AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072750 MtrunA17_Chr1g0179761 96.646 477 16 0 14 490 15 491 0.0 954
Msa0072750 MtrunA17_Chr4g0025141 80.349 229 41 1 262 490 15 239 7.35e-130 376
Msa0072750 MtrunA17_Chr4g0025101 62.948 251 53 2 240 490 5 215 1.39e-101 303
Msa0072750 MtrunA17_Chr4g0025131 71.818 220 54 4 22 240 3 215 5.10e-100 302
Msa0072750 MtrunA17_Chr2g0299681 37.028 397 214 13 79 471 41 405 9.53e-69 225
Msa0072750 MtrunA17_Chr4g0070981 35.872 407 227 12 70 471 28 405 2.44e-67 222
Msa0072750 MtrunA17_Chr2g0297261 34.606 393 229 9 79 471 34 398 3.35e-66 219
Msa0072750 MtrunA17_Chr8g0342861 35.533 394 224 11 79 471 41 405 4.43e-66 218
Msa0072750 MtrunA17_Chr2g0329931 36.456 395 219 12 79 471 41 405 4.77e-66 218
Msa0072750 MtrunA17_Chr7g0247191 34.163 442 243 15 44 471 105 512 3.75e-62 211
Msa0072750 MtrunA17_Chr7g0247221 35.062 405 225 13 71 471 135 505 6.28e-60 205
Msa0072750 MtrunA17_Chr7g0247181 33.921 454 248 16 22 471 97 502 6.89e-60 205
Msa0072750 MtrunA17_Chr4g0003441 30.097 412 236 11 77 474 106 479 9.63e-49 174
Msa0072750 MtrunA17_Chr6g0483491 31.830 399 232 14 79 470 10 375 1.09e-40 151
Msa0072750 MtrunA17_Chr1g0149251 30.028 353 224 6 120 471 2 332 1.67e-40 149
Msa0072750 MtrunA17_Chr7g0236841 31.078 399 235 14 79 470 10 375 9.60e-40 149
Msa0072750 MtrunA17_Chr7g0270131 29.630 378 232 12 79 449 232 582 3.40e-39 151
Msa0072750 MtrunA17_Chr1g0200181 30.827 399 208 14 101 474 166 521 3.94e-39 149
Msa0072750 MtrunA17_Chr5g0409981 30.946 391 229 10 64 442 89 450 1.04e-38 147
Msa0072750 MtrunA17_Chr1g0157691 30.000 420 225 15 80 474 148 523 1.26e-38 148
Msa0072750 MtrunA17_Chr2g0277821 33.243 367 199 14 99 451 523 857 2.14e-38 149
Msa0072750 MtrunA17_Chr2g0330401 30.748 361 210 12 99 449 115 445 2.37e-38 146
Msa0072750 MtrunA17_Chr3g0121351 29.698 431 236 15 47 446 115 509 3.04e-37 144
Msa0072750 MtrunA17_Chr4g0063551 29.847 392 213 14 80 442 141 499 8.88e-37 144
Msa0072750 MtrunA17_Chr2g0293631 28.708 418 239 15 67 469 483 856 1.17e-36 144
Msa0072750 MtrunA17_Chr7g0271121 30.239 377 211 11 119 478 143 484 1.75e-36 143
Msa0072750 MtrunA17_Chr1g0176041 29.508 427 239 13 48 446 125 517 5.40e-36 141
Msa0072750 MtrunA17_Chr7g0263771 28.873 426 263 14 26 442 75 469 8.30e-36 140
Msa0072750 MtrunA17_Chr2g0310581 30.479 397 244 11 57 448 31 400 1.13e-34 136
Msa0072750 MtrunA17_Chr1g0169331 29.126 412 222 16 99 471 10 390 3.98e-34 132
Msa0072750 MtrunA17_Chr6g0449911 28.293 410 237 15 70 462 156 525 7.90e-34 135
Msa0072750 MtrunA17_Chr8g0347161 28.601 479 255 20 14 442 16 457 1.32e-33 134
Msa0072750 MtrunA17_Chr4g0040761 29.659 381 227 13 80 451 20 368 1.34e-33 135
Msa0072750 MtrunA17_Chr5g0442191 27.540 374 221 10 119 477 118 456 4.88e-33 132
Msa0072750 MtrunA17_Chr1g0193491 28.954 373 222 13 119 478 151 493 4.99e-33 132
Msa0072750 MtrunA17_Chr6g0475251 30.380 395 220 11 96 471 119 477 5.53e-33 132
Msa0072750 MtrunA17_Chr3g0095031 27.551 392 227 13 107 477 110 465 7.03e-33 131
Msa0072750 MtrunA17_Chr3g0107851 27.861 402 240 15 79 462 117 486 1.02e-32 131
Msa0072750 MtrunA17_Chr8g0342851 29.444 360 198 11 116 471 4 311 7.21e-32 124
Msa0072750 MtrunA17_Chr4g0076491 28.861 395 230 12 79 449 287 654 5.74e-31 127
Msa0072750 MtrunA17_Chr1g0204391 28.744 414 224 11 105 483 69 446 1.17e-30 125
Msa0072750 MtrunA17_Chr8g0347151 28.784 403 237 14 61 442 183 556 1.27e-30 125
Msa0072750 MtrunA17_Chr8g0347171 28.317 505 264 22 4 442 43 515 1.74e-30 125
Msa0072750 MtrunA17_Chr2g0300291 28.117 409 243 12 76 469 138 510 2.32e-30 125
Msa0072750 MtrunA17_Chr3g0098121 28.148 405 247 12 76 469 149 520 3.09e-30 124
Msa0072750 MtrunA17_Chr6g0449741 28.212 397 228 13 79 449 249 614 2.82e-29 121
Msa0072750 MtrunA17_Chr6g0461751 27.660 376 229 11 79 442 140 484 2.28e-28 118
Msa0072750 MtrunA17_Chr8g0386451 28.046 435 231 16 76 479 285 668 2.14e-27 116
Msa0072750 MtrunA17_Chr2g0309551 26.739 460 235 19 71 464 102 525 3.28e-27 114
Msa0072750 MtrunA17_Chr4g0034411 26.652 454 287 17 26 461 13 438 4.87e-27 115
Msa0072750 MtrunA17_Chr4g0058591 27.246 334 222 10 79 405 202 521 1.03e-25 110
Msa0072750 MtrunA17_Chr1g0192021 25.647 425 228 15 79 448 26 417 6.88e-25 108
Msa0072750 MtrunA17_Chr5g0443991 26.396 394 249 13 74 451 63 431 3.60e-24 106
Msa0072750 MtrunA17_Chr4g0062301 27.792 403 240 15 95 482 112 478 4.44e-24 105
Msa0072750 MtrunA17_Chr7g0236831 25.112 446 229 16 79 448 163 579 8.95e-24 105
Msa0072750 MtrunA17_Chr2g0307471 27.676 383 240 14 76 448 88 443 2.78e-22 100
Msa0072750 MtrunA17_Chr6g0466611 26.988 415 233 16 79 462 142 517 8.05e-22 99.0
Msa0072750 MtrunA17_Chr3g0137901 32.168 143 83 1 329 471 40 168 1.25e-21 92.0
Msa0072750 MtrunA17_Chr2g0301281 25.541 462 247 18 76 463 38 476 4.36e-21 96.7
Msa0072750 MtrunA17_Chr4g0029191 25.813 461 247 18 76 463 41 479 5.64e-21 96.3
Msa0072750 MtrunA17_Chr3g0114081 25.062 403 231 17 76 442 11 378 6.21e-19 89.7
Msa0072750 MtrunA17_Chr5g0429221 24.433 397 254 14 79 465 3 363 7.34e-19 88.6
Msa0072750 MtrunA17_Chr4g0004301 24.173 393 213 15 119 448 70 440 8.64e-17 82.8
Msa0072750 MtrunA17_Chr5g0434301 23.919 393 214 15 119 448 70 440 3.27e-16 81.3
Msa0072750 MtrunA17_Chr3g0145781 25.339 442 253 20 48 452 110 511 5.22e-15 77.4
Msa0072750 MtrunA17_Chr8g0354761 25.654 382 228 15 80 442 9 353 5.93e-15 77.0
Msa0072750 MtrunA17_Chr4g0074521 26.064 376 212 18 96 437 98 441 1.19e-13 73.2
Msa0072750 MtrunA17_Chr8g0349951 33.758 157 91 6 79 230 10 158 3.82e-13 67.4
Msa0072750 MtrunA17_Chr3g0137891 30.120 166 93 3 120 275 2 154 7.99e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072750 AT3G53110.1 63.299 485 157 7 7 489 29 494 0.0 604
Msa0072750 AT1G72730.1 35.561 419 233 13 61 471 17 406 1.27e-69 228
Msa0072750 AT3G19760.1 34.383 413 238 11 60 471 20 400 3.66e-66 219
Msa0072750 AT3G13920.3 35.533 394 224 11 79 471 30 394 4.26e-65 216
Msa0072750 AT3G13920.1 35.533 394 224 11 79 471 40 404 4.48e-65 216
Msa0072750 AT1G54270.1 35.279 394 225 11 79 471 40 404 1.99e-63 212
Msa0072750 AT3G13920.4 35.279 394 220 11 79 471 40 399 2.25e-63 211
Msa0072750 AT4G00660.1 34.676 447 244 15 39 471 82 494 1.35e-62 212
Msa0072750 AT4G00660.2 34.676 447 244 15 39 471 82 494 1.35e-62 212
Msa0072750 AT3G13920.5 35.958 381 214 11 79 458 44 395 3.31e-62 209
Msa0072750 AT3G13920.2 35.958 381 214 11 79 458 40 391 3.89e-62 209
Msa0072750 AT1G54270.2 35.025 394 221 11 79 471 40 399 1.10e-61 207
Msa0072750 AT3G61240.2 34.475 467 253 17 9 471 70 487 1.50e-61 209
Msa0072750 AT3G61240.1 34.475 467 253 17 9 471 70 487 1.50e-61 209
Msa0072750 AT2G45810.1 34.081 446 254 14 30 471 108 517 8.24e-60 205
Msa0072750 AT1G51380.1 32.401 429 244 13 44 471 4 387 1.15e-58 199
Msa0072750 AT5G11170.1 30.000 420 265 10 57 474 26 418 5.86e-48 171
Msa0072750 AT5G11200.1 30.000 420 265 10 57 474 26 418 5.86e-48 171
Msa0072750 AT5G11200.3 28.322 459 263 12 57 474 26 459 3.31e-42 156
Msa0072750 AT5G11170.2 29.494 356 228 6 120 474 2 335 1.31e-41 152
Msa0072750 AT5G11200.2 27.848 474 264 13 57 474 26 477 7.23e-41 153
Msa0072750 AT3G01540.1 27.872 470 287 17 1 462 94 519 1.60e-39 151
Msa0072750 AT3G01540.4 27.872 470 287 17 1 462 94 519 1.83e-39 151
Msa0072750 AT3G01540.2 27.872 470 287 17 1 462 94 519 1.83e-39 151
Msa0072750 AT3G01540.3 27.872 470 287 17 1 462 94 519 1.83e-39 151
Msa0072750 AT5G51280.1 31.407 398 207 15 101 474 168 523 2.24e-39 150
Msa0072750 AT2G42520.2 30.120 415 224 14 63 446 144 523 2.35e-39 151
Msa0072750 AT2G42520.1 30.120 415 224 14 63 446 144 523 2.35e-39 151
Msa0072750 AT2G42520.3 30.120 415 224 14 63 446 144 523 2.35e-39 151
Msa0072750 AT4G33370.1 31.486 397 206 14 102 474 120 474 3.64e-39 149
Msa0072750 AT5G14610.5 30.022 453 268 19 18 462 119 530 7.27e-39 150
Msa0072750 AT5G14610.6 30.022 453 268 19 18 462 111 522 7.98e-39 150
Msa0072750 AT5G14610.2 30.022 453 268 19 18 462 111 522 8.53e-39 149
Msa0072750 AT1G20920.2 32.329 365 205 13 96 448 208 542 1.26e-38 150
Msa0072750 AT3G22310.2 28.436 422 245 14 82 486 120 501 1.38e-38 148
Msa0072750 AT3G22310.1 28.436 422 245 14 82 486 120 501 1.58e-38 148
Msa0072750 AT1G20920.4 32.329 365 205 13 97 449 547 881 3.23e-38 149
Msa0072750 AT1G20920.6 32.329 365 205 13 97 449 547 881 3.23e-38 149
Msa0072750 AT1G20920.3 32.329 365 205 13 97 449 547 881 3.23e-38 149
Msa0072750 AT1G20920.7 32.329 365 205 13 97 449 547 881 3.23e-38 149
Msa0072750 AT1G20920.5 32.329 365 205 13 97 449 547 881 3.23e-38 149
Msa0072750 AT1G20920.1 32.329 365 205 13 97 449 547 881 3.23e-38 149
Msa0072750 AT5G63120.2 29.443 377 229 13 80 448 167 514 5.32e-38 147
Msa0072750 AT3G06480.1 30.789 393 239 12 68 455 425 789 7.65e-38 148
Msa0072750 AT1G31970.1 30.303 396 226 12 64 442 102 464 1.76e-37 144
