGAGT+TGG 0.569241 1_3:-45669334 Msa0120620:CDS
TACTACAACAGGTGGACAAG+TGG 0.569450 1_3:-45665773 Msa0120620:CDS
AAGCATGCAACTTGACAAGA+TGG 0.570439 1_3:+45666345 None:intergenic
ATCCACAATACAGAAGAAGC+AGG 0.570496 1_3:+45670655 None:intergenic
GAGTTCAACTGAAATATCTC+CGG 0.572526 1_3:-45669110 Msa0120620:CDS
AACAACATCCGTTCTTCGAG+GGG 0.572629 1_3:-45665918 Msa0120620:CDS
AGATTCCTTCAGCATTTCCA+TGG 0.573595 1_3:-45670725 Msa0120620:five_prime_UTR
ATTCGGTAGTCACTGATGCT+AGG 0.574795 1_3:-45669168 Msa0120620:CDS
CAAAGCTCAAAGAGTAGCCA+AGG 0.577202 1_3:-45668377 Msa0120620:CDS
ACTGACATTACTCTCGTCGC+TGG 0.577572 1_3:+45668331 None:intergenic
TACTACTGCTGTAGTCACCT+TGG 0.579611 1_3:+45668360 None:intergenic
TTCTGATATAGATCCTGCCA+AGG 0.581336 1_3:-45666418 Msa0120620:CDS
AATGCCTGCTTCAAAGTCAC+CGG 0.582267 1_3:+45669301 None:intergenic
TAAACAACATCCGTTCTTCG+AGG 0.583042 1_3:-45665920 Msa0120620:CDS
GGCTCAGAAATCCCAACTCG+TGG 0.584426 1_3:+45669322 None:intergenic
ATGTTCATCAAGTAAAGTTG+GGG 0.585560 1_3:-45668939 Msa0120620:CDS
TCCTTGTATCCCAGTTTCAG+CGG 0.586814 1_3:+45669490 None:intergenic
AATAAAGCATCTACACGGAA+AGG 0.586972 1_3:-45668788 Msa0120620:CDS
CCTATGTATATCTAAGGCAT+CGG 0.587384 1_3:-45669272 Msa0120620:CDS
GCTCAGAAATCCCAACTCGT+GGG 0.587632 1_3:+45669323 None:intergenic
CTTGTGAAATTGTTGAAGCG+AGG 0.588041 1_3:-45669597 Msa0120620:CDS
ATCCCAACTCGTGGGGATCG+AGG 0.588163 1_3:+45669331 None:intergenic
TTATTTGCTTCATTTGACTG+GGG 0.591602 1_3:+45668608 None:intergenic
AGAGAAACCCTAAACTGCCA+TGG 0.593010 1_3:+45670708 None:intergenic
CAAGATGGTTCAATGCAGAA+TGG 0.593437 1_3:+45666360 None:intergenic
GAATTCTGAAAGCTGGATTG+CGG 0.594028 1_3:-45669775 Msa0120620:five_prime_UTR
AACTGCCATGGAAATGCTGA+AGG 0.594236 1_3:+45670720 None:intergenic
ATGTTTCTCTTTGTCAACAG+TGG 0.594571 1_3:-45665730 Msa0120620:three_prime_UTR
GTAAACTGTGCATAGAGTGT+TGG 0.596126 1_3:+45668026 None:intergenic
GGCACTGATAATTTAGTAGA+GGG 0.596237 1_3:+45670827 None:intergenic
CAGTTGCAGAAAATGAAACA+GGG 0.598118 1_3:-45668988 Msa0120620:CDS
CTGGAAGAAAGCAAGTCGGT+TGG 0.598951 1_3:-45669085 Msa0120620:CDS
GTTCCCGAGTACGAGCCCAT+TGG 0.599638 1_3:+45669619 None:intergenic
CAATAGGCCTCACATGTCAA+AGG 0.604784 1_3:-45668294 Msa0120620:CDS
TCATTATTAGAACCTTTGAA+GGG 0.605401 1_3:+45666087 None:intergenic
AAGATGATTTCAGAAGTGTC+GGG 0.605932 1_3:+45666439 None:intergenic
GCAAGTACTCCAAAGCAAGA+AGG 0.606416 1_3:+45666571 None:intergenic
AAATGTGCTTTATAAGGTGT+AGG 0.608095 1_3:-45665606 Msa0120620:three_prime_UTR
GATTTGAGCTATCTACCAGA+TGG 0.608922 1_3:-45669406 Msa0120620:CDS
GTTCTACGTCAGAAACAGCT+TGG 0.610473 1_3:-45667948 Msa0120620:CDS
CTAGCACCCGAGATCATCAA+AGG 0.611146 1_3:-45666183 Msa0120620:CDS
CTAAAATCCTTTGACATGTG+AGG 0.614502 1_3:+45668287 None:intergenic
AGAACATGAAGATCTCCTCC+AGG 0.614542 1_3:+45667966 None:intergenic
TACTACATTGAATTTAGTGG+AGG 0.615697 1_3:-45669651 Msa0120620:five_prime_UTR
TTGTGAAATTGTTGAAGCGA+GGG 0.619052 1_3:-45669596 Msa0120620:CDS
TCCTAGATTCTTACCACCTG+GGG 0.624909 1_3:-45666319 Msa0120620:CDS
CGAGATGCTCAAATGCAGCA+TGG 0.626391 1_3:-45668251 Msa0120620:CDS
CCGATTGGGTACAGAGAAAG+GGG 0.626835 1_3:-45665953 Msa0120620:CDS
CTCAGAAATCCCAACTCGTG+GGG 0.627023 1_3:+45669324 None:intergenic
AGCAAAGGTAATATAACACC+GGG 0.630273 1_3:-45668524 Msa0120620:CDS
AGCTTCTCCAAGAATATCAG+AGG 0.631647 1_3:-45669215 Msa0120620:CDS
GGTAAGAAGAAACCAAAGCA+GGG 0.633251 1_3:-45668653 Msa0120620:CDS
CAGCAAAGGTAATATAACAC+CGG 0.636879 1_3:-45668525 Msa0120620:CDS
ACCCGAGATCATCAAAGGAG+AGG 0.636934 1_3:-45666178 Msa0120620:CDS
TGGCACTGATAATTTAGTAG+AGG 0.639549 1_3:+45670826 None:intergenic
TTGTATCCCAGTTTCAGCGG+AGG 0.645256 1_3:+45669493 None:intergenic
ATCGCACAGTCACAAAGCAA+GGG 0.646722 1_3:-45665814 Msa0120620:CDS
TTAGAGTGTACTACAACAGG+TGG 0.650533 1_3:-45665781 Msa0120620:CDS
TTAGTACAGTGAAAGATGCA+AGG 0.651962 1_3:-45669567 Msa0120620:CDS
ACACTATATCCTGAACTGGA+CGG 0.652069 1_3:+45669538 None:intergenic
GTCATGGAGTATTGTCCTGG+AGG 0.654376 1_3:-45667981 Msa0120620:CDS
ACAAAGGAAGAAGATGCCTA+GGG 0.660068 1_3:-45668096 Msa0120620:CDS
AACTAACAAATGGACTATCG+GGG 0.660217 1_3:+45666025 None:intergenic
CGGATGTTGTTTAATCTCTG+CGG 0.661803 1_3:+45665930 None:intergenic
TGTGAAATAGAAAACAGCAA+AGG 0.665201 1_3:-45668539 Msa0120620:CDS
GCACAGTCACAAAGCAAGGG+TGG 0.674594 1_3:-45665811 Msa0120620:CDS
AAAGGTCCGGAAGTTCTGGT+GGG 0.678755 1_3:+45665866 None:intergenic
TAGGAAATAAAGCATCTACA+CGG 0.687698 1_3:-45668793 Msa0120620:CDS
AGTTGCAGAAAATGAAACAG+GGG 0.694625 1_3:-45668987 Msa0120620:CDS
CTCCCAACTCGAATTCACAA+AGG 0.703173 1_3:+45665848 None:intergenic
CCATTGGTGTTACAACAAGG+TGG 0.712169 1_3:+45668860 None:intergenic
GGTGCTGGAAGAAAGCAAGT+CGG 0.730109 1_3:-45669089 Msa0120620:CDS
AGCGACGAGAGTAATGTCAG+TGG 0.730559 1_3:-45668329 Msa0120620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAGTATATTAATACA+TGG + chr1_3:45666430-45666449 None:intergenic 10.0%
