AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0074500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074500 MtrunA17_Chr1g0182321 100.000 216 0 0 1 216 1 216 1.95e-162 446
Msa0074500 MtrunA17_Chr1g0182301 99.537 216 1 0 1 216 1 216 9.66e-162 445
Msa0074500 MtrunA17_Chr1g0212521 92.195 205 16 0 11 215 11 215 4.95e-142 395
Msa0074500 MtrunA17_Chr7g0263071 95.146 206 10 0 11 216 11 216 1.62e-140 391
Msa0074500 MtrunA17_Chr4g0030911 91.707 205 16 1 11 215 11 214 3.88e-140 390
Msa0074500 MtrunA17_Chr2g0327911 75.926 216 48 3 1 215 1 213 8.66e-116 328
Msa0074500 MtrunA17_Chr7g0250531 61.058 208 70 4 11 216 4 202 1.11e-86 254
Msa0074500 MtrunA17_Chr4g0055651 58.654 208 75 4 11 216 4 202 2.75e-85 251
Msa0074500 MtrunA17_Chr8g0335471 59.809 209 72 4 11 216 4 203 8.80e-84 247
Msa0074500 MtrunA17_Chr2g0276931 54.028 211 85 4 8 215 2 203 2.44e-79 236
Msa0074500 MtrunA17_Chr6g0458081 44.976 209 108 3 12 214 3 210 1.52e-59 186
Msa0074500 MtrunA17_Chr4g0032201 44.495 218 107 5 7 216 4 215 2.40e-59 186
Msa0074500 MtrunA17_Chr2g0290891 45.455 209 107 4 12 214 3 210 6.24e-59 184
Msa0074500 MtrunA17_Chr3g0112681 45.070 213 104 4 10 214 7 214 1.59e-58 183
Msa0074500 MtrunA17_Chr2g0276941 43.128 211 114 2 11 216 11 220 9.41e-58 182
Msa0074500 MtrunA17_Chr2g0283131 45.872 218 105 5 7 216 5 217 2.28e-57 181
Msa0074500 MtrunA17_Chr7g0265001 47.596 208 97 5 12 214 13 213 1.66e-56 178
Msa0074500 MtrunA17_Chr4g0046261 44.037 218 109 5 7 216 5 217 3.58e-56 177
Msa0074500 MtrunA17_Chr1g0189361 42.453 212 111 2 13 214 12 222 7.05e-56 177
Msa0074500 MtrunA17_Chr4g0040781 44.495 218 108 5 7 216 5 217 1.11e-55 176
Msa0074500 MtrunA17_Chr2g0315551 43.925 214 115 2 7 216 5 217 1.66e-55 176
Msa0074500 MtrunA17_Chr1g0180291 48.077 208 95 6 12 214 11 210 2.98e-55 175
Msa0074500 MtrunA17_Chr8g0349711 44.286 210 105 5 14 214 5 211 3.95e-55 175
Msa0074500 MtrunA17_Chr3g0123821 47.059 170 89 1 8 177 9 177 2.76e-54 173
Msa0074500 MtrunA17_Chr8g0381841 42.925 212 112 4 13 216 15 225 2.79e-54 173
Msa0074500 MtrunA17_Chr1g0159481 46.411 209 99 7 11 214 13 213 3.80e-54 172
Msa0074500 MtrunA17_Chr3g0130271 45.455 209 101 6 11 214 8 208 5.71e-54 171
Msa0074500 MtrunA17_Chr7g0234201 43.902 205 109 4 14 214 12 214 1.04e-53 171
Msa0074500 MtrunA17_Chr2g0319951 49.123 171 86 1 7 177 5 174 1.25e-53 171
Msa0074500 MtrunA17_Chr8g0384311 43.868 212 105 7 8 214 6 208 6.88e-53 169
Msa0074500 MtrunA17_Chr8g0349681 43.902 205 111 3 12 214 381 583 1.21e-52 178
Msa0074500 MtrunA17_Chr8g0349681 44.681 188 97 3 12 195 172 356 4.87e-48 166
Msa0074500 MtrunA17_Chr8g0349681 49.045 157 79 1 14 170 12 167 2.74e-46 161
Msa0074500 MtrunA17_Chr1g0197331 44.240 217 112 6 1 214 1 211 4.76e-52 167
Msa0074500 MtrunA17_Chr1g0174281 40.654 214 113 4 13 215 13 223 2.37e-51 165
Msa0074500 MtrunA17_Chr2g0325091 41.981 212 113 3 11 216 7 214 4.56e-51 164
Msa0074500 MtrunA17_Chr8g0346421 46.667 165 87 1 13 177 24 187 5.37e-51 165
Msa0074500 MtrunA17_Chr8g0351861 42.927 205 111 3 13 213 14 216 1.33e-50 164
Msa0074500 MtrunA17_Chr7g0275991 40.594 202 114 2 7 203 12 212 1.77e-50 163
Msa0074500 MtrunA17_Chr6g0482721 41.262 206 116 2 13 214 10 214 1.80e-50 163
Msa0074500 MtrunA17_Chr7g0214241 40.580 207 116 4 14 214 14 219 2.87e-50 162
Msa0074500 MtrunA17_Chr7g0231131 45.455 165 89 1 13 177 13 176 9.29e-48 156
Msa0074500 MtrunA17_Chr8g0392931 43.128 211 106 4 13 214 12 217 6.91e-47 154
Msa0074500 MtrunA17_Chr3g0109721 38.693 199 110 4 17 214 12 199 7.96e-46 150
Msa0074500 MtrunA17_Chr8g0390561 42.697 178 97 2 8 185 2 174 1.02e-45 150
Msa0074500 MtrunA17_Chr1g0199331 44.242 165 90 2 16 179 32 195 5.67e-45 148
Msa0074500 MtrunA17_Chr5g0433561 37.688 199 112 4 17 214 12 199 1.51e-44 147
Msa0074500 MtrunA17_Chr4g0034871 39.901 203 108 7 5 198 2 199 2.19e-41 139
Msa0074500 MtrunA17_Chr8g0382221 38.071 197 113 3 17 205 11 206 4.22e-41 139
Msa0074500 MtrunA17_Chr3g0123971 37.563 197 120 2 17 213 11 204 1.93e-39 134
Msa0074500 MtrunA17_Chr5g0400131 37.143 210 125 4 5 214 3 205 2.47e-39 134
Msa0074500 MtrunA17_Chr4g0055081 39.412 170 98 2 5 174 3 167 3.26e-38 131
Msa0074500 MtrunA17_Chr2g0331691 36.585 205 119 5 15 213 10 209 1.45e-37 130
Msa0074500 MtrunA17_Chr4g0004661 37.379 206 117 5 15 214 64 263 1.89e-36 128
Msa0074500 MtrunA17_Chr6g0466301 37.912 182 107 3 15 190 8 189 2.02e-36 127
Msa0074500 MtrunA17_Chr6g0465491 37.912 182 107 3 15 190 8 189 2.02e-36 127
Msa0074500 MtrunA17_Chr8g0383261 38.922 167 96 2 15 175 12 178 4.74e-36 125
Msa0074500 MtrunA17_Chr1g0201121 35.176 199 121 3 15 205 8 206 5.74e-35 123
Msa0074500 MtrunA17_Chr6g0466161 33.889 180 113 3 32 205 7 186 1.38e-26 101
Msa0074500 MtrunA17_Chr4g0037021 33.511 188 112 6 15 191 6 191 2.71e-26 100
Msa0074500 MtrunA17_Chr2g0325101 33.533 167 98 5 15 170 6 170 3.00e-26 100
Msa0074500 MtrunA17_Chr6g0465471 33.333 180 114 3 32 205 7 186 7.39e-26 99.8
Msa0074500 MtrunA17_Chr1g0178291 40.588 170 90 4 10 179 426 584 3.55e-25 102
Msa0074500 MtrunA17_Chr3g0117931 32.934 167 99 5 15 170 8 172 3.72e-25 97.8
Msa0074500 MtrunA17_Chr3g0138121 29.381 194 128 5 3 192 2 190 1.27e-24 96.7
Msa0074500 MtrunA17_Chr3g0138101 29.381 194 128 5 3 192 2 190 1.28e-24 96.7
Msa0074500 MtrunA17_Chr3g0138111 29.381 194 128 5 3 192 2 190 1.53e-24 96.7
Msa0074500 MtrunA17_Chr8g0371501 32.934 167 99 6 15 170 6 170 8.51e-24 94.0
Msa0074500 MtrunA17_Chr6g0486041 31.737 167 101 5 15 170 6 170 1.07e-23 94.0
Msa0074500 MtrunA17_Chr5g0405791 32.934 167 99 6 15 170 6 170 2.03e-23 92.8
Msa0074500 MtrunA17_Chr4g0046211 35.484 124 77 3 15 137 6 127 9.71e-23 89.7
Msa0074500 MtrunA17_Chr6g0466431 36.842 95 51 1 15 109 8 93 2.87e-17 74.3
Msa0074500 MtrunA17_Chr6g0465611 36.842 95 51 1 15 109 8 93 2.87e-17 74.3
Msa0074500 MtrunA17_Chr5g0443631 26.190 168 114 4 10 170 98 262 5.33e-13 66.6
Msa0074500 MtrunA17_Chr5g0434561 29.878 164 96 6 16 170 20 173 2.15e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074500 AT3G53610.2 90.777 206 19 0 11 216 11 216 9.41e-143 397
Msa0074500 AT3G53610.3 90.777 206 19 0 11 216 11 216 9.41e-143 397
Msa0074500 AT3G53610.1 90.777 206 19 0 11 216 11 216 9.41e-143 397
Msa0074500 AT5G59840.1 91.262 206 18 0 11 216 11 216 4.05e-142 395
Msa0074500 AT3G46060.2 90.291 206 20 0 11 216 11 216 3.47e-141 393
Msa0074500 AT3G46060.3 90.291 206 20 0 11 216 11 216 3.47e-141 393
Msa0074500 AT3G46060.1 90.291 206 20 0 11 216 11 216 3.47e-141 393
Msa0074500 AT5G03520.1 85.514 214 30 1 1 214 1 213 3.23e-129 363
Msa0074500 AT3G09900.1 85.116 215 31 1 1 214 1 215 1.36e-128 362
Msa0074500 AT5G03520.2 83.636 165 26 1 50 214 40 203 1.29e-101 293
Msa0074500 AT1G02130.1 59.809 209 72 4 11 216 4 203 2.82e-87 256