Msa0072750 AT3G58570.1 29.512 410 223 15 68 446 136 510 2.20e-37 145
Msa0072750 AT1G16280.1 32.297 418 244 14 75 482 55 443 2.91e-37 143
Msa0072750 AT5G60990.1 31.387 411 228 15 79 470 10 385 3.13e-37 142
Msa0072750 AT3G22330.1 27.553 421 248 14 82 485 108 488 1.23e-36 143
Msa0072750 AT1G77030.1 29.211 380 230 13 80 451 30 378 9.15e-36 142
Msa0072750 AT5G14610.1 30.541 370 223 14 99 462 249 590 1.71e-35 140
Msa0072750 AT5G14610.7 30.319 376 228 14 93 462 44 391 2.14e-35 138
Msa0072750 AT5G14610.3 30.319 376 228 14 93 462 44 391 2.14e-35 138
Msa0072750 AT2G47330.1 28.042 378 238 12 79 449 229 579 6.27e-35 139
Msa0072750 AT3G58510.1 28.747 407 227 15 68 446 142 513 1.51e-34 137
Msa0072750 AT3G58510.3 28.747 407 227 15 68 446 142 513 1.51e-34 137
Msa0072750 AT3G58510.2 28.747 407 227 15 68 446 142 513 1.51e-34 137
Msa0072750 AT3G09720.2 29.086 361 215 10 89 442 152 478 1.75e-34 136
Msa0072750 AT3G09720.1 29.086 361 215 10 89 442 152 478 1.75e-34 136
Msa0072750 AT1G55150.1 28.382 377 232 11 99 465 119 467 4.87e-34 134
Msa0072750 AT1G55150.2 28.647 377 231 12 99 465 144 492 8.93e-34 134
Msa0072750 AT5G26742.1 28.418 373 225 11 119 478 140 483 1.23e-33 135
Msa0072750 AT5G26742.2 28.418 373 225 11 119 478 140 483 1.23e-33 135
Msa0072750 AT5G08620.1 29.877 405 224 17 64 442 66 436 1.27e-33 134
Msa0072750 AT5G26742.3 28.418 373 225 11 119 478 47 390 2.11e-33 134
Msa0072750 AT5G62190.1 30.400 375 216 12 105 465 122 465 7.04e-32 129
Msa0072750 AT1G28180.1 31.143 350 199 12 114 451 6 325 5.43e-31 123
Msa0072750 AT2G33730.1 28.788 396 229 13 79 449 314 681 5.94e-31 127
Msa0072750 AT3G09620.2 30.446 381 193 15 80 448 399 719 1.08e-30 127
Msa0072750 AT3G09620.1 30.446 381 193 15 80 448 398 718 1.13e-30 127
Msa0072750 AT1G12770.2 26.464 461 235 15 72 465 104 527 1.73e-30 125
Msa0072750 AT1G12770.1 26.464 461 235 15 72 465 104 527 1.73e-30 125
Msa0072750 AT3G18600.1 28.266 467 282 15 19 472 28 454 5.23e-30 123
Msa0072750 AT5G14610.4 29.412 408 252 18 18 417 119 498 6.71e-30 122
Msa0072750 AT5G08610.1 29.545 396 217 17 74 442 378 738 9.75e-30 124
Msa0072750 AT5G63630.1 28.866 388 230 12 74 442 50 410 1.44e-29 122
Msa0072750 AT5G63630.2 28.866 388 230 12 74 442 244 604 3.00e-29 122
Msa0072750 AT4G16630.1 28.465 404 245 12 77 469 166 536 4.86e-29 121
Msa0072750 AT3G02065.3 29.319 382 228 12 79 448 111 462 8.91e-29 119
Msa0072750 AT3G02065.2 29.319 382 228 12 79 448 111 462 8.91e-29 119
Msa0072750 AT3G06480.2 29.825 342 222 10 67 403 424 752 9.43e-29 120
Msa0072750 AT5G54910.1 26.905 420 258 17 59 461 47 434 2.84e-28 119
Msa0072750 AT1G51380.2 30.576 278 175 9 68 344 15 275 4.75e-28 113
Msa0072750 AT5G63120.1 28.793 323 207 12 80 394 167 474 1.04e-27 116
Msa0072750 AT5G63120.3 28.793 323 207 12 80 394 167 474 1.12e-27 115
Msa0072750 AT5G63120.4 28.793 323 207 12 80 394 167 474 1.12e-27 115
Msa0072750 AT5G63120.5 28.793 323 207 12 80 394 167 474 1.12e-27 115
Msa0072750 AT5G65900.1 28.346 381 234 14 72 442 148 499 2.14e-27 116
Msa0072750 AT3G02065.1 29.762 336 197 10 119 442 11 319 4.68e-25 106
Msa0072750 AT1G63250.1 28.934 394 233 16 76 449 326 692 1.29e-23 105
Msa0072750 AT2G07750.1 27.750 400 228 16 76 448 373 738 2.79e-22 101
Msa0072750 AT2G40700.1 26.244 442 230 18 76 442 28 448 6.12e-22 99.8
Msa0072750 AT4G09730.1 27.952 415 227 20 80 462 114 488 1.90e-21 98.2
Msa0072750 AT1G51380.4 28.571 259 156 9 44 301 4 234 4.68e-20 90.9
Msa0072750 AT1G51380.3 28.571 259 156 9 44 301 4 234 6.65e-20 90.9
Msa0072750 AT3G16840.2 26.802 444 225 16 78 448 191 607 8.20e-20 93.6
Msa0072750 AT3G16840.1 26.802 444 225 16 78 448 190 606 8.88e-20 93.2
Msa0072750 AT5G05450.1 25.260 384 247 11 78 442 14 376 9.09e-16 80.5
Msa0072750 AT3G06980.1 25.682 440 263 20 46 451 343 752 1.93e-15 79.7

Find 156 sgRNAs with CRISPR-Local

Find 548 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATTGTTTAGGTTAATT+TGG 0.187218 1_2:+45804349 Msa0072750:intron
GTTGGTAGGGCTGGGCGATT+TGG 0.187734 1_2:+45804461 Msa0072750:CDS
TGTTGCATTGTTATATTAAA+AGG 0.201880 1_2:+45806296 Msa0072750:three_prime_UTR
TACTAGAGAGTTGGCTATTC+AGG 0.203921 1_2:+45799755 Msa0072750:CDS
GGCTTGATCGGCCCAGCTTT+TGG 0.211747 1_2:-45799219 None:intergenic
AAAGCACTTTCAAATCTTAA+AGG 0.220948 1_2:-45799029 None:intergenic
AAAGATTATATATTTGAAAT+AGG 0.235592 1_2:+45804021 Msa0072750:CDS
TTTGGCTTCAATGTTTATTA+TGG 0.240624 1_2:+45805899 Msa0072750:three_prime_UTR
TTGCACAGGGTTGGTAGGGC+TGG 0.257464 1_2:+45804452 Msa0072750:CDS
ATTTGAAGCTCCGGTGGGTT+AGG 0.264819 1_2:-45799152 None:intergenic
CATAATCAGGCTCTTGTTCT+TGG 0.272275 1_2:-45804421 None:intergenic
TACAAGGGTTGTTGGGAAAA+AGG 0.274239 1_2:+45803897 Msa0072750:CDS
GGGTTGAAATACAATAAATA+AGG 0.283461 1_2:+45806247 Msa0072750:three_prime_UTR
ACACCATGGATTCTTTAAAT+AGG 0.290423 1_2:-45805984 None:intergenic
CATCCCTTTCACCACATATC+AGG 0.299190 1_2:-45805499 None:intergenic
ATACACCCTGGTTTAGGTTT+TGG 0.300061 1_2:+45805866 Msa0072750:three_prime_UTR
CACAAAGCTCTTGTTGATTT+AGG 0.301798 1_2:+45804102 Msa0072750:CDS
ATTCAATTCCGCCATCAAAA+AGG 0.310135 1_2:+45800699 Msa0072750:CDS
TGCTGTAATCAAAGAAATTC+AGG 0.314469 1_2:-45805805 None:intergenic
ATAACAACCTGCGCCATAAT+AGG 0.316481 1_2:-45800725 None:intergenic
TTGGTAGGGCTGGGCGATTT+GGG 0.326658 1_2:+45804462 Msa0072750:CDS
ATTATGGCGCAGGTTGTTAT+TGG 0.328812 1_2:+45800728 Msa0072750:CDS
ATGGATATACACCCTGGTTT+AGG 0.334244 1_2:+45805860 Msa0072750:three_prime_UTR
CGCTGTAATGTTGGTGTCGT+CGG 0.335543 1_2:-45799357 None:intergenic
TTAATCTTGGGATGCTTAGT+AGG 0.349931 1_2:+45799688 Msa0072750:CDS
GCTTGAGGAGCTTGCAGATT+GGG 0.351974 1_2:-45799717 None:intergenic
GCTCAAGCACATAATGGTTC+TGG 0.353478 1_2:+45799651 Msa0072750:CDS
AAGCACTTTCAAATCTTAAA+GGG 0.354637 1_2:-45799028 None:intergenic
TTTGAATCTCTAAAAGTTGA+AGG 0.362058 1_2:+45805760 Msa0072750:exon
GGCGGAGGTGGAGGTTTGAT+TGG 0.363101 1_2:-45799252 None:intergenic
GCTCCGGTGGGTTAGGGTTA+CGG 0.364056 1_2:-45799145 None:intergenic
GGTTTCGTCGGCGGCGGAGG+TGG 0.370257 1_2:-45799264 None:intergenic
GTCGGGATCATCTAGAGATT+TGG 0.370263 1_2:-45799339 None:intergenic
TGCAAATACACCTCATAATC+AGG 0.379608 1_2:-45804434 None:intergenic
ATTTAATCCCTGTATGAGAT+TGG 0.381678 1_2:+45806010 Msa0072750:three_prime_UTR
TCAAATGTGCGTACAAACTT+TGG 0.381760 1_2:+45805956 Msa0072750:three_prime_UTR
AGAGGTTTCGTCGGCGGCGG+AGG 0.385106 1_2:-45799267 None:intergenic
TTGATTGCTCAAGCACATAA+TGG 0.389125 1_2:+45799645 Msa0072750:CDS
TTGAGGAGTGTTCGCGACTT+GGG 0.389607 1_2:-45799076 None:intergenic
TGCACAGGGTTGGTAGGGCT+GGG 0.404676 1_2:+45804453 Msa0072750:CDS
TGGCAGTGGAGGAGAGGTGG+TGG 0.404758 1_2:-45799195 None:intergenic
TTCGTCGGCGGCGGAGGTGG+AGG 0.405769 1_2:-45799261 None:intergenic
CGCATAAACCAATCTCATAC+AGG 0.411176 1_2:-45806018 None:intergenic
CTCCACTGCCATCCAAAAGC+TGG 0.412253 1_2:+45799207 Msa0072750:CDS
GGTTGAAATACAATAAATAA+GGG 0.416018 1_2:+45806248 Msa0072750:three_prime_UTR
CTCAGAATGTGCAGTTCCTA+TGG 0.418718 1_2:+45800667 Msa0072750:CDS
CAGGTTGTTATTGGTACTCC+TGG 0.424362 1_2:+45800737 Msa0072750:CDS
GGCTGGGCGATTTGGGCGCA+AGG 0.424800 1_2:+45804469 Msa0072750:CDS
ATCAAATTCTTAATTGTGCC+AGG 0.425276 1_2:-45800755 None:intergenic
GTTGAGGAGTGTTCGCGACT+TGG 0.426686 1_2:-45799077 None:intergenic
GCTGTAATGTTGGTGTCGTC+GGG 0.427170 1_2:-45799356 None:intergenic
GAGATTCAATTCAAGCTGTC+AGG 0.429705 1_2:+45801747 Msa0072750:CDS
CCGTGGCTTTGATCAGCAAC+AGG 0.433702 1_2:+45804236 Msa0072750:CDS
CAGGCTCTTGTTCTTGGCCA+CGG 0.435431 1_2:-45804415 None:intergenic
AAAGTTGCTCTTAAAGAAGC+TGG 0.440458 1_2:+45805729 Msa0072750:CDS
TTTGAAGCTCCGGTGGGTTA+GGG 0.442904 1_2:-45799151 None:intergenic
GGTTTCTTCGTCGGCTTGAT+CGG 0.446945 1_2:-45799231 None:intergenic
TGTATTTGCACAGGGTTGGT+AGG 0.446992 1_2:+45804447 Msa0072750:CDS
TTGATTACTTATAAGAAACT+TGG 0.451832 1_2:+45800773 Msa0072750:CDS
AACGTCGTGGCGGATGTGTA+AGG 0.453744 1_2:-45799501 None:intergenic
ATGGTCAAGAGCACCTTGTA+TGG 0.458366 1_2:-45804139 None:intergenic
AAGGATCTTGCTAGCGGTGT+TGG 0.466036 1_2:+45805779 Msa0072750:three_prime_UTR
GTTTCATCAACAGTAGTAGT+TGG 0.467087 1_2:+45806205 Msa0072750:three_prime_UTR
GGATGGCAGTGGAGGAGAGG+TGG 0.468980 1_2:-45799198 None:intergenic
GGTTTGATTGGTTTCTTCGT+CGG 0.469217 1_2:-45799240 None:intergenic
CATTGAGGTTCTCCGTAAGA+TGG 0.469249 1_2:+45800625 Msa0072750:CDS
TCAATCTTAGCAAGCTCGTC+AGG 0.469456 1_2:-45803991 None:intergenic
GTATTTGCACAGGGTTGGTA+GGG 0.470296 1_2:+45804448 Msa0072750:CDS
ATCATTGACGTTGAGGGAAG+AGG 0.471693 1_2:-45799285 None:intergenic
GGAAGAGGTTTCGTCGGCGG+CGG 0.471697 1_2:-45799270 None:intergenic
TGAATAGCCAACTCTCTAGT+AGG 0.472110 1_2:-45799753 None:intergenic
AGGCTCTTGTTCTTGGCCAC+GGG 0.481618 1_2:-45804414 None:intergenic
ATTTCGGTGCAGGTTACAGC+TGG 0.482756 1_2:+45799471 Msa0072750:intron
