Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074070 | XP_013468976.1 | 96.907 | 97 | 3 | 0 | 30 | 126 | 48 | 144 | 4.71e-62 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074070 | sp|P29063|PR4B_TOBAC | 81.818 | 99 | 18 | 0 | 28 | 126 | 47 | 145 | 8.41e-57 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074070 | A0A072VNL8 | 96.907 | 97 | 3 | 0 | 30 | 126 | 48 | 144 | 2.25e-62 | 196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074070 | Msa0172430 | 0.875486 | 2.968045e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074070 | MtrunA17_Chr1g0190671 | 96.907 | 97 | 3 | 0 | 30 | 126 | 48 | 144 | 4.33e-66 | 196 |
| Msa0074070 | MtrunA17_Chr1g0190661 | 89.583 | 96 | 10 | 0 | 31 | 126 | 49 | 144 | 2.66e-61 | 184 |
| Msa0074070 | MtrunA17_Chr1g0190651 | 88.660 | 97 | 11 | 0 | 30 | 126 | 48 | 144 | 1.15e-59 | 180 |
| Msa0074070 | MtrunA17_Chr7g0274181 | 76.289 | 97 | 23 | 0 | 30 | 126 | 88 | 184 | 6.59e-51 | 160 |
| Msa0074070 | MtrunA17_Chr1g0190641 | 68.687 | 99 | 31 | 0 | 28 | 126 | 41 | 139 | 2.18e-48 | 151 |
| Msa0074070 | MtrunA17_Chr6g0484021 | 55.140 | 107 | 37 | 1 | 31 | 126 | 73 | 179 | 4.49e-37 | 132 |
| Msa0074070 | MtrunA17_Chr6g0484041 | 50.476 | 105 | 41 | 2 | 31 | 126 | 65 | 167 | 9.11e-30 | 112 |
| Msa0074070 | MtrunA17_Chr6g0484031 | 47.573 | 103 | 47 | 1 | 31 | 126 | 43 | 145 | 1.88e-28 | 107 |
| Msa0074070 | MtrunA17_Chr6g0483971 | 51.042 | 96 | 43 | 2 | 33 | 126 | 49 | 142 | 5.10e-26 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074070 | AT3G04720.1 | 73.196 | 97 | 26 | 0 | 30 | 126 | 95 | 191 | 2.91e-48 | 154 |
Find 53 sgRNAs with CRISPR-Local
Find 593 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATAGCTCCCTGTGGGCC+TGG | 0.246487 | 1_2:-48250775 | None:intergenic |
| ATATAGCTCCCTGTGGGCCT+GGG | 0.358520 | 1_2:-48250774 | None:intergenic |
| TTGTCATGGCGTCAAAAGTA+TGG | 0.371251 | 1_2:+48250853 | Msa0074070:CDS |
| GTCTCTACCGCGAGGACCCT+GGG | 0.394792 | 1_2:-48250896 | None:intergenic |
| TAGTGAGGGCCCAGGCCCAC+AGG | 0.444528 | 1_2:+48250765 | Msa0074070:intron |
| CAGGTGACAAATACTGCAAC+CGG | 0.466094 | 1_2:+48251698 | Msa0074070:intron |
| CTGCTGGTAACCTTGTCTAT+TGG | 0.469652 | 1_2:-48251804 | None:intergenic |
| CTCTTGCGGCAAGTGCTTGA+GGG | 0.475168 | 1_2:+48250918 | Msa0074070:CDS |
| AGGACCCTGGGGTCCACAAA+AGG | 0.477350 | 1_2:-48250884 | None:intergenic |
| AGTCTCTACCGCGAGGACCC+TGG | 0.482201 | 1_2:-48250897 | None:intergenic |
| TCTCACTGTTGCCTGAGCTC+CGG | 0.483294 | 1_2:-48251717 | None:intergenic |
| CCAGTGTATACTGTGCTACA+TGG | 0.487560 | 1_2:+48250815 | Msa0074070:CDS |
| GGCCCACAGGGAGCTATATG+TGG | 0.495595 | 1_2:+48250778 | Msa0074070:CDS |
| GATGAAATGGTGGTCGAAGA+TGG | 0.496306 | 1_2:+48242137 | Msa0074070:CDS |
| AAATACTGCAACCGGAGCTC+AGG | 0.499017 | 1_2:+48251706 | Msa0074070:CDS |
| ACTCTTGCGGCAAGTGCTTG+AGG | 0.504119 | 1_2:+48250917 | Msa0074070:CDS |
| CATGGCGTCAAAAGTATGGC+TGG | 0.519495 | 1_2:+48250857 | Msa0074070:CDS |
| TTACCAGCAGGGTCACCTTA+CGG | 0.525799 | 1_2:+48251817 | Msa0074070:CDS |
| GCACAGTATACACTGGCAGC+AGG | 0.528581 | 1_2:-48250808 | None:intergenic |
| ATGGTCCAAGATGGATGAAA+TGG | 0.531481 | 1_2:+48242124 | None:intergenic |
| ATGGACAGAGTGGTGGTTGG+TGG | 0.550604 | 1_2:+48242156 | Msa0074070:CDS |
| TTTGACGCCATGACAAGGGC+TGG | 0.551508 | 1_2:-48250846 | None:intergenic |
| TGCCAATGGTGGGTTAGACT+TGG | 0.552806 | 1_2:+48251754 | Msa0074070:CDS |
| ATGCCAACCAGCCCTTGTCA+TGG | 0.561952 | 1_2:+48250839 | Msa0074070:CDS |
| TGCAAATGTAGTGAGGGCCC+AGG | 0.562233 | 1_2:+48250757 | Msa0074070:intron |
| CAATAGACAAGGTTACCAGC+AGG | 0.562787 | 1_2:+48251805 | Msa0074070:CDS |
| CTAACCCACCATTGGCACAT+TGG | 0.580120 | 1_2:-48251748 | None:intergenic |
| TAACCGTAAGGTGACCCTGC+TGG | 0.587993 | 1_2:-48251820 | None:intergenic |
| ACGCCATGACAAGGGCTGGT+TGG | 0.589508 | 1_2:-48250842 | None:intergenic |
| ATCCAAGTCTAACCCACCAT+TGG | 0.590223 | 1_2:-48251756 | None:intergenic |
| CAAAGACATAGTTAACCGTA+AGG | 0.593715 | 1_2:-48251832 | None:intergenic |
| GTATACACTGGCAGCAGGGA+CGG | 0.605651 | 1_2:-48250803 | None:intergenic |
| AGTGAGGGCCCAGGCCCACA+GGG | 0.605997 | 1_2:+48250766 | Msa0074070:intron |
| TCAGGCAACAGTGAGAATAG+TGG | 0.607392 | 1_2:+48251724 | Msa0074070:CDS |
| GCCCACAGGGAGCTATATGT+GGG | 0.615801 | 1_2:+48250779 | Msa0074070:CDS |
| CAGTGTATACTGTGCTACAT+GGG | 0.615919 | 1_2:+48250816 | Msa0074070:CDS |
| AATAGACAAGGTTACCAGCA+GGG | 0.619955 | 1_2:+48251806 | Msa0074070:CDS |
| CAAATTGATACCAATAGACA+AGG | 0.622899 | 1_2:+48251794 | Msa0074070:CDS |
| GTGGACCAATGTGCCAATGG+TGG | 0.630103 | 1_2:+48251743 | Msa0074070:CDS |
| CACAGTATACACTGGCAGCA+GGG | 0.645468 | 1_2:-48250807 | None:intergenic |
| TCTCTACCGCGAGGACCCTG+GGG | 0.650500 | 1_2:-48250895 | None:intergenic |
| GTCGAAGATGGACAGAGTGG+TGG | 0.650540 | 1_2:+48242149 | Msa0074070:CDS |
| ATAGTGGACCAATGTGCCAA+TGG | 0.652412 | 1_2:+48251740 | Msa0074070:CDS |
| TGGACCAATGTGCCAATGGT+GGG | 0.652500 | 1_2:+48251744 | Msa0074070:CDS |
| CCATGTAGCACAGTATACAC+TGG | 0.663920 | 1_2:-48250815 | None:intergenic |
| ACCCACATATAGCTCCCTGT+GGG | 0.668270 | 1_2:-48250780 | None:intergenic |
| TGTGGACCCCAGGGTCCTCG+CGG | 0.678697 | 1_2:+48250889 | Msa0074070:CDS |
| GACCCACATATAGCTCCCTG+TGG | 0.680507 | 1_2:-48250781 | None:intergenic |
| AAGATGGACAGAGTGGTGGT+TGG | 0.680590 | 1_2:+48242153 | Msa0074070:CDS |
| GTCCAAGATGGATGAAATGG+TGG | 0.684337 | 1_2:+48242127 | None:intergenic |
| CCGCAAGAGTCTCTACCGCG+AGG | 0.740415 | 1_2:-48250904 | None:intergenic |
| CCTCGCGGTAGAGACTCTTG+CGG | 0.755069 | 1_2:+48250904 | Msa0074070:CDS |
| GTGGTCGAAGATGGACAGAG+TGG | 0.772605 | 1_2:+48242146 | Msa0074070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATCAAATAAATATAAAAT+AGG | - | chr1_2:48242415-48242434 | None:intergenic | 10.0% |
| !! | AAAATTTAAAAACAAATACT+TGG | - | chr1_2:48244451-48244470 | None:intergenic | 10.0% |
| !!! | AATATTGTTTTATTTTTTGT+GGG | - | chr1_2:48244959-48244978 | None:intergenic | 10.0% |
| !!! | TAATATTGTTTTATTTTTTG+TGG | - | chr1_2:48244960-48244979 | None:intergenic | 10.0% |
| !! | TAATAATTAACAACATTAAA+AGG | + | chr1_2:48245798-48245817 | Msa0074070:intron | 10.0% |
| !! | AATAATTAACAACATTAAAA+GGG | + | chr1_2:48245799-48245818 | Msa0074070:intron | 10.0% |
| !! | AGATAATAAAAAATATTTAG+TGG | + | chr1_2:48246704-48246723 | Msa0074070:intron | 10.0% |
| !! | ATAATAAAATCATATGTTTA+TGG | - | chr1_2:48247662-48247681 | None:intergenic | 10.0% |
| !!! | ATTTTTTATCTCAATATTTT+AGG | + | chr1_2:48248588-48248607 | Msa0074070:intron | 10.0% |
| !! | TTATAAATTCCAATAAATAA+AGG | - | chr1_2:48249028-48249047 | None:intergenic | 10.0% |
| !! | NNNNTTTAAAAGTAATACTT+TGG | - | chr1_2:48249340-48249359 | None:intergenic | 10.0% |
| !!! | GAGAAAATTATTTTAATTAA+CGG | + | chr1_2:48249673-48249692 | Msa0074070:intron | 10.0% |
| !!! | TTATTTTTTTTTGTTATTGA+GGG | - | chr1_2:48249815-48249834 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTTTGTTATTG+AGG | - | chr1_2:48249816-48249835 | None:intergenic | 10.0% |
| !! | CTATATTATATATATACAAA+AGG | - | chr1_2:48249875-48249894 | None:intergenic | 10.0% |
| !!! | CTTTTGTATATATATAATAT+AGG | + | chr1_2:48249873-48249892 | Msa0074070:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTGTA+GGG | - | chr1_2:48249977-48249996 | None:intergenic | 10.0% |
| !!! | TATAAGTAAATTTTTTTTGT+AGG | - | chr1_2:48249978-48249997 | None:intergenic | 10.0% |
| !!! | ATATAAGAGTATATATTATA+GGG | - | chr1_2:48250435-48250454 | None:intergenic | 10.0% |
| !!! | AATATAAGAGTATATATTAT+AGG | - | chr1_2:48250436-48250455 | None:intergenic | 10.0% |