Msa0074500 AT4G17530.1 59.135 208 74 4 11 216 4 202 1.76e-83 247
Msa0074500 AT5G47200.1 59.135 208 74 4 11 216 4 202 4.18e-83 246
Msa0074500 AT3G11730.1 56.667 210 79 4 10 215 3 204 2.45e-80 239
Msa0074500 AT4G35860.1 47.619 210 103 3 12 215 3 211 2.26e-64 198
Msa0074500 AT4G17160.1 47.087 206 104 3 12 215 3 205 4.04e-63 195
Msa0074500 AT4G17170.1 46.667 210 105 4 12 215 3 211 7.28e-62 192
Msa0074500 AT1G09630.1 44.393 214 114 2 7 216 4 216 3.24e-61 191
Msa0074500 AT4G18430.1 44.444 216 107 4 7 214 5 215 8.84e-58 182
Msa0074500 AT1G07410.1 42.523 214 116 3 7 216 4 214 1.12e-57 181
Msa0074500 AT5G59150.1 49.123 171 86 1 7 177 4 173 2.38e-57 181
Msa0074500 AT3G46830.1 42.727 220 110 3 7 216 4 217 4.23e-57 180
Msa0074500 AT3G46830.2 42.727 220 110 3 7 216 4 217 4.23e-57 180
Msa0074500 AT4G39990.1 44.811 212 106 4 13 216 15 223 4.75e-57 180
Msa0074500 AT1G16920.1 50.292 171 84 1 7 177 5 174 5.81e-57 180
Msa0074500 AT3G07410.1 44.928 207 108 3 13 214 10 215 7.53e-57 179
Msa0074500 AT2G43130.1 42.157 204 115 2 13 214 10 212 1.20e-55 176
Msa0074500 AT5G45750.1 43.192 213 113 3 7 214 5 214 2.50e-55 176
Msa0074500 AT5G60860.1 43.119 218 111 4 7 216 5 217 4.48e-55 175
Msa0074500 AT3G15060.1 44.395 223 111 5 1 216 1 217 1.37e-54 174
Msa0074500 AT1G05810.1 42.857 210 112 4 13 216 10 217 1.51e-54 174
Msa0074500 AT4G18800.1 44.076 211 112 3 7 214 5 212 1.59e-54 174
Msa0074500 AT1G05810.2 42.857 210 112 4 13 216 56 263 3.32e-54 174
Msa0074500 AT5G47520.1 42.991 214 108 4 13 216 12 221 4.74e-54 172
Msa0074500 AT1G28550.1 43.779 217 112 4 7 216 5 218 6.33e-54 172
Msa0074500 AT5G65270.1 41.315 213 115 4 13 216 15 226 1.33e-53 172
Msa0074500 AT2G33870.1 42.791 215 117 3 7 216 5 218 1.61e-53 171
Msa0074500 AT1G01200.1 46.328 177 95 0 13 189 26 202 2.11e-53 171
Msa0074500 AT5G47960.1 42.180 211 114 3 13 216 13 222 2.59e-53 171
Msa0074500 AT1G06400.1 47.977 173 89 1 7 179 5 176 7.99e-53 169
Msa0074500 AT2G31680.1 40.000 210 119 2 13 216 10 218 1.41e-52 169
Msa0074500 AT5G03530.2 46.226 212 101 7 8 214 6 209 2.43e-52 168
Msa0074500 AT5G03530.1 46.226 212 101 7 8 214 6 209 2.43e-52 168
Msa0074500 AT1G73640.1 42.793 222 106 3 13 214 11 231 5.72e-52 167
Msa0074500 AT1G43890.3 51.515 165 76 4 8 170 6 168 9.70e-52 166
Msa0074500 AT1G43890.1 51.515 165 76 4 8 170 6 168 9.70e-52 166
Msa0074500 AT1G43890.2 51.515 165 76 4 8 170 6 168 9.70e-52 166
Msa0074500 AT1G18200.1 49.708 171 85 1 13 183 11 180 4.60e-51 165
Msa0074500 AT3G12160.1 47.273 165 86 1 13 177 13 176 1.82e-50 163
Msa0074500 AT3G54840.1 44.382 178 94 3 3 179 24 197 1.13e-47 155
Msa0074500 AT3G54840.2 46.154 169 86 3 3 170 24 188 3.85e-47 154
Msa0074500 AT3G54840.3 45.399 163 87 2 18 179 2 163 2.06e-46 151
Msa0074500 AT4G35860.2 45.455 165 83 3 57 215 2 165 1.48e-44 146
Msa0074500 AT4G19640.1 38.693 199 112 4 17 215 12 200 7.11e-44 146
Msa0074500 AT3G09910.5 45.946 185 96 4 8 190 6 188 7.55e-44 145
Msa0074500 AT3G09910.4 45.946 185 96 4 8 190 6 188 7.55e-44 145
Msa0074500 AT3G09910.3 47.701 174 87 4 8 179 6 177 9.26e-43 143
Msa0074500 AT3G09910.1 47.701 174 87 4 8 179 6 177 9.26e-43 143
Msa0074500 AT3G09910.2 47.701 174 87 4 8 179 6 177 9.26e-43 143
Msa0074500 AT3G18820.1 38.605 215 116 6 5 213 2 206 8.28e-42 141
Msa0074500 AT5G45130.1 36.181 199 117 4 17 215 12 200 1.60e-41 140
Msa0074500 AT2G22290.1 37.879 198 120 2 17 214 11 205 6.42e-41 139
Msa0074500 AT4G39890.1 43.396 159 88 2 17 174 11 168 6.43e-41 139
Msa0074500 AT5G45130.2 35.533 197 117 4 19 215 22 208 8.43e-40 135
Msa0074500 AT5G10260.1 37.186 199 122 2 17 215 11 206 2.24e-39 134
Msa0074500 AT2G44610.1 36.190 210 128 3 5 214 3 206 7.06e-39 133
Msa0074500 AT1G49300.2 36.279 215 121 6 5 213 2 206 1.32e-38 132
Msa0074500 AT1G49300.1 36.279 215 121 6 5 213 2 206 1.32e-38 132
Msa0074500 AT1G52280.1 38.049 205 115 5 15 213 8 206 2.21e-38 132
Msa0074500 AT5G64990.1 37.563 197 122 1 17 213 9 204 3.63e-38 131
Msa0074500 AT1G22740.1 38.071 197 114 4 15 205 8 202 7.58e-38 130
Msa0074500 AT4G09720.1 38.693 199 113 4 15 205 8 205 8.06e-38 130
Msa0074500 AT5G59150.2 48.760 121 61 1 57 177 3 122 8.63e-38 129
Msa0074500 AT3G16100.1 37.379 206 116 4 15 214 8 206 6.80e-37 128
Msa0074500 AT2G21880.1 36.538 208 110 4 15 205 9 211 1.77e-36 127
Msa0074500 AT4G09720.4 38.235 204 112 5 15 205 8 210 4.59e-36 126
Msa0074500 AT5G64990.2 36.275 204 122 2 17 213 9 211 2.09e-35 124
Msa0074500 AT4G09720.3 35.714 210 115 4 15 205 8 216 1.02e-34 123
Msa0074500 AT5G39620.1 38.462 169 92 3 16 175 6 171 6.99e-34 120
Msa0074500 AT4G19640.2 39.669 121 73 0 17 137 12 132 2.68e-30 109
Msa0074500 AT4G19640.3 39.669 121 73 0 17 137 12 132 1.48e-29 109
Msa0074500 AT4G09720.6 38.824 170 95 4 44 205 3 171 7.85e-29 106
Msa0074500 AT4G09720.5 38.824 170 95 4 44 205 3 171 7.85e-29 106
Msa0074500 AT4G09720.2 38.824 170 95 4 44 205 3 171 7.85e-29 106
Msa0074500 AT2G21880.4 36.066 183 95 4 40 205 9 186 1.88e-28 106
Msa0074500 AT2G21880.3 36.066 183 95 4 40 205 9 186 1.88e-28 106
Msa0074500 AT4G35020.1 36.527 167 93 6 15 170 6 170 1.57e-27 103
Msa0074500 AT4G35020.2 36.527 167 93 6 15 170 6 170 1.57e-27 103
Msa0074500 AT4G35020.3 36.527 167 93 6 15 170 6 170 1.57e-27 103
Msa0074500 AT2G21880.2 32.692 208 110 5 15 205 9 203 1.12e-26 102
Msa0074500 AT2G44690.1 33.533 167 98 5 15 170 18 182 1.14e-26 102
Msa0074500 AT3G48040.1 33.533 167 98 5 15 170 8 172 3.07e-26 100
Msa0074500 AT5G45970.1 31.737 167 101 5 15 170 6 170 8.47e-26 99.8
Msa0074500 AT5G62880.1 32.402 179 108 5 15 182 8 184 1.03e-25 99.8
Msa0074500 AT5G55190.1 29.439 214 139 6 3 209 2 210 2.48e-25 99.0
Msa0074500 AT1G20090.1 34.731 167 96 6 15 170 5 169 3.05e-25 98.2
Msa0074500 AT3G51300.1 32.934 167 99 6 15 170 6 170 3.83e-25 97.8
Msa0074500 AT1G75840.1 34.132 167 97 6 15 170 6 170 4.87e-25 97.4
Msa0074500 AT5G55080.1 32.716 162 105 3 16 177 14 171 5.54e-25 98.2
Msa0074500 AT5G20010.1 28.505 214 143 6 3 212 2 209 5.71e-25 97.8
Msa0074500 AT2G17800.2 33.533 167 98 6 15 170 6 170 1.82e-24 95.9
Msa0074500 AT2G17800.1 33.533 167 98 6 15 170 6 170 1.82e-24 95.9
Msa0074500 AT5G20020.1 29.381 194 128 5 3 192 2 190 3.30e-24 95.9
Msa0074500 AT4G28950.1 32.121 165 101 5 15 170 6 168 4.20e-24 95.5
Msa0074500 AT4G35950.1 32.934 167 99 6 15 170 6 170 1.48e-23 93.6
Msa0074500 AT3G48040.2 32.704 159 94 5 15 162 8 164 2.19e-23 92.8
Msa0074500 AT5G62880.2 32.317 164 98 5 15 167 8 169 1.95e-22 90.5
Msa0074500 AT4G35020.4 37.069 116 70 3 15 129 6 119 3.29e-19 80.9
Msa0074500 AT4G35020.5 37.069 116 70 3 15 129 6 119 3.29e-19 80.9
Msa0074500 AT5G46025.1 35.294 102 64 2 77 177 6 106 8.69e-16 70.9
Msa0074500 AT3G51290.2 31.469 143 85 6 44 175 636 776 6.43e-13 67.8