TGAGGAGTGTTCGCGACTTG+GGG 0.486667 1_2:-45799075 None:intergenic
ATCGTCAAAGAGTTCAAAGA+TGG 0.487343 1_2:+45804177 Msa0072750:CDS
ATTGAGGTTCTCCGTAAGAT+GGG 0.491851 1_2:+45800626 Msa0072750:CDS
TAATCTTGGGATGCTTAGTA+GGG 0.492378 1_2:+45799689 Msa0072750:CDS
CCGTGTACTTCCCCATCTTA+CGG 0.493677 1_2:-45800637 None:intergenic
ATTATGAGGTGTATTTGCAC+AGG 0.499481 1_2:+45804438 Msa0072750:CDS
ATGTGGAGGATTAAGAATCA+TGG 0.501190 1_2:-45799616 None:intergenic
TCCACTGCCATCCAAAAGCT+GGG 0.503491 1_2:+45799208 Msa0072750:CDS
GGTTAAATCATTGACGTTGA+GGG 0.507404 1_2:-45799291 None:intergenic
CGTAAGATGGGGAAGTACAC+GGG 0.512273 1_2:+45800638 Msa0072750:CDS
TCTTGTTGATTTAGGCTATG+AGG 0.514061 1_2:+45804110 Msa0072750:CDS
GATTCTTAATCCTCCACATA+GGG 0.514959 1_2:+45799620 Msa0072750:CDS
AGCTTGAGGAGCTTGCAGAT+TGG 0.515271 1_2:-45799718 None:intergenic
TATAATCCCTTCAAAAGCTC+CGG 0.526079 1_2:-45799543 None:intergenic
GATCATCTAGAGATTTGGAA+TGG 0.526531 1_2:-45799334 None:intergenic
GTTCAAAGATGGTTTGACTC+AGG 0.527101 1_2:+45804188 Msa0072750:CDS
ATCATCTAGAGATTTGGAAT+GGG 0.527480 1_2:-45799333 None:intergenic
AGAACAAGAGCCTGATTATG+AGG 0.530550 1_2:+45804424 Msa0072750:CDS
TGGGTTAGGGTTACGGAGGA+AGG 0.531351 1_2:-45799138 None:intergenic
TAACCTGATATGTGGTGAAA+GGG 0.534784 1_2:+45805496 Msa0072750:CDS
TATGAGGTCACTTCCATACA+AGG 0.536146 1_2:+45804126 Msa0072750:CDS
GTGGAGATTTGAAGCTCCGG+TGG 0.536266 1_2:-45799158 None:intergenic
TAGCCTATTTAAAGAATCCA+TGG 0.537154 1_2:+45805981 Msa0072750:three_prime_UTR
ATTTGAAATAGGAGAGAATG+TGG 0.540066 1_2:+45804032 Msa0072750:CDS
TATTTGTCCTACTAGAGAGT+TGG 0.540350 1_2:+45799746 Msa0072750:CDS
TTAACCTGATATGTGGTGAA+AGG 0.547238 1_2:+45805495 Msa0072750:CDS
TGATTCTTAATCCTCCACAT+AGG 0.547639 1_2:+45799619 Msa0072750:CDS
CCGTAAGATGGGGAAGTACA+CGG 0.548975 1_2:+45800637 Msa0072750:CDS
AACACCTAAAATGAGACAAA+GGG 0.549687 1_2:-45806118 None:intergenic
TGTTGTGTGTTAGAACATTG+AGG 0.550901 1_2:+45800610 Msa0072750:intron
CGATCTTGTCTCTATCATCA+TGG 0.553290 1_2:-45804158 None:intergenic
GAACACCTAAAATGAGACAA+AGG 0.553551 1_2:-45806119 None:intergenic
TGTGGAGGATTAAGAATCAT+GGG 0.556922 1_2:-45799615 None:intergenic
GAGGGAAGAGGTTTCGTCGG+CGG 0.558959 1_2:-45799273 None:intergenic
GTGCAGTTCCTATGGACAGA+AGG 0.559745 1_2:+45800675 Msa0072750:CDS
CCATCACCAAAACCTAAACC+AGG 0.561226 1_2:-45805872 None:intergenic
ATTGAATCCCTTCTGTCCAT+AGG 0.561511 1_2:-45800683 None:intergenic
GGACAAATACATAGAGCTTG+AGG 0.569078 1_2:-45799732 None:intergenic
TGGTTAAATCATTGACGTTG+AGG 0.570927 1_2:-45799292 None:intergenic
AGTGGAGGAGAGGTGGTGGA+AGG 0.578866 1_2:-45799191 None:intergenic
GAGGTGTATTTGCACAGGGT+TGG 0.581567 1_2:+45804443 Msa0072750:CDS
CCTGTTGCTGATCAAAGCCA+CGG 0.583710 1_2:-45804236 None:intergenic
TTTGGATGGCAGTGGAGGAG+AGG 0.584058 1_2:-45799201 None:intergenic
TTTGAAATAGGAGAGAATGT+GGG 0.584556 1_2:+45804033 Msa0072750:CDS
TAGGGTTACGGAGGAAGGAG+AGG 0.586912 1_2:-45799133 None:intergenic
AAGGGCGCCTATTATGGCGC+AGG 0.587444 1_2:+45800718 Msa0072750:CDS
TGCAGTTCCTATGGACAGAA+GGG 0.587722 1_2:+45800676 Msa0072750:CDS
ATGGTGGAGATTTGAAGCTC+CGG 0.587929 1_2:-45799161 None:intergenic
TCGACCGATGTTCTTGCCCG+TGG 0.593684 1_2:+45804219 Msa0072750:CDS
GCTGGGCGATTTGGGCGCAA+GGG 0.595158 1_2:+45804470 Msa0072750:CDS
TTGAAATAGGAGAGAATGTG+GGG 0.596292 1_2:+45804034 Msa0072750:CDS
AGGAGTGTTCGCGACTTGGG+GGG 0.597166 1_2:-45799073 None:intergenic
GTTGAGGGAAGAGGTTTCGT+CGG 0.598306 1_2:-45799276 None:intergenic
CTGTAATACTGTTACTGTTG+AGG 0.601586 1_2:-45799093 None:intergenic
CCTCCGTAACCCTAACCCAC+CGG 0.604350 1_2:+45799142 Msa0072750:five_prime_UTR
GTGAAGTAGTCATGTCATGT+GGG 0.614634 1_2:+45806227 Msa0072750:three_prime_UTR
GAGGAGTGTTCGCGACTTGG+GGG 0.618165 1_2:-45799074 None:intergenic
CTGTTGCTGATCAAAGCCAC+GGG 0.620873 1_2:-45804235 None:intergenic
ATGACGAACCGCTGTAATGT+TGG 0.631036 1_2:-45799366 None:intergenic
CTGTATGAGATTGGTTTATG+CGG 0.631336 1_2:+45806019 Msa0072750:three_prime_UTR
TACTCAGCAGAGTACTTCAG+TGG 0.636769 1_2:-45804389 None:intergenic
GGTGAAGTAGTCATGTCATG+TGG 0.644026 1_2:+45806226 Msa0072750:three_prime_UTR
AAAGCCACGGGCAAGAACAT+CGG 0.646797 1_2:-45804223 None:intergenic
TAGCTCTTCAAACGTCGTGG+CGG 0.647649 1_2:-45799511 None:intergenic
GCTGTATTTAACCTGATATG+TGG 0.649135 1_2:+45805488 Msa0072750:CDS
TTATGAGGTGTATTTGCACA+GGG 0.652424 1_2:+45804439 Msa0072750:CDS
GGCGGATCAAATGCTTGCTG+AGG 0.654171 1_2:+45800829 Msa0072750:CDS
TGAGCAATCAAATCCCTATG+TGG 0.657178 1_2:-45799633 None:intergenic
TTGAGGTTCTCCGTAAGATG+GGG 0.657518 1_2:+45800627 Msa0072750:CDS
GCAATCAAATCCCTATGTGG+AGG 0.659205 1_2:-45799630 None:intergenic
GCATAAACCAATCTCATACA+GGG 0.661866 1_2:-45806017 None:intergenic
TGGAGATTTGAAGCTCCGGT+GGG 0.662425 1_2:-45799157 None:intergenic
TGAAGAGCTATCACTCTCGC+CGG 0.664024 1_2:+45799524 Msa0072750:CDS
GGTGGTGGAAGGTTCTGACA+TGG 0.670699 1_2:-45799180 None:intergenic
TGATAGCTCTTCAAACGTCG+TGG 0.672940 1_2:-45799514 None:intergenic
GGTGGAAGGTTCTGACATGG+TGG 0.673074 1_2:-45799177 None:intergenic
TACTCTGCTGAGTACACCCG+TGG 0.681522 1_2:+45804398 Msa0072750:CDS
GTAAGATGGGGAAGTACACG+GGG 0.699517 1_2:+45800639 Msa0072750:CDS
AGGGATTAAATAGAACACCA+TGG 0.708543 1_2:-45805998 None:intergenic
CATCACCAAAACCTAAACCA+GGG 0.711077 1_2:-45805871 None:intergenic
AAGTTGAAGGATCTTGCTAG+CGG 0.711654 1_2:+45805773 Msa0072750:three_prime_UTR
CCGGTGGGTTAGGGTTACGG+AGG 0.718773 1_2:-45799142 None:intergenic
CGACGACACCAACATTACAG+CGG 0.774689 1_2:+45799358 Msa0072750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTAAAAAAATAGATTT+AGG + chr1_2:45800293-45800312 Msa0072750:intron 10.0%
!! TTTGTAAAAAAATAGATTTA+GGG + chr1_2:45800294-45800313 Msa0072750:intron 10.0%
!!! CAAAACAAAAATAATTTTTT+TGG - chr1_2:45802444-45802463 None:intergenic 10.0%
!!! CAAAAAAATTATTTTTGTTT+TGG + chr1_2:45802442-45802461 Msa0072750:intron 10.0%
!!! AAAGATTATATATTTGAAAT+AGG + chr1_2:45804021-45804040 Msa0072750:CDS 10.0%
!! AGCTATTTATATAATAGATT+AGG + chr1_2:45799830-45799849 Msa0072750:intron 15.0%
!! GCTATTTATATAATAGATTA+GGG + chr1_2:45799831-45799850 Msa0072750:intron 15.0%
!! CTATTTATATAATAGATTAG+GGG + chr1_2:45799832-45799851 Msa0072750:intron 15.0%
!! TATTTATATAATAGATTAGG+GGG + chr1_2:45799833-45799852 Msa0072750:intron 15.0%
!!! TCATTTTTTTGCTTTAAAAT+AGG + chr1_2:45799954-45799973 Msa0072750:intron 15.0%
!!! CATTTTTTTGCTTTAAAATA+GGG + chr1_2:45799955-45799974 Msa0072750:intron 15.0%
!! TACAAATAGAAATATTATGT+TGG + chr1_2:45800049-45800068 Msa0072750:intron 15.0%
!!! TCTATTTTTTTACAAAAACA+AGG - chr1_2:45800290-45800309 None:intergenic 15.0%
!! TATTCAAATATTCCTTTATT+TGG + chr1_2:45800510-45800529 Msa0072750:intron 15.0%
!! AATTAAATCAAACCAAATAA+AGG - chr1_2:45800525-45800544 None:intergenic 15.0%
!!! TTGATTTAATTTGATTATTC+TGG + chr1_2:45800534-45800553 Msa0072750:intron 15.0%
!! TTAATTAATGAAAGATAGAA+TGG - chr1_2:45800895-45800914 None:intergenic 15.0%
!!! TTAATATATATAAAAGCACT+TGG - chr1_2:45801399-45801418 None:intergenic 15.0%
!!! TTTTTCACAAATTATAGAAA+GGG - chr1_2:45802121-45802140 None:intergenic 15.0%
!!! ATTTTTCACAAATTATAGAA+AGG - chr1_2:45802122-45802141 None:intergenic 15.0%
!! TAAATTGTAGTAATGAATAT+TGG - chr1_2:45802270-45802289 None:intergenic 15.0%
!! ATGCAGAATTATTATTATTT+AGG + chr1_2:45802917-45802936 Msa0072750:intron 15.0%
!!! ATTATTATTATTTAGGACTT+AGG + chr1_2:45802924-45802943 Msa0072750:intron 15.0%
!! CAAAAAATATGAAAAGAAAA+TGG - chr1_2:45803531-45803550 None:intergenic 15.0%
!! CTCTTACAATTATAATATAT+GGG - chr1_2:45804674-45804693 None:intergenic 15.0%
!! TTTAGAAAATGCTAAAATAT+AGG - chr1_2:45805362-45805381 None:intergenic 15.0%
!!! AAAACTACTTGTTTTAATCT+TGG + chr1_2:45799675-45799694 Msa0072750:CDS 20.0%
!!! AAACTACTTGTTTTAATCTT+GGG + chr1_2:45799676-45799695 Msa0072750:CDS 20.0%
!!! CAAAAAAATGATTTTCGTTT+TGG - chr1_2:45799945-45799964 None:intergenic 20.0%
!! AGAAATATTATGTTGGAAAA+TGG + chr1_2:45800056-45800075 Msa0072750:intron 20.0%
!!! TAAACTTTTTGAAAGTCAAA+AGG + chr1_2:45800094-45800113 Msa0072750:intron 20.0%
!! CAAAATTAGTATGTTTGTAT+TGG - chr1_2:45800129-45800148 None:intergenic 20.0%
!!! CAATACAAACATACTAATTT+TGG + chr1_2:45800127-45800146 Msa0072750:intron 20.0%
!!! ATTTTTTTACAAAAACAAGG+AGG - chr1_2:45800287-45800306 None:intergenic 20.0%
!! AAATAAAAACCTAAACAAAG+AGG + chr1_2:45800363-45800382 Msa0072750:intron 20.0%
!!! AGACATATTGTTTTCATATA+TGG + chr1_2:45800396-45800415 Msa0072750:intron 20.0%
!! TTGATTACTTATAAGAAACT+TGG + chr1_2:45800773-45800792 Msa0072750:CDS 20.0%
!!! TAAACTTTTTCATGCTAAAT+AGG + chr1_2:45800852-45800871 Msa0072750:intron 20.0%
!! CAAACATTAATGAATTGAAA+AGG - chr1_2:45801123-45801142 None:intergenic 20.0%
!!! TTTGAAGTTTTTGATTAACT+TGG - chr1_2:45801516-45801535 None:intergenic 20.0%