| !! | AATATATACTCTTATATTAT+TGG | + | chr1_2:48250438-48250457 | Msa0074070:intron | 10.0% |
| !!! | TTTTTTTTTTTTGTTATTGA+GGG | - | chr1_2:48250547-48250566 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTGTTATTG+AGG | - | chr1_2:48250548-48250567 | None:intergenic | 10.0% |
| !! | ATGAAAATAATTTATAGTTT+AGG | + | chr1_2:48251127-48251146 | Msa0074070:intron | 10.0% |
| !! | TGAAAATAATTTATAGTTTA+GGG | + | chr1_2:48251128-48251147 | Msa0074070:intron | 10.0% |
| !! | ATTAAATAATTAAATTAGCA+AGG | + | chr1_2:48251289-48251308 | Msa0074070:intron | 10.0% |
| !! | ATTCTTTAATCATAAGTATA+TGG | + | chr1_2:48242762-48242781 | Msa0074070:intron | 15.0% |
| !!! | TTTTGATGTTATAGAAATTA+GGG | + | chr1_2:48242821-48242840 | Msa0074070:intron | 15.0% |
| !! | TATAATCATTCATATAAAGT+TGG | + | chr1_2:48243708-48243727 | Msa0074070:intron | 15.0% |
| !! | ATAATCATTCATATAAAGTT+GGG | + | chr1_2:48243709-48243728 | Msa0074070:intron | 15.0% |
| !!! | AATAACCTTTTTTTTAGTAT+AGG | + | chr1_2:48245006-48245025 | Msa0074070:intron | 15.0% |
| !! | TTAAAGCAATTACAAATTAA+AGG | + | chr1_2:48246158-48246177 | Msa0074070:intron | 15.0% |
| !! | ATAAGTAACAAATATTACAA+GGG | + | chr1_2:48246562-48246581 | Msa0074070:intron | 15.0% |
| !! | GGAAAAAAATATATAATCTA+CGG | - | chr1_2:48248978-48248997 | None:intergenic | 15.0% |
| !!! | TTATAAGTGTATTTTTTTGA+TGG | + | chr1_2:48249042-48249061 | Msa0074070:intron | 15.0% |
| !!! | GATTTTGAAACAATTTTTTT+TGG | - | chr1_2:48249237-48249256 | None:intergenic | 15.0% |
| !! | AGAAAAATTTATTATTGCAT+TGG | - | chr1_2:48249277-48249296 | None:intergenic | 15.0% |
| !!! | TTGAGTTTTGATTATTATTT+TGG | - | chr1_2:48249768-48249787 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTGTTATTGAG+GGG | - | chr1_2:48249814-48249833 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr1_2:48250361-48250380 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr1_2:48250269-48250288 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr1_2:48250169-48250188 | Msa0074070:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr1_2:48250361-48250380 | Msa0074070:intron | 15.0% |
| !!! | TTTTTTTTTTTGTTATTGAG+GGG | - | chr1_2:48250546-48250565 | None:intergenic | 15.0% |
| !! | TAAAATTAAATGAGTAAGTA+CGG | - | chr1_2:48250949-48250968 | None:intergenic | 15.0% |
| !!! | TGTTGTGTATTGATATTTAT+TGG | + | chr1_2:48242486-48242505 | Msa0074070:intron | 20.0% |
| !! | CTTCCACTAAATAATAAAAT+AGG | - | chr1_2:48242517-48242536 | None:intergenic | 20.0% |
| !! | TAGGTTAAGGATTTATATAA+AGG | + | chr1_2:48242597-48242616 | Msa0074070:intron | 20.0% |
| !!! | GTTTTGATGTTATAGAAATT+AGG | + | chr1_2:48242820-48242839 | Msa0074070:intron | 20.0% |
| !! | TAATCTATTGAATTAACGTA+AGG | + | chr1_2:48242877-48242896 | Msa0074070:intron | 20.0% |
| !! | AATCTATTGAATTAACGTAA+GGG | + | chr1_2:48242878-48242897 | Msa0074070:intron | 20.0% |
| !! | GATTAACTTTCTCTAATTAT+AGG | + | chr1_2:48242904-48242923 | Msa0074070:intron | 20.0% |
| !! | TCAATTATAAACCAATTCAA+TGG | - | chr1_2:48243034-48243053 | None:intergenic | 20.0% |
| !!! | TTTGACTTGAAAATGATTTT+TGG | + | chr1_2:48243391-48243410 | Msa0074070:intron | 20.0% |
| !!! | CATATTTTTATGTCAAACAA+AGG | - | chr1_2:48243567-48243586 | None:intergenic | 20.0% |
| !! | TTTGACATAAAAATATGTTG+TGG | + | chr1_2:48243570-48243589 | Msa0074070:intron | 20.0% |
| !! | TAATCATTCATATAAAGTTG+GGG | + | chr1_2:48243710-48243729 | Msa0074070:intron | 20.0% |
| !! | TAGTCATTCATATATAAAGT+TGG | + | chr1_2:48243755-48243774 | Msa0074070:intron | 20.0% |
| !! | AGTCATTCATATATAAAGTT+GGG | + | chr1_2:48243756-48243775 | Msa0074070:intron | 20.0% |
| !! | TATTAAACATTTCATCTCAA+TGG | - | chr1_2:48244399-48244418 | None:intergenic | 20.0% |
| !! | ATATTTATATGTTGGGAAAA+CGG | + | chr1_2:48244608-48244627 | Msa0074070:intron | 20.0% |
| !!! | AAAAAACATTTTGTTTCAGT+GGG | - | chr1_2:48244704-48244723 | None:intergenic | 20.0% |
| !! | CAAAACCTATACTAAAAAAA+AGG | - | chr1_2:48245014-48245033 | None:intergenic | 20.0% |
| !! | GCTCATAAAAAATAGAAATA+CGG | + | chr1_2:48245422-48245441 | Msa0074070:intron | 20.0% |
| !!! | CTTATGTCATATGATTATTT+TGG | + | chr1_2:48245488-48245507 | Msa0074070:intron | 20.0% |
| !! | TTGTGAATATCAATTATGTT+TGG | - | chr1_2:48245582-48245601 | None:intergenic | 20.0% |
| !! | TAATGTACAAAATCATAAAG+TGG | - | chr1_2:48245897-48245916 | None:intergenic | 20.0% |
| !! | GAAATTAATATGGTAAACTA+AGG | - | chr1_2:48245954-48245973 | None:intergenic | 20.0% |
| !! | TATTGAAAGACTTTAATGAA+TGG | - | chr1_2:48245984-48246003 | None:intergenic | 20.0% |
| !! | TAAGCTAATTTCATTTGTTT+GGG | - | chr1_2:48246099-48246118 | None:intergenic | 20.0% |
| !! | ATAAGCTAATTTCATTTGTT+TGG | - | chr1_2:48246100-48246119 | None:intergenic | 20.0% |
| !! | AACCATCTAAATATAGATAA+TGG | + | chr1_2:48246135-48246154 | Msa0074070:intron | 20.0% |
| !! | AACCATTATCTATATTTAGA+TGG | - | chr1_2:48246140-48246159 | None:intergenic | 20.0% |
| !! | TTACAAGACAAAATTTGATA+TGG | - | chr1_2:48246372-48246391 | None:intergenic | 20.0% |
| !!! | CTTGTAATATTTGTTACTTA+TGG | - | chr1_2:48246563-48246582 | None:intergenic | 20.0% |
| !! | CATAAGTAACAAATATTACA+AGG | + | chr1_2:48246561-48246580 | Msa0074070:intron | 20.0% |
| !!! | TCATTTTGTGATAAGTTTAT+GGG | + | chr1_2:48246862-48246881 | Msa0074070:intron | 20.0% |
| !!! | AAAGAAAAAGTTGTTTCTTA+TGG | + | chr1_2:48247174-48247193 | Msa0074070:intron | 20.0% |
| !! | GTCAATAAAATTTGGATAAA+TGG | + | chr1_2:48247429-48247448 | Msa0074070:intron | 20.0% |
| !! | CAATAACGAGAAAAAATATT+TGG | + | chr1_2:48247708-48247727 | Msa0074070:intron | 20.0% |
| !!! | TTTTGTCTTTTCATCTTTTT+AGG | - | chr1_2:48247773-48247792 | None:intergenic | 20.0% |
| !! | GTTTACAAAATTATTACCAA+AGG | + | chr1_2:48248162-48248181 | Msa0074070:intron | 20.0% |
| !!! | AAAATAATAGCATTGATAGA+GGG | - | chr1_2:48248230-48248249 | None:intergenic | 20.0% |
| !! | AGTCATTAAGATAATCATTT+AGG | - | chr1_2:48248353-48248372 | None:intergenic | 20.0% |
| !! | AATGATTATCTTAATGACTT+TGG | + | chr1_2:48248354-48248373 | Msa0074070:intron | 20.0% |
| !! | AGTGTATAATAGAAAAGAAA+AGG | + | chr1_2:48249148-48249167 | Msa0074070:intron | 20.0% |
| !!! | TGTTTTTAAGAATGAAATGT+TGG | - | chr1_2:48249510-48249529 | None:intergenic | 20.0% |
| !!! | GGAAGTGTTTATTTTTTAAT+TGG | - | chr1_2:48249747-48249766 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr1_2:48250204-48250223 | Msa0074070:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr1_2:48250298-48250317 | Msa0074070:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr1_2:48250299-48250318 | Msa0074070:intron | 20.0% |
| !! | TATATATACTCTTGTATTGT+TGG | + | chr1_2:48250621-48250640 | Msa0074070:intron | 20.0% |
| !!! | GATGTAATGTTTTAATAGAA+TGG | + | chr1_2:48251448-48251467 | Msa0074070:intron | 20.0% |
| !!! | TATTGTTATTCAAGAGTAAA+AGG | - | chr1_2:48251483-48251502 | None:intergenic | 20.0% |
| !!! | ACTCTTGAATAACAATATTT+TGG | + | chr1_2:48251486-48251505 | Msa0074070:intron | 20.0% |
| !! | GATAGTTGAATTAATATTAG+TGG | + | chr1_2:48251667-48251686 | Msa0074070:intron | 20.0% |
| !! | ATAAAATAGGGCATTACAAA+GGG | - | chr1_2:48242402-48242421 | None:intergenic | 25.0% |
| !! | TATAAAATAGGGCATTACAA+AGG | - | chr1_2:48242403-48242422 | None:intergenic | 25.0% |
| !! | GCACCTATTTTATTATTTAG+TGG | + | chr1_2:48242511-48242530 | Msa0074070:intron | 25.0% |
| ! | ATTAGAATTATGAGACTTTG+TGG | + | chr1_2:48242547-48242566 | Msa0074070:intron | 25.0% |
| ! | TTAGAATTATGAGACTTTGT+GGG | + | chr1_2:48242548-48242567 | Msa0074070:intron | 25.0% |
| !!! | AATACGTGAAAACTGTTTTT+GGG | + | chr1_2:48242645-48242664 | Msa0074070:intron | 25.0% |