!! TTGTTCAAATTATTAAGAAA+TGG - chr1_3:45666167-45666186 Msa0120620:CDS 15.0%
!!! TTTATTTCCTAATTTTTTAG+GGG + chr1_3:45667532-45667551 None:intergenic 15.0%
!!! CTTTATTTCCTAATTTTTTA+GGG + chr1_3:45667533-45667552 None:intergenic 15.0%
!!! TTGAATTTTGATATGTTTAT+AGG - chr1_3:45668609-45668628 Msa0120620:CDS 15.0%
!!! ATCTTATAAATTAGTTTTGT+GGG + chr1_3:45669035-45669054 None:intergenic 15.0%
!! CTATTTGAATTTATCTTTCA+TGG - chr1_3:45665900-45665919 Msa0120620:CDS 20.0%
!! TAGTGAATATGAACAATAAT+TGG - chr1_3:45666024-45666043 Msa0120620:CDS 20.0%
!!! CAATAATTGGTTTAATAGTT+TGG - chr1_3:45666037-45666056 Msa0120620:CDS 20.0%
!! AATTGATGAAAATTAGAAAG+TGG - chr1_3:45666096-45666115 Msa0120620:CDS 20.0%
!! GTAAATAAGAGATAAATCAA+GGG + chr1_3:45666212-45666231 None:intergenic 20.0%
!! TAAGTATATTAATACATGGA+AGG + chr1_3:45666426-45666445 None:intergenic 20.0%
!!! ATTTGTTTTTCCATTTGAAT+GGG + chr1_3:45667441-45667460 None:intergenic 20.0%
!!! GCTTTATTTCCTAATTTTTT+AGG + chr1_3:45667534-45667553 None:intergenic 20.0%
!! AATTAGTTCAGAAAGATATA+CGG + chr1_3:45668168-45668187 None:intergenic 20.0%
!!! TAATAGCAAACAAACAATTT+TGG + chr1_3:45668193-45668212 None:intergenic 20.0%
!!! TTTGTTTGCTATTAAAGTAA+TGG - chr1_3:45668199-45668218 Msa0120620:CDS 20.0%
!!! TACACTTAGCTAAATTTTTA+AGG - chr1_3:45668878-45668897 Msa0120620:CDS 20.0%
!!! TCTTATAAATTAGTTTTGTG+GGG + chr1_3:45669034-45669053 None:intergenic 20.0%
!!! CATCTTATAAATTAGTTTTG+TGG + chr1_3:45669036-45669055 None:intergenic 20.0%
!! CAAAACTAATTTATAAGATG+AGG - chr1_3:45669036-45669055 Msa0120620:CDS 20.0%
!! TATGTAAGCACTATTATAAA+AGG - chr1_3:45669062-45669081 Msa0120620:CDS 20.0%
!! TTATAAAAGGTTATATGTCT+AGG - chr1_3:45669075-45669094 Msa0120620:CDS 20.0%
!! TCAAAACTAATTTACAACAT+AGG + chr1_3:45670695-45670714 None:intergenic 20.0%
!!! AATTAGTTTTGATTATAGCA+CGG - chr1_3:45670703-45670722 Msa0120620:five_prime_UTR 20.0%
!!! ATAAAGCTTAATTTTCTTTC+AGG + chr1_3:45670782-45670801 None:intergenic 20.0%
!!! CTTTAATTTATATTCAGCAT+AGG + chr1_3:45670832-45670851 None:intergenic 20.0%
!!! ATTTCATTTTTCTTACATCG+TGG - chr1_3:45665482-45665501 Msa0120620:three_prime_UTR 25.0%
!!! TTTCATTTTTCTTACATCGT+GGG - chr1_3:45665483-45665502 Msa0120620:three_prime_UTR 25.0%
!!! CTTTTTTGTGTTTGTTGTTT+TGG - chr1_3:45665845-45665864 Msa0120620:CDS 25.0%
! TTTGAATTTATCTTTCATGG+AGG - chr1_3:45665903-45665922 Msa0120620:CDS 25.0%
!! ATTTGAGATTTGATCTGATT+TGG - chr1_3:45666063-45666082 Msa0120620:CDS 25.0%
! GGTAAATAAGAGATAAATCA+AGG + chr1_3:45666213-45666232 None:intergenic 25.0%
! AATTATTGTGTTGTATGAGA+TGG - chr1_3:45666265-45666284 Msa0120620:CDS 25.0%
! TTCAATTATTGACCATTATC+AGG - chr1_3:45666483-45666502 Msa0120620:CDS 25.0%
!! AGGTTTTTATGTCACATAAA+TGG - chr1_3:45666503-45666522 Msa0120620:CDS 25.0%
! TCACATAAATGGTAAAGAAA+GGG - chr1_3:45666514-45666533 Msa0120620:CDS 25.0%
!! ATGAATCACAATAGACTTTT+TGG - chr1_3:45666632-45666651 Msa0120620:intron 25.0%
! TCATACTACATTGAATTTAG+TGG - chr1_3:45666680-45666699 Msa0120620:intron 25.0%
! TTAAAAAAGCCAATGACAAT+GGG - chr1_3:45666976-45666995 Msa0120620:intron 25.0%
! AATGTTCATCAAGTAAAGTT+GGG - chr1_3:45667394-45667413 Msa0120620:intron 25.0%
!!! CATTTGTTTTTCCATTTGAA+TGG + chr1_3:45667442-45667461 None:intergenic 25.0%
! ATCATAAAGAACAAGAGTTT+GGG - chr1_3:45667660-45667679 Msa0120620:intron 25.0%
!!! TTCAATCTTTTGAAGAAACT+TGG - chr1_3:45668125-45668144 Msa0120620:CDS 25.0%
! GTATATCTTTCTGAACTAAT+TGG - chr1_3:45668167-45668186 Msa0120620:CDS 25.0%
!!! AGTAATGGACAATGAATTTT+TGG - chr1_3:45668214-45668233 Msa0120620:CDS 25.0%
!!! TTAGGATTTTGTTTTCCATT+TGG - chr1_3:45668469-45668488 Msa0120620:CDS 25.0%
!! CATTCTCATCAATCATATTT+TGG - chr1_3:45668548-45668567 Msa0120620:CDS 25.0%
!!! CAGAATCATATTTTTTACAG+TGG + chr1_3:45668657-45668676 None:intergenic 25.0%
!!! AAATTTTTAAGGTCTGAGTT+AGG - chr1_3:45668889-45668908 Msa0120620:CDS 25.0%
! TCAAACTTAAGGTTAAAGTA+TGG - chr1_3:45668920-45668939 Msa0120620:CDS 25.0%
! GAACTTTCAGAATTATTTGT+TGG + chr1_3:45669279-45669298 None:intergenic 25.0%
! TAAATAAAACAATTGCTCAC+TGG - chr1_3:45669370-45669389 Msa0120620:CDS 25.0%
! AGTCAATAAAATTGTAGTGA+TGG + chr1_3:45669453-45669472 None:intergenic 25.0%
! ACTTTACATGAAAACACATA+TGG - chr1_3:45669677-45669696 Msa0120620:five_prime_UTR 25.0%
! TCATTATTAGAACCTTTGAA+GGG + chr1_3:45670250-45670269 None:intergenic 25.0%
! TTCATTATTAGAACCTTTGA+AGG + chr1_3:45670251-45670270 None:intergenic 25.0%
!! TGTATTATGCTTTTTAGCAC+TGG + chr1_3:45665531-45665550 None:intergenic 30.0%
!!! TGTTTTGGAACTTCACTTTT+TGG - chr1_3:45665860-45665879 Msa0120620:CDS 30.0%
! ATCTCTTATTTACCCTTCTT+TGG - chr1_3:45666219-45666238 Msa0120620:CDS 30.0%
TCATTTGATAGACCAAAGAA+GGG + chr1_3:45666234-45666253 None:intergenic 30.0%
TTCATTTGATAGACCAAAGA+AGG + chr1_3:45666235-45666254 None:intergenic 30.0%