!! AAACTTCAAAGTAAATATAC+AGG + chr1_2:45801526-45801545 Msa0072750:intron 20.0%
!! AGATTTAGAAATTAAAGAGT+TGG - chr1_2:45802011-45802030 None:intergenic 20.0%
!! CAAAAACAAAATATGAGATT+AGG + chr1_2:45802304-45802323 Msa0072750:intron 20.0%
!!! AAATTATTTTTGTTTTGGCA+AGG + chr1_2:45802447-45802466 Msa0072750:intron 20.0%
!!! TTGCCATTTCAAAAAAAAAA+AGG + chr1_2:45803390-45803409 Msa0072750:intron 20.0%
!! AAAAAAAAAAAGGTGGTAAT+AGG + chr1_2:45803400-45803419 Msa0072750:intron 20.0%
!!! TTCTTTTTTTATCAGTTTAC+CGG + chr1_2:45803452-45803471 Msa0072750:intron 20.0%
!!! TTCCTAATTGTTATCTTTTA+AGG + chr1_2:45803497-45803516 Msa0072750:intron 20.0%
!!! TTCACTAAGAATTTTTTGAT+TGG + chr1_2:45803812-45803831 Msa0072750:intron 20.0%
!! GCATGAATAAAAAAAAAGAA+AGG - chr1_2:45804320-45804339 None:intergenic 20.0%
!! AATGTGAGATATGTAATATT+TGG - chr1_2:45804629-45804648 None:intergenic 20.0%
!! GCTCTTACAATTATAATATA+TGG - chr1_2:45804675-45804694 None:intergenic 20.0%
!! AGATAGATTAGAGAAATAAT+AGG - chr1_2:45804790-45804809 None:intergenic 20.0%
!! TCTTGTAATTATTCTCATTT+AGG + chr1_2:45804995-45805014 Msa0072750:intron 20.0%
!! AATATTTAAAGATTCCACAT+TGG + chr1_2:45805063-45805082 Msa0072750:intron 20.0%
!! TACTCTATCATTATAAGATT+TGG + chr1_2:45805104-45805123 Msa0072750:intron 20.0%
!! AAACAAATGTAAGAAAAACT+TGG - chr1_2:45805451-45805470 None:intergenic 20.0%
!! TTTGTTTCATTTGATTGAAT+AGG + chr1_2:45805464-45805483 Msa0072750:intron 20.0%
!! TTGTTTCATTTGATTGAATA+GGG + chr1_2:45805465-45805484 Msa0072750:intron 20.0%
!!! TCAAAGATTGAAAAACATTT+TGG + chr1_2:45805533-45805552 Msa0072750:CDS 20.0%
!!! CTTTGATGAATTATTTTACA+TGG + chr1_2:45805841-45805860 Msa0072750:three_prime_UTR 20.0%
!! GGTTGAAATACAATAAATAA+GGG + chr1_2:45806248-45806267 Msa0072750:three_prime_UTR 20.0%
! AAGCACTTTCAAATCTTAAA+GGG - chr1_2:45799031-45799050 None:intergenic 25.0%
!! AAAGCACTTTCAAATCTTAA+AGG - chr1_2:45799032-45799051 None:intergenic 25.0%
!!! CAGTTTCAATTTTGAAATTC+TGG - chr1_2:45799430-45799449 None:intergenic 25.0%
! ATTGAAACTGAATTTCACTT+AGG + chr1_2:45799440-45799459 Msa0072750:intron 25.0%
! TTGAAACTGAATTTCACTTA+GGG + chr1_2:45799441-45799460 Msa0072750:intron 25.0%
!!! TGTTTCAGCTTTGAAAAAAA+TGG + chr1_2:45799986-45800005 Msa0072750:intron 25.0%
! TCAATTAATAATTCCGATCA+GGG - chr1_2:45800939-45800958 None:intergenic 25.0%
! TTCAATTAATAATTCCGATC+AGG - chr1_2:45800940-45800959 None:intergenic 25.0%
!!! ATAAGAGTATTAGAACCAAA+TGG - chr1_2:45801191-45801210 None:intergenic 25.0%
!!! ATTTGGTTCTAATACTCTTA+TGG + chr1_2:45801190-45801209 Msa0072750:intron 25.0%
! GCTTAAAACTTATTTGTGAT+TGG + chr1_2:45801299-45801318 Msa0072750:intron 25.0%
!! ATTTGTGATTGGTTATTTGT+TGG + chr1_2:45801310-45801329 Msa0072750:intron 25.0%
!! TTTGTGATTGGTTATTTGTT+GGG + chr1_2:45801311-45801330 Msa0072750:intron 25.0%
!!! TTTTATATGTAGTTCTAGCT+AGG + chr1_2:45801482-45801501 Msa0072750:intron 25.0%
!! ACATACTAGGATATAGTTTT+TGG + chr1_2:45801549-45801568 Msa0072750:intron 25.0%
!!! TCCTTTTCTTTATTTTTAGC+AGG + chr1_2:45801617-45801636 Msa0072750:intron 25.0%
! TCCTGCTAAAAATAAAGAAA+AGG - chr1_2:45801621-45801640 None:intergenic 25.0%
!!! TCTTTATTTTTAGCAGGATT+TGG + chr1_2:45801623-45801642 Msa0072750:intron 25.0%
! TACAGTTATTAAGCAAATGA+AGG - chr1_2:45801666-45801685 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr1_2:45801979-45801998 None:intergenic 25.0%
! TTCTCGTATAATAAGATGAA+TGG - chr1_2:45802170-45802189 None:intergenic 25.0%
! ACTACAATTTACATTCAAGA+AGG + chr1_2:45802279-45802298 Msa0072750:intron 25.0%
! ATATAGAGATAGGATATTAG+TGG - chr1_2:45802419-45802438 None:intergenic 25.0%
!!! TTTTTTGGACATATAGAGAT+AGG - chr1_2:45802429-45802448 None:intergenic 25.0%
! GCAAGAAACTAAACAAATAT+TGG + chr1_2:45802511-45802530 Msa0072750:intron 25.0%
!! ATTATTATTTAGGACTTAGG+AGG + chr1_2:45802927-45802946 Msa0072750:intron 25.0%
!! GTCTTTTAGCATGTATAATT+CGG + chr1_2:45803229-45803248 Msa0072750:intron 25.0%
!! TTTAGGATTTGGAGATTTAT+TGG + chr1_2:45803258-45803277 Msa0072750:intron 25.0%
! TTAGGATTTGGAGATTTATT+GGG + chr1_2:45803259-45803278 Msa0072750:intron 25.0%
!!! CCACCTTTTTTTTTTTGAAA+TGG - chr1_2:45803396-45803415 None:intergenic 25.0%
! CCATTTCAAAAAAAAAAAGG+TGG + chr1_2:45803393-45803412 Msa0072750:intron 25.0%
! CTCCTTAAAAGATAACAATT+AGG - chr1_2:45803502-45803521 None:intergenic 25.0%
! AATTAACCTAAACAATGCAA+TGG - chr1_2:45804349-45804368 None:intergenic 25.0%
!! TTGCATTGTTTAGGTTAATT+TGG + chr1_2:45804349-45804368 Msa0072750:intron 25.0%
! ATAACACCATCAAAAGATTT+GGG - chr1_2:45804708-45804727 None:intergenic 25.0%
! AATAACACCATCAAAAGATT+TGG - chr1_2:45804709-45804728 None:intergenic 25.0%
!! ATTTTACAACCAATGAAACA+TGG - chr1_2:45804757-45804776 None:intergenic 25.0%
!! TTCATTGGTTGTAAAATAGA+TGG + chr1_2:45804760-45804779 Msa0072750:intron 25.0%
!! TTTCAAGCTTTTTGTATTTG+TGG + chr1_2:45804817-45804836 Msa0072750:intron 25.0%
! CTAGACAAAGTGTATAAATA+TGG + chr1_2:45804871-45804890 Msa0072750:intron 25.0%
!! CTTATAATGATAGAGTACTT+TGG - chr1_2:45805101-45805120 None:intergenic 25.0%
! GAGTAAAATTTAGACATCAA+TGG - chr1_2:45805212-45805231 None:intergenic 25.0%
! TGTTTCATTTGATTGAATAG+GGG + chr1_2:45805466-45805485 Msa0072750:intron 25.0%
!!! ATGTTTTTCAATCTTTGACA+AGG - chr1_2:45805531-45805550 None:intergenic 25.0%
!! AATCATTTTGTTAATGTCAC+TGG + chr1_2:45805673-45805692 Msa0072750:intron 25.0%
!! TTTGAATCTCTAAAAGTTGA+AGG + chr1_2:45805760-45805779 Msa0072750:exon 25.0%
!! TTTGGCTTCAATGTTTATTA+TGG + chr1_2:45805899-45805918 Msa0072750:three_prime_UTR 25.0%
!! GTTTATGCGGATAAATTTTT+GGG + chr1_2:45806032-45806051 Msa0072750:three_prime_UTR 25.0%
! GGGTTGAAATACAATAAATA+AGG + chr1_2:45806247-45806266 Msa0072750:three_prime_UTR 25.0%
! ATCATCTAGAGATTTGGAAT+GGG - chr1_2:45799336-45799355 None:intergenic 30.0%
! GACGAGATTTGAAATTGAAA+GGG - chr1_2:45799408-45799427 None:intergenic 30.0%
CACTTAGGGTTTATGAATTT+CGG + chr1_2:45799455-45799474 Msa0072750:intron 30.0%
!! TTTGTTCTTTAAGCCTTGTT+TGG + chr1_2:45799790-45799809 Msa0072750:intron 30.0%
! TATTTAGAGCCTCTTTGTTT+AGG - chr1_2:45800375-45800394 None:intergenic 30.0%
AATAAGATGAAAACCACATG+TGG + chr1_2:45800420-45800439 Msa0072750:intron 30.0%
ATCAAATTCTTAATTGTGCC+AGG - chr1_2:45800758-45800777 None:intergenic 30.0%
AGAATTAGTTATACCCTGAT+CGG + chr1_2:45800923-45800942 Msa0072750:intron 30.0%
TAAACTTACTCAGTACCATT+TGG + chr1_2:45801173-45801192 Msa0072750:intron 30.0%
! TCTAATACTCTTATGGACTA+TGG + chr1_2:45801197-45801216 Msa0072750:intron 30.0%
!! GTTTTAAGCTGTTTCATAAG+TGG - chr1_2:45801288-45801307 None:intergenic 30.0%
GTAAATATACAGGACATACT+AGG + chr1_2:45801536-45801555 Msa0072750:intron 30.0%
!!! TAGGATATAGTTTTTGGTTC+AGG + chr1_2:45801555-45801574 Msa0072750:intron 30.0%
!!! AGGATATAGTTTTTGGTTCA+GGG + chr1_2:45801556-45801575 Msa0072750:intron 30.0%
GCAAGAATTTCTTGTATGAA+AGG - chr1_2:45801819-45801838 None:intergenic 30.0%
TGCATAGATTTAATCTGAAC+AGG + chr1_2:45801836-45801855 Msa0072750:intron 30.0%
TAAAGAGTTGGACAGAAATA+TGG - chr1_2:45801999-45802018 None:intergenic 30.0%
CACGTCGTCATTTAAAAATT+AGG - chr1_2:45802036-45802055 None:intergenic 30.0%
CGTATAATAAGATGAATGGA+TGG - chr1_2:45802166-45802185 None:intergenic 30.0%
GACACAATAAATGAAAGAGA+AGG + chr1_2:45802345-45802364 Msa0072750:intron 30.0%
GCTATTAGAATTAATGTTGC+TGG - chr1_2:45802493-45802512 None:intergenic 30.0%
GTAAAAAAAAGTCTATCCCT+TGG + chr1_2:45802570-45802589 Msa0072750:intron 30.0%
!! TGTTCTCAAGTTGAAATTCA+CGG - chr1_2:45802664-45802683 None:intergenic 30.0%
CTACCATAAACTTGCATAAT+GGG - chr1_2:45802718-45802737 None:intergenic 30.0%
! GTATAATTCGGCATCATTTT+AGG + chr1_2:45803241-45803260 Msa0072750:intron 30.0%
TAGGATTTGGAGATTTATTG+GGG + chr1_2:45803260-45803279 Msa0072750:intron 30.0%
!! AGAAAAAACGGACTACAAAA+AGG - chr1_2:45803320-45803339 None:intergenic 30.0%
AAAAAAAAGGTGGTAATAGG+CGG + chr1_2:45803403-45803422 Msa0072750:intron 30.0%
TAGGAAAACAAGATCAAACA+AGG - chr1_2:45803483-45803502 None:intergenic 30.0%
AAATAGGAAAATACAACCAG+AGG - chr1_2:45803596-45803615 None:intergenic 30.0%
! CTGGTTGTATTTTCCTATTT+CGG + chr1_2:45803596-45803615 Msa0072750:intron 30.0%
! TGTCAAGAATTTTGCTACAA+GGG + chr1_2:45803882-45803901 Msa0072750:CDS 30.0%
! TGAACTTTTTGTGAAGAAAG+AGG + chr1_2:45803927-45803946 Msa0072750:CDS 30.0%
! ATTTGAAATAGGAGAGAATG+TGG + chr1_2:45804032-45804051 Msa0072750:CDS 30.0%
! TTTGAAATAGGAGAGAATGT+GGG + chr1_2:45804033-45804052 Msa0072750:CDS 30.0%
TATAATATATGGGAAGAGCA+TGG - chr1_2:45804664-45804683 None:intergenic 30.0%
TAACACCATCAAAAGATTTG+GGG - chr1_2:45804707-45804726 None:intergenic 30.0%
TGTATAAATATGGTTGTGTC+TGG + chr1_2:45804881-45804900 Msa0072750:intron 30.0%
! ATTTTATACTATCCCGTTCT+TGG + chr1_2:45805031-45805050 Msa0072750:intron 30.0%