| !! | AATCAATCAATCTAAGGTAA+GGG | + | chr1_2:48242729-48242748 | Msa0074070:intron | 25.0% |
| !!! | TAAGTATATGGTTCTGAAAA+AGG | + | chr1_2:48242774-48242793 | Msa0074070:intron | 25.0% |
| !!! | AAGTATATGGTTCTGAAAAA+GGG | + | chr1_2:48242775-48242794 | Msa0074070:intron | 25.0% |
| ! | AAATTGATTGTTGAAAGAGT+AGG | + | chr1_2:48242854-48242873 | Msa0074070:intron | 25.0% |
| ! | GTTTGTGAATTTGTGAATTA+TGG | + | chr1_2:48242962-48242981 | Msa0074070:intron | 25.0% |
| !!! | TAGATTTTTGAAGTCGTAAT+TGG | + | chr1_2:48242988-48243007 | Msa0074070:intron | 25.0% |
| ! | AAGTAGAAAATCCATTGAAT+TGG | + | chr1_2:48243020-48243039 | Msa0074070:intron | 25.0% |
| ! | TTGGTTTATAATTGATGTTC+AGG | + | chr1_2:48243039-48243058 | Msa0074070:intron | 25.0% |
| !!! | AGTTTTGATTCAGCAAAAAT+CGG | + | chr1_2:48243243-48243262 | Msa0074070:intron | 25.0% |
| !!! | TAATTTTGTTAGCTTTCCAA+TGG | + | chr1_2:48243362-48243381 | Msa0074070:intron | 25.0% |
| ! | AACTTTCATGTTTATACCAA+AGG | - | chr1_2:48243516-48243535 | None:intergenic | 25.0% |
| ! | GAATGATTATACATTCAACA+GGG | - | chr1_2:48243699-48243718 | None:intergenic | 25.0% |
| ! | TGAATGATTATACATTCAAC+AGG | - | chr1_2:48243700-48243719 | None:intergenic | 25.0% |
| ! | AATCATTCATATAAAGTTGG+GGG | + | chr1_2:48243711-48243730 | Msa0074070:intron | 25.0% |
| ! | GTCATTCATATATAAAGTTG+GGG | + | chr1_2:48243757-48243776 | Msa0074070:intron | 25.0% |
| ! | TCATTCATATATAAAGTTGG+GGG | + | chr1_2:48243758-48243777 | Msa0074070:intron | 25.0% |
| ! | ATGAATGATTAAGCATTCAT+CGG | - | chr1_2:48243793-48243812 | None:intergenic | 25.0% |
| ! | TCATAGTAATACGTAACAAA+TGG | - | chr1_2:48244362-48244381 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATGATGTTG+AGG | + | chr1_2:48244416-48244435 | Msa0074070:intron | 25.0% |
| ! | TATTTATATGTTGGGAAAAC+GGG | + | chr1_2:48244609-48244628 | Msa0074070:intron | 25.0% |
| !!! | CAAAAAACATTTTGTTTCAG+TGG | - | chr1_2:48244705-48244724 | None:intergenic | 25.0% |
| ! | ATGCAAAGTTGAAGTAAAAA+AGG | - | chr1_2:48244771-48244790 | None:intergenic | 25.0% |
| !! | ATTGATTTAAGTGACGATAA+AGG | - | chr1_2:48244881-48244900 | None:intergenic | 25.0% |
| ! | GTTATTAGATTATTTGCAAG+GGG | - | chr1_2:48244992-48245011 | None:intergenic | 25.0% |
| ! | GGTTATTAGATTATTTGCAA+GGG | - | chr1_2:48244993-48245012 | None:intergenic | 25.0% |
| ! | AGGTTATTAGATTATTTGCA+AGG | - | chr1_2:48244994-48245013 | None:intergenic | 25.0% |
| !! | ACCTCTTTGGTAATATAAAT+GGG | - | chr1_2:48245335-48245354 | None:intergenic | 25.0% |
| !!! | AGTTTTATTCCTATCTACTA+TGG | - | chr1_2:48245557-48245576 | None:intergenic | 25.0% |
| !! | TTTTCTTCTCATAAAACAGT+TGG | - | chr1_2:48245734-48245753 | None:intergenic | 25.0% |
| ! | AGTTAAGACTTAAATACGAT+AGG | + | chr1_2:48245822-48245841 | Msa0074070:intron | 25.0% |
| ! | ATTACTTAGCTTAGGTTATT+AGG | - | chr1_2:48245922-48245941 | None:intergenic | 25.0% |
| ! | TAATATGGTAAACTAAGGAA+TGG | - | chr1_2:48245949-48245968 | None:intergenic | 25.0% |
| ! | TGGAACTCAAGAAATTAATA+TGG | - | chr1_2:48245964-48245983 | None:intergenic | 25.0% |
| ! | AAAAAATATGAGGCAAAAGA+TGG | + | chr1_2:48246306-48246325 | Msa0074070:intron | 25.0% |
| !!! | CTCGATTTTGATTAATTTGA+AGG | - | chr1_2:48246454-48246473 | None:intergenic | 25.0% |
| ! | TCAATCAATAAAATAGTGTG+TGG | - | chr1_2:48246492-48246511 | None:intergenic | 25.0% |
| ! | CTATGATCTCACTAATTAAA+AGG | + | chr1_2:48246671-48246690 | Msa0074070:intron | 25.0% |
| ! | CATAAACTTATCACAAAATG+AGG | - | chr1_2:48246863-48246882 | None:intergenic | 25.0% |
| !! | CTCATTTTGTGATAAGTTTA+TGG | + | chr1_2:48246861-48246880 | Msa0074070:intron | 25.0% |
| !!! | TTTAGTTTGAGAAAGACATT+TGG | - | chr1_2:48246972-48246991 | None:intergenic | 25.0% |
| ! | AAATGTCTTTCTCAAACTAA+AGG | + | chr1_2:48246971-48246990 | Msa0074070:intron | 25.0% |
| ! | AACTCATAGACAAAAAACAT+AGG | + | chr1_2:48247039-48247058 | Msa0074070:intron | 25.0% |
| !! | AAATGATAACGAAATCTACA+TGG | + | chr1_2:48247128-48247147 | Msa0074070:intron | 25.0% |
| !! | AATGATAACGAAATCTACAT+GGG | + | chr1_2:48247129-48247148 | Msa0074070:intron | 25.0% |
| ! | TATCATTTGTATATGTTTCC+CGG | + | chr1_2:48247280-48247299 | Msa0074070:intron | 25.0% |
| !!! | AGAGTGTTAACATCTTTTAT+TGG | - | chr1_2:48247348-48247367 | None:intergenic | 25.0% |
| ! | GATAAATGGACAATGATATA+AGG | + | chr1_2:48247443-48247462 | Msa0074070:intron | 25.0% |
| ! | GATGTATCATTGTAAATGAT+GGG | - | chr1_2:48247486-48247505 | None:intergenic | 25.0% |
| ! | AGATGTATCATTGTAAATGA+TGG | - | chr1_2:48247487-48247506 | None:intergenic | 25.0% |
| ! | TCATTTACAATGATACATCT+AGG | + | chr1_2:48247487-48247506 | Msa0074070:intron | 25.0% |
| !!! | TTGTTTATTTTGCGACTATA+TGG | - | chr1_2:48247561-48247580 | None:intergenic | 25.0% |
| !! | TGCGCAAGATATAAATTTTA+GGG | - | chr1_2:48247585-48247604 | None:intergenic | 25.0% |
| !!! | CAATATTACTTTAAGGTCTA+AGG | - | chr1_2:48247984-48248003 | None:intergenic | 25.0% |
| !! | TTTTGTAAACTATGTTGCAA+AGG | - | chr1_2:48248152-48248171 | None:intergenic | 25.0% |
| !!! | CAAAATAATAGCATTGATAG+AGG | - | chr1_2:48248231-48248250 | None:intergenic | 25.0% |
| ! | GTTGTCATCAACATTAATAA+TGG | - | chr1_2:48248513-48248532 | None:intergenic | 25.0% |
| ! | TTGAGATAAAAAATCCGAAA+AGG | - | chr1_2:48248582-48248601 | None:intergenic | 25.0% |
| !!! | TGAAGTTGTTATTTGCTATA+AGG | + | chr1_2:48248695-48248714 | Msa0074070:intron | 25.0% |
| !!! | TGTGTTTGTGAATTGATTTT+TGG | + | chr1_2:48248800-48248819 | Msa0074070:intron | 25.0% |
| !!! | TTTGTGAATTGATTTTTGGA+GGG | + | chr1_2:48248804-48248823 | Msa0074070:intron | 25.0% |
| ! | CATAATATATGTAAGGTATG+GGG | - | chr1_2:48249083-48249102 | None:intergenic | 25.0% |
| ! | GCATAATATATGTAAGGTAT+GGG | - | chr1_2:48249084-48249103 | None:intergenic | 25.0% |
| ! | TGCATAATATATGTAAGGTA+TGG | - | chr1_2:48249085-48249104 | None:intergenic | 25.0% |
| ! | AACAGTGCATAATATATGTA+AGG | - | chr1_2:48249090-48249109 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr1_2:48250009-48250028 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr1_2:48250010-48250029 | None:intergenic | 25.0% |
| ! | CAAGATTAAAACACTATGAA+AGG | + | chr1_2:48250072-48250091 | Msa0074070:intron | 25.0% |
| ! | AGGGCAAAAAAACAAAATTA+GGG | + | chr1_2:48250332-48250351 | Msa0074070:intron | 25.0% |
| !!! | TTTATTTTGCAAATGTAGTG+AGG | + | chr1_2:48250750-48250769 | Msa0074070:intron | 25.0% |
| !!! | TTATTTTGCAAATGTAGTGA+GGG | + | chr1_2:48250751-48250770 | Msa0074070:intron | 25.0% |
| ! | ACGAAATTGTTAAAAAGAGT+TGG | + | chr1_2:48251037-48251056 | Msa0074070:intron | 25.0% |
| ! | AACAAATCGAAAACGATTTA+TGG | - | chr1_2:48251086-48251105 | None:intergenic | 25.0% |
| !! | TGAATATAAAGATCGTGTTT+TGG | - | chr1_2:48251253-48251272 | None:intergenic | 25.0% |
| ! | TGATCAATATTAGTTAGTCA+AGG | + | chr1_2:48251619-48251638 | Msa0074070:intron | 25.0% |
| TATTTCACACTAGTGTACAT+AGG | - | chr1_2:48242378-48242397 | None:intergenic | 30.0% | |
| GGAAATAAGGGAAAATAAGT+AGG | + | chr1_2:48242578-48242597 | Msa0074070:intron | 30.0% | |
| AAGGGAAAATAAGTAGGTTA+AGG | + | chr1_2:48242584-48242603 | Msa0074070:intron | 30.0% | |
| ! | GAATACGTGAAAACTGTTTT+TGG | + | chr1_2:48242644-48242663 | Msa0074070:intron | 30.0% |
| !!! | AAAACTGTTTTTGGGAGAAA+AGG | + | chr1_2:48242653-48242672 | Msa0074070:intron | 30.0% |
| !!! | AAACTGTTTTTGGGAGAAAA+GGG | + | chr1_2:48242654-48242673 | Msa0074070:intron | 30.0% |
| ! | CAATCAATCAATCTAAGGTA+AGG | + | chr1_2:48242728-48242747 | Msa0074070:intron | 30.0% |
| CAAATTCACAAACAACAACA+TGG | - | chr1_2:48242955-48242974 | None:intergenic | 30.0% | |