GTGACATAAAAACCTGATAA+TGG + chr1_3:45666498-45666517 None:intergenic 30.0%
GTCACATAAATGGTAAAGAA+AGG - chr1_3:45666513-45666532 Msa0120620:CDS 30.0%
TACTACATTGAATTTAGTGG+AGG - chr1_3:45666683-45666702 Msa0120620:intron 30.0%
GTTAAAAAAGCCAATGACAA+TGG - chr1_3:45666975-45666994 Msa0120620:intron 30.0%
AAGAGACCTATGTATATCTA+AGG - chr1_3:45667056-45667075 Msa0120620:intron 30.0%
ATGAAAAGGTTATCAAAGTC+CGG - chr1_3:45667096-45667115 Msa0120620:intron 30.0%
GATACAGACATTGTACAATT+CGG - chr1_3:45667149-45667168 Msa0120620:intron 30.0%
TTACTACTGTCAACATTAGA+AGG + chr1_3:45667201-45667220 None:intergenic 30.0%
TCTAATGTTGACAGTAGTAA+AGG - chr1_3:45667201-45667220 Msa0120620:intron 30.0%
CTAATGTTGACAGTAGTAAA+GGG - chr1_3:45667202-45667221 Msa0120620:intron 30.0%
!!! ATTTTGGCTCAATACACTTT+TGG + chr1_3:45667307-45667326 None:intergenic 30.0%
! ATTTTCTGCAACTGCAATTT+CGG + chr1_3:45667340-45667359 None:intergenic 30.0%
GAATGTTCATCAAGTAAAGT+TGG - chr1_3:45667393-45667412 Msa0120620:intron 30.0%
ATGTTCATCAAGTAAAGTTG+GGG - chr1_3:45667395-45667414 Msa0120620:intron 30.0%
! TTGAATGGGTTCTAATGATT+GGG + chr1_3:45667427-45667446 None:intergenic 30.0%
! TTTGAATGGGTTCTAATGAT+TGG + chr1_3:45667428-45667447 None:intergenic 30.0%
ATCATTAGAACCCATTCAAA+TGG - chr1_3:45667428-45667447 Msa0120620:intron 30.0%
GATTCTTCCCCTAAAAAATT+AGG - chr1_3:45667522-45667541 Msa0120620:intron 30.0%
! TAGGAAATAAAGCATCTACA+CGG - chr1_3:45667541-45667560 Msa0120620:intron 30.0%
TCCTCATCTACATCAATAAA+TGG - chr1_3:45667588-45667607 Msa0120620:intron 30.0%
!! TTATGATCGATTTTACTGCT+CGG + chr1_3:45667647-45667666 None:intergenic 30.0%
GATCATAAAGAACAAGAGTT+TGG - chr1_3:45667659-45667678 Msa0120620:intron 30.0%
TTATTTGCTTCATTTGACTG+GGG + chr1_3:45667729-45667748 None:intergenic 30.0%
GTTATTTGCTTCATTTGACT+GGG + chr1_3:45667730-45667749 None:intergenic 30.0%
! TGTTATTTGCTTCATTTGAC+TGG + chr1_3:45667731-45667750 None:intergenic 30.0%
TGTGAAATAGAAAACAGCAA+AGG - chr1_3:45667795-45667814 Msa0120620:intron 30.0%
GTTGCAAAAGTGAAAAAGAA+TGG - chr1_3:45667906-45667925 Msa0120620:intron 30.0%
! ACATGTCAAAGGATTTTAGA+TGG - chr1_3:45668051-45668070 Msa0120620:CDS 30.0%
!!! ACAATGAATTTTTGGCACAA+AGG - chr1_3:45668222-45668241 Msa0120620:CDS 30.0%
CATAACTAAGAACTACTGTT+CGG - chr1_3:45668439-45668458 Msa0120620:CDS 30.0%
CTACTGTTCGGTAATATATT+AGG - chr1_3:45668451-45668470 Msa0120620:CDS 30.0%
ATGATACAAATGTGACCAAA+TGG + chr1_3:45668487-45668506 None:intergenic 30.0%
AATCAAAATTCAAGTGTGCT+GGG + chr1_3:45668771-45668790 None:intergenic 30.0%
AGGCAAGATTTCATCATTAT+AGG + chr1_3:45668846-45668865 None:intergenic 30.0%
! AGGCTTATTTCTCAAACTTA+AGG - chr1_3:45668909-45668928 Msa0120620:CDS 30.0%
! ATGGTTTGTATGTAAACTCA+TGG - chr1_3:45668939-45668958 Msa0120620:CDS 30.0%
TATGTAAACTCATGGAACAA+TGG - chr1_3:45668947-45668966 Msa0120620:CDS 30.0%
ATGTAAACTCATGGAACAAT+GGG - chr1_3:45668948-45668967 Msa0120620:CDS 30.0%
! AATAATTCTGAAAGTTCCCT+AGG - chr1_3:45669282-45669301 Msa0120620:CDS 30.0%
AAAAAATTGCATGCACATAG+GGG + chr1_3:45669524-45669543 None:intergenic 30.0%
CAAAAAATTGCATGCACATA+GGG + chr1_3:45669525-45669544 None:intergenic 30.0%
TCAAAAAATTGCATGCACAT+AGG + chr1_3:45669526-45669545 None:intergenic 30.0%
GACAAAATTGCAGATCAAAA+GGG + chr1_3:45669635-45669654 None:intergenic 30.0%
TGACAAAATTGCAGATCAAA+AGG + chr1_3:45669636-45669655 None:intergenic 30.0%
TTCATGTAAAGTAGAAGGTT+TGG + chr1_3:45669669-45669688 None:intergenic 30.0%
! GTGTTTTCATGTAAAGTAGA+AGG + chr1_3:45669674-45669693 None:intergenic 30.0%
ACATGAAAACACATATGGAT+TGG - chr1_3:45669682-45669701 Msa0120620:five_prime_UTR 30.0%
! TTTCTGTACGAGCTTTTATA+TGG - chr1_3:45670217-45670236 Msa0120620:intron 30.0%
!! AAACTAACAAATGGACTATC+GGG + chr1_3:45670313-45670332 None:intergenic 30.0%
!! GAAACTAACAAATGGACTAT+CGG + chr1_3:45670314-45670333 None:intergenic 30.0%
! ATTTGTTAGTTTCCAAGCAA+GGG - chr1_3:45670321-45670340 Msa0120620:intron 30.0%
! TATTTAGAGTGTACTACAAC+AGG - chr1_3:45670550-45670569 Msa0120620:intron 30.0%
!!! TGGAATTTGAGTTGTTTTAG+AGG - chr1_3:45670581-45670600 Msa0120620:intron 30.0%
TACAACATAGGCTTACATAA+TGG + chr1_3:45670683-45670702 None:intergenic 30.0%
ACGGTAAAATGTGCTTTATA+AGG - chr1_3:45670722-45670741 Msa0120620:five_prime_UTR 30.0%
AAATGTGCTTTATAAGGTGT+AGG - chr1_3:45670728-45670747 Msa0120620:five_prime_UTR 30.0%
ATATTCAGCATAGGAATTGA+TGG + chr1_3:45670823-45670842 None:intergenic 30.0%
!! GGCACTGATAATTTAGTAGA+GGG + chr1_3:45665510-45665529 None:intergenic 35.0%
!! TGGCACTGATAATTTAGTAG+AGG + chr1_3:45665511-45665530 None:intergenic 35.0%
ATTTCAATGTGCTTACTTGC+AGG - chr1_3:45665724-45665743 Msa0120620:three_prime_UTR 35.0%
! CTTCATTGTTGTTGTGCATA+TGG - chr1_3:45665945-45665964 Msa0120620:CDS 35.0%
TGAACAAATCGAAACGACAA+GGG + chr1_3:45666154-45666173 None:intergenic 35.0%
TTGAACAAATCGAAACGACA+AGG + chr1_3:45666155-45666174 None:intergenic 35.0%