! TTTTATACTATCCCGTTCTT+GGG + chr1_2:45805032-45805051 Msa0072750:intron 30.0%
TATTGATAGAAACCCAAGAA+CGG - chr1_2:45805047-45805066 None:intergenic 30.0%
TTCAACTAGATATATGGCTA+GGG + chr1_2:45805270-45805289 Msa0072750:intron 30.0%
!!! GGGATTTTTTATAAAGGCTT+GGG + chr1_2:45805292-45805311 Msa0072750:intron 30.0%
AATAACGTGCATAACTTACT+GGG - chr1_2:45805409-45805428 None:intergenic 30.0%
AAATAACGTGCATAACTTAC+TGG - chr1_2:45805410-45805429 None:intergenic 30.0%
! TTTTGGCACCTATATAAAAG+AGG + chr1_2:45805550-45805569 Msa0072750:CDS 30.0%
! TTAGCGTACCTCTTTTATAT+AGG - chr1_2:45805561-45805580 None:intergenic 30.0%
!! ACGCTAATTGATAATGTACT+TGG + chr1_2:45805574-45805593 Msa0072750:intron 30.0%
! ATTTTCTGCATTATGCTGAA+TGG - chr1_2:45805617-45805636 None:intergenic 30.0%
TTCAGCATAATGCAGAAAAT+TGG + chr1_2:45805617-45805636 Msa0072750:intron 30.0%
TGCTGTAATCAAAGAAATTC+AGG - chr1_2:45805808-45805827 None:intergenic 30.0%
TAGCCTATTTAAAGAATCCA+TGG + chr1_2:45805981-45806000 Msa0072750:three_prime_UTR 30.0%
ACACCATGGATTCTTTAAAT+AGG - chr1_2:45805987-45806006 None:intergenic 30.0%
ATTTAATCCCTGTATGAGAT+TGG + chr1_2:45806010-45806029 Msa0072750:three_prime_UTR 30.0%
! GGTTTATGCGGATAAATTTT+TGG + chr1_2:45806031-45806050 Msa0072750:three_prime_UTR 30.0%
AACACCTAAAATGAGACAAA+GGG - chr1_2:45806121-45806140 None:intergenic 30.0%
CTGTAATACTGTTACTGTTG+AGG - chr1_2:45799096-45799115 None:intergenic 35.0%
GGTTAAATCATTGACGTTGA+GGG - chr1_2:45799294-45799313 None:intergenic 35.0%
TGGTTAAATCATTGACGTTG+AGG - chr1_2:45799295-45799314 None:intergenic 35.0%
!! GGATTTGTTTTCTTCATCGA+TGG - chr1_2:45799315-45799334 None:intergenic 35.0%
GATCATCTAGAGATTTGGAA+TGG - chr1_2:45799337-45799356 None:intergenic 35.0%
! GGACGAGATTTGAAATTGAA+AGG - chr1_2:45799409-45799428 None:intergenic 35.0%
TATAATCCCTTCAAAAGCTC+CGG - chr1_2:45799546-45799565 None:intergenic 35.0%
!! GCTTTTGAAGGGATTATATG+TGG + chr1_2:45799548-45799567 Msa0072750:CDS 35.0%
!! CTCTTAGCTTGAATTTTGCT+AGG - chr1_2:45799591-45799610 None:intergenic 35.0%
TGTGGAGGATTAAGAATCAT+GGG - chr1_2:45799618-45799637 None:intergenic 35.0%
ATGTGGAGGATTAAGAATCA+TGG - chr1_2:45799619-45799638 None:intergenic 35.0%
TGATTCTTAATCCTCCACAT+AGG + chr1_2:45799619-45799638 Msa0072750:CDS 35.0%
GATTCTTAATCCTCCACATA+GGG + chr1_2:45799620-45799639 Msa0072750:CDS 35.0%
TTGATTGCTCAAGCACATAA+TGG + chr1_2:45799645-45799664 Msa0072750:CDS 35.0%
TTAATCTTGGGATGCTTAGT+AGG + chr1_2:45799688-45799707 Msa0072750:CDS 35.0%
TAATCTTGGGATGCTTAGTA+GGG + chr1_2:45799689-45799708 Msa0072750:CDS 35.0%
TATTTGTCCTACTAGAGAGT+TGG + chr1_2:45799746-45799765 Msa0072750:CDS 35.0%
CATTTCACTGTATCCAAACA+AGG - chr1_2:45799806-45799825 None:intergenic 35.0%
TAAATGCTAAAGAATGCCCT+TGG + chr1_2:45800009-45800028 Msa0072750:intron 35.0%
AAATGCTAAAGAATGCCCTT+GGG + chr1_2:45800010-45800029 Msa0072750:intron 35.0%
GTTTATGATATGTCCACATG+TGG - chr1_2:45800436-45800455 None:intergenic 35.0%
! AAACTGTTTGAAAGAGCGTA+TGG - chr1_2:45800464-45800483 None:intergenic 35.0%
! ATAGCTTGTGTTGAACAATG+TGG + chr1_2:45800564-45800583 Msa0072750:intron 35.0%
CAACACAACAAATAACGATC+AGG - chr1_2:45800590-45800609 None:intergenic 35.0%
TGTTGTGTGTTAGAACATTG+AGG + chr1_2:45800610-45800629 Msa0072750:intron 35.0%
ATTCAATTCCGCCATCAAAA+AGG + chr1_2:45800699-45800718 Msa0072750:CDS 35.0%
TTCAATTCCGCCATCAAAAA+GGG + chr1_2:45800700-45800719 Msa0072750:CDS 35.0%
!! GAAGATTCTCGTTTTTGATG+AGG + chr1_2:45800808-45800827 Msa0072750:CDS 35.0%
TGTTGTTGCAACTATTTGCA+AGG - chr1_2:45801069-45801088 None:intergenic 35.0%
! TACTCTTATGGACTATGGAA+AGG + chr1_2:45801202-45801221 Msa0072750:intron 35.0%
! AGGGCGTTTAATCTTCATAT+AGG + chr1_2:45801258-45801277 Msa0072750:intron 35.0%
! TTTCATGCCATTTCTGCAAA+GGG - chr1_2:45801364-45801383 None:intergenic 35.0%
!! TTTTCATGCCATTTCTGCAA+AGG - chr1_2:45801365-45801384 None:intergenic 35.0%
!! TATAAAAGCACTTGGTCTTC+AGG - chr1_2:45801391-45801410 None:intergenic 35.0%
!! TTTGGTTCAGGGAATTGTTT+TGG + chr1_2:45801567-45801586 Msa0072750:intron 35.0%
AGTTTATGTTTGCCATCCAT+TGG + chr1_2:45802058-45802077 Msa0072750:intron 35.0%
GTTTATGTTTGCCATCCATT+GGG + chr1_2:45802059-45802078 Msa0072750:intron 35.0%
! GATAGAATAGAGCTCGATTT+TGG - chr1_2:45802094-45802113 None:intergenic 35.0%
GAATGCGCAAAACATCATTT+GGG - chr1_2:45802232-45802251 None:intergenic 35.0%
!! ATATTGGCCATTTTATGTGC+AGG - chr1_2:45802254-45802273 None:intergenic 35.0%
AGAGAAGGATACATGAAAGA+AGG + chr1_2:45802360-45802379 Msa0072750:intron 35.0%
GAGAAGGATACATGAAAGAA+GGG + chr1_2:45802361-45802380 Msa0072750:intron 35.0%
!!! AAGGAAACCATTGATTTTGG+TGG + chr1_2:45802466-45802485 Msa0072750:intron 35.0%
!!! AGGAAACCATTGATTTTGGT+GGG + chr1_2:45802467-45802486 Msa0072750:intron 35.0%
TGCCAGATCATGAAAATACA+TGG + chr1_2:45802608-45802627 Msa0072750:intron 35.0%
GCCAGATCATGAAAATACAT+GGG + chr1_2:45802609-45802628 Msa0072750:intron 35.0%
CCAGATCATGAAAATACATG+GGG + chr1_2:45802610-45802629 Msa0072750:intron 35.0%
CAGATCATGAAAATACATGG+GGG + chr1_2:45802611-45802630 Msa0072750:intron 35.0%
AGATCATGAAAATACATGGG+GGG + chr1_2:45802612-45802631 Msa0072750:intron 35.0%
ACTTGAGAACAAGATGAAAC+TGG + chr1_2:45802673-45802692 Msa0072750:intron 35.0%
AGAACAAGATGAAACTGGTT+GGG + chr1_2:45802678-45802697 Msa0072750:intron 35.0%
CCTACCATAAACTTGCATAA+TGG - chr1_2:45802719-45802738 None:intergenic 35.0%
CCATTATGCAAGTTTATGGT+AGG + chr1_2:45802716-45802735 Msa0072750:intron 35.0%
TATGCAAGTTTATGGTAGGA+AGG + chr1_2:45802720-45802739 Msa0072750:intron 35.0%
ATGCAAGTTTATGGTAGGAA+GGG + chr1_2:45802721-45802740 Msa0072750:intron 35.0%
TGAAGGTCTTTATCCTACTA+AGG - chr1_2:45802775-45802794 None:intergenic 35.0%
ACGAGATATGGAATAATAGC+AGG + chr1_2:45802841-45802860 Msa0072750:intron 35.0%
CTCTATTGCTAATAACCACA+CGG - chr1_2:45803029-45803048 None:intergenic 35.0%
ACAAAACCATAAGTGCACAA+AGG - chr1_2:45803058-45803077 None:intergenic 35.0%
!!! TTCGGCATCATTTTAGGATT+TGG + chr1_2:45803247-45803266 Msa0072750:intron 35.0%
TTTGGAGATTTATTGGGGTT+TGG + chr1_2:45803265-45803284 Msa0072750:intron 35.0%
!! GATTTATTGGGGTTTGGTTT+TGG + chr1_2:45803271-45803290 Msa0072750:intron 35.0%
TCGCGAAAACAGAGAAAAAA+CGG - chr1_2:45803332-45803351 None:intergenic 35.0%
ATTGAAGACGAGATAATGCA+AGG - chr1_2:45803365-45803384 None:intergenic 35.0%
AAGATCAAACAAGGTAATGC+CGG - chr1_2:45803474-45803493 None:intergenic 35.0%
GTAACAGAAAATTGATCCTC+TGG + chr1_2:45803577-45803596 Msa0072750:intron 35.0%
! CTGTCAAGAATTTTGCTACA+AGG + chr1_2:45803881-45803900 Msa0072750:CDS 35.0%
! AATTTTGCTACAAGGGTTGT+TGG + chr1_2:45803889-45803908 Msa0072750:CDS 35.0%
! ATTTTGCTACAAGGGTTGTT+GGG + chr1_2:45803890-45803909 Msa0072750:CDS 35.0%
TTGAAATAGGAGAGAATGTG+GGG + chr1_2:45804034-45804053 Msa0072750:CDS 35.0%
!! CACAAAGCTCTTGTTGATTT+AGG + chr1_2:45804102-45804121 Msa0072750:CDS 35.0%
!! TCTTGTTGATTTAGGCTATG+AGG + chr1_2:45804110-45804129 Msa0072750:CDS 35.0%
ATCGTCAAAGAGTTCAAAGA+TGG + chr1_2:45804177-45804196 Msa0072750:CDS 35.0%
ATCCTTCCATTGCATTGTTT+AGG + chr1_2:45804340-45804359 Msa0072750:intron 35.0%
AACCTAAACAATGCAATGGA+AGG - chr1_2:45804345-45804364 None:intergenic 35.0%
TGCAAATACACCTCATAATC+AGG - chr1_2:45804437-45804456 None:intergenic 35.0%
ATTATGAGGTGTATTTGCAC+AGG + chr1_2:45804438-45804457 Msa0072750:CDS 35.0%
TTATGAGGTGTATTTGCACA+GGG + chr1_2:45804439-45804458 Msa0072750:CDS 35.0%
TTACAACCAATGAAACATGG+TGG - chr1_2:45804754-45804773 None:intergenic 35.0%
ATTTCTGTTAGGAACCTTGT+GGG + chr1_2:45804909-45804928 Msa0072750:intron 35.0%
!!! ACTTTTGAGATGCTTTGCTA+TGG + chr1_2:45804955-45804974 Msa0072750:intron 35.0%
!!! CTTTTGAGATGCTTTGCTAT+GGG + chr1_2:45804956-45804975 Msa0072750:intron 35.0%
!!! TTTTGAGATGCTTTGCTATG+GGG + chr1_2:45804957-45804976 Msa0072750:intron 35.0%
ATTGATAGAAACCCAAGAAC+GGG - chr1_2:45805046-45805065 None:intergenic 35.0%
GTTAGGCATAAATTCCAACA+TGG + chr1_2:45805153-45805172 Msa0072750:intron 35.0%
! GATAAGCTCTAATACCATGT+TGG - chr1_2:45805170-45805189 None:intergenic 35.0%
ACCCACTTCAACTAGATATA+TGG + chr1_2:45805264-45805283 Msa0072750:intron 35.0%
GCCATATATCTAGTTGAAGT+GGG - chr1_2:45805268-45805287 None:intergenic 35.0%
AGCCATATATCTAGTTGAAG+TGG - chr1_2:45805269-45805288 None:intergenic 35.0%
CTTCAACTAGATATATGGCT+AGG + chr1_2:45805269-45805288 Msa0072750:intron 35.0%
TCAACTAGATATATGGCTAG+GGG + chr1_2:45805271-45805290 Msa0072750:intron 35.0%
!!! GCTAGGGGGATTTTTTATAA+AGG + chr1_2:45805286-45805305 Msa0072750:intron 35.0%
!!! GGGGATTTTTTATAAAGGCT+TGG + chr1_2:45805291-45805310 Msa0072750:intron 35.0%
!! CTAGCCTTTGGTATTTTCTT+TGG + chr1_2:45805336-45805355 Msa0072750:intron 35.0%
TAGGCCAAAGAAAATACCAA+AGG - chr1_2:45805343-45805362 None:intergenic 35.0%
ATAACGTGCATAACTTACTG+GGG - chr1_2:45805408-45805427 None:intergenic 35.0%