Msa0074500 AT5G37680.1 27.439 164 100 5 16 170 20 173 1.36e-11 61.6
Msa0074500 AT2G15310.1 27.338 139 89 6 16 153 18 145 3.25e-11 60.8
Msa0074500 AT5G67560.1 31.098 164 94 6 16 170 20 173 5.45e-11 59.7
Msa0074500 AT3G49870.2 28.571 168 113 4 16 180 1 164 5.84e-11 59.3

Find 76 sgRNAs with CRISPR-Local

Find 541 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATCACATATCTATTTAT+TGG 0.174895 1_2:-49093624 Msa0074500:three_prime_UTR
AGCGAATTAAATTGCAAATA+TGG 0.181370 1_2:-49098159 Msa0074500:CDS
CATCGTGGATCAATCATATT+AGG 0.248360 1_2:-49100570 Msa0074500:five_prime_UTR
TGCTACTTATTGGGTGTTAA+TGG 0.249211 1_2:-49093675 Msa0074500:three_prime_UTR
TTAGCATTGATTTCAAAATA+AGG 0.283837 1_2:-49098201 Msa0074500:intron
GTTGGTTAATCTTGAGTGTT+TGG 0.305709 1_2:+49093848 None:intergenic
GTCGAGATCTGAAAAGAAAA+TGG 0.305874 1_2:+49100752 None:intergenic
TTTGAGCGAGGAAGTTAATT+TGG 0.306851 1_2:-49093746 Msa0074500:three_prime_UTR
TTTATACATTTGACGTTTCT+CGG 0.319154 1_2:-49093462 Msa0074500:three_prime_UTR
TACGAAGCTTAGCAATATAT+TGG 0.323958 1_2:+49093496 None:intergenic
TTGGTTAATCTTGAGTGTTT+GGG 0.325251 1_2:+49093849 None:intergenic
CATCTGAGAAACGCAGTAAA+AGG 0.343014 1_2:+49098369 None:intergenic
CCCAATGGTTGTAATAAAAC+TGG 0.357327 1_2:+49098334 None:intergenic
TAATCGGATCGAGCTCTTGC+AGG 0.360612 1_2:+49100519 None:intergenic
GCAGAGCCAGCTCCCTGGTC+TGG 0.400030 1_2:+49093826 None:intergenic
GCGAATTAAATTGCAAATAT+GGG 0.404268 1_2:-49098158 Msa0074500:CDS
GACTAGATCCTTCCTATGTT+GGG 0.407640 1_2:-49093650 Msa0074500:three_prime_UTR
CTTGATTAAGTAATCGTAAT+CGG 0.413518 1_2:+49100503 None:intergenic
AAAAGAAAATGGAGATTGAT+TGG 0.415782 1_2:+49100763 None:intergenic
AGCAAACATTGTGTATAGTC+AGG 0.416706 1_2:+49093552 None:intergenic
AACAACATCCTTCGCCTACT+TGG 0.417142 1_2:-49093523 Msa0074500:three_prime_UTR
CATATCCAGACATCAAGAAT+TGG 0.417945 1_2:-49094512 Msa0074500:intron
CGGTTTCGAACCATTACAAC+TGG 0.420732 1_2:-49098118 Msa0074500:intron
ACGATGGTTGCTATAGTAGA+AGG 0.431056 1_2:+49100587 None:intergenic
TCGCTTACCATCAAGCTCTA+TGG 0.436931 1_2:+49098177 None:intergenic
TTGCTATAGTAGAAGGAGAT+AGG 0.439386 1_2:+49100594 None:intergenic
AGACTAGATCCTTCCTATGT+TGG 0.447576 1_2:-49093651 Msa0074500:three_prime_UTR
CTGACATGGATGAAAGCAAA+AGG 0.447905 1_2:-49094428 Msa0074500:CDS
GAAGTGAATGAAAATGAAAA+TGG 0.450221 1_2:+49100715 None:intergenic
AACTTCAAAGGGTCAAGCTC+TGG 0.455648 1_2:-49094291 Msa0074500:CDS
GCTTATTACCGTGGAGCAAT+GGG 0.460469 1_2:-49094799 Msa0074500:CDS
TTGGATGAAGAGTTTGTTGT+TGG 0.475696 1_2:+49100782 None:intergenic
TGGAAAGAAAGAGTGGAGAG+TGG 0.477663 1_2:+49100669 None:intergenic
GGAAAGAAAGAGTGGAGAGT+GGG 0.481492 1_2:+49100670 None:intergenic
AGCCAGCTCCCTGGTCTGGT+TGG 0.481793 1_2:+49093830 None:intergenic
CAATGTCAACAAAATATTAG+TGG 0.483464 1_2:-49094460 Msa0074500:CDS
ATAAGGACCATAGAGCTTGA+TGG 0.484066 1_2:-49098184 Msa0074500:CDS
AATGTCAACAAAATATTAGT+GGG 0.485156 1_2:-49094459 Msa0074500:CDS
AGAGCTTGACCCTTTGAAGT+TGG 0.487525 1_2:+49094293 None:intergenic
AGCTTATTACCGTGGAGCAA+TGG 0.491934 1_2:-49094800 Msa0074500:CDS
CAAGCTCTGGCAGACGAATA+CGG 0.492705 1_2:-49094278 Msa0074500:CDS
TTAGGCTGTTCCAACTTCAA+AGG 0.500392 1_2:-49094303 Msa0074500:intron
CTGAAACTAACCAGTTGTAA+TGG 0.502216 1_2:+49098108 None:intergenic
TAGGCTGTTCCAACTTCAAA+GGG 0.502333 1_2:-49094302 Msa0074500:CDS
ATTAATTTCCCAACATAGGA+AGG 0.502549 1_2:+49093642 None:intergenic
CAAGATTAACCAACCAGACC+AGG 0.511143 1_2:-49093839 Msa0074500:CDS
CAAAATATTAGTGGGGAACA+AGG 0.513217 1_2:-49094451 Msa0074500:CDS
TGTGATTAATTTCCCAACAT+AGG 0.513404 1_2:+49093638 None:intergenic
AACTAATATGAATGTGGAGG+AGG 0.516237 1_2:-49094141 Msa0074500:CDS
CTTGAGCAGAGCCAGCTCCC+TGG 0.516656 1_2:+49093821 None:intergenic
AACCAACCAGACCAGGGAGC+TGG 0.539659 1_2:-49093832 Msa0074500:CDS
TTAATCAAGCTTCTCCTCAT+CGG 0.547013 1_2:-49100489 Msa0074500:CDS
GAAAGAAAGAGTGGAGAGTG+GGG 0.557172 1_2:+49100671 None:intergenic
AATATATTGGAGCACCAAGT+AGG 0.564792 1_2:+49093509 None:intergenic
AGTGGGGAACAAGGCTGACA+TGG 0.573301 1_2:-49094442 Msa0074500:CDS
TTGCAAATATGGGACACGGC+TGG 0.578666 1_2:-49098148 Msa0074500:CDS
TGGTTAATCTTGAGTGTTTG+GGG 0.580908 1_2:+49093850 None:intergenic
TGACATGGATGAAAGCAAAA+GGG 0.589594 1_2:-49094427 Msa0074500:intron
TCACAAACGTCTTCTTGCTG+TGG 0.593063 1_2:-49093796 Msa0074500:CDS
GTGAATGAAAATGAAAATGG+TGG 0.593989 1_2:+49100718 None:intergenic
CTTCTCCTCATCGGTGATAG+CGG 0.601359 1_2:-49100480 Msa0074500:intron
TGTTGGGCAGCTTATTACCG+TGG 0.603610 1_2:-49094808 Msa0074500:intron
ACTGTTAAAAGACGACTCAT+CGG 0.609470 1_2:+49094753 None:intergenic
TCGGATCGAGCTCTTGCAGG+TGG 0.611640 1_2:+49100522 None:intergenic
GCAAAATACCCATTGCTCCA+CGG 0.620774 1_2:+49094791 None:intergenic
TTGGAGCACCAAGTAGGCGA+AGG 0.626763 1_2:+49093515 None:intergenic
TAAATTGCAAATATGGGACA+CGG 0.645303 1_2:-49098152 Msa0074500:CDS
AAGATTAACCAACCAGACCA+GGG 0.666777 1_2:-49093838 Msa0074500:CDS
CTTGCAACTACATTTGAGCG+AGG 0.672775 1_2:-49093758 Msa0074500:three_prime_UTR
GGGACACGGCTGGTCAAGAG+CGG 0.673808 1_2:-49098138 Msa0074500:CDS
ATGTCAACAAAATATTAGTG+GGG 0.680013 1_2:-49094458 Msa0074500:CDS
AGAAAGTGACTCAAAGACTG+AGG 0.684848 1_2:-49094078 Msa0074500:intron
CTAATATGATTGATCCACGA+TGG 0.690061 1_2:+49100571 None:intergenic
TTCTACTATAGCAACCATCG+TGG 0.713720 1_2:-49100585 Msa0074500:five_prime_UTR
ACGAACCGCTATCACCGATG+AGG 0.719307 1_2:+49100475 None:intergenic
AAGTATGAAGAAATGACATG+TGG 0.734021 1_2:+49093366 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAGTTAATTTGATTTTAT+TGG + chr1_2:49093499-49093518 None:intergenic 10.0%
!! TTAATTAAGACAAAATTTAA+GGG + chr1_2:49093527-49093546 None:intergenic 10.0%
!! TTTAATTAAGACAAAATTTA+AGG + chr1_2:49093528-49093547 None:intergenic 10.0%
!! GAACTAATTATTATTTATTA+AGG - chr1_2:49093864-49093883 Msa0074500:intron 10.0%
!! ATACTATTTAATATTTATAG+TGG + chr1_2:49096243-49096262 None:intergenic 10.0%
!!! TCAATATTATTTTTTGATTA+AGG - chr1_2:49096266-49096285 Msa0074500:intron 10.0%
!!! TTTTTTAGCTAAAATAATAA+GGG + chr1_2:49096970-49096989 None:intergenic 10.0%
!!! TTTTTTTAGCTAAAATAATA+AGG + chr1_2:49096971-49096990 None:intergenic 10.0%
!! TAATTAAGACAAAATTTAAG+GGG + chr1_2:49093526-49093545 None:intergenic 15.0%
!!! TTAGGTTTTATTATTTTTAG+CGG - chr1_2:49093750-49093769 Msa0074500:three_prime_UTR 15.0%
!!! AAAATAAATAGTGGAAAAAA+GGG - chr1_2:49094937-49094956 Msa0074500:intron 15.0%
!!! TTTGTTGCTTAAAAAAAAAA+CGG - chr1_2:49095486-49095505 Msa0074500:intron 15.0%
!!! AATAAGTTGAAAACAAATTA+TGG - chr1_2:49095554-49095573 Msa0074500:intron 15.0%
!!! ATAAGTTGAAAACAAATTAT+GGG - chr1_2:49095555-49095574 Msa0074500:intron 15.0%
!!! ACTAATTATTCTAGTTATAT+TGG + chr1_2:49096098-49096117 None:intergenic 15.0%
!!! TTTGAATAAGATTTTAAGAT+TGG - chr1_2:49096350-49096369 Msa0074500:intron 15.0%