! TTTCAGTTTTTGCATCGTCT+TGG - chr1_3:45666448-45666467 Msa0120620:CDS 35.0%
TGGAGGAAATTATCTCCAAT+GGG - chr1_3:45666700-45666719 Msa0120620:intron 35.0%
TTGTGAAATTGTTGAAGCGA+GGG - chr1_3:45666738-45666757 Msa0120620:intron 35.0%
TTAGTACAGTGAAAGATGCA+AGG - chr1_3:45666767-45666786 Msa0120620:intron 35.0%
! TTTAACGCGCTTTTCAACTT+TGG + chr1_3:45666961-45666980 None:intergenic 35.0%
! CCTATGTATATCTAAGGCAT+CGG - chr1_3:45667062-45667081 Msa0120620:intron 35.0%
!! TATATCTAAGGCATCGGAAA+TGG - chr1_3:45667068-45667087 Msa0120620:intron 35.0%
GAGTTCAACTGAAATATCTC+CGG - chr1_3:45667224-45667243 Msa0120620:intron 35.0%
! TTTCGGAAGACTGAACATTT+TGG + chr1_3:45667323-45667342 None:intergenic 35.0%
CAGTTGCAGAAAATGAAACA+GGG - chr1_3:45667346-45667365 Msa0120620:intron 35.0%
AGTTGCAGAAAATGAAACAG+GGG - chr1_3:45667347-45667366 Msa0120620:intron 35.0%
TTCATTGATGCGAAGTGATT+TGG - chr1_3:45667371-45667390 Msa0120620:intron 35.0%
CAACTCTACTTTACTTCCAT+TGG + chr1_3:45667493-45667512 None:intergenic 35.0%
! TTAGGGGAAGAATCTTTTTC+AGG + chr1_3:45667516-45667535 None:intergenic 35.0%
! AATAAAGCATCTACACGGAA+AGG - chr1_3:45667546-45667565 Msa0120620:intron 35.0%
GCCATTTATTGATGTAGATG+AGG + chr1_3:45667592-45667611 None:intergenic 35.0%
!! TATGATCGATTTTACTGCTC+GGG + chr1_3:45667646-45667665 None:intergenic 35.0%
CAGCAAAGGTAATATAACAC+CGG - chr1_3:45667809-45667828 Msa0120620:intron 35.0%
AGCAAAGGTAATATAACACC+GGG - chr1_3:45667810-45667829 Msa0120620:intron 35.0%
TCAAGTTTATTCCATCTGCA+GGG + chr1_3:45667836-45667855 None:intergenic 35.0%
! TTCAAGTTTATTCCATCTGC+AGG + chr1_3:45667837-45667856 None:intergenic 35.0%
!!! AATGTCAGTGGTTCTAGTTT+TGG - chr1_3:45668017-45668036 Msa0120620:CDS 35.0%
CTAAAATCCTTTGACATGTG+AGG + chr1_3:45668050-45668069 None:intergenic 35.0%
!! CTTTTGAAGAAACTTGGTTG+TGG - chr1_3:45668131-45668150 Msa0120620:CDS 35.0%
AAGGGAAATATTACGAATGC+TGG - chr1_3:45668271-45668290 Msa0120620:CDS 35.0%
AAATCTGTCATGTCTTGTCA+TGG - chr1_3:45668337-45668356 Msa0120620:CDS 35.0%
!!! CATATTTTGGCATGTGTTTC+TGG - chr1_3:45668561-45668580 Msa0120620:CDS 35.0%
GAATCAAAATTCAAGTGTGC+TGG + chr1_3:45668772-45668791 None:intergenic 35.0%
ATGATGAAATCTTGCCTGTA+CGG - chr1_3:45668849-45668868 Msa0120620:CDS 35.0%
ATTATTGCACACCAAATGCA+TGG + chr1_3:45668985-45669004 None:intergenic 35.0%
!! ATGCATTTGGTGTGCAATAA+TGG - chr1_3:45668984-45669003 Msa0120620:CDS 35.0%
!! TGCATTTGGTGTGCAATAAT+GGG - chr1_3:45668985-45669004 Msa0120620:CDS 35.0%
!! AATAATGGGTGGCTCAATAA+AGG - chr1_3:45668999-45669018 Msa0120620:CDS 35.0%
TATGTCTGTCTTCATTGCAA+TGG + chr1_3:45669194-45669213 None:intergenic 35.0%
! TCGCAATTAAGGCAGATTTT+TGG - chr1_3:45669248-45669267 Msa0120620:CDS 35.0%
ACAAACAATTGCTTCTCCTA+GGG + chr1_3:45669301-45669320 None:intergenic 35.0%
AACAAACAATTGCTTCTCCT+AGG + chr1_3:45669302-45669321 None:intergenic 35.0%
TGACTTTATGTAGATTGCAC+TGG - chr1_3:45669468-45669487 Msa0120620:CDS 35.0%
CAAGTTGCAAATTGTTTCGA+TGG - chr1_3:45669592-45669611 Msa0120620:CDS 35.0%
! TGTTCTCTGGTTTCAAATCA+CGG + chr1_3:45669808-45669827 None:intergenic 35.0%
AACATTCTTGTTCGAGAAGA+CGG - chr1_3:45669824-45669843 Msa0120620:five_prime_UTR 35.0%
!! AAGATGATTTCAGAAGTGTC+GGG + chr1_3:45669898-45669917 None:intergenic 35.0%
! GAAGATGATTTCAGAAGTGT+CGG + chr1_3:45669899-45669918 None:intergenic 35.0%
GCAAGATCAAACTCATTTGT+TGG - chr1_3:45670115-45670134 Msa0120620:intron 35.0%
!! AACTAACAAATGGACTATCG+GGG + chr1_3:45670312-45670331 None:intergenic 35.0%
CTTGCTTGGAAACTAACAAA+TGG + chr1_3:45670322-45670341 None:intergenic 35.0%
! CATTTGTTAGTTTCCAAGCA+AGG - chr1_3:45670320-45670339 Msa0120620:intron 35.0%
AAGCAAGGGATCTTATCAAA+GGG - chr1_3:45670335-45670354 Msa0120620:intron 35.0%
ATGTTTCTCTTTGTCAACAG+TGG - chr1_3:45670604-45670623 Msa0120620:intron 35.0%
!! TGTTTCTGTGGATTCGTTTT+CGG - chr1_3:45670630-45670649 Msa0120620:five_prime_UTR 35.0%
AGATTCCTTCAGCATTTCCA+TGG - chr1_3:45665609-45665628 Msa0120620:three_prime_UTR 40.0%
AGCATTTCCATGGCAGTTTA+GGG - chr1_3:45665619-45665638 Msa0120620:three_prime_UTR 40.0%
ATCCACAATACAGAAGAAGC+AGG + chr1_3:45665682-45665701 None:intergenic 40.0%
AATGTGCTTACTTGCAGGTT+TGG - chr1_3:45665729-45665748 Msa0120620:three_prime_UTR 40.0%
AGGGATGTACACTTAAAGTC+TGG - chr1_3:45666533-45666552 Msa0120620:CDS 40.0%
! CTGGTTTGAATTCTGAAAGC+TGG - chr1_3:45666552-45666571 Msa0120620:CDS 40.0%
! GAATTCTGAAAGCTGGATTG+CGG - chr1_3:45666559-45666578 Msa0120620:CDS 40.0%
GTGGAGGAAATTATCTCCAA+TGG - chr1_3:45666699-45666718 Msa0120620:intron 40.0%
CTTGTGAAATTGTTGAAGCG+AGG - chr1_3:45666737-45666756 Msa0120620:intron 40.0%
ACACTATATCCTGAACTGGA+CGG + chr1_3:45666799-45666818 None:intergenic 40.0%
AGCTACACTATATCCTGAAC+TGG + chr1_3:45666803-45666822 None:intergenic 40.0%
!! TTTCTCTGAGATCTTCGTCA+AGG - chr1_3:45666905-45666924 Msa0120620:intron 40.0%