| ! | GATTTTTGCTGAATCAAAAC+TGG | - | chr1_2:48243244-48243263 | None:intergenic | 30.0% |
| AGCAAATTCAAAACGGAAAA+GGG | - | chr1_2:48243316-48243335 | None:intergenic | 30.0% | |
| AAGCAAATTCAAAACGGAAA+AGG | - | chr1_2:48243317-48243336 | None:intergenic | 30.0% | |
| !! | TTCCGTTTTGAATTTGCTTT+TGG | + | chr1_2:48243318-48243337 | Msa0074070:intron | 30.0% |
| CACCAAAAGCAAATTCAAAA+CGG | - | chr1_2:48243323-48243342 | None:intergenic | 30.0% | |
| GTTATGATGAAAATACTCCA+AGG | + | chr1_2:48243421-48243440 | Msa0074070:intron | 30.0% | |
| AAACGCAAAAACAGAAAACA+GGG | - | chr1_2:48243466-48243485 | None:intergenic | 30.0% | |
| AAAACGCAAAAACAGAAAAC+AGG | - | chr1_2:48243467-48243486 | None:intergenic | 30.0% | |
| !! | CACACGTTTCTGTTTTAAAT+TGG | + | chr1_2:48243490-48243509 | Msa0074070:intron | 30.0% |
| !!! | TTCTGTTTTAAATTGGCCTT+TGG | + | chr1_2:48243497-48243516 | Msa0074070:intron | 30.0% |
| TTATGTCAAACAAAGGCTAA+TGG | - | chr1_2:48243560-48243579 | None:intergenic | 30.0% | |
| TGAATGATTAAGCATTCATC+GGG | - | chr1_2:48243792-48243811 | None:intergenic | 30.0% | |
| AAACAAATACTTGGCACTAA+AGG | - | chr1_2:48244442-48244461 | None:intergenic | 30.0% | |
| ATTTATATGTTGGGAAAACG+GGG | + | chr1_2:48244610-48244629 | Msa0074070:intron | 30.0% | |
| TTCAACTTGAATGAAAGGAA+TGG | - | chr1_2:48244643-48244662 | None:intergenic | 30.0% | |
| CAAGTTTCAACTTGAATGAA+AGG | - | chr1_2:48244648-48244667 | None:intergenic | 30.0% | |
| AGAAAAGATGAAGATTCGTT+TGG | - | chr1_2:48244810-48244829 | None:intergenic | 30.0% | |
| ! | CTCTTTGGTAATATAAATGG+GGG | - | chr1_2:48245333-48245352 | None:intergenic | 30.0% |
| ! | CCTCTTTGGTAATATAAATG+GGG | - | chr1_2:48245334-48245353 | None:intergenic | 30.0% |
| ! | GACCTCTTTGGTAATATAAA+TGG | - | chr1_2:48245336-48245355 | None:intergenic | 30.0% |
| TACTAATTTCTTGACCTCTT+TGG | - | chr1_2:48245348-48245367 | None:intergenic | 30.0% | |
| GGATGAACATTCATGAAAAT+TGG | + | chr1_2:48245443-48245462 | Msa0074070:intron | 30.0% | |
| ACAAACAAACCATAGTAGAT+AGG | + | chr1_2:48245545-48245564 | Msa0074070:intron | 30.0% | |
| ATGTGTAGTGTAAACATTTG+TGG | + | chr1_2:48245615-48245634 | Msa0074070:intron | 30.0% | |
| ACTTGGTTAAAATCTACGAA+TGG | + | chr1_2:48245698-48245717 | Msa0074070:intron | 30.0% | |
| CGATAGGTTAATTGTTTGTT+TGG | + | chr1_2:48245838-48245857 | Msa0074070:intron | 30.0% | |
| ATGGTCATATTACTTAGCTT+AGG | - | chr1_2:48245930-48245949 | None:intergenic | 30.0% | |
| TATGAACTTGCATTTGAACA+CGG | + | chr1_2:48246007-48246026 | Msa0074070:intron | 30.0% | |
| AGACCAACTAAATCAATAGA+CGG | - | chr1_2:48246239-48246258 | None:intergenic | 30.0% | |
| GAAAGATGCGAAAAAATATG+AGG | + | chr1_2:48246296-48246315 | Msa0074070:intron | 30.0% | |
| ! | ATTCGATCTAAAACCAAACA+TGG | - | chr1_2:48246422-48246441 | None:intergenic | 30.0% |
| TTTGTGATAAGTTTATGGGA+TGG | + | chr1_2:48246866-48246885 | Msa0074070:intron | 30.0% | |
| ! | TTTTGTGTTCTACGTAGATA+AGG | - | chr1_2:48246932-48246951 | None:intergenic | 30.0% |
| ! | TCAAGGTGGATTCAAAATAA+TGG | + | chr1_2:48247104-48247123 | Msa0074070:intron | 30.0% |
| AAAAGATGTTAACACTCTGA+AGG | + | chr1_2:48247350-48247369 | Msa0074070:intron | 30.0% | |
| CACTTATGTTTGCATTAAAG+TGG | + | chr1_2:48247389-48247408 | Msa0074070:intron | 30.0% | |
| ! | AATTTTATTGACCACTAGGA+GGG | - | chr1_2:48247421-48247440 | None:intergenic | 30.0% |
| ! | AAATTTTATTGACCACTAGG+AGG | - | chr1_2:48247422-48247441 | None:intergenic | 30.0% |
| TCCTAGTGGTCAATAAAATT+TGG | + | chr1_2:48247421-48247440 | Msa0074070:intron | 30.0% | |
| ! | TCCAAATTTTATTGACCACT+AGG | - | chr1_2:48247425-48247444 | None:intergenic | 30.0% |
| TGATATAAGGTTTAGTGTGA+AGG | + | chr1_2:48247456-48247475 | Msa0074070:intron | 30.0% | |
| ! | GTGCGCAAGATATAAATTTT+AGG | - | chr1_2:48247586-48247605 | None:intergenic | 30.0% |
| ! | AGTGTTTTATAGTTGAACGT+GGG | - | chr1_2:48247623-48247642 | None:intergenic | 30.0% |
| ATCATATGTTTATGGTTGAG+TGG | - | chr1_2:48247654-48247673 | None:intergenic | 30.0% | |
| GATTTATTCCATGTCAAACA+TGG | + | chr1_2:48247741-48247760 | Msa0074070:intron | 30.0% | |
| !! | TTTTGGTTACATGATTAGTG+AGG | - | chr1_2:48247952-48247971 | None:intergenic | 30.0% |
| !!! | GTCTAAGGAAACTTCTTTTT+TGG | - | chr1_2:48247969-48247988 | None:intergenic | 30.0% |
| TGTCTGGCAATATTACTTTA+AGG | - | chr1_2:48247991-48248010 | None:intergenic | 30.0% | |
| AAATGTTATCGTATGTTGTC+TGG | - | chr1_2:48248007-48248026 | None:intergenic | 30.0% | |
| TGAGTGTGTTTATAGATAGT+GGG | - | chr1_2:48248071-48248090 | None:intergenic | 30.0% | |
| ATGAGTGTGTTTATAGATAG+TGG | - | chr1_2:48248072-48248091 | None:intergenic | 30.0% | |
| CAGAAGTAGAATAAGAAGAA+TGG | + | chr1_2:48248270-48248289 | Msa0074070:intron | 30.0% | |
| !! | TGTTGCTTTCAAACTTGATA+TGG | + | chr1_2:48248296-48248315 | Msa0074070:intron | 30.0% |
| AAGCATTCAACAACATCATT+TGG | + | chr1_2:48248322-48248341 | Msa0074070:intron | 30.0% | |
| AGCATTCAACAACATCATTT+GGG | + | chr1_2:48248323-48248342 | Msa0074070:intron | 30.0% | |
| ! | GAGATATTATGAGCTTCTTT+TGG | - | chr1_2:48248422-48248441 | None:intergenic | 30.0% |
| CATTTATGAAATCTGAGAGA+TGG | - | chr1_2:48248753-48248772 | None:intergenic | 30.0% | |
| !! | GTTTGTGAATTGATTTTTGG+AGG | + | chr1_2:48248803-48248822 | Msa0074070:intron | 30.0% |
| !! | TTGTGAATTGATTTTTGGAG+GGG | + | chr1_2:48248805-48248824 | Msa0074070:intron | 30.0% |
| CCAATAAATAAAGGTAAGAG+AGG | - | chr1_2:48249019-48249038 | None:intergenic | 30.0% | |
| ! | CCTCTCTTACCTTTATTTAT+TGG | + | chr1_2:48249016-48249035 | Msa0074070:intron | 30.0% |
| TGTGCAGAATATTAATTGGA+GGG | - | chr1_2:48249311-48249330 | None:intergenic | 30.0% | |
| GTAGTGTGCAGAATATTAAT+TGG | - | chr1_2:48249315-48249334 | None:intergenic | 30.0% | |
| CTACACTACTTAAAAATCCT+GGG | - | chr1_2:48249486-48249505 | None:intergenic | 30.0% | |
| TTGAGGGGTAGTTATTATTT+AGG | - | chr1_2:48249799-48249818 | None:intergenic | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr1_2:48250392-48250411 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr1_2:48250391-48250410 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr1_2:48250376-48250395 | None:intergenic | 30.0% | |
| CAGGGCAAAAAAACAAAATT+AGG | + | chr1_2:48250331-48250350 | Msa0074070:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr1_2:48250376-48250395 | Msa0074070:intron | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr1_2:48250391-48250410 | Msa0074070:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr1_2:48250392-48250411 | Msa0074070:intron | 30.0% |
| TTATTGAGGGGTAGTTATTA+TGG | - | chr1_2:48249802-48249821 | None:intergenic | 30.0% | |
| ATACTACTCATCTATTGTAC+TGG | - | chr1_2:48250722-48250741 | None:intergenic | 30.0% | |
| CATAGACACGTTTACAATTA+GGG | + | chr1_2:48251060-48251079 | Msa0074070:intron | 30.0% | |
| GTTTCTTTATTGTGAAGATG+TGG | + | chr1_2:48251316-48251335 | Msa0074070:intron | 30.0% | |
| TTAATGCGATACAAAAACGA+TGG | + | chr1_2:48251521-48251540 | Msa0074070:intron | 30.0% | |
| ! | AAACACTAAGTTTTTCTGTG+TGG | + | chr1_2:48251565-48251584 | Msa0074070:intron | 30.0% |
| CAAATTGATACCAATAGACA+AGG | + | chr1_2:48251794-48251813 | Msa0074070:CDS | 30.0% | |
| GATCAATTGTTGAACAACGA+TGG | + | chr1_2:48242235-48242254 | Msa0074070:intron | 35.0% | |
| TTGAACAACGATGGTGAAAA+TGG | + | chr1_2:48242244-48242263 | Msa0074070:intron | 35.0% | |
| GTGAAAATGGTGATTGAGAA+TGG | + | chr1_2:48242257-48242276 | Msa0074070:intron | 35.0% | |
| ATTGAGAATGGTTGAAGTAG+CGG | + | chr1_2:48242269-48242288 | Msa0074070:intron | 35.0% | |
| CGTTGCAATCAATCAATCTA+AGG | + | chr1_2:48242723-48242742 | Msa0074070:intron | 35.0% | |