!! AAATTTGTGTAAATGAATTT+AGG + chr1_2:49096663-49096682 None:intergenic 15.0%
!!! GTATTTTTATCAGTTTATTT+AGG + chr1_2:49097047-49097066 None:intergenic 15.0%
!!! TTTGGTAATTTTTTATACTT+TGG + chr1_2:49097404-49097423 None:intergenic 15.0%
!! ATAAACATACATCATATAAT+TGG + chr1_2:49097428-49097447 None:intergenic 15.0%
!!! AACATGAATTTATTTTTAGA+AGG + chr1_2:49097896-49097915 None:intergenic 15.0%
!! AAGAATACTAATATTGTATT+AGG - chr1_2:49097937-49097956 Msa0074500:intron 15.0%
!! TTAAATAAATAAAACTGGTT+CGG + chr1_2:49098724-49098743 None:intergenic 15.0%
!!! ACCAGTTTTATTTATTTAAT+TGG - chr1_2:49098725-49098744 Msa0074500:intron 15.0%
!! TCCAATTAAATAAATAAAAC+TGG + chr1_2:49098729-49098748 None:intergenic 15.0%
!! AATATTTGACAGATAAATTA+AGG + chr1_2:49099040-49099059 None:intergenic 15.0%
!!! CTTTTAAAATTTTAAAAAGG+CGG - chr1_2:49099062-49099081 Msa0074500:intron 15.0%
!! TTAATCACATATCTATTTAT+TGG - chr1_2:49100521-49100540 Msa0074500:CDS 15.0%
!!! TTTTTAATTTTGTTCAATAC+AGG - chr1_2:49100742-49100761 Msa0074500:five_prime_UTR 15.0%
!!! ACTTATTTTTGTCAATGAAA+AGG - chr1_2:49093830-49093849 Msa0074500:CDS 20.0%
!!! AACGGTTTTCATATAAAATA+AGG - chr1_2:49094010-49094029 Msa0074500:intron 20.0%
!! TATAAAATAAGGTTGTTTGA+AGG - chr1_2:49094021-49094040 Msa0074500:intron 20.0%
!!! AAAATCAACTTATGACTTTT+TGG - chr1_2:49094576-49094595 Msa0074500:intron 20.0%
!! AAACATTCAATATGAACAAA+TGG + chr1_2:49094903-49094922 None:intergenic 20.0%
!!! CAAAATAAATAGTGGAAAAA+AGG - chr1_2:49094936-49094955 Msa0074500:intron 20.0%
!!! ATAATTTTTGTGAGAACTTA+TGG + chr1_2:49095597-49095616 None:intergenic 20.0%
!!! TTAGCATTGATTTCAAAATA+AGG - chr1_2:49095944-49095963 Msa0074500:intron 20.0%
!!! TTATTCTAGTTATATTGGAA+GGG + chr1_2:49096093-49096112 None:intergenic 20.0%
!!! ATTATTCTAGTTATATTGGA+AGG + chr1_2:49096094-49096113 None:intergenic 20.0%
!! CTTAAAATCTTATTCAAAAC+AGG + chr1_2:49096348-49096367 None:intergenic 20.0%
!! ATCTTAAAAGATCTATTGAT+AGG + chr1_2:49096379-49096398 None:intergenic 20.0%
!! TAGACTTTATCTAAAAATTC+TGG - chr1_2:49096468-49096487 Msa0074500:intron 20.0%
!!! ATTTGTTGTTTCAAAAAAAC+AGG + chr1_2:49096826-49096845 None:intergenic 20.0%
!!! TAGTATTGTTAGTTTTTTGT+CGG - chr1_2:49096848-49096867 Msa0074500:intron 20.0%
!! GATATTCAATCTAACAATTT+CGG + chr1_2:49097069-49097088 None:intergenic 20.0%
!!! GAATATTTTCAAGAATTGAA+AGG - chr1_2:49097338-49097357 Msa0074500:intron 20.0%
!!! GGTTTTTAATAACATTGAAA+AGG - chr1_2:49097359-49097378 Msa0074500:intron 20.0%
!!! ATACATCATATAATTGGTTT+TGG + chr1_2:49097422-49097441 None:intergenic 20.0%
!!! GATTAGAAGTATTTTTTGTA+AGG + chr1_2:49097549-49097568 None:intergenic 20.0%
!!! TGACATTTTGAAAATGATTA+GGG + chr1_2:49097661-49097680 None:intergenic 20.0%
!! TAAAAATATACACAAGTATG+AGG + chr1_2:49097802-49097821 None:intergenic 20.0%
!! ATTCCTAATAAATAAGACTA+AGG - chr1_2:49098451-49098470 Msa0074500:intron 20.0%
!! TTCCTAATAAATAAGACTAA+GGG - chr1_2:49098452-49098471 Msa0074500:intron 20.0%
!!! TTGTTTTAGTTCTCATAAAA+AGG - chr1_2:49098595-49098614 Msa0074500:intron 20.0%
!!! ATGTGTTTAATCTTTTTGTT+GGG - chr1_2:49099321-49099340 Msa0074500:intron 20.0%
!! AATGTCAACAAAATATTAGT+GGG - chr1_2:49099686-49099705 Msa0074500:intron 20.0%
! AAAAGAAAATGGAGATTGAT+TGG + chr1_2:49093385-49093404 None:intergenic 25.0%
! GAAGTGAATGAAAATGAAAA+TGG + chr1_2:49093433-49093452 None:intergenic 25.0%
!! ATTTTATTGGAAAGAAAGAG+TGG + chr1_2:49093486-49093505 None:intergenic 25.0%
! CTTGATTAAGTAATCGTAAT+CGG + chr1_2:49093645-49093664 None:intergenic 25.0%
! ATTCTGCTAAATATCTCATT+AGG - chr1_2:49093732-49093751 Msa0074500:three_prime_UTR 25.0%
! TACAAGTTTACTGTAACAAA+CGG - chr1_2:49093799-49093818 Msa0074500:CDS 25.0%
! TTTGTCAATGAAAAGGTAAA+AGG - chr1_2:49093837-49093856 Msa0074500:CDS 25.0%
! TTGTCAATGAAAAGGTAAAA+GGG - chr1_2:49093838-49093857 Msa0074500:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr1_2:49093931-49093950 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr1_2:49093932-49093951 None:intergenic 25.0%
!!! ATTTATTTTGGAGAGATAAG+TGG - chr1_2:49094302-49094321 Msa0074500:CDS 25.0%
!!! GTTTGCTATTATAGATAGAA+AGG - chr1_2:49094363-49094382 Msa0074500:intron 25.0%
! ATTGATGTTGTTGAATGATT+TGG - chr1_2:49094492-49094511 Msa0074500:CDS 25.0%
! CAACATAACAATGAAGAAAA+AGG + chr1_2:49094819-49094838 None:intergenic 25.0%
! TTCAATATGAACAAATGGTT+TGG + chr1_2:49094898-49094917 None:intergenic 25.0%
! GTTCATATTGAATGTTTGAT+AGG - chr1_2:49094906-49094925 Msa0074500:intron 25.0%
! GATGTTCTCAAAATAAATAG+TGG - chr1_2:49094928-49094947 Msa0074500:intron 25.0%
!! TTTCAAGAATCAAGATTTTG+AGG - chr1_2:49095019-49095038 Msa0074500:intron 25.0%
!! TGATGTTTTTCCTCTTTTTT+TGG - chr1_2:49095278-49095297 Msa0074500:intron 25.0%
!! AACAAATTTTATAACGCAGA+CGG + chr1_2:49095472-49095491 None:intergenic 25.0%
! AGATATATGAAAACAGAGTA+TGG + chr1_2:49095524-49095543 None:intergenic 25.0%
!! TGTTTTCATATATCTACCTT+GGG - chr1_2:49095529-49095548 Msa0074500:intron 25.0%
! TGTATGGAATGTATCTTATT+GGG - chr1_2:49095696-49095715 Msa0074500:intron 25.0%
!! TTCTTTTGTCTCTTTCTTTA+GGG - chr1_2:49095885-49095904 Msa0074500:intron 25.0%
!!! TAACACATTTTAGTATGTAC+AGG + chr1_2:49095917-49095936 None:intergenic 25.0%
! AGCGAATTAAATTGCAAATA+TGG - chr1_2:49095986-49096005 Msa0074500:intron 25.0%
! GCGAATTAAATTGCAAATAT+GGG - chr1_2:49095987-49096006 Msa0074500:intron 25.0%
! AAATCTTATTCAAAACAGGA+CGG + chr1_2:49096344-49096363 None:intergenic 25.0%
!!! GAATAAGATTTTAAGATTGG+TGG - chr1_2:49096353-49096372 Msa0074500:intron 25.0%
!!! TGCTTTTTTACTAGATTGTA+TGG - chr1_2:49096420-49096439 Msa0074500:intron 25.0%
!!! GCTTTTTTACTAGATTGTAT+GGG - chr1_2:49096421-49096440 Msa0074500:intron 25.0%
! TGAAAACTGAAGATATTAGA+TGG - chr1_2:49096637-49096656 Msa0074500:intron 25.0%
!!! AGTATTGTTAGTTTTTTGTC+GGG - chr1_2:49096849-49096868 Msa0074500:intron 25.0%
! ATAAGGGAAATGAATACAAA+TGG + chr1_2:49096954-49096973 None:intergenic 25.0%
! TAAATATTTGATATGGGAAG+AGG + chr1_2:49097600-49097619 None:intergenic 25.0%
! TACATTTATGATATGTCACA+AGG + chr1_2:49097630-49097649 None:intergenic 25.0%
!!! GTGACATTTTGAAAATGATT+AGG + chr1_2:49097662-49097681 None:intergenic 25.0%
!!! AGGTCTAGATTAGTTTAAAT+AGG + chr1_2:49097699-49097718 None:intergenic 25.0%
! GTGTGTATATATAATTGACT+CGG - chr1_2:49097833-49097852 Msa0074500:intron 25.0%
! TCCTAATAAATAAGACTAAG+GGG - chr1_2:49098453-49098472 Msa0074500:intron 25.0%
!!! TGTCTTATCATTTTTTTGTG+AGG + chr1_2:49098572-49098591 None:intergenic 25.0%
! TTTAATTGGACAACGTTAAA+AGG - chr1_2:49098739-49098758 Msa0074500:intron 25.0%
!!! CATGATTAATTTGATGATGA+AGG + chr1_2:49098862-49098881 None:intergenic 25.0%
! CTTCATCATCAAATTAATCA+TGG - chr1_2:49098860-49098879 Msa0074500:intron 25.0%