!! TTCTCTGAGATCTTCGTCAA+GGG - chr1_3:45666906-45666925 Msa0120620:intron 40.0%
GATTTGAGCTATCTACCAGA+TGG - chr1_3:45666928-45666947 Msa0120620:intron 40.0%
! AACTTTGGACTTGTTCCATC+TGG + chr1_3:45666946-45666965 None:intergenic 40.0%
CCGATGCCTTAGATATACAT+AGG + chr1_3:45667065-45667084 None:intergenic 40.0%
TGATATTCTTGGAGAAGCTC+CGG + chr1_3:45667118-45667137 None:intergenic 40.0%
AGCTTCTCCAAGAATATCAG+AGG - chr1_3:45667119-45667138 Msa0120620:intron 40.0%
GTACAATGTCTGTATCTTCC+CGG + chr1_3:45667145-45667164 None:intergenic 40.0%
GCAGTTGCAGAAAATGAAAC+AGG - chr1_3:45667345-45667364 Msa0120620:intron 40.0%
!! CTTCCATTGGTGTTACAACA+AGG + chr1_3:45667480-45667499 None:intergenic 40.0%
!! ATGATCGATTTTACTGCTCG+GGG + chr1_3:45667645-45667664 None:intergenic 40.0%
GGTAAGAAGAAACCAAAGCA+GGG - chr1_3:45667681-45667700 Msa0120620:intron 40.0%
TTGTTACAACCAGTTTGTGC+TGG + chr1_3:45667876-45667895 None:intergenic 40.0%
!!! GTGGTTCTAGTTTTGGCAAT+AGG - chr1_3:45668024-45668043 Msa0120620:CDS 40.0%
! CAAATGCAGCATGGAGTATT+AGG - chr1_3:45668092-45668111 Msa0120620:CDS 40.0%
AAACTTGGTTGTGGAGACAT+TGG - chr1_3:45668140-45668159 Msa0120620:CDS 40.0%
ACAAAGGAAGAAGATGCCTA+GGG - chr1_3:45668238-45668257 Msa0120620:CDS 40.0%
!! GCATAGAGTGTTGGAAGAAA+AGG + chr1_3:45668302-45668321 None:intergenic 40.0%
GTAAACTGTGCATAGAGTGT+TGG + chr1_3:45668311-45668330 None:intergenic 40.0%
TTAGTTATGTACCTTGCTGC+TGG + chr1_3:45668428-45668447 None:intergenic 40.0%
TTTAGCCAGTGCATTCAATG+AGG - chr1_3:45668584-45668603 Msa0120620:CDS 40.0%
CAAAACCTCATTGAATGCAC+TGG + chr1_3:45668592-45668611 None:intergenic 40.0%
AGTGAGTGGATACTTCACAA+CGG + chr1_3:45668801-45668820 None:intergenic 40.0%
AAGTATCCACTCACTCTTTC+TGG - chr1_3:45668806-45668825 Msa0120620:CDS 40.0%
TGATGAAATCTTGCCTGTAC+GGG - chr1_3:45668850-45668869 Msa0120620:CDS 40.0%
!! ACTCATGGAACAATGGGTTA+TGG - chr1_3:45668954-45668973 Msa0120620:CDS 40.0%
!! CTCATGGAACAATGGGTTAT+GGG - chr1_3:45668955-45668974 Msa0120620:CDS 40.0%
!! ATTTGGTGTGCAATAATGGG+TGG - chr1_3:45668988-45669007 Msa0120620:CDS 40.0%
TGCAATGAAGACAGACATAG+TGG - chr1_3:45669195-45669214 Msa0120620:CDS 40.0%
CTTAATTGCGACTAACTCTG+CGG + chr1_3:45669239-45669258 None:intergenic 40.0%
TCTACTAAACAGTGTGGAAC+TGG + chr1_3:45669562-45669581 None:intergenic 40.0%
CTACTGTCTACTAAACAGTG+TGG + chr1_3:45669568-45669587 None:intergenic 40.0%
ACGTAAAACCTGCACATACA+AGG + chr1_3:45669734-45669753 None:intergenic 40.0%
TCTCGAACAAGAATGTTCTC+TGG + chr1_3:45669821-45669840 None:intergenic 40.0%
!! CTGATTTTGACCTTTCACTC+AGG - chr1_3:45669861-45669880 Msa0120620:intron 40.0%
TTCTGATATAGATCCTGCCA+AGG - chr1_3:45669916-45669935 Msa0120620:intron 40.0%
CAAGATGGTTCAATGCAGAA+TGG + chr1_3:45669977-45669996 None:intergenic 40.0%
AAGCATGCAACTTGACAAGA+TGG + chr1_3:45669992-45670011 None:intergenic 40.0%
GAGTTTGATCTTGCATCTGT+GGG + chr1_3:45670109-45670128 None:intergenic 40.0%
TGAGTTTGATCTTGCATCTG+TGG + chr1_3:45670110-45670129 None:intergenic 40.0%
TATGGTAGAACACCCTTCAA+AGG - chr1_3:45670235-45670254 Msa0120620:intron 40.0%
! GAGATTTTGCAACACGACAT+TGG + chr1_3:45670284-45670303 None:intergenic 40.0%
CTTTGATAAGATCCCTTGCT+TGG + chr1_3:45670336-45670355 None:intergenic 40.0%
CAAGCAAGGGATCTTATCAA+AGG - chr1_3:45670334-45670353 Msa0120620:intron 40.0%
TAAAGAGCCTGAAAACCGAT+TGG - chr1_3:45670366-45670385 Msa0120620:intron 40.0%
AAAGAGCCTGAAAACCGATT+GGG - chr1_3:45670367-45670386 Msa0120620:intron 40.0%
! CGGATGTTGTTTAATCTCTG+CGG + chr1_3:45670407-45670426 None:intergenic 40.0%
TAAACAACATCCGTTCTTCG+AGG - chr1_3:45670414-45670433 Msa0120620:intron 40.0%
AAACAACATCCGTTCTTCGA+GGG - chr1_3:45670415-45670434 Msa0120620:intron 40.0%
AACTCGAATTCACAAAGGTC+CGG + chr1_3:45670484-45670503 None:intergenic 40.0%
! GACCTTTGTGAATTCGAGTT+GGG - chr1_3:45670484-45670503 Msa0120620:intron 40.0%
TTAGAGTGTACTACAACAGG+TGG - chr1_3:45670553-45670572 Msa0120620:intron 40.0%
! GTTTCTGTGGATTCGTTTTC+GGG - chr1_3:45670631-45670650 Msa0120620:five_prime_UTR 40.0%
TGTGCTTTATAAGGTGTAGG+AGG - chr1_3:45670731-45670750 Msa0120620:five_prime_UTR 40.0%
AACTGCCATGGAAATGCTGA+AGG + chr1_3:45665617-45665636 None:intergenic 45.0%
CAGCATTTCCATGGCAGTTT+AGG - chr1_3:45665618-45665637 Msa0120620:three_prime_UTR 45.0%
AGAGAAACCCTAAACTGCCA+TGG + chr1_3:45665629-45665648 None:intergenic 45.0%
CACCTGCTTCTTCTGTATTG+TGG - chr1_3:45665677-45665696 Msa0120620:three_prime_UTR 45.0%
AGGATATATCCGTCCAGTTC+AGG - chr1_3:45666787-45666806 Msa0120620:intron 45.0%
TCCTTGTATCCCAGTTTCAG+CGG + chr1_3:45666847-45666866 None:intergenic 45.0%
AATGCCTGCTTCAAAGTCAC+CGG + chr1_3:45667036-45667055 None:intergenic 45.0%
CGGAAATGGCTGCTATGAAA+AGG - chr1_3:45667082-45667101 Msa0120620:intron 45.0%
TCTCCAAGAATATCAGAGGC+CGG - chr1_3:45667123-45667142 Msa0120620:intron 45.0%
ATTCGGTAGTCACTGATGCT+AGG - chr1_3:45667166-45667185 Msa0120620:intron 45.0%