| TCAGGCTGTAGAATAATCAT+AGG | + | chr1_2:48243057-48243076 | Msa0074070:intron | 35.0% | |
| TGGAAAATCAGCTCAGAAAT+CGG | - | chr1_2:48243224-48243243 | None:intergenic | 35.0% | |
| AGATTTGCCTGACAGAAAAT+CGG | - | chr1_2:48243272-48243291 | None:intergenic | 35.0% | |
| !! | TGTTAGCTTTCCAATGGATT+TGG | + | chr1_2:48243368-48243387 | Msa0074070:intron | 35.0% |
| TCAAGTCAAACCAAATCCAT+TGG | - | chr1_2:48243381-48243400 | None:intergenic | 35.0% | |
| ATGATGAAAATACTCCAAGG+AGG | + | chr1_2:48243424-48243443 | Msa0074070:intron | 35.0% | |
| GAATGACTATGCATTCAACA+GGG | - | chr1_2:48243744-48243763 | None:intergenic | 35.0% | |
| TGAATGACTATGCATTCAAC+AGG | - | chr1_2:48243745-48243764 | None:intergenic | 35.0% | |
| GAATGATTAAGCATTCATCG+GGG | - | chr1_2:48243791-48243810 | None:intergenic | 35.0% | |
| !! | TTGATAATGCACTATGCATG+TGG | - | chr1_2:48243870-48243889 | None:intergenic | 35.0% |
| ! | TAATTTTGAATACGTCGCAG+CGG | - | chr1_2:48244485-48244504 | None:intergenic | 35.0% |
| AATCAGAGTTCATCACAAAC+AGG | - | chr1_2:48244579-48244598 | None:intergenic | 35.0% | |
| TGAAACTTGTAAGCTGCAAA+TGG | + | chr1_2:48244659-48244678 | Msa0074070:intron | 35.0% | |
| GAAACTTGTAAGCTGCAAAT+GGG | + | chr1_2:48244660-48244679 | Msa0074070:intron | 35.0% | |
| CGCTCTCAAAAATGTTTGTT+TGG | + | chr1_2:48244729-48244748 | Msa0074070:intron | 35.0% | |
| ! | CTCTTACAAGTCTCCTTTTT+CGG | + | chr1_2:48244828-48244847 | Msa0074070:intron | 35.0% |
| GGTAGAAAGTTATGGTTAGT+GGG | - | chr1_2:48244908-48244927 | None:intergenic | 35.0% | |
| CATAACTTTCTACCCAAGTT+GGG | + | chr1_2:48244914-48244933 | Msa0074070:intron | 35.0% | |
| ATAACTCACTAACCCAACTT+GGG | - | chr1_2:48244929-48244948 | None:intergenic | 35.0% | |
| !! | AAGTTGGGTTAGTGAGTTAT+GGG | + | chr1_2:48244929-48244948 | Msa0074070:intron | 35.0% |
| ATTAGATTATTTGCAAGGGG+TGG | - | chr1_2:48244989-48245008 | None:intergenic | 35.0% | |
| TTGATTCTGCGATAGAATTG+AGG | + | chr1_2:48245031-48245050 | Msa0074070:intron | 35.0% | |
| !! | TAGAGTGTTGATCAGAATTG+AGG | + | chr1_2:48245065-48245084 | Msa0074070:intron | 35.0% |
| TAATTCATACCTGACCTAAG+GGG | - | chr1_2:48245120-48245139 | None:intergenic | 35.0% | |
| CTAATTCATACCTGACCTAA+GGG | - | chr1_2:48245121-48245140 | None:intergenic | 35.0% | |
| TCTAATTCATACCTGACCTA+AGG | - | chr1_2:48245122-48245141 | None:intergenic | 35.0% | |
| CACAAATATGCACACACTAA+GGG | - | chr1_2:48245248-48245267 | None:intergenic | 35.0% | |
| ACACAAATATGCACACACTA+AGG | - | chr1_2:48245249-48245268 | None:intergenic | 35.0% | |
| TCACAAACTAAAGCAACAAG+GGG | - | chr1_2:48245276-48245295 | None:intergenic | 35.0% | |
| GTCACAAACTAAAGCAACAA+GGG | - | chr1_2:48245277-48245296 | None:intergenic | 35.0% | |
| TGTCACAAACTAAAGCAACA+AGG | - | chr1_2:48245278-48245297 | None:intergenic | 35.0% | |
| CCCCATTTATATTACCAAAG+AGG | + | chr1_2:48245331-48245350 | Msa0074070:intron | 35.0% | |
| CATTCTCACAATGATTCACT+TGG | + | chr1_2:48245681-48245700 | Msa0074070:intron | 35.0% | |
| ATCAATAGACGGTCTTTCAA+TGG | - | chr1_2:48246228-48246247 | None:intergenic | 35.0% | |
| !! | AGACCGTCTATTGATTTAGT+TGG | + | chr1_2:48246233-48246252 | Msa0074070:intron | 35.0% |
| ! | TATTTTGTAGCCTATGTGAG+TGG | - | chr1_2:48246274-48246293 | None:intergenic | 35.0% |
| AAAAGATGGATGTTGGAATC+AGG | + | chr1_2:48246320-48246339 | Msa0074070:intron | 35.0% | |
| AAAGATGGATGTTGGAATCA+GGG | + | chr1_2:48246321-48246340 | Msa0074070:intron | 35.0% | |
| GACAATAGTGTAGACAACTT+TGG | + | chr1_2:48246345-48246364 | Msa0074070:intron | 35.0% | |
| ACTTAATCACATGCCATGTT+TGG | + | chr1_2:48246406-48246425 | Msa0074070:intron | 35.0% | |
| GACTTTGTCTTCTTTGCTAA+AGG | + | chr1_2:48246776-48246795 | Msa0074070:intron | 35.0% | |
| ! | GATTTCTTACGTGTTGATGA+TGG | - | chr1_2:48246808-48246827 | None:intergenic | 35.0% |
| CAAAATGAGGTTTCAGATGA+TGG | - | chr1_2:48246850-48246869 | None:intergenic | 35.0% | |
| TCACATAACACATGTATCTC+TGG | - | chr1_2:48247000-48247019 | None:intergenic | 35.0% | |
| TGTTATGTGAAAAGACGCTT+TGG | + | chr1_2:48247010-48247029 | Msa0074070:intron | 35.0% | |
| CATAGGTTACAACACTATGA+AGG | + | chr1_2:48247056-48247075 | Msa0074070:intron | 35.0% | |
| AATGGTCGAATATCATCCAA+GGG | - | chr1_2:48247200-48247219 | None:intergenic | 35.0% | |
| !! | CAGTAAATTAAGTTGAGACC+GGG | - | chr1_2:48247301-48247320 | None:intergenic | 35.0% |
| !! | CCAGTAAATTAAGTTGAGAC+CGG | - | chr1_2:48247302-48247321 | None:intergenic | 35.0% |
| ! | TTTTGCGACTATATGGTTGT+CGG | - | chr1_2:48247554-48247573 | None:intergenic | 35.0% |
| ! | GAGTGTTTTATAGTTGAACG+TGG | - | chr1_2:48247624-48247643 | None:intergenic | 35.0% |
| TATGTTTATGGTTGAGTGGT+AGG | - | chr1_2:48247650-48247669 | None:intergenic | 35.0% | |
| !! | TTCATGTTGGATAATGGAGT+TGG | - | chr1_2:48247813-48247832 | None:intergenic | 35.0% |
| TTCAGCTTCATGTTGGATAA+TGG | - | chr1_2:48247819-48247838 | None:intergenic | 35.0% | |
| ! | AGTAGTTTTCAGCTTCATGT+TGG | - | chr1_2:48247826-48247845 | None:intergenic | 35.0% |
| !!! | GAGTTTTAGATCCTTAAACG+TGG | - | chr1_2:48248124-48248143 | None:intergenic | 35.0% |
| ! | CTTTTGGTAGATCGTAAGTA+GGG | - | chr1_2:48248406-48248425 | None:intergenic | 35.0% |
| ! | TCTTTTGGTAGATCGTAAGT+AGG | - | chr1_2:48248407-48248426 | None:intergenic | 35.0% |
| TCTTAATGTAACAAGCCTTG+AGG | + | chr1_2:48248448-48248467 | Msa0074070:intron | 35.0% | |
| ACTGTTTACATAACCCATCA+TGG | + | chr1_2:48248531-48248550 | Msa0074070:intron | 35.0% | |
| TTTACATAACCCATCATGGT+TGG | + | chr1_2:48248535-48248554 | Msa0074070:intron | 35.0% | |
| !!! | GGCTTATTTTGTCACCTTTT+CGG | + | chr1_2:48248565-48248584 | Msa0074070:intron | 35.0% |
| AGGCAAAAGAGCAAAAACAA+GGG | - | chr1_2:48248999-48249018 | None:intergenic | 35.0% | |
| !!! | TGTATTTTTTTGATGGTGCC+TGG | + | chr1_2:48249049-48249068 | Msa0074070:intron | 35.0% |
| !!! | GTATTTTTTTGATGGTGCCT+GGG | + | chr1_2:48249050-48249069 | Msa0074070:intron | 35.0% |
| !!! | TATTTTTTTGATGGTGCCTG+GGG | + | chr1_2:48249051-48249070 | Msa0074070:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr1_2:48249211-48249230 | None:intergenic | 35.0% |
| GTGTGCAGAATATTAATTGG+AGG | - | chr1_2:48249312-48249331 | None:intergenic | 35.0% | |
| CCTACACTACTTAAAAATCC+TGG | - | chr1_2:48249487-48249506 | None:intergenic | 35.0% | |
| !!! | CCAGGATTTTTAAGTAGTGT+AGG | + | chr1_2:48249484-48249503 | Msa0074070:intron | 35.0% |
| !!! | TTTGCGATAATTTTTTGCGG+AGG | + | chr1_2:48250207-48250226 | Msa0074070:intron | 35.0% |
| ! | TTGGTAAGTTGACTAAGTTC+TGG | + | chr1_2:48250457-48250476 | Msa0074070:intron | 35.0% |
| ! | ACTCATCTATTGTACTGGTA+TGG | - | chr1_2:48250717-48250736 | None:intergenic | 35.0% |
| GCATAGACACGTTTACAATT+AGG | + | chr1_2:48251059-48251078 | Msa0074070:intron | 35.0% | |
| TAGCTTCTACTCCACATATT+GGG | + | chr1_2:48251391-48251410 | Msa0074070:intron | 35.0% | |
| ! | TTTTTCTGTGTGGCTTTTTG+TGG | + | chr1_2:48251575-48251594 | Msa0074070:intron | 35.0% |
| ! | GCTTTTTGTGGACTTGAAAA+TGG | + | chr1_2:48251587-48251606 | Msa0074070:intron | 35.0% |
| ! | AATATTAGTGGTGATGATGC+AGG | + | chr1_2:48251679-48251698 | Msa0074070:intron | 35.0% |
| CAAAGACATAGTTAACCGTA+AGG | - | chr1_2:48251835-48251854 | None:intergenic | 35.0% | |
| GTGATTGAAGTAGTGGTTGA+TGG | + | chr1_2:48242178-48242197 | Msa0074070:intron | 40.0% | |
| !! | TTGAAGTAGTGGTTGATGGT+TGG | + | chr1_2:48242182-48242201 | Msa0074070:intron | 40.0% |
| ! | GTTGGAAGATTGGTAGTTAG+TGG | + | chr1_2:48242200-48242219 | Msa0074070:intron | 40.0% |
| TGGTAGTTAGTGGTTGTCAA+AGG | + | chr1_2:48242210-48242229 | Msa0074070:intron | 40.0% | |
| TAGTTAGTGGTTGTCAAAGG+TGG | + | chr1_2:48242213-48242232 | Msa0074070:intron | 40.0% | |