!! ATGCACGTTATTTTCAGTAG+TGG + chr1_2:45805417-45805436 Msa0072750:intron 35.0%
GCTGTATTTAACCTGATATG+TGG + chr1_2:45805488-45805507 Msa0072750:CDS 35.0%
TTAACCTGATATGTGGTGAA+AGG + chr1_2:45805495-45805514 Msa0072750:CDS 35.0%
TAACCTGATATGTGGTGAAA+GGG + chr1_2:45805496-45805515 Msa0072750:CDS 35.0%
TTGTTAATGTCACTGGATGT+AGG + chr1_2:45805680-45805699 Msa0072750:intron 35.0%
AAAGTTGCTCTTAAAGAAGC+TGG + chr1_2:45805729-45805748 Msa0072750:CDS 35.0%
! TTTTACATGGATATACACCC+TGG + chr1_2:45805854-45805873 Msa0072750:three_prime_UTR 35.0%
TCAAATGTGCGTACAAACTT+TGG + chr1_2:45805956-45805975 Msa0072750:three_prime_UTR 35.0%
AGGGATTAAATAGAACACCA+TGG - chr1_2:45806001-45806020 None:intergenic 35.0%
GCATAAACCAATCTCATACA+GGG - chr1_2:45806020-45806039 None:intergenic 35.0%
!! CTGTATGAGATTGGTTTATG+CGG + chr1_2:45806019-45806038 Msa0072750:three_prime_UTR 35.0%
! TACTCCCTTTGTCTCATTTT+AGG + chr1_2:45806114-45806133 Msa0072750:three_prime_UTR 35.0%
GAACACCTAAAATGAGACAA+AGG - chr1_2:45806122-45806141 None:intergenic 35.0%
GTTTCATCAACAGTAGTAGT+TGG + chr1_2:45806205-45806224 Msa0072750:three_prime_UTR 35.0%
!! GGTTTGATTGGTTTCTTCGT+CGG - chr1_2:45799243-45799262 None:intergenic 40.0%
GAAATTGAAAGGGAGAAGAG+AGG - chr1_2:45799398-45799417 None:intergenic 40.0%
TGAGCAATCAAATCCCTATG+TGG - chr1_2:45799636-45799655 None:intergenic 40.0%
GGACAAATACATAGAGCTTG+AGG - chr1_2:45799735-45799754 None:intergenic 40.0%
TGAATAGCCAACTCTCTAGT+AGG - chr1_2:45799756-45799775 None:intergenic 40.0%
TACTAGAGAGTTGGCTATTC+AGG + chr1_2:45799755-45799774 Msa0072750:CDS 40.0%
AATGCTAAAGAATGCCCTTG+GGG + chr1_2:45800011-45800030 Msa0072750:intron 40.0%
ATTGAGGTTCTCCGTAAGAT+GGG + chr1_2:45800626-45800645 Msa0072750:CDS 40.0%
ATTGAATCCCTTCTGTCCAT+AGG - chr1_2:45800686-45800705 None:intergenic 40.0%
! ATAATAGGCGCCCTTTTTGA+TGG - chr1_2:45800713-45800732 None:intergenic 40.0%
!! ATCAAAAAGGGCGCCTATTA+TGG + chr1_2:45800712-45800731 Msa0072750:CDS 40.0%
ATAACAACCTGCGCCATAAT+AGG - chr1_2:45800728-45800747 None:intergenic 40.0%
ATTATGGCGCAGGTTGTTAT+TGG + chr1_2:45800728-45800747 Msa0072750:CDS 40.0%
!! GATTCTCGTTTTTGATGAGG+CGG + chr1_2:45800811-45800830 Msa0072750:CDS 40.0%
AGCTGATGTTGCATTGCTAA+AGG + chr1_2:45801238-45801257 Msa0072750:intron 40.0%
GCTGATGTTGCATTGCTAAA+GGG + chr1_2:45801239-45801258 Msa0072750:intron 40.0%
! GTGATTGGTTATTTGTTGGG+TGG + chr1_2:45801314-45801333 Msa0072750:intron 40.0%
TTGAATGCCCTTTGCAGAAA+TGG + chr1_2:45801354-45801373 Msa0072750:intron 40.0%
GAGATTCAATTCAAGCTGTC+AGG + chr1_2:45801747-45801766 Msa0072750:CDS 40.0%
TGAACAGGCTGTGTAGAATA+AGG + chr1_2:45801851-45801870 Msa0072750:intron 40.0%
! TTTTGGTCATGCTTTCCCAA+TGG - chr1_2:45802077-45802096 None:intergenic 40.0%
TAAGATGAATGGATGGCATG+CGG - chr1_2:45802159-45802178 None:intergenic 40.0%
GGAATGCGCAAAACATCATT+TGG - chr1_2:45802233-45802252 None:intergenic 40.0%
ACTGCAAGTCTGCAAGTTTA+GGG + chr1_2:45802389-45802408 Msa0072750:intron 40.0%
!!! GGCAAGGAAACCATTGATTT+TGG + chr1_2:45802463-45802482 Msa0072750:intron 40.0%
! CCCCATGTATTTTCATGATC+TGG - chr1_2:45802613-45802632 None:intergenic 40.0%
GAGAACAAGATGAAACTGGT+TGG + chr1_2:45802677-45802696 Msa0072750:intron 40.0%
GAACAAGATGAAACTGGTTG+GGG + chr1_2:45802679-45802698 Msa0072750:intron 40.0%
AACAAGATGAAACTGGTTGG+GGG + chr1_2:45802680-45802699 Msa0072750:intron 40.0%
AGGCCCATTATGCAAGTTTA+TGG + chr1_2:45802712-45802731 Msa0072750:intron 40.0%
TGGATGCAGGAAAAGGATAT+TGG + chr1_2:45802748-45802767 Msa0072750:intron 40.0%
GGATGCAGGAAAAGGATATT+GGG + chr1_2:45802749-45802768 Msa0072750:intron 40.0%
AAAGGATATTGGGCCTTAGT+AGG + chr1_2:45802759-45802778 Msa0072750:intron 40.0%
TTTCCTCTCATAGCACTTGA+AGG - chr1_2:45802792-45802811 None:intergenic 40.0%
GAAAAAACATGCTGCACAAG+AGG + chr1_2:45802808-45802827 Msa0072750:intron 40.0%
ATAATAGCAGGATAGACACG+TGG + chr1_2:45802853-45802872 Msa0072750:intron 40.0%
!!! GAGCATTTTAAGGTGGTAGT+AGG + chr1_2:45802972-45802991 Msa0072750:intron 40.0%
CAGAATCCTTTGTGCACTTA+TGG + chr1_2:45803049-45803068 Msa0072750:intron 40.0%
! GGCTCTTTATTGATTGCTGT+AGG + chr1_2:45803081-45803100 Msa0072750:intron 40.0%
ATTGATTGCTGTAGGAAGTG+CGG + chr1_2:45803089-45803108 Msa0072750:intron 40.0%
!! TTTGGAGTACCAGTATTGGT+GGG + chr1_2:45803151-45803170 Msa0072750:intron 40.0%
AATCCTAAACCCACCAATAC+TGG - chr1_2:45803163-45803182 None:intergenic 40.0%
! TAGGATTAGCAAGGCTAGTT+TGG + chr1_2:45803176-45803195 Msa0072750:intron 40.0%
! TTTGGATTCTCTGATGATGC+AGG + chr1_2:45803194-45803213 Msa0072750:intron 40.0%
! TTGGATTCTCTGATGATGCA+GGG + chr1_2:45803195-45803214 Msa0072750:intron 40.0%
!!! TTATTGGGGTTTGGTTTTGG+AGG + chr1_2:45803274-45803293 Msa0072750:intron 40.0%
!! AAAAAGGTGCCGCATATAGA+CGG - chr1_2:45803304-45803323 None:intergenic 40.0%
TCCTATTTCGGCTTATAGCT+TGG + chr1_2:45803608-45803627 Msa0072750:intron 40.0%
CCTATTTCGGCTTATAGCTT+GGG + chr1_2:45803609-45803628 Msa0072750:intron 40.0%
CTATTTCGGCTTATAGCTTG+GGG + chr1_2:45803610-45803629 Msa0072750:intron 40.0%
!!! TGATTGGCTTGTGTTTTTGC+AGG + chr1_2:45803828-45803847 Msa0072750:intron 40.0%
TACAAGGGTTGTTGGGAAAA+AGG + chr1_2:45803897-45803916 Msa0072750:CDS 40.0%
TATGAGGTCACTTCCATACA+AGG + chr1_2:45804126-45804145 Msa0072750:CDS 40.0%
CGATCTTGTCTCTATCATCA+TGG - chr1_2:45804161-45804180 None:intergenic 40.0%
GTTCAAAGATGGTTTGACTC+AGG + chr1_2:45804188-45804207 Msa0072750:CDS 40.0%
CATAATCAGGCTCTTGTTCT+TGG - chr1_2:45804424-45804443 None:intergenic 40.0%
AGAACAAGAGCCTGATTATG+AGG + chr1_2:45804424-45804443 Msa0072750:CDS 40.0%
! TCTGACCCCAAATCTTTTGA+TGG + chr1_2:45804699-45804718 Msa0072750:intron 40.0%
TGGCAACAACACTTTCTTTG+AGG - chr1_2:45804734-45804753 None:intergenic 40.0%
TTGTTGCCACCATGTTTCAT+TGG + chr1_2:45804745-45804764 Msa0072750:intron 40.0%
GTCTGGACATCATTTCTGTT+AGG + chr1_2:45804898-45804917 Msa0072750:intron 40.0%
CATTTCTGTTAGGAACCTTG+TGG + chr1_2:45804908-45804927 Msa0072750:intron 40.0%
GGTCATATCTCTTACCAATG+TGG - chr1_2:45805080-45805099 None:intergenic 40.0%
! TCCCTTGAGCTAGTTTAGTT+AGG + chr1_2:45805136-45805155 Msa0072750:intron 40.0%
GCCTAACTAAACTAGCTCAA+GGG - chr1_2:45805140-45805159 None:intergenic 40.0%
TGCCTAACTAAACTAGCTCA+AGG - chr1_2:45805141-45805160 None:intergenic 40.0%
CATCAATGGACAACTCTATC+AGG - chr1_2:45805198-45805217 None:intergenic 40.0%
CAACTAGATATATGGCTAGG+GGG + chr1_2:45805272-45805291 Msa0072750:intron 40.0%
! GAAAATACCAAAGGCTAGCT+CGG - chr1_2:45805334-45805353 None:intergenic 40.0%
TAACGTGCATAACTTACTGG+GGG - chr1_2:45805407-45805426 None:intergenic 40.0%
AAGTTGAAGGATCTTGCTAG+CGG + chr1_2:45805773-45805792 Msa0072750:three_prime_UTR 40.0%
ATGGATATACACCCTGGTTT+AGG + chr1_2:45805860-45805879 Msa0072750:three_prime_UTR 40.0%
!! ATACACCCTGGTTTAGGTTT+TGG + chr1_2:45805866-45805885 Msa0072750:three_prime_UTR 40.0%
CATCACCAAAACCTAAACCA+GGG - chr1_2:45805874-45805893 None:intergenic 40.0%
CGCATAAACCAATCTCATAC+AGG - chr1_2:45806021-45806040 None:intergenic 40.0%
GTGAAGTAGTCATGTCATGT+GGG + chr1_2:45806227-45806246 Msa0072750:three_prime_UTR 40.0%
! ATGGTGGAGATTTGAAGCTC+CGG - chr1_2:45799164-45799183 None:intergenic 45.0%
ATCATTGACGTTGAGGGAAG+AGG - chr1_2:45799288-45799307 None:intergenic 45.0%
GTCGGGATCATCTAGAGATT+TGG - chr1_2:45799342-45799361 None:intergenic 45.0%
ATGACGAACCGCTGTAATGT+TGG - chr1_2:45799369-45799388 None:intergenic 45.0%
GAAAGGGAGAAGAGAGGATA+AGG - chr1_2:45799392-45799411 None:intergenic 45.0%
! GGGTTTATGAATTTCGGTGC+AGG + chr1_2:45799461-45799480 Msa0072750:intron 45.0%
TGATAGCTCTTCAAACGTCG+TGG - chr1_2:45799517-45799536 None:intergenic 45.0%
GCAATCAAATCCCTATGTGG+AGG - chr1_2:45799633-45799652 None:intergenic 45.0%
GCTCAAGCACATAATGGTTC+TGG + chr1_2:45799651-45799670 Msa0072750:CDS 45.0%
CATTGAGGTTCTCCGTAAGA+TGG + chr1_2:45800625-45800644 Msa0072750:CDS 45.0%
TTGAGGTTCTCCGTAAGATG+GGG + chr1_2:45800627-45800646 Msa0072750:CDS 45.0%
CTCAGAATGTGCAGTTCCTA+TGG + chr1_2:45800667-45800686 Msa0072750:CDS 45.0%
TGCAGTTCCTATGGACAGAA+GGG + chr1_2:45800676-45800695 Msa0072750:CDS 45.0%
! CAGGTTGTTATTGGTACTCC+TGG + chr1_2:45800737-45800756 Msa0072750:CDS 45.0%
! TTATTTGTTGGGTGGACCAC+TGG + chr1_2:45801322-45801341 Msa0072750:intron 45.0%
! TATTTGTTGGGTGGACCACT+GGG + chr1_2:45801323-45801342 Msa0072750:intron 45.0%
CATTCAAGTCATTCTCCCAG+TGG - chr1_2:45801341-45801360 None:intergenic 45.0%
TTCCCTTTACCCATCACAAG+GGG - chr1_2:45801437-45801456 None:intergenic 45.0%
CTTCCCTTTACCCATCACAA+GGG - chr1_2:45801438-45801457 None:intergenic 45.0%
TCTTCCCTTTACCCATCACA+AGG - chr1_2:45801439-45801458 None:intergenic 45.0%
!! TTGTGATGGGTAAAGGGAAG+AGG + chr1_2:45801438-45801457 Msa0072750:intron 45.0%
! CTGTAAAACTGTGCTGTTGC+AGG + chr1_2:45801681-45801700 Msa0072750:intron 45.0%
! AAAACTGTGCTGTTGCAGGA+TGG + chr1_2:45801685-45801704 Msa0072750:intron 45.0%