! GTCAAAATACTCTTTATTCA+TGG + chr1_2:49098941-49098960 None:intergenic 25.0%
!!! TTAAAATTTTAAAAAGGCGG+AGG - chr1_2:49099065-49099084 Msa0074500:intron 25.0%
!!! TTTTTTTTGGATACTGATCT+AGG - chr1_2:49099094-49099113 Msa0074500:intron 25.0%
!!! TTAGAGTATCATAGCTTTTT+AGG - chr1_2:49099168-49099187 Msa0074500:intron 25.0%
!! GATGTGTTTAATCTTTTTGT+TGG - chr1_2:49099320-49099339 Msa0074500:intron 25.0%
! ATTGTAGAAGATTAAGAATG+TGG + chr1_2:49099473-49099492 None:intergenic 25.0%
!! TACTTTTCAACCTTGTATTT+TGG - chr1_2:49099550-49099569 Msa0074500:intron 25.0%
!! ACTTTTCAACCTTGTATTTT+GGG - chr1_2:49099551-49099570 Msa0074500:intron 25.0%
! TGCTTAAATGTGTATTAAGA+TGG - chr1_2:49099584-49099603 Msa0074500:intron 25.0%
! CAATGTCAACAAAATATTAG+TGG - chr1_2:49099685-49099704 Msa0074500:intron 25.0%
! ATGTCAACAAAATATTAGTG+GGG - chr1_2:49099687-49099706 Msa0074500:intron 25.0%
!!! TTTTTAGTTGTTACTCTTGA+TGG - chr1_2:49099920-49099939 Msa0074500:intron 25.0%
! TGCAAAAACTAATATGAATG+TGG - chr1_2:49099998-49100017 Msa0074500:intron 25.0%
! AAAAACTAATATGAATGTGG+AGG - chr1_2:49100001-49100020 Msa0074500:intron 25.0%
! AATCCATCATAACAAAAGAA+AGG + chr1_2:49100105-49100124 None:intergenic 25.0%
!!! ATTTTACAGTTGCTACTTAT+TGG - chr1_2:49100460-49100479 Msa0074500:intron 25.0%
!!! TTTTACAGTTGCTACTTATT+GGG - chr1_2:49100461-49100480 Msa0074500:intron 25.0%
!! ATTTTCCCTTTTCTTTTTTC+AGG - chr1_2:49100568-49100587 Msa0074500:five_prime_UTR 25.0%
! TTTATACATTTGACGTTTCT+CGG - chr1_2:49100683-49100702 Msa0074500:five_prime_UTR 25.0%
GTGAATGAAAATGAAAATGG+TGG + chr1_2:49093430-49093449 None:intergenic 30.0%
! AGGTTTTTGAATAATCACGA+TGG - chr1_2:49093595-49093614 Msa0074500:three_prime_UTR 30.0%
AAGTCTACATGACAATCATA+TGG + chr1_2:49093904-49093923 None:intergenic 30.0%
! ATATTGAGAGGAAAGTTGAT+TGG - chr1_2:49094150-49094169 Msa0074500:CDS 30.0%
!!! AGTGCCAAGTTGATTTATTT+TGG - chr1_2:49094290-49094309 Msa0074500:CDS 30.0%
CTCTCCAAAATAAATCAACT+TGG + chr1_2:49094297-49094316 None:intergenic 30.0%
! ATCAACTTATGACTTTTTGG+AGG - chr1_2:49094579-49094598 Msa0074500:intron 30.0%
! TCAACTTATGACTTTTTGGA+GGG - chr1_2:49094580-49094599 Msa0074500:intron 30.0%
TTTGTGTTGGAAAATGATCT+AGG - chr1_2:49094607-49094626 Msa0074500:intron 30.0%
ATCTAGGTGAATTGGAAAAA+GGG - chr1_2:49094623-49094642 Msa0074500:intron 30.0%
! TCCAGAATAATTTGTGGAAA+AGG - chr1_2:49094727-49094746 Msa0074500:intron 30.0%
CATAACAATGAAGAAAAAGG+TGG + chr1_2:49094816-49094835 None:intergenic 30.0%
! AATATGAACAAATGGTTTGG+AGG + chr1_2:49094895-49094914 None:intergenic 30.0%
!! AATAGTGGAAAAAAGGGTTT+TGG - chr1_2:49094943-49094962 Msa0074500:intron 30.0%
!!! AAAAAGGGTTTTGGCTTATT+TGG - chr1_2:49094952-49094971 Msa0074500:intron 30.0%
TTCCATTCATAGAACATACA+TGG + chr1_2:49095113-49095132 None:intergenic 30.0%
GTATGTTCTATGAATGGAAA+TGG - chr1_2:49095114-49095133 Msa0074500:intron 30.0%
!!! TGTTTTTCCTCTTTTTTTGG+AGG - chr1_2:49095281-49095300 Msa0074500:intron 30.0%
!!! GTTTTTCCTCTTTTTTTGGA+GGG - chr1_2:49095282-49095301 Msa0074500:intron 30.0%
!!! TTTTTCCTCTTTTTTTGGAG+GGG - chr1_2:49095283-49095302 Msa0074500:intron 30.0%
! CTGTTTTCATATATCTACCT+TGG - chr1_2:49095528-49095547 Msa0074500:intron 30.0%
! GTTTTCATATATCTACCTTG+GGG - chr1_2:49095530-49095549 Msa0074500:intron 30.0%
ATACACTAATAATACTGCAG+TGG + chr1_2:49095681-49095700 None:intergenic 30.0%
ACTGCAGTATTATTAGTGTA+TGG - chr1_2:49095680-49095699 Msa0074500:intron 30.0%
GTGTATGGAATGTATCTTAT+TGG - chr1_2:49095695-49095714 Msa0074500:intron 30.0%
!!! CATTCTTTTTTCACATTTGC+AGG - chr1_2:49095738-49095757 Msa0074500:intron 30.0%
!!! ACCAGTTTTATTACAACCAT+TGG - chr1_2:49095810-49095829 Msa0074500:intron 30.0%
!!! CCAGTTTTATTACAACCATT+GGG - chr1_2:49095811-49095830 Msa0074500:intron 30.0%
! TTTTATTACAACCATTGGGT+AGG - chr1_2:49095815-49095834 Msa0074500:intron 30.0%
! CTTCTTTTGTCTCTTTCTTT+AGG - chr1_2:49095884-49095903 Msa0074500:intron 30.0%
! TCTTTTGTCTCTTTCTTTAG+GGG - chr1_2:49095886-49095905 Msa0074500:intron 30.0%
TAAATTGCAAATATGGGACA+CGG - chr1_2:49095993-49096012 Msa0074500:intron 30.0%
AGAAGGAGCAATAAATAAGT+AGG + chr1_2:49096198-49096217 None:intergenic 30.0%
TTAGCAAGTTAGAGAAGAAA+GGG + chr1_2:49096303-49096322 None:intergenic 30.0%
TTTAGCAAGTTAGAGAAGAA+AGG + chr1_2:49096304-49096323 None:intergenic 30.0%
! TTTTACTAGATTGTATGGGT+TGG - chr1_2:49096425-49096444 Msa0074500:intron 30.0%
AACATTAGCACAATATGACA+TGG - chr1_2:49096601-49096620 Msa0074500:intron 30.0%
TTCTTCCCAAAATATAGTGA+GGG + chr1_2:49096919-49096938 None:intergenic 30.0%
TTTCTTCCCAAAATATAGTG+AGG + chr1_2:49096920-49096939 None:intergenic 30.0%
!!! GAAGTATTTTTTGTAAGGAG+TGG + chr1_2:49097544-49097563 None:intergenic 30.0%
! ATTAGTTTAAATAGGAGCAG+TGG + chr1_2:49097691-49097710 None:intergenic 30.0%
ACAAGTAGTGTCCAAAATAT+AGG - chr1_2:49097765-49097784 Msa0074500:intron 30.0%
GGTACAATTATAACAGCATA+AGG + chr1_2:49098425-49098444 None:intergenic 30.0%
AGAGAAATGAGAGAAAGAAA+GGG + chr1_2:49098146-49098165 None:intergenic 30.0%
!! TAACTTGTTGCTTTCATTGA+AGG + chr1_2:49098335-49098354 None:intergenic 30.0%
CAATGAAAGCAACAAGTTAA+AGG - chr1_2:49098336-49098355 Msa0074500:CDS 30.0%
!! TCCCCTTAGTCTTATTTATT+AGG + chr1_2:49098457-49098476 None:intergenic 30.0%
CTAAGGGGAATCATTTATAA+TGG - chr1_2:49098468-49098487 Msa0074500:intron 30.0%
TTTGTGAGGATCATTATCAT+AGG + chr1_2:49098558-49098577 None:intergenic 30.0%
!! CTGTTTTGGATGATGATAAT+GGG + chr1_2:49098797-49098816 None:intergenic 30.0%
!! ATTTAGAAGCTATGCTGTTT+TGG + chr1_2:49098811-49098830 None:intergenic 30.0%
AATTTGCCAATTCAAGAAGT+TGG - chr1_2:49098833-49098852 Msa0074500:intron 30.0%
!!! GTTTTGAGGATATGAAAAGA+GGG + chr1_2:49098919-49098938 None:intergenic 30.0%
!! ACTCTTTATTCATGGTTTTG+AGG + chr1_2:49098933-49098952 None:intergenic 30.0%
CAATTATGCTCACAATTTGA+GGG - chr1_2:49098963-49098982 Msa0074500:intron 30.0%
!!! GCGGAGGTTTTTTTTTTTTT+TGG - chr1_2:49099081-49099100 Msa0074500:intron 30.0%
! TAGTGTGTTTGAAATAGTGA+TGG + chr1_2:49099281-49099300 None:intergenic 30.0%
GAATGTGGACAAAGTAATAA+AGG + chr1_2:49099458-49099477 None:intergenic 30.0%
TTTAAATCCACATGCATCAT+TGG - chr1_2:49099502-49099521 Msa0074500:intron 30.0%
! CTTTTCAACCTTGTATTTTG+GGG - chr1_2:49099552-49099571 Msa0074500:intron 30.0%
CTTAATACACATTTAAGCAC+TGG + chr1_2:49099583-49099602 None:intergenic 30.0%
! AGGTTTTCTTTTCAATAGCT+CGG - chr1_2:49100024-49100043 Msa0074500:intron 30.0%
!! CAACCTTTCTTTTGTTATGA+TGG - chr1_2:49100099-49100118 Msa0074500:intron 30.0%
AAAGAAAACCAGCAATATCA+AGG + chr1_2:49100201-49100220 None:intergenic 30.0%
CTACTATTATGTTGCATGTT+TGG - chr1_2:49100227-49100246 Msa0074500:intron 30.0%
! CGTTGCGCTAAATTTTTATT+TGG - chr1_2:49100262-49100281 Msa0074500:intron 30.0%