| TCGAAGTGGTGGTTAAATTG+CGG | + | chr1_2:48242302-48242321 | Msa0074070:intron | 40.0% | |
| CACACTAGTGTACATAGGTA+CGG | - | chr1_2:48242373-48242392 | None:intergenic | 40.0% | |
| TGTGGGCAGAATTGGAAATA+AGG | + | chr1_2:48242565-48242584 | Msa0074070:intron | 40.0% | |
| GTGGGCAGAATTGGAAATAA+GGG | + | chr1_2:48242566-48242585 | Msa0074070:intron | 40.0% | |
| TCTATAGACCTTCTCTTCTC+TGG | - | chr1_2:48242702-48242721 | None:intergenic | 40.0% | |
| AAAATCAGCTCAGAAATCGG+GGG | - | chr1_2:48243221-48243240 | None:intergenic | 40.0% | |
| GAAAATCAGCTCAGAAATCG+GGG | - | chr1_2:48243222-48243241 | None:intergenic | 40.0% | |
| GGAAAATCAGCTCAGAAATC+GGG | - | chr1_2:48243223-48243242 | None:intergenic | 40.0% | |
| ! | GATTTTCTGTCAGGCAAATC+TGG | + | chr1_2:48243271-48243290 | Msa0074070:intron | 40.0% |
| AGCCTATGCTCTATAAGTTG+AGG | + | chr1_2:48243824-48243843 | Msa0074070:intron | 40.0% | |
| ! | GCCTATGCTCTATAAGTTGA+GGG | + | chr1_2:48243825-48243844 | Msa0074070:intron | 40.0% |
| TATGCATGTGGTACCAATCA+GGG | - | chr1_2:48243858-48243877 | None:intergenic | 40.0% | |
| AGGCAACATTCAAACAGAAG+GGG | - | chr1_2:48244224-48244243 | None:intergenic | 40.0% | |
| GAGGCAACATTCAAACAGAA+GGG | - | chr1_2:48244225-48244244 | None:intergenic | 40.0% | |
| AGAGGCAACATTCAAACAGA+AGG | - | chr1_2:48244226-48244245 | None:intergenic | 40.0% | |
| TTTGAATGTTGCCTCTACGT+GGG | + | chr1_2:48244230-48244249 | Msa0074070:intron | 40.0% | |
| CTCACATCAACAGTTAATCC+TGG | - | chr1_2:48244270-48244289 | None:intergenic | 40.0% | |
| !! | ACATTTTGTTTCAGTGGGTC+TGG | - | chr1_2:48244699-48244718 | None:intergenic | 40.0% |
| !!! | TCCTTTTTCGGCTAGACTTT+CGG | + | chr1_2:48244840-48244859 | Msa0074070:intron | 40.0% |
| GGGTAGAAAGTTATGGTTAG+TGG | - | chr1_2:48244909-48244928 | None:intergenic | 40.0% | |
| CCAACTTGGGTAGAAAGTTA+TGG | - | chr1_2:48244916-48244935 | None:intergenic | 40.0% | |
| CCATAACTTTCTACCCAAGT+TGG | + | chr1_2:48244913-48244932 | Msa0074070:intron | 40.0% | |
| CATAACTCACTAACCCAACT+TGG | - | chr1_2:48244930-48244949 | None:intergenic | 40.0% | |
| !! | CAAGTTGGGTTAGTGAGTTA+TGG | + | chr1_2:48244928-48244947 | Msa0074070:intron | 40.0% |
| TGCGATAGAATTGAGGTCAA+AGG | + | chr1_2:48245038-48245057 | Msa0074070:intron | 40.0% | |
| ! | GACATGCACTCACATACTTT+TGG | + | chr1_2:48245163-48245182 | Msa0074070:intron | 40.0% |
| ! | TTGGGATGTGCTAACTTGTA+AGG | - | chr1_2:48246081-48246100 | None:intergenic | 40.0% |
| TGTTACAACTCCACTCACAT+AGG | + | chr1_2:48246261-48246280 | Msa0074070:intron | 40.0% | |
| ATGAGGCAAAAGATGGATGT+TGG | + | chr1_2:48246313-48246332 | Msa0074070:intron | 40.0% | |
| ACGACAACTCTCTAAGTAAG+TGG | + | chr1_2:48246615-48246634 | Msa0074070:intron | 40.0% | |
| AAAGACATTTGGCAAGAGTC+GGG | - | chr1_2:48246961-48246980 | None:intergenic | 40.0% | |
| GAAAGACATTTGGCAAGAGT+CGG | - | chr1_2:48246962-48246981 | None:intergenic | 40.0% | |
| TATGTGAAAAGACGCTTTGG+TGG | + | chr1_2:48247013-48247032 | Msa0074070:intron | 40.0% | |
| TGGAAGGTTTGAAAGCTTCA+AGG | + | chr1_2:48247087-48247106 | Msa0074070:intron | 40.0% | |
| AAGGTTTGAAAGCTTCAAGG+TGG | + | chr1_2:48247090-48247109 | Msa0074070:intron | 40.0% | |
| !! | AAGTTGTTTCTTATGGCCCT+TGG | + | chr1_2:48247181-48247200 | Msa0074070:intron | 40.0% |
| CAATGGTCGAATATCATCCA+AGG | - | chr1_2:48247201-48247220 | None:intergenic | 40.0% | |
| CCGGTCTCAACTTAATTTAC+TGG | + | chr1_2:48247299-48247318 | Msa0074070:intron | 40.0% | |
| ! | AGATGTTAACACTCTGAAGG+TGG | + | chr1_2:48247353-48247372 | Msa0074070:intron | 40.0% |
| TTTGCGACTATATGGTTGTC+GGG | - | chr1_2:48247553-48247572 | None:intergenic | 40.0% | |
| TAGATCAACGTGGGAATAAG+TGG | - | chr1_2:48247919-48247938 | None:intergenic | 40.0% | |
| TATTCCCACGTTGATCTACA+TGG | + | chr1_2:48247921-48247940 | Msa0074070:intron | 40.0% | |
| !! | TGGTGAGAAGGTCATTTTCA+AGG | - | chr1_2:48248104-48248123 | None:intergenic | 40.0% |
| AAGACAGTTAGCAAAGCCTT+TGG | - | chr1_2:48248181-48248200 | None:intergenic | 40.0% | |
| CATTGATAGAGGGCCAATAA+TGG | - | chr1_2:48248220-48248239 | None:intergenic | 40.0% | |
| GATCCTGGTATTGTTAACGA+GGG | - | chr1_2:48248384-48248403 | None:intergenic | 40.0% | |
| AACAAGCCTTGAGGATAGAT+AGG | + | chr1_2:48248457-48248476 | Msa0074070:intron | 40.0% | |
| ACTGAACCTATCTATCCTCA+AGG | - | chr1_2:48248466-48248485 | None:intergenic | 40.0% | |
| GCACTATGTTGATACCCTTA+AGG | + | chr1_2:48248725-48248744 | Msa0074070:intron | 40.0% | |
| !! | TGAATTGATTTTTGGAGGGG+AGG | + | chr1_2:48248808-48248827 | Msa0074070:intron | 40.0% |
| !! | GAATTGATTTTTGGAGGGGA+GGG | + | chr1_2:48248809-48248828 | Msa0074070:intron | 40.0% |
| !! | AATTGATTTTTGGAGGGGAG+GGG | + | chr1_2:48248810-48248829 | Msa0074070:intron | 40.0% |
| ! | GATGTATTTGCGAGTTGACA+TGG | - | chr1_2:48248895-48248914 | None:intergenic | 40.0% |
| CAACTCGCAAATACATCCTA+AGG | + | chr1_2:48248898-48248917 | Msa0074070:intron | 40.0% | |
| TCAAGGTTGAGAAGATCCTT+AGG | - | chr1_2:48248917-48248936 | None:intergenic | 40.0% | |
| GTAAGGAAGTCTGTCATTCA+AGG | - | chr1_2:48248934-48248953 | None:intergenic | 40.0% | |
| GAGGCAAAAGAGCAAAAACA+AGG | - | chr1_2:48249000-48249019 | None:intergenic | 40.0% | |
| ACTAAGTGAACTAAGCTTGC+AGG | + | chr1_2:48249113-48249132 | Msa0074070:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+TGG | - | chr1_2:48249207-48249226 | None:intergenic | 40.0% |
| ! | CACAAAGAGAGAAGTATGAG+GGG | - | chr1_2:48249849-48249868 | None:intergenic | 40.0% |
| ! | CCACAAAGAGAGAAGTATGA+GGG | - | chr1_2:48249850-48249869 | None:intergenic | 40.0% |
| ! | ACCACAAAGAGAGAAGTATG+AGG | - | chr1_2:48249851-48249870 | None:intergenic | 40.0% |
| TTGAGTAGGGACTAATACTC+AGG | + | chr1_2:48250312-48250331 | Msa0074070:intron | 40.0% | |
| TGAGTAGGGACTAATACTCA+GGG | + | chr1_2:48250313-48250332 | Msa0074070:intron | 40.0% | |
| ! | CACAAAGAGAGAAGTATGAG+GGG | - | chr1_2:48249849-48249868 | None:intergenic | 40.0% |
| ! | CCACAAAGAGAGAAGTATGA+GGG | - | chr1_2:48249850-48249869 | None:intergenic | 40.0% |
| ! | ACCACAAAGAGAGAAGTATG+AGG | - | chr1_2:48249851-48249870 | None:intergenic | 40.0% |
| TCATACTTCTCTCTTTGTGG+TGG | + | chr1_2:48249850-48249869 | Msa0074070:intron | 40.0% | |
| CAGTGTATACTGTGCTACAT+GGG | + | chr1_2:48250816-48250835 | Msa0074070:CDS | 40.0% | |
| ! | TACTTTTGACGCCATGACAA+GGG | - | chr1_2:48250853-48250872 | None:intergenic | 40.0% |
| ! | ATACTTTTGACGCCATGACA+AGG | - | chr1_2:48250854-48250873 | None:intergenic | 40.0% |
| TTGTCATGGCGTCAAAAGTA+TGG | + | chr1_2:48250853-48250872 | Msa0074070:CDS | 40.0% | |
| CTAGCTTCTACTCCACATAT+TGG | + | chr1_2:48251390-48251409 | Msa0074070:intron | 40.0% | |
| TGTAAAGACAGCCCAATATG+TGG | - | chr1_2:48251405-48251424 | None:intergenic | 40.0% | |
| AATAGACAAGGTTACCAGCA+GGG | + | chr1_2:48251806-48251825 | Msa0074070:CDS | 40.0% | |
| GATGAAATGGTGGTCGAAGA+TGG | + | chr1_2:48242137-48242156 | Msa0074070:CDS | 45.0% | |
| !! | GTTGGTGGTGATTGAAGTAG+TGG | + | chr1_2:48242171-48242190 | Msa0074070:intron | 45.0% |
| !! | GTGGTTGATGGTTGGAAGAT+TGG | + | chr1_2:48242190-48242209 | Msa0074070:intron | 45.0% |
| AGAATGGTTGAAGTAGCGGT+TGG | + | chr1_2:48242273-48242292 | Msa0074070:intron | 45.0% | |
| GGTTAAATTGCGGCCAATCA+AGG | + | chr1_2:48242312-48242331 | Msa0074070:intron | 45.0% | |
| CTAGTGTACATAGGTACGGT+TGG | - | chr1_2:48242369-48242388 | None:intergenic | 45.0% | |
| TGAGACTTTGTGGGCAGAAT+TGG | + | chr1_2:48242557-48242576 | Msa0074070:intron | 45.0% | |
| !!! | CTCTGGCTCTTTTCTTCTCT+TGG | - | chr1_2:48242685-48242704 | None:intergenic | 45.0% |