TCACTGATGCTAGGAGATCA+GGG - chr1_3:45667175-45667194 Msa0120620:intron 45.0%
AACTGAAATATCTCCGGTGC+TGG - chr1_3:45667230-45667249 Msa0120620:intron 45.0%
!! CCATTGGTGTTACAACAAGG+TGG + chr1_3:45667477-45667496 None:intergenic 45.0%
! CCACCTTGTTGTAACACCAA+TGG - chr1_3:45667474-45667493 Msa0120620:intron 45.0%
!! TGATCGATTTTACTGCTCGG+GGG + chr1_3:45667644-45667663 None:intergenic 45.0%
GGGTAAGAAGAAACCAAAGC+AGG - chr1_3:45667680-45667699 Msa0120620:intron 45.0%
CAAACAAGTGGAGTTGTAGC+AGG + chr1_3:45667762-45667781 None:intergenic 45.0%
CAACATCTCTCGCAAACAAG+TGG + chr1_3:45667774-45667793 None:intergenic 45.0%
CACTTGTTTGCGAGAGATGT+TGG - chr1_3:45667772-45667791 Msa0120620:intron 45.0%
CAAAGCTCAAAGAGTAGCCA+AGG - chr1_3:45667957-45667976 Msa0120620:CDS 45.0%
TACTACTGCTGTAGTCACCT+TGG + chr1_3:45667977-45667996 None:intergenic 45.0%
CAATAGGCCTCACATGTCAA+AGG - chr1_3:45668040-45668059 Msa0120620:CDS 45.0%
CTGCATTTGAGCATCTCGTA+TGG + chr1_3:45668081-45668100 None:intergenic 45.0%
CACAAAGGAAGAAGATGCCT+AGG - chr1_3:45668237-45668256 Msa0120620:CDS 45.0%
!! CTTGTCATGGAGTATTGTCC+TGG - chr1_3:45668350-45668369 Msa0120620:CDS 45.0%
AGAACATGAAGATCTCCTCC+AGG + chr1_3:45668371-45668390 None:intergenic 45.0%
GTTCTACGTCAGAAACAGCT+TGG - chr1_3:45668386-45668405 Msa0120620:CDS 45.0%
!! GTTTTTCAGAACCAGCAGCA+AGG - chr1_3:45668414-45668433 Msa0120620:CDS 45.0%
CGCACTGTTGCAGATTGTAT+AGG - chr1_3:45668716-45668735 Msa0120620:CDS 45.0%
! ATTCAAGTGTGCTGGGTTGA+GGG + chr1_3:45668764-45668783 None:intergenic 45.0%
AATTCAAGTGTGCTGGGTTG+AGG + chr1_3:45668765-45668784 None:intergenic 45.0%
ATCCACTCACTCTTTCTGGA+TGG - chr1_3:45668810-45668829 Msa0120620:CDS 45.0%
ATCCATCCAGAAAGAGTGAG+TGG + chr1_3:45668815-45668834 None:intergenic 45.0%
TAAGTGTATGTCACCCGTAC+AGG + chr1_3:45668866-45668885 None:intergenic 45.0%
TTGCACACCAAATGCATGGT+GGG + chr1_3:45668981-45669000 None:intergenic 45.0%
ATTGCACACCAAATGCATGG+TGG + chr1_3:45668982-45669001 None:intergenic 45.0%
!! TTTAAGTGTGCGGACTAGAG+GGG + chr1_3:45669121-45669140 None:intergenic 45.0%
!! CTTTAAGTGTGCGGACTAGA+GGG + chr1_3:45669122-45669141 None:intergenic 45.0%
! CAATCCTCGCTTTAAGTGTG+CGG + chr1_3:45669131-45669150 None:intergenic 45.0%
GCACACTTAAAGCGAGGATT+GGG - chr1_3:45669130-45669149 Msa0120620:CDS 45.0%
CGCAGAGTTAGTCGCAATTA+AGG - chr1_3:45669237-45669256 Msa0120620:CDS 45.0%
TGCTGAAGTCCTTCTTGCTT+TGG - chr1_3:45669754-45669773 Msa0120620:five_prime_UTR 45.0%
GCAAGTACTCCAAAGCAAGA+AGG + chr1_3:45669766-45669785 None:intergenic 45.0%
! TTGGAGTACTTGCACATGCT+CGG - chr1_3:45669773-45669792 Msa0120620:five_prime_UTR 45.0%
TAACGTCACACCTGAGTGAA+AGG + chr1_3:45669874-45669893 None:intergenic 45.0%
ATAGATCCTGCCAAGGTTTC+TGG - chr1_3:45669923-45669942 Msa0120620:intron 45.0%
TGCACATGTACCAGAAACCT+TGG + chr1_3:45669936-45669955 None:intergenic 45.0%
AGTCCTAGATTCTTACCACC+TGG - chr1_3:45670013-45670032 Msa0120620:intron 45.0%
GTCCTAGATTCTTACCACCT+GGG - chr1_3:45670014-45670033 Msa0120620:intron 45.0%
TCCTAGATTCTTACCACCTG+GGG - chr1_3:45670015-45670034 Msa0120620:intron 45.0%
CAGATCATTGCCACAACTTG+TGG - chr1_3:45670078-45670097 Msa0120620:intron 45.0%
! TCCCTCTCCTTTGATGATCT+CGG + chr1_3:45670161-45670180 None:intergenic 45.0%
ATCATCAAAGGAGAGGGACA+TGG - chr1_3:45670163-45670182 Msa0120620:intron 45.0%
!!! GCAGTTGATTGGTGGACTTT+TGG - chr1_3:45670190-45670209 Msa0120620:intron 45.0%
!! TCTGTACCCAATCGGTTTTC+AGG + chr1_3:45670376-45670395 None:intergenic 45.0%
AACCGATTGGGTACAGAGAA+AGG - chr1_3:45670379-45670398 Msa0120620:intron 45.0%
ACCGATTGGGTACAGAGAAA+GGG - chr1_3:45670380-45670399 Msa0120620:intron 45.0%
AACAACATCCGTTCTTCGAG+GGG - chr1_3:45670416-45670435 Msa0120620:intron 45.0%
CAATTAAGCCCCTCGAAGAA+CGG + chr1_3:45670427-45670446 None:intergenic 45.0%
GTTCTTCGAGGGGCTTAATT+GGG - chr1_3:45670426-45670445 Msa0120620:intron 45.0%
TGGGATAGCGCATCGTATTA+AGG + chr1_3:45670452-45670471 None:intergenic 45.0%
GGACCTTTGTGAATTCGAGT+TGG - chr1_3:45670483-45670502 Msa0120620:intron 45.0%
CTCCCAACTCGAATTCACAA+AGG + chr1_3:45670489-45670508 None:intergenic 45.0%
ATCGCACAGTCACAAAGCAA+GGG - chr1_3:45670520-45670539 Msa0120620:intron 45.0%
TACTACAACAGGTGGACAAG+TGG - chr1_3:45670561-45670580 Msa0120620:intron 45.0%
!! CAACAGTGGCATTGTTTCTG+TGG - chr1_3:45670618-45670637 Msa0120620:five_prime_UTR 45.0%
!!! TGGATTCGTTTTCGGGTCTA+TGG - chr1_3:45670638-45670657 Msa0120620:five_prime_UTR 45.0%
!!! GGATTCGTTTTCGGGTCTAT+GGG - chr1_3:45670639-45670658 Msa0120620:five_prime_UTR 45.0%
! ATCTCCAATGGGCTCGTACT+CGG - chr1_3:45666711-45666730 Msa0120620:intron 50.0%
AAGCTTCCTCCGCTGAAACT+GGG - chr1_3:45666835-45666854 Msa0120620:intron 50.0%
TTGTATCCCAGTTTCAGCGG+AGG + chr1_3:45666844-45666863 None:intergenic 50.0%
TCCGCTGAAACTGGGATACA+AGG - chr1_3:45666843-45666862 Msa0120620:intron 50.0%