TTGGTTAATCTTGAGTGTTT+GGG + chr1_2:49100299-49100318 None:intergenic 30.0%
ATTAATTTCCCAACATAGGA+AGG + chr1_2:49100506-49100525 None:intergenic 30.0%
TGTGATTAATTTCCCAACAT+AGG + chr1_2:49100510-49100529 None:intergenic 30.0%
TACGAAGCTTAGCAATATAT+TGG + chr1_2:49100652-49100671 None:intergenic 30.0%
AAGTATGAAGAAATGACATG+TGG + chr1_2:49100782-49100801 None:intergenic 30.0%
!! TTGGATGAAGAGTTTGTTGT+TGG + chr1_2:49093366-49093385 None:intergenic 35.0%
GTCGAGATCTGAAAAGAAAA+TGG + chr1_2:49093396-49093415 None:intergenic 35.0%
TTGCTATAGTAGAAGGAGAT+AGG + chr1_2:49093554-49093573 None:intergenic 35.0%
CTAATATGATTGATCCACGA+TGG + chr1_2:49093577-49093596 None:intergenic 35.0%
CATCGTGGATCAATCATATT+AGG - chr1_2:49093575-49093594 Msa0074500:three_prime_UTR 35.0%
TTAATCAAGCTTCTCCTCAT+CGG - chr1_2:49093656-49093675 Msa0074500:three_prime_UTR 35.0%
AAGTTTACTGTAACAAACGG+AGG - chr1_2:49093802-49093821 Msa0074500:CDS 35.0%
AATAAGGTTGTTTGAAGGTG+AGG - chr1_2:49094026-49094045 Msa0074500:intron 35.0%
ATAAGGTTGTTTGAAGGTGA+GGG - chr1_2:49094027-49094046 Msa0074500:intron 35.0%
TACAACATGATTGTCCTTTG+TGG - chr1_2:49094095-49094114 Msa0074500:CDS 35.0%
! TTTAACTTCCTTGGAGGATT+CGG - chr1_2:49094216-49094235 Msa0074500:intron 35.0%
!! ATTTTGGAGAGATAAGTGGT+TGG - chr1_2:49094306-49094325 Msa0074500:intron 35.0%
!! TTTTGGAGAGATAAGTGGTT+GGG - chr1_2:49094307-49094326 Msa0074500:intron 35.0%
AGATAAGTGGTTGGGTAATA+GGG - chr1_2:49094315-49094334 Msa0074500:intron 35.0%
!!! TTTTTTGTGATCTTTTCCCG+CGG - chr1_2:49094338-49094357 Msa0074500:intron 35.0%
TCTATAATAGCAAACAACCG+CGG + chr1_2:49094358-49094377 None:intergenic 35.0%
AGTGAGGTTTGTGTTAGAAA+TGG - chr1_2:49094397-49094416 Msa0074500:intron 35.0%
GTGAGGTTTGTGTTAGAAAT+GGG - chr1_2:49094398-49094417 Msa0074500:intron 35.0%
TGAGGTTTGTGTTAGAAATG+GGG - chr1_2:49094399-49094418 Msa0074500:intron 35.0%
TAAATACCGAGAGAGATAGT+TGG - chr1_2:49094518-49094537 Msa0074500:intron 35.0%
AAATACCGAGAGAGATAGTT+GGG - chr1_2:49094519-49094538 Msa0074500:intron 35.0%
!! CAACTTATGACTTTTTGGAG+GGG - chr1_2:49094581-49094600 Msa0074500:intron 35.0%
GGAAAATGATCTAGGTGAAT+TGG - chr1_2:49094615-49094634 Msa0074500:intron 35.0%
GATCTAGGTGAATTGGAAAA+AGG - chr1_2:49094622-49094641 Msa0074500:intron 35.0%
TCTAGGTGAATTGGAAAAAG+GGG - chr1_2:49094624-49094643 Msa0074500:intron 35.0%
! GAATTGGAAAAAGGGGTTTT+TGG - chr1_2:49094631-49094650 Msa0074500:intron 35.0%
TTCCAGTCCAGAATAATTTG+TGG - chr1_2:49094721-49094740 Msa0074500:intron 35.0%
TTCCACAAATTATTCTGGAC+TGG + chr1_2:49094726-49094745 None:intergenic 35.0%
! GCCTTTTCCACAAATTATTC+TGG + chr1_2:49094731-49094750 None:intergenic 35.0%
!!! CTCTAGAGAGTGTTTTTTGT+GGG - chr1_2:49094770-49094789 Msa0074500:CDS 35.0%
!!! TGTTTTTTGTGGGAATGATG+AGG - chr1_2:49094780-49094799 Msa0074500:CDS 35.0%
TTATGTTGTTGCTCAAGTGT+GGG - chr1_2:49094831-49094850 Msa0074500:intron 35.0%
!! TGTGGGATAAGATTTTGAGA+TGG - chr1_2:49094848-49094867 Msa0074500:intron 35.0%
!!! AAGATTTTGAGATGGATAGC+TGG - chr1_2:49094856-49094875 Msa0074500:intron 35.0%
!!! AGATTTTGAGATGGATAGCT+GGG - chr1_2:49094857-49094876 Msa0074500:intron 35.0%
!!! AGATTTTGAGGTTGATGCAA+TGG - chr1_2:49095031-49095050 Msa0074500:intron 35.0%
! AGGAAATCAAAGTGCTCTTA+TGG - chr1_2:49095057-49095076 Msa0074500:intron 35.0%
CACCATGTATGTTCTATGAA+TGG - chr1_2:49095108-49095127 Msa0074500:intron 35.0%
CTATGAATGGAAATGGTGTA+CGG - chr1_2:49095121-49095140 Msa0074500:intron 35.0%
TATGAATGGAAATGGTGTAC+GGG - chr1_2:49095122-49095141 Msa0074500:intron 35.0%
!!! TTCTTTTTCAGCGCTGTTTT+GGG - chr1_2:49095187-49095206 Msa0074500:intron 35.0%
!!! TTTTCCTCTTTTTTTGGAGG+GGG - chr1_2:49095284-49095303 Msa0074500:intron 35.0%
!! TTTGTTTGTTGTTCCAGCAT+CGG - chr1_2:49095372-49095391 Msa0074500:intron 35.0%
! GTTTTCAACTTATTTCCCCA+AGG + chr1_2:49095548-49095567 None:intergenic 35.0%
!!! TTTTTTCACATTTGCAGGTG+TGG - chr1_2:49095743-49095762 Msa0074500:intron 35.0%
! TTTTTCACATTTGCAGGTGT+GGG - chr1_2:49095744-49095763 Msa0074500:intron 35.0%
CCCAATGGTTGTAATAAAAC+TGG + chr1_2:49095814-49095833 None:intergenic 35.0%
AAGAGACAAAAGAAGAACAG+CGG + chr1_2:49095879-49095898 None:intergenic 35.0%
CTGAAACTAACCAGTTGTAA+TGG + chr1_2:49096040-49096059 None:intergenic 35.0%
AATTAGTGAGAGCTCAATTG+TGG - chr1_2:49096111-49096130 Msa0074500:intron 35.0%
ATCTAATGTGCAAGAACAGA+AGG + chr1_2:49096215-49096234 None:intergenic 35.0%
TCTGTTCTTGCACATTAGAT+AGG - chr1_2:49096215-49096234 Msa0074500:intron 35.0%
! GGACGGTTTTCAATAACAAA+CGG + chr1_2:49096327-49096346 None:intergenic 35.0%
GTTGGATCTCTTCATTAGAT+TGG - chr1_2:49096443-49096462 Msa0074500:intron 35.0%
ATGTGTAAGGTGATTATCAG+GGG + chr1_2:49096537-49096556 None:intergenic 35.0%
CATGTGTAAGGTGATTATCA+GGG + chr1_2:49096538-49096557 None:intergenic 35.0%
TCATGTGTAAGGTGATTATC+AGG + chr1_2:49096539-49096558 None:intergenic 35.0%
AATCACCTTACACATGATTG+AGG - chr1_2:49096542-49096561 Msa0074500:intron 35.0%
CTAAACCTCAATCATGTGTA+AGG + chr1_2:49096550-49096569 None:intergenic 35.0%
TAGATTGAATATCGTGATCG+AGG - chr1_2:49097076-49097095 Msa0074500:intron 35.0%
TTGTAAGGAGTGGAGTTATA+AGG + chr1_2:49097534-49097553 None:intergenic 35.0%
TGTCAGAGTCTATACTTCAT+AGG + chr1_2:49097719-49097738 None:intergenic 35.0%
! TGTTCCAGTGTCCTATATTT+TGG + chr1_2:49097779-49097798 None:intergenic 35.0%
TGCTGTTATAATTGTACCAG+AGG - chr1_2:49097971-49097990 Msa0074500:intron 35.0%
AAGAGAAAAGATTGATCCTC+TGG + chr1_2:49097990-49098009 None:intergenic 35.0%
CACTTGTGTTAGAGTTAGTT+AGG - chr1_2:49098063-49098082 Msa0074500:intron 35.0%
CAGAGAAATGAGAGAAAGAA+AGG + chr1_2:49098147-49098166 None:intergenic 35.0%
!! CAAGTTAAAGGTGTTTGTTG+AGG - chr1_2:49098348-49098367 Msa0074500:CDS 35.0%
TGCTGTTATAATTGTACCAG+AGG + chr1_2:49097971-49097990 None:intergenic 35.0%
!! GCTGTTTTGGATGATGATAA+TGG + chr1_2:49098798-49098817 None:intergenic 35.0%
!!! GGTTTTGAGGATATGAAAAG+AGG + chr1_2:49098920-49098939 None:intergenic 35.0%
CCTCAAATTGTGAGCATAAT+TGG + chr1_2:49098965-49098984 None:intergenic 35.0%
CCAATTATGCTCACAATTTG+AGG - chr1_2:49098962-49098981 Msa0074500:intron 35.0%
!! CTAGGAGTGTTATATGCATA+CGG - chr1_2:49099112-49099131 Msa0074500:intron 35.0%
!! TAGGAGTGTTATATGCATAC+GGG - chr1_2:49099113-49099132 Msa0074500:intron 35.0%
GTTATATGCATACGGGAATA+CGG - chr1_2:49099120-49099139 Msa0074500:intron 35.0%
ACTGTTAAAAGACGACTCAT+CGG + chr1_2:49099395-49099414 None:intergenic 35.0%
TGTGGACAAAGTAATAAAGG+AGG + chr1_2:49099455-49099474 None:intergenic 35.0%
CATATCCAGACATCAAGAAT+TGG - chr1_2:49099633-49099652 Msa0074500:intron 35.0%
CAAAATATTAGTGGGGAACA+AGG - chr1_2:49099694-49099713 Msa0074500:intron 35.0%
TGACATGGATGAAAGCAAAA+GGG - chr1_2:49099718-49099737 Msa0074500:intron 35.0%
TACATGGAAAACCAAAAGGT+TGG + chr1_2:49099769-49099788 None:intergenic 35.0%