| GAAAAGAGCCAGAGAAGAGA+AGG | + | chr1_2:48242691-48242710 | Msa0074070:intron | 45.0% | |
| TGTTGTCACTAAGACCTCCT+TGG | - | chr1_2:48243441-48243460 | None:intergenic | 45.0% | |
| GCCCTCAACTTATAGAGCAT+AGG | - | chr1_2:48243829-48243848 | None:intergenic | 45.0% | |
| CTATGCATGTGGTACCAATC+AGG | - | chr1_2:48243859-48243878 | None:intergenic | 45.0% | |
| ! | TGTCGTTCATGTCGAGTTGT+CGG | + | chr1_2:48243912-48243931 | Msa0074070:intron | 45.0% |
| GTTTGAATGTTGCCTCTACG+TGG | + | chr1_2:48244229-48244248 | Msa0074070:intron | 45.0% | |
| TCCGAAAGTCTAGCCGAAAA+AGG | - | chr1_2:48244844-48244863 | None:intergenic | 45.0% | |
| TATGTGAGTGCATGTCTCAC+AGG | - | chr1_2:48245159-48245178 | None:intergenic | 45.0% | |
| ACACTATGAAGGAACGTCTC+TGG | + | chr1_2:48247067-48247086 | Msa0074070:intron | 45.0% | |
| TATGAAGGAACGTCTCTGGA+AGG | + | chr1_2:48247071-48247090 | Msa0074070:intron | 45.0% | |
| !! | CAGTTTTAGCATCCAACGAG+TGG | - | chr1_2:48247232-48247251 | None:intergenic | 45.0% |
| ! | AACACTCTGAAGGTGGAACA+CGG | + | chr1_2:48247360-48247379 | Msa0074070:intron | 45.0% |
| TTGCGACTATATGGTTGTCG+GGG | - | chr1_2:48247552-48247571 | None:intergenic | 45.0% | |
| GAGTTGGAGTTGTCAGAAGT+AGG | - | chr1_2:48247797-48247816 | None:intergenic | 45.0% | |
| AATAAGTGGTCGTAGGGGAA+TGG | - | chr1_2:48247905-48247924 | None:intergenic | 45.0% | |
| GAGACCATGTAGATCAACGT+GGG | - | chr1_2:48247928-48247947 | None:intergenic | 45.0% | |
| AGAGACCATGTAGATCAACG+TGG | - | chr1_2:48247929-48247948 | None:intergenic | 45.0% | |
| TGACCTTCTCACCACGTTTA+AGG | + | chr1_2:48248110-48248129 | Msa0074070:intron | 45.0% | |
| GATCCTTAAACGTGGTGAGA+AGG | - | chr1_2:48248116-48248135 | None:intergenic | 45.0% | |
| ! | CAATAATGGTGTCAAGGAGG+GGG | - | chr1_2:48248206-48248225 | None:intergenic | 45.0% |
| ! | CCAATAATGGTGTCAAGGAG+GGG | - | chr1_2:48248207-48248226 | None:intergenic | 45.0% |
| ! | GCCAATAATGGTGTCAAGGA+GGG | - | chr1_2:48248208-48248227 | None:intergenic | 45.0% |
| CTTCCCTCGTTAACAATACC+AGG | + | chr1_2:48248378-48248397 | Msa0074070:intron | 45.0% | |
| GGATCCTGGTATTGTTAACG+AGG | - | chr1_2:48248385-48248404 | None:intergenic | 45.0% | |
| TAGATCGTAAGTAGGGATCC+TGG | - | chr1_2:48248399-48248418 | None:intergenic | 45.0% | |
| CCTCTGAATCCAACCATGAT+GGG | - | chr1_2:48248547-48248566 | None:intergenic | 45.0% | |
| TCTGAGAGATGGCTCCTTAA+GGG | - | chr1_2:48248742-48248761 | None:intergenic | 45.0% | |
| ATCTGAGAGATGGCTCCTTA+AGG | - | chr1_2:48248743-48248762 | None:intergenic | 45.0% | |
| AAGTTCGCACAGAGTCTGTA+AGG | - | chr1_2:48248951-48248970 | None:intergenic | 45.0% | |
| CCCTCATACTTCTCTCTTTG+TGG | + | chr1_2:48249847-48249866 | Msa0074070:intron | 45.0% | |
| CCCTCATACTTCTCTCTTTG+TGG | + | chr1_2:48249847-48249866 | Msa0074070:intron | 45.0% | |
| CCATGTAGCACAGTATACAC+TGG | - | chr1_2:48250818-48250837 | None:intergenic | 45.0% | |
| CCAGTGTATACTGTGCTACA+TGG | + | chr1_2:48250815-48250834 | Msa0074070:CDS | 45.0% | |
| CAGGTGACAAATACTGCAAC+CGG | + | chr1_2:48251698-48251717 | Msa0074070:intron | 45.0% | |
| TCAGGCAACAGTGAGAATAG+TGG | + | chr1_2:48251724-48251743 | Msa0074070:CDS | 45.0% | |
| !! | ATAGTGGACCAATGTGCCAA+TGG | + | chr1_2:48251740-48251759 | Msa0074070:CDS | 45.0% |
| ATCCAAGTCTAACCCACCAT+TGG | - | chr1_2:48251759-48251778 | None:intergenic | 45.0% | |
| CTGCTGGTAACCTTGTCTAT+TGG | - | chr1_2:48251807-48251826 | None:intergenic | 45.0% | |
| CAATAGACAAGGTTACCAGC+AGG | + | chr1_2:48251805-48251824 | Msa0074070:CDS | 45.0% | |
| !! | AATCAAATAAATATAAAATA+GGG | - | chr1_2:48242414-48242433 | None:intergenic | 5.0% |
| !!! | ATTTTATAATATTTATATGT+TGG | + | chr1_2:48244600-48244619 | Msa0074070:intron | 5.0% |
| !!! | TTTTATAATATTTATATGTT+GGG | + | chr1_2:48244601-48244620 | Msa0074070:intron | 5.0% |
| !! | ATTCAAATTAATAAAAAAAA+TGG | + | chr1_2:48245394-48245413 | Msa0074070:intron | 5.0% |
| !!! | TTTTGTATATATATAATATA+GGG | + | chr1_2:48249874-48249893 | Msa0074070:intron | 5.0% |
| AAGATGGACAGAGTGGTGGT+TGG | + | chr1_2:48242153-48242172 | Msa0074070:CDS | 50.0% | |
| ! | GTTGAAGTAGCGGTTGGTTG+TGG | + | chr1_2:48242279-48242298 | Msa0074070:intron | 50.0% |
| GGCCACCGAATTGCCAAAAT+CGG | + | chr1_2:48243195-48243214 | Msa0074070:intron | 50.0% | |
| !!! | TCGGTCACCGATTTTCTGTC+AGG | + | chr1_2:48243262-48243281 | Msa0074070:intron | 50.0% |
| TAGAGCATAGGCTCTCAACG+TGG | - | chr1_2:48243817-48243836 | None:intergenic | 50.0% | |
| TGGGTAACGTGCAGATAACC+AGG | + | chr1_2:48244249-48244268 | Msa0074070:intron | 50.0% | |
| AGGGTCGCTCTGATACGTAA+CGG | + | chr1_2:48244313-48244332 | Msa0074070:intron | 50.0% | |
| ! | CTCTGATACGTAACGGGATG+AGG | + | chr1_2:48244320-48244339 | Msa0074070:intron | 50.0% |
| ! | GTAAGCTGCAAATGGGCTTG+CGG | + | chr1_2:48244667-48244686 | Msa0074070:intron | 50.0% |
| TCATACCTGACCTAAGGGGT+AGG | - | chr1_2:48245116-48245135 | None:intergenic | 50.0% | |
| AACGAGTGGCAGCGAAACAA+TGG | - | chr1_2:48247218-48247237 | None:intergenic | 50.0% | |
| ATTGTTTCGCTGCCACTCGT+TGG | + | chr1_2:48247217-48247236 | Msa0074070:intron | 50.0% | |
| AGTGGATCTTACCCTCCTAG+TGG | + | chr1_2:48247407-48247426 | Msa0074070:intron | 50.0% | |
| ACTATATGGTTGTCGGGGTG+GGG | - | chr1_2:48247547-48247566 | None:intergenic | 50.0% | |
| GACTATATGGTTGTCGGGGT+GGG | - | chr1_2:48247548-48247567 | None:intergenic | 50.0% | |
| !! | TGAACGTGGGAGTACCATGT+CGG | - | chr1_2:48247610-48247629 | None:intergenic | 50.0% |
| GGTCTCAGCCATGTTTGACA+TGG | - | chr1_2:48247752-48247771 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+GGG | - | chr1_2:48247863-48247882 | None:intergenic | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+GGG | - | chr1_2:48247864-48247883 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | - | chr1_2:48247863-48247882 | None:intergenic | 50.0% | |
| GTGGGAATAAGTGGTCGTAG+GGG | - | chr1_2:48247910-48247929 | None:intergenic | 50.0% | |
| CGTGGGAATAAGTGGTCGTA+GGG | - | chr1_2:48247911-48247930 | None:intergenic | 50.0% | |
| ACGTGGGAATAAGTGGTCGT+AGG | - | chr1_2:48247912-48247931 | None:intergenic | 50.0% | |
| CCCCTCCTTGACACCATTAT+TGG | + | chr1_2:48248204-48248223 | Msa0074070:intron | 50.0% | |
| ! | GGCCAATAATGGTGTCAAGG+AGG | - | chr1_2:48248209-48248228 | None:intergenic | 50.0% |
| ! | GAGGGCCAATAATGGTGTCA+AGG | - | chr1_2:48248212-48248231 | None:intergenic | 50.0% |
| CCCATCATGGTTGGATTCAG+AGG | + | chr1_2:48248544-48248563 | Msa0074070:intron | 50.0% | |
| GCCTCTGAATCCAACCATGA+TGG | - | chr1_2:48248548-48248567 | None:intergenic | 50.0% | |
| TGTCAGACGAGTCTACGTTG+TGG | - | chr1_2:48248614-48248633 | None:intergenic | 50.0% | |
| !! | ATTTTTGGAGGGGAGGGGTT+TGG | + | chr1_2:48248815-48248834 | Msa0074070:intron | 50.0% |
| ACCCACATATAGCTCCCTGT+GGG | - | chr1_2:48250783-48250802 | None:intergenic | 50.0% | |
| CACAGTATACACTGGCAGCA+GGG | - | chr1_2:48250810-48250829 | None:intergenic | 50.0% | |
| ! | CATGGCGTCAAAAGTATGGC+TGG | + | chr1_2:48250857-48250876 | Msa0074070:CDS | 50.0% |
| ! | TATGGCTGGACTGCCTTTTG+TGG | + | chr1_2:48250871-48250890 | Msa0074070:CDS | 50.0% |
| AAATACTGCAACCGGAGCTC+AGG | + | chr1_2:48251706-48251725 | Msa0074070:CDS | 50.0% | |
| TGGACCAATGTGCCAATGGT+GGG | + | chr1_2:48251744-48251763 | Msa0074070:CDS | 50.0% | |
| CTAACCCACCATTGGCACAT+TGG | - | chr1_2:48251751-48251770 | None:intergenic | 50.0% | |
| !! | TGCCAATGGTGGGTTAGACT+TGG | + | chr1_2:48251754-48251773 | Msa0074070:CDS | 50.0% |
| TTACCAGCAGGGTCACCTTA+CGG | + | chr1_2:48251817-48251836 | Msa0074070:CDS | 50.0% | |
| GTGGTCGAAGATGGACAGAG+TGG | + | chr1_2:48242146-48242165 | Msa0074070:CDS | 55.0% | |