AAGCACACTAAGCAAGAGAG+AGG - chr1_2:45801781-45801800 None:intergenic 45.0%
GCGCATTCCTGCACATAAAA+TGG + chr1_2:45802244-45802263 Msa0072750:intron 45.0%
GACTGCAAGTCTGCAAGTTT+AGG + chr1_2:45802388-45802407 Msa0072750:intron 45.0%
TTTCCACGTCATAGCAGAGT+TGG - chr1_2:45802537-45802556 None:intergenic 45.0%
AGCATGTGGGTTCAAACCAA+GGG - chr1_2:45802589-45802608 None:intergenic 45.0%
TTCATGATCTGGCAGCATGT+GGG - chr1_2:45802602-45802621 None:intergenic 45.0%
TTTCATGATCTGGCAGCATG+TGG - chr1_2:45802603-45802622 None:intergenic 45.0%
TCATGAAAATACATGGGGGG+AGG + chr1_2:45802615-45802634 Msa0072750:intron 45.0%
ACAAGATGAAACTGGTTGGG+GGG + chr1_2:45802681-45802700 Msa0072750:intron 45.0%
AAGTTTATGGTAGGAAGGGC+AGG + chr1_2:45802725-45802744 Msa0072750:intron 45.0%
AGACCTTCAAGTGCTATGAG+AGG + chr1_2:45802786-45802805 Msa0072750:intron 45.0%
!!! GTGCACTTATGGTTTTGTGC+TGG + chr1_2:45803060-45803079 Msa0072750:intron 45.0%
ACTCCAAACCAGAACAGACA+CGG - chr1_2:45803139-45803158 None:intergenic 45.0%
!! CTGGTTTGGAGTACCAGTAT+TGG + chr1_2:45803147-45803166 Msa0072750:intron 45.0%
! GTTTGGAGTACCAGTATTGG+TGG + chr1_2:45803150-45803169 Msa0072750:intron 45.0%
!! GTACCAGTATTGGTGGGTTT+AGG + chr1_2:45803157-45803176 Msa0072750:intron 45.0%
!! TGGTGGGTTTAGGATTAGCA+AGG + chr1_2:45803167-45803186 Msa0072750:intron 45.0%
! TGGATTCTCTGATGATGCAG+GGG + chr1_2:45803196-45803215 Msa0072750:intron 45.0%
AAAAGGTGGTAATAGGCGGT+TGG + chr1_2:45803407-45803426 Msa0072750:intron 45.0%
CCCAAGCTATAAGCCGAAAT+AGG - chr1_2:45803612-45803631 None:intergenic 45.0%
CTTATAGCTTGGGGCTAAAG+AGG + chr1_2:45803619-45803638 Msa0072750:intron 45.0%
AAAGAGGATTCGTCCTTGAC+TGG + chr1_2:45803635-45803654 Msa0072750:intron 45.0%
AAGTGCAATCCTTCCAGTCA+AGG - chr1_2:45803651-45803670 None:intergenic 45.0%
!! ATGGTCAAGAGCACCTTGTA+TGG - chr1_2:45804142-45804161 None:intergenic 45.0%
AAAGAGAAGACACGCAGAGA+TGG - chr1_2:45804274-45804293 None:intergenic 45.0%
! TACTCAGCAGAGTACTTCAG+TGG - chr1_2:45804392-45804411 None:intergenic 45.0%
! TGTATTTGCACAGGGTTGGT+AGG + chr1_2:45804447-45804466 Msa0072750:CDS 45.0%
!! GTATTTGCACAGGGTTGGTA+GGG + chr1_2:45804448-45804467 Msa0072750:CDS 45.0%
TGTTAGGAACCTTGTGGGTT+GGG + chr1_2:45804914-45804933 Msa0072750:intron 45.0%
ACTAGCTCAAGGGAAATGAC+TGG - chr1_2:45805130-45805149 None:intergenic 45.0%
ACTCTCCATATGTCCAACTC+AGG + chr1_2:45805228-45805247 Msa0072750:intron 45.0%
CTCTCCATATGTCCAACTCA+GGG + chr1_2:45805229-45805248 Msa0072750:intron 45.0%
TCTCCATATGTCCAACTCAG+GGG + chr1_2:45805230-45805249 Msa0072750:intron 45.0%
! AATCCCCTGAGTTGGACATA+TGG - chr1_2:45805236-45805255 None:intergenic 45.0%
CATCCCTTTCACCACATATC+AGG - chr1_2:45805502-45805521 None:intergenic 45.0%
CCATCACCAAAACCTAAACC+AGG - chr1_2:45805875-45805894 None:intergenic 45.0%
!! CCTGGTTTAGGTTTTGGTGA+TGG + chr1_2:45805872-45805891 Msa0072750:three_prime_UTR 45.0%
!!! GGTTTTGGTGATGGAGAGTT+TGG + chr1_2:45805881-45805900 Msa0072750:three_prime_UTR 45.0%
GGTGAAGTAGTCATGTCATG+TGG + chr1_2:45806226-45806245 Msa0072750:three_prime_UTR 45.0%
!!! ACAAAATATATATTTTTTAA+TGG - chr1_2:45800168-45800187 None:intergenic 5.0%
!!! TTTTATTTTAAATCATTTTT+TGG - chr1_2:45800351-45800370 None:intergenic 5.0%
!! TTGAGGAGTGTTCGCGACTT+GGG - chr1_2:45799079-45799098 None:intergenic 50.0%
!! TTTGAAGCTCCGGTGGGTTA+GGG - chr1_2:45799154-45799173 None:intergenic 50.0%
! ATTTGAAGCTCCGGTGGGTT+AGG - chr1_2:45799155-45799174 None:intergenic 50.0%
! TGGAGATTTGAAGCTCCGGT+GGG - chr1_2:45799160-45799179 None:intergenic 50.0%
TCCACTGCCATCCAAAAGCT+GGG + chr1_2:45799208-45799227 Msa0072750:CDS 50.0%
!! GGTTTCTTCGTCGGCTTGAT+CGG - chr1_2:45799234-45799253 None:intergenic 50.0%
GTTGAGGGAAGAGGTTTCGT+CGG - chr1_2:45799279-45799298 None:intergenic 50.0%
!! GCTGTAATGTTGGTGTCGTC+GGG - chr1_2:45799359-45799378 None:intergenic 50.0%
!! CGCTGTAATGTTGGTGTCGT+CGG - chr1_2:45799360-45799379 None:intergenic 50.0%
CGACGACACCAACATTACAG+CGG + chr1_2:45799358-45799377 Msa0072750:CDS 50.0%
! ATTTCGGTGCAGGTTACAGC+TGG + chr1_2:45799471-45799490 Msa0072750:intron 50.0%
TAGCTCTTCAAACGTCGTGG+CGG - chr1_2:45799514-45799533 None:intergenic 50.0%
TGAAGAGCTATCACTCTCGC+CGG + chr1_2:45799524-45799543 Msa0072750:CDS 50.0%
GCTTGAGGAGCTTGCAGATT+GGG - chr1_2:45799720-45799739 None:intergenic 50.0%
AGCTTGAGGAGCTTGCAGAT+TGG - chr1_2:45799721-45799740 None:intergenic 50.0%
AAAGAATGCCCTTGGGGCAT+TGG + chr1_2:45800017-45800036 Msa0072750:intron 50.0%
CCTCTTAACCAATGCCCCAA+GGG - chr1_2:45800028-45800047 None:intergenic 50.0%
TCCTCTTAACCAATGCCCCA+AGG - chr1_2:45800029-45800048 None:intergenic 50.0%
CCGTGTACTTCCCCATCTTA+CGG - chr1_2:45800640-45800659 None:intergenic 50.0%
! CCGTAAGATGGGGAAGTACA+CGG + chr1_2:45800637-45800656 Msa0072750:CDS 50.0%
! CGTAAGATGGGGAAGTACAC+GGG + chr1_2:45800638-45800657 Msa0072750:CDS 50.0%
! GTAAGATGGGGAAGTACACG+GGG + chr1_2:45800639-45800658 Msa0072750:CDS 50.0%
GTGCAGTTCCTATGGACAGA+AGG + chr1_2:45800675-45800694 Msa0072750:CDS 50.0%
! ATAGGCGCCCTTTTTGATGG+CGG - chr1_2:45800710-45800729 None:intergenic 50.0%
AGATGACTCTCCCCTTGTGA+TGG + chr1_2:45801424-45801443 Msa0072750:intron 50.0%
GATGACTCTCCCCTTGTGAT+GGG + chr1_2:45801425-45801444 Msa0072750:intron 50.0%
!! TCTCCCCTTGTGATGGGTAA+AGG + chr1_2:45801431-45801450 Msa0072750:intron 50.0%
!! CTCCCCTTGTGATGGGTAAA+GGG + chr1_2:45801432-45801451 Msa0072750:intron 50.0%
! GGAAAAGGCTTGGTTGAGTG+TGG - chr1_2:45801921-45801940 None:intergenic 50.0%
! CCAAGCCTTTTCCCACTAAG+CGG + chr1_2:45801928-45801947 Msa0072750:intron 50.0%
! CAAGCCTTTTCCCACTAAGC+GGG + chr1_2:45801929-45801948 Msa0072750:intron 50.0%
! AAGCCTTTTCCCACTAAGCG+GGG + chr1_2:45801930-45801949 Msa0072750:intron 50.0%
GGTCATGCTTTCCCAATGGA+TGG - chr1_2:45802073-45802092 None:intergenic 50.0%
TGCTGGCCCACCAAAATCAA+TGG - chr1_2:45802476-45802495 None:intergenic 50.0%
CAGCATGTGGGTTCAAACCA+AGG - chr1_2:45802590-45802609 None:intergenic 50.0%
CTGGTTGGGGGGATATTGAT+AGG + chr1_2:45802692-45802711 Msa0072750:intron 50.0%
TTTATGGTAGGAAGGGCAGG+TGG + chr1_2:45802728-45802747 Msa0072750:intron 50.0%
ACATGCTGCACAAGAGGAGT+TGG + chr1_2:45802814-45802833 Msa0072750:intron 50.0%
AGGATAGACACGTGGCAATG+AGG + chr1_2:45802861-45802880 Msa0072750:intron 50.0%
GGATAGACACGTGGCAATGA+GGG + chr1_2:45802862-45802881 Msa0072750:intron 50.0%
GGAGAGAGGATACGGAAATC+AGG + chr1_2:45802889-45802908 Msa0072750:intron 50.0%
GAGGATACGGAAATCAGGCA+AGG + chr1_2:45802894-45802913 Msa0072750:intron 50.0%
! CTTAGGAGGTGCATAACCGA+AGG + chr1_2:45802941-45802960 Msa0072750:intron 50.0%
AAATGCTCTGCACCCACCTT+CGG - chr1_2:45802960-45802979 None:intergenic 50.0%
!! GGTGGGTGCAGAGCATTTTA+AGG + chr1_2:45802962-45802981 Msa0072750:intron 50.0%
!! GGGTGCAGAGCATTTTAAGG+TGG + chr1_2:45802965-45802984 Msa0072750:intron 50.0%
TAGGTTCAGTGCTGCAGTGT+TGG + chr1_2:45802991-45803010 Msa0072750:intron 50.0%
CTCCAAACCAGAACAGACAC+GGG - chr1_2:45803138-45803157 None:intergenic 50.0%
ATGATGCAGGGGTAAGCATG+CGG + chr1_2:45803207-45803226 Msa0072750:intron 50.0%
!! GGAGGTGTTCCGTCTATATG+CGG + chr1_2:45803292-45803311 Msa0072750:intron 50.0%
AGGATTCGTCCTTGACTGGA+AGG + chr1_2:45803639-45803658 Msa0072750:intron 50.0%
AAAGCCACGGGCAAGAACAT+CGG - chr1_2:45804226-45804245 None:intergenic 50.0%
CTGTTGCTGATCAAAGCCAC+GGG - chr1_2:45804238-45804257 None:intergenic 50.0%
CCTGTTGCTGATCAAAGCCA+CGG - chr1_2:45804239-45804258 None:intergenic 50.0%
GAGGTGTATTTGCACAGGGT+TGG + chr1_2:45804443-45804462 Msa0072750:CDS 50.0%
CTGTTAGGAACCTTGTGGGT+TGG + chr1_2:45804913-45804932 Msa0072750:intron 50.0%
TCCAACTCAGGGGATTTGAC+TGG + chr1_2:45805240-45805259 Msa0072750:intron 50.0%
! CAAAGGCTAGCTCGGATCAA+GGG - chr1_2:45805326-45805345 None:intergenic 50.0%
AAGGATCTTGCTAGCGGTGT+TGG + chr1_2:45805779-45805798 Msa0072750:three_prime_UTR 50.0%
!! TGAGGAGTGTTCGCGACTTG+GGG - chr1_2:45799078-45799097 None:intergenic 55.0%
!! GTTGAGGAGTGTTCGCGACT+TGG - chr1_2:45799080-45799099 None:intergenic 55.0%
TAGGGTTACGGAGGAAGGAG+AGG - chr1_2:45799136-45799155 None:intergenic 55.0%
! TGGGTTAGGGTTACGGAGGA+AGG - chr1_2:45799141-45799160 None:intergenic 55.0%
! GTGGAGATTTGAAGCTCCGG+TGG - chr1_2:45799161-45799180 None:intergenic 55.0%
! GGTGGAAGGTTCTGACATGG+TGG - chr1_2:45799180-45799199 None:intergenic 55.0%
!! GGTGGTGGAAGGTTCTGACA+TGG - chr1_2:45799183-45799202 None:intergenic 55.0%
TTTGGATGGCAGTGGAGGAG+AGG - chr1_2:45799204-45799223 None:intergenic 55.0%
! CAGCTTTTGGATGGCAGTGG+AGG - chr1_2:45799209-45799228 None:intergenic 55.0%
CTCCACTGCCATCCAAAAGC+TGG + chr1_2:45799207-45799226 Msa0072750:CDS 55.0%
! TGATCGGCCCAGCTTTTGGA+TGG - chr1_2:45799218-45799237 None:intergenic 55.0%
!! AACGTCGTGGCGGATGTGTA+AGG - chr1_2:45799504-45799523 None:intergenic 55.0%