AAGTGTAGCATAGTAATCAC+AGG + chr1_2:49099801-49099820 None:intergenic 35.0%
GCTGGAAATTTATTCTCCTT+AGG - chr1_2:49099824-49099843 Msa0074500:intron 35.0%
AACTAATATGAATGTGGAGG+AGG - chr1_2:49100004-49100023 Msa0074500:intron 35.0%
! GGTTTTCTTTTCAATAGCTC+GGG - chr1_2:49100025-49100044 Msa0074500:intron 35.0%
TGGTTAATCTTGAGTGTTTG+GGG + chr1_2:49100298-49100317 None:intergenic 35.0%
GTTGGTTAATCTTGAGTGTT+TGG + chr1_2:49100300-49100319 None:intergenic 35.0%
TTTGAGCGAGGAAGTTAATT+TGG - chr1_2:49100399-49100418 Msa0074500:intron 35.0%
! TGCTACTTATTGGGTGTTAA+TGG - chr1_2:49100470-49100489 Msa0074500:intron 35.0%
AGGCTCCTGAAAAAAGAAAA+GGG + chr1_2:49100576-49100595 None:intergenic 35.0%
AGCAAACATTGTGTATAGTC+AGG + chr1_2:49100596-49100615 None:intergenic 35.0%
! AATATATTGGAGCACCAAGT+AGG + chr1_2:49100639-49100658 None:intergenic 35.0%
ACGATGGTTGCTATAGTAGA+AGG + chr1_2:49093561-49093580 None:intergenic 40.0%
TTCTACTATAGCAACCATCG+TGG - chr1_2:49093560-49093579 Msa0074500:three_prime_UTR 40.0%
! TGTAGACTTTTTGCCCTGTT+TGG - chr1_2:49093915-49093934 Msa0074500:intron 40.0%
!!! AGCGGTCAACTTGAGTTTTT+TGG - chr1_2:49094057-49094076 Msa0074500:intron 40.0%
TTGTCCTTTGTGGAAAGAAG+TGG - chr1_2:49094105-49094124 Msa0074500:CDS 40.0%
ACAACCACTTCTTTCCACAA+AGG + chr1_2:49094112-49094131 None:intergenic 40.0%
AAGTGGTTGTCAAGAAAGTG+TGG - chr1_2:49094122-49094141 Msa0074500:CDS 40.0%
! AGTGGTTGTCAAGAAAGTGT+GGG - chr1_2:49094123-49094142 Msa0074500:CDS 40.0%
!! CACCATATAGAAGCACTTCT+CGG + chr1_2:49094190-49094209 None:intergenic 40.0%
! GTGGAGAGATTTAACTTCCT+TGG - chr1_2:49094207-49094226 Msa0074500:intron 40.0%
! GAGAGATTTAACTTCCTTGG+AGG - chr1_2:49094210-49094229 Msa0074500:intron 40.0%
! TGGAGGAGATTGGTTCAAAA+GGG - chr1_2:49094247-49094266 Msa0074500:intron 40.0%
GAGATAAGTGGTTGGGTAAT+AGG - chr1_2:49094314-49094333 Msa0074500:intron 40.0%
CTATAATAGCAAACAACCGC+GGG + chr1_2:49094357-49094376 None:intergenic 40.0%
AAAGGATGCGAAATTGAGTG+AGG - chr1_2:49094381-49094400 Msa0074500:intron 40.0%
GAGAAGGTGGTTGTTTGTAT+GGG - chr1_2:49094447-49094466 Msa0074500:CDS 40.0%
AATACCGAGAGAGATAGTTG+GGG - chr1_2:49094520-49094539 Msa0074500:intron 40.0%
! TTTGGAGGGGATTTTTGTGT+TGG - chr1_2:49094594-49094613 Msa0074500:intron 40.0%
!! TTGGAAAAAGGGGTTTTTGG+AGG - chr1_2:49094634-49094653 Msa0074500:intron 40.0%
!! AGAGCAAGCCACTATTTTGA+AGG + chr1_2:49094679-49094698 None:intergenic 40.0%
!! TCAAAATAGTGGCTTGCTCT+TGG - chr1_2:49094679-49094698 Msa0074500:intron 40.0%
! TCTGGACTGGAATTCTATCT+AGG + chr1_2:49094713-49094732 None:intergenic 40.0%
! AAAACACTCTCTAGAGGCTT+CGG + chr1_2:49094766-49094785 None:intergenic 40.0%
CCACAAAAAACACTCTCTAG+AGG + chr1_2:49094772-49094791 None:intergenic 40.0%
!!! CCTCTAGAGAGTGTTTTTTG+TGG - chr1_2:49094769-49094788 Msa0074500:CDS 40.0%
GTTATGTTGTTGCTCAAGTG+TGG - chr1_2:49094830-49094849 Msa0074500:intron 40.0%
!!! GATTTTGAGATGGATAGCTG+GGG - chr1_2:49094858-49094877 Msa0074500:intron 40.0%
TTATTTGGCACACTACCGTT+TGG - chr1_2:49094967-49094986 Msa0074500:intron 40.0%
TATTTGGCACACTACCGTTT+GGG - chr1_2:49094968-49094987 Msa0074500:intron 40.0%
! TGATCTGGAGTACGAGAAAT+AGG - chr1_2:49094991-49095010 Msa0074500:intron 40.0%
!!! TTTTGAGGTTGATGCAATGG+TGG - chr1_2:49095034-49095053 Msa0074500:intron 40.0%
! TCAAAGTGCTCTTATGGAAG+TGG - chr1_2:49095063-49095082 Msa0074500:intron 40.0%
!!! GTTCTTTTTCAGCGCTGTTT+TGG - chr1_2:49095186-49095205 Msa0074500:intron 40.0%
CAAAACAACCACCCAGTATT+TGG + chr1_2:49095260-49095279 None:intergenic 40.0%
CAAACAAAACAGAGAATCGC+AGG + chr1_2:49095360-49095379 None:intergenic 40.0%
GTGGAGATATAAGGCATGTT+TGG + chr1_2:49095651-49095670 None:intergenic 40.0%
GGAGAAAGAGTGGAGATATA+AGG + chr1_2:49095660-49095679 None:intergenic 40.0%
CATCTGAGAAACGCAGTAAA+AGG + chr1_2:49095779-49095798 None:intergenic 40.0%
! CTTTTACTGCGTTTCTCAGA+TGG - chr1_2:49095777-49095796 Msa0074500:intron 40.0%
! TTGTCTCTTTCTTTAGGGGA+TGG - chr1_2:49095890-49095909 Msa0074500:intron 40.0%
! TGTCTCTTTCTTTAGGGGAT+GGG - chr1_2:49095891-49095910 Msa0074500:intron 40.0%
ATAAGGACCATAGAGCTTGA+TGG - chr1_2:49095961-49095980 Msa0074500:intron 40.0%
TGGAGATCGAACTACTTTAC+AGG + chr1_2:49096505-49096524 None:intergenic 40.0%
TGTGTAAGGTGATTATCAGG+GGG + chr1_2:49096536-49096555 None:intergenic 40.0%
AGCACAATATGACATGGATG+TGG - chr1_2:49096607-49096626 Msa0074500:intron 40.0%
!!! TGTTAGTTTTTTGTCGGGAG+TGG - chr1_2:49096854-49096873 Msa0074500:intron 40.0%
!!! GTTAGTTTTTTGTCGGGAGT+GGG - chr1_2:49096855-49096874 Msa0074500:intron 40.0%
ATGAAATCCACACACACAAG+TGG + chr1_2:49097119-49097138 None:intergenic 40.0%
CCAGAAGATTTGAGTAGTGA+GGG + chr1_2:49097475-49097494 None:intergenic 40.0%
CCTCACTACTCAAATCTTCT+GGG - chr1_2:49097473-49097492 Msa0074500:intron 40.0%
GAAGTATAGACTCTGACATG+CGG - chr1_2:49097721-49097740 Msa0074500:intron 40.0%
CTACTTGTGTCTCAAAGTGT+TGG + chr1_2:49097753-49097772 None:intergenic 40.0%
GTGTCCAAAATATAGGACAC+TGG - chr1_2:49097772-49097791 Msa0074500:intron 40.0%
TCTTCCTCCAGAATTCTGTT+AGG - chr1_2:49098006-49098025 Msa0074500:intron 40.0%
GTTGTCCTATCTCCTATGTT+AGG + chr1_2:49098040-49098059 None:intergenic 40.0%
TGAATCCTCAACTTCTAGCA+TGG - chr1_2:49098165-49098184 Msa0074500:CDS 40.0%
AGATACCATGCTAGAAGTTG+AGG + chr1_2:49098173-49098192 None:intergenic 40.0%
! TTCTTTTCGATCCTTAGCCA+TGG - chr1_2:49098199-49098218 Msa0074500:CDS 40.0%
! TGTTTGTTGAGGAACGAACA+TGG - chr1_2:49098359-49098378 Msa0074500:CDS 40.0%
!! AATTCCCAGTATTGATCCTC+TGG - chr1_2:49098404-49098423 Msa0074500:intron 40.0%
TGTACCAGAGGATCAATACT+GGG + chr1_2:49098411-49098430 None:intergenic 40.0%
TTGTACCAGAGGATCAATAC+TGG + chr1_2:49098412-49098431 None:intergenic 40.0%
GTGTCCAAGACTTGTCTAAT+AGG - chr1_2:49098695-49098714 Msa0074500:intron 40.0%
GACACCTATTAGACAAGTCT+TGG + chr1_2:49098702-49098721 None:intergenic 40.0%
AGGTGACCAACTTCTTGAAT+TGG + chr1_2:49098842-49098861 None:intergenic 40.0%
AGGATATGAAAAGAGGGAGA+GGG + chr1_2:49098913-49098932 None:intergenic 40.0%
TCACAATTTGAGGGAGAACA+AGG - chr1_2:49098972-49098991 Msa0074500:intron 40.0%
!! TGTATCCCAAAGTGTTGAAG+AGG - chr1_2:49099011-49099030 Msa0074500:intron 40.0%
AACTGCGCAAAACTATAACC+AGG + chr1_2:49099432-49099451 None:intergenic 40.0%
ACTTACTCCAATGATGCATG+TGG + chr1_2:49099512-49099531 None:intergenic 40.0%
TGGAATCTCCCCAAAATACA+AGG + chr1_2:49099563-49099582 None:intergenic 40.0%
CGAATCCAATTCTTGATGTC+TGG + chr1_2:49099641-49099660 None:intergenic 40.0%
CTGACATGGATGAAAGCAAA+AGG - chr1_2:49099717-49099736 Msa0074500:intron 40.0%
! TCACTCTTTCTCCAACCTTT+TGG - chr1_2:49099755-49099774 Msa0074500:intron 40.0%
CGTGTACATGGAAAACCAAA+AGG + chr1_2:49099773-49099792 None:intergenic 40.0%
TACTATGCTACACTTGATGC+TGG - chr1_2:49099806-49099825 Msa0074500:intron 40.0%