| GTCGAAGATGGACAGAGTGG+TGG | + | chr1_2:48242149-48242168 | Msa0074070:CDS | 55.0% | |
| ATGGACAGAGTGGTGGTTGG+TGG | + | chr1_2:48242156-48242175 | Msa0074070:CDS | 55.0% | |
| GTTGGTTGTGGTCGAAGTGG+TGG | + | chr1_2:48242291-48242310 | Msa0074070:intron | 55.0% | |
| AATTGCGGCCAATCAAGGCC+AGG | + | chr1_2:48242317-48242336 | Msa0074070:intron | 55.0% | |
| ACTGCCGTGAAGCCCGAAAT+CGG | + | chr1_2:48243174-48243193 | Msa0074070:intron | 55.0% | |
| ! | GCAATTCGGTGGCCGATTTC+GGG | - | chr1_2:48243189-48243208 | None:intergenic | 55.0% |
| ! | GGCAATTCGGTGGCCGATTT+CGG | - | chr1_2:48243190-48243209 | None:intergenic | 55.0% |
| !! | GGCCGATTTTGGCAATTCGG+TGG | - | chr1_2:48243200-48243219 | None:intergenic | 55.0% |
| !! | GGGGGCCGATTTTGGCAATT+CGG | - | chr1_2:48243203-48243222 | None:intergenic | 55.0% |
| !! | CAGAAATCGGGGGCCGATTT+TGG | - | chr1_2:48243211-48243230 | None:intergenic | 55.0% |
| TGAGGGCTTGATGCCCTGAT+TGG | + | chr1_2:48243842-48243861 | Msa0074070:intron | 55.0% | |
| TCTGCACGTTACCCACGTAG+AGG | - | chr1_2:48244244-48244263 | None:intergenic | 55.0% | |
| ACTCTCTCACGCGTCGTCTT+AGG | + | chr1_2:48244293-48244312 | Msa0074070:intron | 55.0% | |
| CTCTCTCACGCGTCGTCTTA+GGG | + | chr1_2:48244294-48244313 | Msa0074070:intron | 55.0% | |
| GGGTCGCTCTGATACGTAAC+GGG | + | chr1_2:48244314-48244333 | Msa0074070:intron | 55.0% | |
| CAGCAAAGCAGCATCTGCGT+TGG | - | chr1_2:48245092-48245111 | None:intergenic | 55.0% | |
| !! | CAACGCAGATGCTGCTTTGC+TGG | + | chr1_2:48245090-48245109 | Msa0074070:intron | 55.0% |
| ! | CTCTGAAGGTGGAACACGGA+AGG | + | chr1_2:48247364-48247383 | Msa0074070:intron | 55.0% |
| CTATATGGTTGTCGGGGTGG+GGG | - | chr1_2:48247546-48247565 | None:intergenic | 55.0% | |
| CGACTATATGGTTGTCGGGG+TGG | - | chr1_2:48247549-48247568 | None:intergenic | 55.0% | |
| ATATCTTGCGCACCCCGACA+TGG | + | chr1_2:48247593-48247612 | Msa0074070:intron | 55.0% | |
| !! | AACGTGGGAGTACCATGTCG+GGG | - | chr1_2:48247608-48247627 | None:intergenic | 55.0% |
| !! | GAACGTGGGAGTACCATGTC+GGG | - | chr1_2:48247609-48247628 | None:intergenic | 55.0% |
| TGTGTGTGTGTGTGTGTGGG+GGG | - | chr1_2:48247861-48247880 | None:intergenic | 55.0% | |
| GTGTGTGTGTGTGTGTGTGG+GGG | - | chr1_2:48247862-48247881 | None:intergenic | 55.0% | |
| ACAACACTGCCAGTCAGGGA+CGG | + | chr1_2:48249459-48249478 | Msa0074070:intron | 55.0% | |
| TGCAAATGTAGTGAGGGCCC+AGG | + | chr1_2:48250757-48250776 | Msa0074070:intron | 55.0% | |
| ATATAGCTCCCTGTGGGCCT+GGG | - | chr1_2:48250777-48250796 | None:intergenic | 55.0% | |
| GCCCACAGGGAGCTATATGT+GGG | + | chr1_2:48250779-48250798 | Msa0074070:CDS | 55.0% | |
| GACCCACATATAGCTCCCTG+TGG | - | chr1_2:48250784-48250803 | None:intergenic | 55.0% | |
| GTATACACTGGCAGCAGGGA+CGG | - | chr1_2:48250806-48250825 | None:intergenic | 55.0% | |
| GCACAGTATACACTGGCAGC+AGG | - | chr1_2:48250811-48250830 | None:intergenic | 55.0% | |
| ATGCCAACCAGCCCTTGTCA+TGG | + | chr1_2:48250839-48250858 | Msa0074070:CDS | 55.0% | |
| TTTGACGCCATGACAAGGGC+TGG | - | chr1_2:48250849-48250868 | None:intergenic | 55.0% | |
| ! | ACTGCCTTTTGTGGACCCCA+GGG | + | chr1_2:48250880-48250899 | Msa0074070:CDS | 55.0% |
| ACTCTTGCGGCAAGTGCTTG+AGG | + | chr1_2:48250917-48250936 | Msa0074070:CDS | 55.0% | |
| CTCTTGCGGCAAGTGCTTGA+GGG | + | chr1_2:48250918-48250937 | Msa0074070:CDS | 55.0% | |
| TCTCACTGTTGCCTGAGCTC+CGG | - | chr1_2:48251720-48251739 | None:intergenic | 55.0% | |
| GTGGACCAATGTGCCAATGG+TGG | + | chr1_2:48251743-48251762 | Msa0074070:CDS | 55.0% | |
| TAACCGTAAGGTGACCCTGC+TGG | - | chr1_2:48251823-48251842 | None:intergenic | 55.0% | |
| ! | GCGGTTGGTTGTGGTCGAAG+TGG | + | chr1_2:48242288-48242307 | Msa0074070:intron | 60.0% |
| !! | GATGCGCTCCTGGCCTTGAT+TGG | - | chr1_2:48242328-48242347 | None:intergenic | 60.0% |
| !! | GGTTGGTTCGTCCCTTCTGC+CGG | - | chr1_2:48242352-48242371 | None:intergenic | 60.0% |
| ! | GTGGCCGATTTCGGGCTTCA+CGG | - | chr1_2:48243181-48243200 | None:intergenic | 60.0% |
| ! | GCTTTGCTGGCCTACCCCTT+AGG | + | chr1_2:48245103-48245122 | Msa0074070:intron | 60.0% |
| TGTGTGTGTGTGTGTGGGGG+GGG | - | chr1_2:48247859-48247878 | None:intergenic | 60.0% | |
| GTGTGTGTGTGTGTGTGGGG+GGG | - | chr1_2:48247860-48247879 | None:intergenic | 60.0% | |
| AGGTATGGGGTTCGAACCCC+AGG | - | chr1_2:48249070-48249089 | None:intergenic | 60.0% | |
| CATATAGCTCCCTGTGGGCC+TGG | - | chr1_2:48250778-48250797 | None:intergenic | 60.0% | |
| GGCCCACAGGGAGCTATATG+TGG | + | chr1_2:48250778-48250797 | Msa0074070:CDS | 60.0% | |
| ! | ACGCCATGACAAGGGCTGGT+TGG | - | chr1_2:48250845-48250864 | None:intergenic | 60.0% |
| ! | GACTGCCTTTTGTGGACCCC+AGG | + | chr1_2:48250879-48250898 | Msa0074070:CDS | 60.0% |
| AGGACCCTGGGGTCCACAAA+AGG | - | chr1_2:48250887-48250906 | None:intergenic | 60.0% | |
| CCTCGCGGTAGAGACTCTTG+CGG | + | chr1_2:48250904-48250923 | Msa0074070:CDS | 60.0% | |
| ! | GCTGGCCTACCCCTTAGGTC+AGG | + | chr1_2:48245108-48245127 | Msa0074070:intron | 65.0% |
| TGTGTGTGTGTGTGGGGGGG+GGG | - | chr1_2:48247857-48247876 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGTGGGGGG+GGG | - | chr1_2:48247858-48247877 | None:intergenic | 65.0% | |
| ATCCTGGGTCCGTCCCTGAC+TGG | - | chr1_2:48249471-48249490 | None:intergenic | 65.0% | |
| TCTCTACCGCGAGGACCCTG+GGG | - | chr1_2:48250898-48250917 | None:intergenic | 65.0% | |
| GTCTCTACCGCGAGGACCCT+GGG | - | chr1_2:48250899-48250918 | None:intergenic | 65.0% | |
| AGTCTCTACCGCGAGGACCC+TGG | - | chr1_2:48250900-48250919 | None:intergenic | 65.0% | |
| CCGCAAGAGTCTCTACCGCG+AGG | - | chr1_2:48250907-48250926 | None:intergenic | 65.0% | |
| ! | CAAGGCCAGGAGCGCATCGC+CGG | + | chr1_2:48242330-48242349 | Msa0074070:intron | 70.0% |
| TTCTGCCGGCGATGCGCTCC+TGG | - | chr1_2:48242338-48242357 | None:intergenic | 70.0% | |
| ! | AGGAGCGCATCGCCGGCAGA+AGG | + | chr1_2:48242337-48242356 | Msa0074070:intron | 70.0% |
| GGAGCGCATCGCCGGCAGAA+GGG | + | chr1_2:48242338-48242357 | Msa0074070:intron | 70.0% | |
| TGTGTGTGTGTGGGGGGGGG+GGG | - | chr1_2:48247855-48247874 | None:intergenic | 70.0% | |
| GTGTGTGTGTGTGGGGGGGG+GGG | - | chr1_2:48247856-48247875 | None:intergenic | 70.0% | |
| TGCCAGTCAGGGACGGACCC+AGG | + | chr1_2:48249466-48249485 | Msa0074070:intron | 70.0% | |
| TAGTGAGGGCCCAGGCCCAC+AGG | + | chr1_2:48250765-48250784 | Msa0074070:intron | 70.0% | |
| AGTGAGGGCCCAGGCCCACA+GGG | + | chr1_2:48250766-48250785 | Msa0074070:intron | 70.0% | |
| TGTGGACCCCAGGGTCCTCG+CGG | + | chr1_2:48250889-48250908 | Msa0074070:CDS | 70.0% | |
| TGTGTGTGTGGGGGGGGGGG+GGG | - | chr1_2:48247853-48247872 | None:intergenic | 75.0% | |
| GTGTGTGTGTGGGGGGGGGG+GGG | - | chr1_2:48247854-48247873 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 48242134 | 48251865 | 48242134 | ID=Msa0074070;Name=Msa0074070 |
| chr1_2 | mRNA | 48242134 | 48251865 | 48242134 | ID=Msa0074070-mRNA-1;Parent=Msa0074070;Name=Msa0074070-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.66|1|1|3|0|126 |
| chr1_2 | exon | 48242134 | 48242177 | 48242134 | ID=Msa0074070-mRNA-1:exon:14654;Parent=Msa0074070-mRNA-1 |
| chr1_2 | exon | 48250768 | 48250939 | 48250768 | ID=Msa0074070-mRNA-1:exon:14655;Parent=Msa0074070-mRNA-1 |
| chr1_2 | exon | 48251701 | 48251865 | 48251701 | ID=Msa0074070-mRNA-1:exon:14656;Parent=Msa0074070-mRNA-1 |
| chr1_2 | CDS | 48242134 | 48242177 | 48242134 | ID=Msa0074070-mRNA-1:cds;Parent=Msa0074070-mRNA-1 |
| chr1_2 | CDS | 48250768 | 48250939 | 48250768 | ID=Msa0074070-mRNA-1:cds;Parent=Msa0074070-mRNA-1 |
| chr1_2 | CDS | 48251701 | 48251865 | 48251701 | ID=Msa0074070-mRNA-1:cds;Parent=Msa0074070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