! ACTCTCGCCGGAGCTTTTGA+AGG + chr1_2:45799536-45799555 Msa0072750:CDS 55.0%
! CTCTCGCCGGAGCTTTTGAA+GGG + chr1_2:45799537-45799556 Msa0072750:CDS 55.0%
!! CCCTTGGGGCATTGGTTAAG+AGG + chr1_2:45800025-45800044 Msa0072750:intron 55.0%
! GGCGGATCAAATGCTTGCTG+AGG + chr1_2:45800829-45800848 Msa0072750:CDS 55.0%
CCGCTTAGTGGGAAAAGGCT+TGG - chr1_2:45801931-45801950 None:intergenic 55.0%
! CTTTTCCCACTAAGCGGGGT+CGG + chr1_2:45801934-45801953 Msa0072750:intron 55.0%
TGGCCAACTCTGCTATGACG+TGG + chr1_2:45802531-45802550 Msa0072750:intron 55.0%
TGCTGCACAAGAGGAGTTGG+TGG + chr1_2:45802817-45802836 Msa0072750:intron 55.0%
! GCTGCACAAGAGGAGTTGGT+GGG + chr1_2:45802818-45802837 Msa0072750:intron 55.0%
!! GGAGTTGGTGGGACGAGATA+TGG + chr1_2:45802829-45802848 Msa0072750:intron 55.0%
! AGGAGGTGCATAACCGAAGG+TGG + chr1_2:45802944-45802963 Msa0072750:intron 55.0%
! GGAGGTGCATAACCGAAGGT+GGG + chr1_2:45802945-45802964 Msa0072750:intron 55.0%
! GCTGCAGTGTTGGATGTAGC+AGG + chr1_2:45803001-45803020 Msa0072750:intron 55.0%
TGGATGTAGCAGGTTCCGTG+TGG + chr1_2:45803011-45803030 Msa0072750:intron 55.0%
! ATTGCTGTAGGAAGTGCGGC+TGG + chr1_2:45803093-45803112 Msa0072750:intron 55.0%
!! GAAGTGCGGCTGGTGTTATG+TGG + chr1_2:45803103-45803122 Msa0072750:intron 55.0%
! TGCCCGTGTCTGTTCTGGTT+TGG + chr1_2:45803133-45803152 Msa0072750:intron 55.0%
!! CCGTGGCTTTGATCAGCAAC+AGG + chr1_2:45804236-45804255 Msa0072750:CDS 55.0%
TACTCTGCTGAGTACACCCG+TGG + chr1_2:45804398-45804417 Msa0072750:CDS 55.0%
AGGCTCTTGTTCTTGGCCAC+GGG - chr1_2:45804417-45804436 None:intergenic 55.0%
CAGGCTCTTGTTCTTGGCCA+CGG - chr1_2:45804418-45804437 None:intergenic 55.0%
TTGGTAGGGCTGGGCGATTT+GGG + chr1_2:45804462-45804481 Msa0072750:CDS 55.0%
GCCAGTCAAATCCCCTGAGT+TGG - chr1_2:45805244-45805263 None:intergenic 55.0%
! CCAAAGGCTAGCTCGGATCA+AGG - chr1_2:45805327-45805346 None:intergenic 55.0%
!! CCTTGATCCGAGCTAGCCTT+TGG + chr1_2:45805324-45805343 Msa0072750:intron 55.0%
!! AGGAGTGTTCGCGACTTGGG+GGG - chr1_2:45799076-45799095 None:intergenic 60.0%
!! GAGGAGTGTTCGCGACTTGG+GGG - chr1_2:45799077-45799096 None:intergenic 60.0%
CCTCCGTAACCCTAACCCAC+CGG + chr1_2:45799142-45799161 Msa0072750:five_prime_UTR 60.0%
!! GCTCCGGTGGGTTAGGGTTA+CGG - chr1_2:45799148-45799167 None:intergenic 60.0%
!! AGTGGAGGAGAGGTGGTGGA+AGG - chr1_2:45799194-45799213 None:intergenic 60.0%
! GCCCAGCTTTTGGATGGCAG+TGG - chr1_2:45799212-45799231 None:intergenic 60.0%
! GGCTTGATCGGCCCAGCTTT+TGG - chr1_2:45799222-45799241 None:intergenic 60.0%
GGCGGAGGTGGAGGTTTGAT+TGG - chr1_2:45799255-45799274 None:intergenic 60.0%
GAGGGAAGAGGTTTCGTCGG+CGG - chr1_2:45799276-45799295 None:intergenic 60.0%
!! AAGGGCGCCTATTATGGCGC+AGG + chr1_2:45800718-45800737 Msa0072750:CDS 60.0%
CGACCCCGCTTAGTGGGAAA+AGG - chr1_2:45801936-45801955 None:intergenic 60.0%
TGTAGCCGACCCCGCTTAGT+GGG - chr1_2:45801942-45801961 None:intergenic 60.0%
ATGTAGCCGACCCCGCTTAG+TGG - chr1_2:45801943-45801962 None:intergenic 60.0%
ACTAAGCGGGGTCGGCTACA+TGG + chr1_2:45801942-45801961 Msa0072750:intron 60.0%
TAGGAAGGGCAGGTGGATGC+AGG + chr1_2:45802735-45802754 Msa0072750:intron 60.0%
GGGCAGGTGGATGCAGGAAA+AGG + chr1_2:45802741-45802760 Msa0072750:intron 60.0%
GACACGTGGCAATGAGGGAG+CGG + chr1_2:45802867-45802886 Msa0072750:intron 60.0%
ACACGTGGCAATGAGGGAGC+GGG + chr1_2:45802868-45802887 Msa0072750:intron 60.0%
AGGGAGCGGGAGAGAGGATA+CGG + chr1_2:45802881-45802900 Msa0072750:intron 60.0%
CTCTCTGCCCGTGTCTGTTC+TGG + chr1_2:45803128-45803147 Msa0072750:intron 60.0%
TCGACCGATGTTCTTGCCCG+TGG + chr1_2:45804219-45804238 Msa0072750:CDS 60.0%
!! TTGCACAGGGTTGGTAGGGC+TGG + chr1_2:45804452-45804471 Msa0072750:CDS 60.0%
!! TGCACAGGGTTGGTAGGGCT+GGG + chr1_2:45804453-45804472 Msa0072750:CDS 60.0%
! GTTGGTAGGGCTGGGCGATT+TGG + chr1_2:45804461-45804480 Msa0072750:CDS 60.0%
CTCACTCTGCCCAACCCACA+AGG - chr1_2:45804926-45804945 None:intergenic 60.0%
!! CCGGTGGGTTAGGGTTACGG+AGG - chr1_2:45799145-45799164 None:intergenic 65.0%
TGGCAGTGGAGGAGAGGTGG+TGG - chr1_2:45799198-45799217 None:intergenic 65.0%
GGATGGCAGTGGAGGAGAGG+TGG - chr1_2:45799201-45799220 None:intergenic 65.0%
GGAAGAGGTTTCGTCGGCGG+CGG - chr1_2:45799273-45799292 None:intergenic 65.0%
GCAATGAGGGAGCGGGAGAG+AGG + chr1_2:45802875-45802894 Msa0072750:intron 65.0%
! GCTGGGCGATTTGGGCGCAA+GGG + chr1_2:45804470-45804489 Msa0072750:CDS 65.0%
AGAGGTTTCGTCGGCGGCGG+AGG - chr1_2:45799270-45799289 None:intergenic 70.0%
! GGCTGGGCGATTTGGGCGCA+AGG + chr1_2:45804469-45804488 Msa0072750:CDS 70.0%
TTCGTCGGCGGCGGAGGTGG+AGG - chr1_2:45799264-45799283 None:intergenic 75.0%
GGTTTCGTCGGCGGCGGAGG+TGG - chr1_2:45799267-45799286 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 45799011 45806316 45799011 ID=Msa0072750;Name=Msa0072750
chr1_2 mRNA 45799011 45806316 45799011 ID=Msa0072750-mRNA-1;Parent=Msa0072750;Name=Msa0072750-mRNA-1;_AED=0.05;_eAED=0.05;_QI=171|1|1|1|1|1|8|552|490
chr1_2 exon 45799011 45799379 45799011 ID=Msa0072750-mRNA-1:exon:13901;Parent=Msa0072750-mRNA-1
chr1_2 exon 45799483 45799776 45799483 ID=Msa0072750-mRNA-1:exon:13902;Parent=Msa0072750-mRNA-1
chr1_2 exon 45800623 45800850 45800623 ID=Msa0072750-mRNA-1:exon:13903;Parent=Msa0072750-mRNA-1
chr1_2 exon 45801703 45801768 45801703 ID=Msa0072750-mRNA-1:exon:13904;Parent=Msa0072750-mRNA-1
chr1_2 exon 45803850 45804257 45803850 ID=Msa0072750-mRNA-1:exon:13905;Parent=Msa0072750-mRNA-1
chr1_2 exon 45804362 45804491 45804362 ID=Msa0072750-mRNA-1:exon:13906;Parent=Msa0072750-mRNA-1
chr1_2 exon 45805486 45805571 45805486 ID=Msa0072750-mRNA-1:exon:13907;Parent=Msa0072750-mRNA-1
chr1_2 exon 45805702 45806316 45805702 ID=Msa0072750-mRNA-1:exon:13908;Parent=Msa0072750-mRNA-1
chr1_2 five_prime_UTR 45799011 45799181 45799011 ID=Msa0072750-mRNA-1:five_prime_utr;Parent=Msa0072750-mRNA-1
chr1_2 CDS 45799182 45799379 45799182 ID=Msa0072750-mRNA-1:cds;Parent=Msa0072750-mRNA-1
chr1_2 CDS 45799483 45799776 45799483 ID=Msa0072750-mRNA-1:cds;Parent=Msa0072750-mRNA-1
chr1_2 CDS 45800623 45800850 45800623 ID=Msa0072750-mRNA-1:cds;Parent=Msa0072750-mRNA-1
chr1_2 CDS 45801703 45801768 45801703 ID=Msa0072750-mRNA-1:cds;Parent=Msa0072750-mRNA-1
chr1_2 CDS 45803850 45804257 45803850 ID=Msa0072750-mRNA-1:cds;Parent=Msa0072750-mRNA-1
chr1_2 CDS 45804362 45804491 45804362 ID=Msa0072750-mRNA-1:cds;Parent=Msa0072750-mRNA-1
chr1_2 CDS 45805486 45805571 45805486 ID=Msa0072750-mRNA-1:cds;Parent=Msa0072750-mRNA-1
chr1_2 CDS 45805702 45805764 45805702 ID=Msa0072750-mRNA-1:cds;Parent=Msa0072750-mRNA-1
chr1_2 three_prime_UTR 45805765 45806316 45805765 ID=Msa0072750-mRNA-1:three_prime_utr;Parent=Msa0072750-mRNA-1
Gene Sequence

>Msa0072750

ATGTCAGAACCTTCCACCACCTCTCCTCCACTGCCATCCAAAAGCTGGGCCGATCAAGCCGACGAAGAAACCAATCAAACCTCCACCTCCGCCGCCGACGAAACCTCTTCCCTCAACGTCAATGATTTAACCATCGATGAAGAAAACAAATCCCATTCCAAATCTCTAGATGATCCCGACGACACCAACATTACAGCGGTTACAGCTGGAGACACTCCTTACACATCCGCCACGACGTTTGAAGAGCTATCACTCTCGCCGGAGCTTTTGAAGGGATTATATGTGGAAATGAAGTTTGAAAAACCTAGCAAAATTCAAGCTAAGAGTTTGCCCATGATTCTTAATCCTCCACATAGGGATTTGATTGCTCAAGCACATAATGGTTCTGGAAAAACTACTTGTTTTAATCTTGGGATGCTTAGTAGGGTTGATCCCAATCTGCAAGCTCCTCAAGCTCTATGTATTTGTCCTACTAGAGAGTTGGCTATTCAGAACATTGAGGTTCTCCGTAAGATGGGGAAGTACACGGGGATTAGCTCAGAATGTGCAGTTCCTATGGACAGAAGGGATTCAATTCCGCCATCAAAAAGGGCGCCTATTATGGCGCAGGTTGTTATTGGTACTCCTGGCACAATTAAGAATTTGATTACTTATAAGAAACTTGGAGTGACAAAATTGAAGATTCTCGTTTTTGATGAGGCGGATCAAATGCTTGCTGAGGATGGATTTAGAGATGATTCTCTGAGAATAATGAAAGAAATAGAGAGATTCAATTCAAGCTGTCAGGTTCTTCTGTTTTCTGCTACATTTAATGACACTGTCAAGAATTTTGCTACAAGGGTTGTTGGGAAAAAGGAGCATAATGAACTTTTTGTGAAGAAAGAGGAGCTATCTTTAGATGCAGTAAAACAGTACAAAGTTCTTGTTCCTGACGAGCTTGCTAAGATTGACGTGATTAAAGATTATATATTTGAAATAGGAGAGAATGTGGGGCAAACTATTATATTTGTGCGCACTAGAAATAGTGCAAAAATGTTGCACAAAGCTCTTGTTGATTTAGGCTATGAGGTCACTTCCATACAAGGTGCTCTTGACCATGATGATAGAGACAAGATCGTCAAAGAGTTCAAAGATGGTTTGACTCAGGTTCTTATATCGACCGATGTTCTTGCCCGTGGCTTTGATCAGCAACAGGTTAATTTGGTTATAAACTATGATCTTCCACTGAAGTACTCTGCTGAGTACACCCGTGGCCAAGAACAAGAGCCTGATTATGAGGTGTATTTGCACAGGGTTGGTAGGGCTGGGCGATTTGGGCGCAAGGGGGCTGTATTTAACCTGATATGTGGTGAAAGGGATGAAAAAACCTTGTCAAAGATTGAAAAACATTTTGGCACCTATATAAAAGAGGTGAAAGACAGAAGTGTTGAAGACTATAAAGTTGCTCTTAAAGAAGCTGGTTTACTGTTTTGA
Protein sequence

>Msa0072750

MSEPSTTSPPLPSKSWADQADEETNQTSTSAADETSSLNVNDLTIDEENKSHSKSLDDPDDTNITAVTAGDTPYTSATTFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPMILNPPHRDLIAQAHNGSGKTTCFNLGMLSRVDPNLQAPQALCICPTRELAIQNIEVLRKMGKYTGISSECAVPMDRRDSIPPSKRAPIMAQVVIGTPGTIKNLITYKKLGVTKLKILVFDEADQMLAEDGFRDDSLRIMKEIERFNSSCQVLLFSATFNDTVKNFATRVVGKKEHNELFVKKEELSLDAVKQYKVLVPDELAKIDVIKDYIFEIGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHDDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYTRGQEQEPDYEVYLHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYIKEVKDRSVEDYKVALKEAGLLF*