CGAGGTACACCCATTGTCAT+TGG + chr1_3:45666988-45667007 None:intergenic 50.0%
CTCAGAAATCCCAACTCGTG+GGG + chr1_3:45667013-45667032 None:intergenic 50.0%
GCTCAGAAATCCCAACTCGT+GGG + chr1_3:45667014-45667033 None:intergenic 50.0%
! ACGAGTTGGGATTTCTGAGC+CGG - chr1_3:45667014-45667033 Msa0120620:intron 50.0%
CTCCAAGAATATCAGAGGCC+GGG - chr1_3:45667124-45667143 Msa0120620:intron 50.0%
TTCCCGGCCTCTGATATTCT+TGG + chr1_3:45667129-45667148 None:intergenic 50.0%
GTCACTGATGCTAGGAGATC+AGG - chr1_3:45667174-45667193 Msa0120620:intron 50.0%
! GACTTGCTTTCTTCCAGCAC+CGG + chr1_3:45667246-45667265 None:intergenic 50.0%
! GGTGCTGGAAGAAAGCAAGT+CGG - chr1_3:45667245-45667264 Msa0120620:intron 50.0%
CTGGAAGAAAGCAAGTCGGT+TGG - chr1_3:45667249-45667268 Msa0120620:intron 50.0%
CCAGAATCAGAACCCTGCTT+TGG + chr1_3:45667696-45667715 None:intergenic 50.0%
! CCAAAGCAGGGTTCTGATTC+TGG - chr1_3:45667693-45667712 Msa0120620:intron 50.0%
TTTATTCCATCTGCAGGGCC+CGG + chr1_3:45667831-45667850 None:intergenic 50.0%
! AACTTGAAGAGCGTGCTCTC+TGG - chr1_3:45667849-45667868 Msa0120620:intron 50.0%
! ACTTGAAGAGCGTGCTCTCT+GGG - chr1_3:45667850-45667869 Msa0120620:intron 50.0%
ACTGACATTACTCTCGTCGC+TGG + chr1_3:45668006-45668025 None:intergenic 50.0%
AGCGACGAGAGTAATGTCAG+TGG - chr1_3:45668005-45668024 Msa0120620:CDS 50.0%
CGAGATGCTCAAATGCAGCA+TGG - chr1_3:45668083-45668102 Msa0120620:CDS 50.0%
TGCCTAGGGCACAAACTGAA+AGG - chr1_3:45668252-45668271 Msa0120620:CDS 50.0%
GCCTAGGGCACAAACTGAAA+GGG - chr1_3:45668253-45668272 Msa0120620:CDS 50.0%
TCCCTTTCAGTTTGTGCCCT+AGG + chr1_3:45668257-45668276 None:intergenic 50.0%
!! GTCATGGAGTATTGTCCTGG+AGG - chr1_3:45668353-45668372 Msa0120620:CDS 50.0%
! TTCAAGTGTGCTGGGTTGAG+GGG + chr1_3:45668763-45668782 None:intergenic 50.0%
TTATGGGCCCACCATGCATT+TGG - chr1_3:45668971-45668990 Msa0120620:CDS 50.0%
!! GCTTTAAGTGTGCGGACTAG+AGG + chr1_3:45669123-45669142 None:intergenic 50.0%
TAGTCCGCACACTTAAAGCG+AGG - chr1_3:45669124-45669143 Msa0120620:CDS 50.0%
CGCACACTTAAAGCGAGGAT+TGG - chr1_3:45669129-45669148 Msa0120620:CDS 50.0%
CTGCGGCTGCACTATGTTAT+TGG + chr1_3:45669222-45669241 None:intergenic 50.0%
CCTGCACATACAAGGTTCTC+TGG + chr1_3:45669726-45669745 None:intergenic 50.0%
CCAGAGAACCTTGTATGTGC+AGG - chr1_3:45669723-45669742 Msa0120620:five_prime_UTR 50.0%
CATGTACCAGAAACCTTGGC+AGG + chr1_3:45669932-45669951 None:intergenic 50.0%
!! AGTTTCCTTGCTTTTGCCCC+AGG + chr1_3:45670034-45670053 None:intergenic 50.0%
! CTTTGATGATCTCGGGTGCT+AGG + chr1_3:45670153-45670172 None:intergenic 50.0%
CTAGCACCCGAGATCATCAA+AGG - chr1_3:45670151-45670170 Msa0120620:intron 50.0%
ACCCGAGATCATCAAAGGAG+AGG - chr1_3:45670156-45670175 Msa0120620:intron 50.0%
! CCCTCTCCTTTGATGATCTC+GGG + chr1_3:45670160-45670179 None:intergenic 50.0%
CCCGAGATCATCAAAGGAGA+GGG - chr1_3:45670157-45670176 Msa0120620:intron 50.0%
GACATGGAGCTGCAGTTGAT+TGG - chr1_3:45670179-45670198 Msa0120620:intron 50.0%
ATGGAGCTGCAGTTGATTGG+TGG - chr1_3:45670182-45670201 Msa0120620:intron 50.0%
CCCCTTTCTCTGTACCCAAT+CGG + chr1_3:45670384-45670403 None:intergenic 50.0%
CCGATTGGGTACAGAGAAAG+GGG - chr1_3:45670381-45670400 Msa0120620:intron 50.0%
CGTTCTTCGAGGGGCTTAAT+TGG - chr1_3:45670425-45670444 Msa0120620:intron 50.0%
! AAAGGTCCGGAAGTTCTGGT+GGG + chr1_3:45670471-45670490 None:intergenic 50.0%
TCACAAAGGTCCGGAAGTTC+TGG + chr1_3:45670475-45670494 None:intergenic 50.0%
GATCGCACAGTCACAAAGCA+AGG - chr1_3:45670519-45670538 Msa0120620:intron 50.0%
! TCTCCAATGGGCTCGTACTC+GGG - chr1_3:45666712-45666731 Msa0120620:intron 55.0%
GAAGCTTCCTCCGCTGAAAC+TGG - chr1_3:45666834-45666853 Msa0120620:intron 55.0%
TACCTCGATCCCCACGAGTT+GGG - chr1_3:45667001-45667020 Msa0120620:intron 55.0%
GGCTCAGAAATCCCAACTCG+TGG + chr1_3:45667015-45667034 None:intergenic 55.0%
!! TGAGCCGGTGACTTTGAAGC+AGG - chr1_3:45667029-45667048 Msa0120620:intron 55.0%
! ATTTTACTGCTCGGGGGCTG+TGG + chr1_3:45667638-45667657 None:intergenic 55.0%
! TCAAGTGTGCTGGGTTGAGG+GGG + chr1_3:45668762-45668781 None:intergenic 55.0%
GCCCCAGGTGGTAAGAATCT+AGG + chr1_3:45670019-45670038 None:intergenic 55.0%
TACCACCTGGGGCAAAAGCA+AGG - chr1_3:45670026-45670045 Msa0120620:intron 55.0%
!! TTCCTTGCTTTTGCCCCAGG+TGG + chr1_3:45670031-45670050 None:intergenic 55.0%
CGCTATCCCACCAGAACTTC+CGG - chr1_3:45670462-45670481 Msa0120620:intron 55.0%
! CAAAGGTCCGGAAGTTCTGG+TGG + chr1_3:45670472-45670491 None:intergenic 55.0%
GCACAGTCACAAAGCAAGGG+TGG - chr1_3:45670523-45670542 Msa0120620:intron 55.0%
GTTCCCGAGTACGAGCCCAT+TGG + chr1_3:45666718-45666737 None:intergenic 60.0%
GTACCTCGATCCCCACGAGT+TGG - chr1_3:45667000-45667019 Msa0120620:intron 60.0%
ATCCCAACTCGTGGGGATCG+AGG + chr1_3:45667006-45667025 None:intergenic 60.0%
ATAACACCGGGCCCTGCAGA+TGG - chr1_3:45667822-45667841 Msa0120620:intron 60.0%
CTCTCTGGGCCAGCACAAAC+TGG - chr1_3:45667864-45667883 Msa0120620:intron 60.0%
! CGGACTAGAGGGGATGGGTT+TGG + chr1_3:45669111-45669130 None:intergenic 60.0%
!! GTGTGCGGACTAGAGGGGAT+GGG + chr1_3:45669116-45669135 None:intergenic 60.0%
!! AGTGTGCGGACTAGAGGGGA+TGG + chr1_3:45669117-45669136 None:intergenic 60.0%
GTGGGCTCTGCCACAAGTTG+TGG + chr1_3:45670091-45670110 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 45665464 45670892 45665464 ID=Msa0120620;Name=Msa0120620
chr1_3 mRNA 45665464 45670892 45665464 ID=Msa0120620-mRNA-1;Parent=Msa0120620;Name=Msa0120620-mRNA-1;_AED=0.01;_eAED=0.01;_QI=495|1|1|1|0.5|0.33|3|292|857
chr1_3 exon 45665464 45666611 45665464 ID=Msa0120620-mRNA-1:exon:13687;Parent=Msa0120620-mRNA-1
chr1_3 exon 45667921 45669851 45667921 ID=Msa0120620-mRNA-1:exon:13686;Parent=Msa0120620-mRNA-1
chr1_3 exon 45670611 45670892 45670611 ID=Msa0120620-mRNA-1:exon:13685;Parent=Msa0120620-mRNA-1
chr1_3 five_prime_UTR 45670611 45670892 45670611 ID=Msa0120620-mRNA-1:five_prime_utr;Parent=Msa0120620-mRNA-1
chr1_3 five_prime_UTR 45669639 45669851 45669639 ID=Msa0120620-mRNA-1:five_prime_utr;Parent=Msa0120620-mRNA-1
chr1_3 CDS 45667921 45669638 45667921 ID=Msa0120620-mRNA-1:cds;Parent=Msa0120620-mRNA-1
chr1_3 CDS 45665756 45666611 45665756 ID=Msa0120620-mRNA-1:cds;Parent=Msa0120620-mRNA-1
chr1_3 three_prime_UTR 45665464 45665755 45665464 ID=Msa0120620-mRNA-1:three_prime_utr;Parent=Msa0120620-mRNA-1
Gene Sequence

>Msa0120620

ATGGGCTCGTACTCGGGAACTTGTGAAATTGTTGAAGCGAGGGATGACATTAGTACAGTGAAAGATGCAAGGATATATCCGTCCAGTTCAGGATATAGTGTAGCTGAGAAAAATCAGAAGCTTCCTCCGCTGAAACTGGGATACAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAAACAATTTCTCTGAGATCTTCGTCAAGGGATTTGAGCTATCTACCAGATGGAACAAGTCCAAAGTTGAAAAGCGCGTTAAAAAAGCCAATGACAATGGGTGTACCTCGATCCCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCCGGAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTAGTCACTGATGCTAGGAGATCAGGGCCTTCTAATGTTGACAGTAGTAAAGGGAGTTCAACTGAAATATCTCCGGTGCTGGAAGAAAGCAAGTCGGTTGGCTTGAATAAAGAATCACAATCTCTTCAAACTTCCAAAAGTGTATTGAGCCAAAATGTTCAGTCTTCCGAAATTGCAGTTGCAGAAAATGAAACAGGGGCTTCATTGATGCGAAGTGATTTGGAATGTTCATCAAGTAAAGTTGGGGTTTCATCCCAATCATTAGAACCCATTCAAATGGAAAAACAAATGTCTGCTTCTTCTCCACCTTGTTGTAACACCAATGGAAGTAAAGTAGAGTTGCCTGAAAAAGATTCTTCCCCTAAAAAATTAGGAAATAAAGCATCTACACGGAAAGGTATGTTGCAAACAACATCTTCCTCATCTACATCAATAAATGGCAATAGAGTGTGTAAACTTTCGCGCCACAGCCCCCGAGCAGTAAAATCGATCATAAAGAACAAGAGTTTGGGTAAGAAGAAACCAAAGCAGGGTTCTGATTCTGGTTTATATGTTCCCCAGTCAAATGAAGCAAATAACAAGTCAGTTCCTGCTACAACTCCACTTGTTTGCGAGAGATGTTGGTGTGAAATAGAAAACAGCAAAGGTAATATAACACCGGGCCCTGCAGATGGAATAAACTTGAAGAGCGTGCTCTCTGGGCCAGCACAAACTGGTTGTAACAACAGTAGAGAAGTTGCAAAAGTGAAAAAGAATGGCAGATTGAAAGAGCAGCTTGAATTTTCACAAAGCTCAAAGAGTAGCCAAGGTGACTACAGCAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGTGGTTCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGAGTATTAGGCTTGAGAAACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACCGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCACAAAGGAAGAAGATGCCTAGGGCACAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACACTCTATGCACAGTTTACATCAGAAAATCTGTCATGTCTTGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGTAGATGTTTTTCAGAACCAGCAGCAAGGTTTTACGTTGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTCGGAGTTGTTTACCGTGATTTGAAACCAGAGAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACTGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCGACACTTCTGAAATCATCTTCTGATATAGATCCTGCCAAGGTTTCTGGTACATGTGCAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGGGGCAAAAGCAAGGAAACTCAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAACTTGTGGCAGAGCCCACAGATGCAAGATCAAACTCATTTGTTGGTACTCATGAATACCTAGCACCCGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACTTTTGGTGTTTTTCTGTACGAGCTTTTATATGGTAGAACACCCTTCAAAGGTTCTAATAATGAAGAAACATTAGCCAATGTCGTGTTGCAAAATCTCAGATTCCCCGATAGTCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCAAAGGGTTGTTAGTTAAAGAGCCTGAAAACCGATTGGGTACAGAGAAAGGGGCCGCAGAGATTAAACAACATCCGTTCTTCGAGGGGCTTAATTGGGCCTTAATACGATGCGCTATCCCACCAGAACTTCCGGACCTTTGTGAATTCGAGTTGGGAGTTTCAGACATGATCGCACAGTCACAAAGCAAGGGTGGTAAATATTTAGAGTGTACTACAACAGGTGGACAAGTGGAATTTGAGTTGTTTTAG
Protein sequence

>Msa0120620

MGSYSGTCEIVEARDDISTVKDARIYPSSSGYSVAEKNQKLPPLKLGYKDNLDDDINKLFETISLRSSSRDLSYLPDGTSPKLKSALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSGASPRISEAGKIQTLYNSVVTDARRSGPSNVDSSKGSSTEISPVLEESKSVGLNKESQSLQTSKSVLSQNVQSSEIAVAENETGASLMRSDLECSSSKVGVSSQSLEPIQMEKQMSASSPPCCNTNGSKVELPEKDSSPKKLGNKASTRKGMLQTTSSSSTSINGNRVCKLSRHSPRAVKSIIKNKSLGKKKPKQGSDSGLYVPQSNEANNKSVPATTPLVCERCWCEIENSKGNITPGPADGINLKSVLSGPAQTGCNNSREVAKVKKNGRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSSFGNRPHMSKDFRWQAIRDAQMQHGVLGLRNFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLAQRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDIDPAKVSGTCAKSSCIEPFCIEPSCQVACFSPRFLPPGAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAQSQSKGGKYLECTTTGGQVEFELF*