! TTTGAAGTTGGAACAGCCTA+AGG + chr1_2:49099843-49099862 None:intergenic 40.0%
TTAGGCTGTTCCAACTTCAA+AGG - chr1_2:49099842-49099861 Msa0074500:intron 40.0%
TAGGCTGTTCCAACTTCAAA+GGG - chr1_2:49099843-49099862 Msa0074500:intron 40.0%
AGAAAGTGACTCAAAGACTG+AGG - chr1_2:49100067-49100086 Msa0074500:intron 40.0%
AGACTCTTCCTTGATATTGC+TGG - chr1_2:49100190-49100209 Msa0074500:intron 40.0%
AATTTAGCGCAACGATGATG+AGG + chr1_2:49100256-49100275 None:intergenic 40.0%
AAGATTAACCAACCAGACCA+GGG - chr1_2:49100307-49100326 Msa0074500:intron 40.0%
AGACTAGATCCTTCCTATGT+TGG - chr1_2:49100494-49100513 Msa0074500:CDS 40.0%
GACTAGATCCTTCCTATGTT+GGG - chr1_2:49100495-49100514 Msa0074500:CDS 40.0%
CAGGCTCCTGAAAAAAGAAA+AGG + chr1_2:49100577-49100596 None:intergenic 40.0%
GAAAGAAAGAGTGGAGAGTG+GGG + chr1_2:49093477-49093496 None:intergenic 45.0%
GGAAAGAAAGAGTGGAGAGT+GGG + chr1_2:49093478-49093497 None:intergenic 45.0%
TGGAAAGAAAGAGTGGAGAG+TGG + chr1_2:49093479-49093498 None:intergenic 45.0%
!!! ACTTGAGTTTTTTGGCGCGT+TGG - chr1_2:49094065-49094084 Msa0074500:intron 45.0%
! GTGGTTGTCAAGAAAGTGTG+GGG - chr1_2:49094124-49094143 Msa0074500:CDS 45.0%
! GAGAGGAAAGTTGATTGGAG+TGG - chr1_2:49094155-49094174 Msa0074500:intron 45.0%
!! TGCCGAGAAGTGCTTCTATA+TGG - chr1_2:49094185-49094204 Msa0074500:intron 45.0%
!! CGAGAAGTGCTTCTATATGG+TGG - chr1_2:49094188-49094207 Msa0074500:intron 45.0%
! TCCTTGGAGGATTCGGTATT+CGG - chr1_2:49094223-49094242 Msa0074500:intron 45.0%
! GTGGAGGAGATTGGTTCAAA+AGG - chr1_2:49094246-49094265 Msa0074500:intron 45.0%
GTGTTAGAAATGGGGAAGAG+TGG - chr1_2:49094407-49094426 Msa0074500:intron 45.0%
GAAATGGGGAAGAGTGGAAT+TGG - chr1_2:49094413-49094432 Msa0074500:intron 45.0%
GGAGAAGGTGGTTGTTTGTA+TGG - chr1_2:49094446-49094465 Msa0074500:CDS 45.0%
AAGGTGGTTGTTTGTATGGG+AGG - chr1_2:49094450-49094469 Msa0074500:CDS 45.0%
ATACCGAGAGAGATAGTTGG+GGG - chr1_2:49094521-49094540 Msa0074500:intron 45.0%
!! AAGGTGCCAGACTTTTCCAA+AGG + chr1_2:49094660-49094679 None:intergenic 45.0%
GTCTGGCACCTTCAAAATAG+TGG - chr1_2:49094668-49094687 Msa0074500:intron 45.0%
! AAACACTCTCTAGAGGCTTC+GGG + chr1_2:49094765-49094784 None:intergenic 45.0%
TGTTGGGGGTAACCAAATAC+TGG - chr1_2:49095245-49095264 Msa0074500:intron 45.0%
GTTGGGGGTAACCAAATACT+GGG - chr1_2:49095246-49095265 Msa0074500:intron 45.0%
!!! TCTTTTTTTGGAGGGGGTCA+GGG - chr1_2:49095290-49095309 Msa0074500:intron 45.0%
CCTGAACAACGCAACAAACA+GGG + chr1_2:49095330-49095349 None:intergenic 45.0%
TCCTGAACAACGCAACAAAC+AGG + chr1_2:49095331-49095350 None:intergenic 45.0%
! TGTTTGTTGCGTTGTTCAGG+AGG - chr1_2:49095330-49095349 Msa0074500:intron 45.0%
!! TGTTGTTCCAGCATCGGTTT+AGG - chr1_2:49095378-49095397 Msa0074500:intron 45.0%
!! GTTGTTCCAGCATCGGTTTA+GGG - chr1_2:49095379-49095398 Msa0074500:intron 45.0%
ATACTGCAGTGGAGAAAGAG+TGG + chr1_2:49095670-49095689 None:intergenic 45.0%
AGATCAGAGAACCTACCCAA+TGG + chr1_2:49095829-49095848 None:intergenic 45.0%
TCGCTTACCATCAAGCTCTA+TGG + chr1_2:49095971-49095990 None:intergenic 45.0%
CGGTTTCGAACCATTACAAC+TGG - chr1_2:49096027-49096046 Msa0074500:intron 45.0%
! CTGGGCCCTCACTATATTTT+GGG - chr1_2:49096911-49096930 Msa0074500:intron 45.0%
AAATCCACACACACAAGTGG+AGG + chr1_2:49097116-49097135 None:intergenic 45.0%
GCGTAGACGAGAAAACATGT+TGG - chr1_2:49097232-49097251 Msa0074500:intron 45.0%
CCCTCACTACTCAAATCTTC+TGG - chr1_2:49097472-49097491 Msa0074500:intron 45.0%
CCCAGAAGATTTGAGTAGTG+AGG + chr1_2:49097476-49097495 None:intergenic 45.0%
GGAGTGGAGTTATAAGGAGA+TGG + chr1_2:49097528-49097547 None:intergenic 45.0%
CTGTCCTAACAGAATTCTGG+AGG + chr1_2:49098013-49098032 None:intergenic 45.0%
CAGCTGTCCTAACAGAATTC+TGG + chr1_2:49098016-49098035 None:intergenic 45.0%
TAGGACAGCTGTCCTAACAT+AGG - chr1_2:49098025-49098044 Msa0074500:intron 45.0%
GCTGTCCTAACATAGGAGAT+AGG - chr1_2:49098032-49098051 Msa0074500:intron 45.0%
ATGAGCAGAAGTAGGAGAAG+TGG + chr1_2:49098232-49098251 None:intergenic 45.0%
TCAGTGACATGAGCAGAAGT+AGG + chr1_2:49098240-49098259 None:intergenic 45.0%
! AGAAGTGTGAGACAAGTGTC+TGG - chr1_2:49098638-49098657 Msa0074500:intron 45.0%
AGGTGTTTGACATGTGTCCA+AGG - chr1_2:49098759-49098778 Msa0074500:intron 45.0%
GGTGTTTGACATGTGTCCAA+GGG - chr1_2:49098760-49098779 Msa0074500:intron 45.0%
ATGGGAAGATGAAGATCCCT+TGG + chr1_2:49098779-49098798 None:intergenic 45.0%
GAGGATATGAAAAGAGGGAG+AGG + chr1_2:49098914-49098933 None:intergenic 45.0%
GAGAACAAGGCTCAAGTTAC+TGG - chr1_2:49098985-49099004 Msa0074500:intron 45.0%
GGATGCCTCTTCAACACTTT+GGG + chr1_2:49099019-49099038 None:intergenic 45.0%
AGGATGCCTCTTCAACACTT+TGG + chr1_2:49099020-49099039 None:intergenic 45.0%
AGCTTATTACCGTGGAGCAA+TGG - chr1_2:49099345-49099364 Msa0074500:intron 45.0%
GCTTATTACCGTGGAGCAAT+GGG - chr1_2:49099346-49099365 Msa0074500:intron 45.0%
GCAAAATACCCATTGCTCCA+CGG + chr1_2:49099357-49099376 None:intergenic 45.0%
GCAAAACTATAACCAGGAGG+AGG + chr1_2:49099426-49099445 None:intergenic 45.0%
TGCGCAAAACTATAACCAGG+AGG + chr1_2:49099429-49099448 None:intergenic 45.0%
TGGAGAAAGAGTGAGTGTGT+GGG + chr1_2:49099749-49099768 None:intergenic 45.0%
TTGGAGAAAGAGTGAGTGTG+TGG + chr1_2:49099750-49099769 None:intergenic 45.0%
TCACAGGAGATACGTGTACA+TGG + chr1_2:49099785-49099804 None:intergenic 45.0%
!! AGAGCTTGACCCTTTGAAGT+TGG + chr1_2:49099855-49099874 None:intergenic 45.0%
AACTTCAAAGGGTCAAGCTC+TGG - chr1_2:49099854-49099873 Msa0074500:intron 45.0%
CAAGATTAACCAACCAGACC+AGG - chr1_2:49100306-49100325 Msa0074500:intron 45.0%
TCACAAACGTCTTCTTGCTG+TGG - chr1_2:49100349-49100368 Msa0074500:intron 45.0%
CTTGCAACTACATTTGAGCG+AGG - chr1_2:49100387-49100406 Msa0074500:intron 45.0%
AACAACATCCTTCGCCTACT+TGG - chr1_2:49100622-49100641 Msa0074500:intron 45.0%
!! ATATATATAATAAAATCAAA+CGG - chr1_2:49093992-49094011 Msa0074500:intron 5.0%
!! AAATAATAAATATTTGATAT+GGG + chr1_2:49097606-49097625 None:intergenic 5.0%
!! AAAATAATAAATATTTGATA+TGG + chr1_2:49097607-49097626 None:intergenic 5.0%
!!! TATCTTTTAAAATTTTAAAA+AGG - chr1_2:49099059-49099078 Msa0074500:intron 5.0%
TAATCGGATCGAGCTCTTGC+AGG + chr1_2:49093629-49093648 None:intergenic 50.0%
CTTCTCCTCATCGGTGATAG+CGG - chr1_2:49093665-49093684 Msa0074500:three_prime_UTR 50.0%
! GTTGTCAAGAAAGTGTGGGG+TGG - chr1_2:49094127-49094146 Msa0074500:CDS 50.0%
AGTGTGGGGTGGATATTGAG+AGG - chr1_2:49094138-49094157 Msa0074500:CDS 50.0%
! CCTTGGAGGATTCGGTATTC+GGG - chr1_2:49094224-49094243 Msa0074500:intron 50.0%
AGTGGAATTGGACGTGGTTG+TGG - chr1_2:49094425-49094444 Msa0074500:intron 50.0%
ATTGGACGTGGTTGTGGAGA+AGG - chr1_2:49094431-49094450 Msa0074500:CDS 50.0%
CTACCCCCAACTATCTCTCT+CGG + chr1_2:49094527-49094546 None:intergenic 50.0%
AGATAGTTGGGGGTAGAGAC+CGG - chr1_2:49094531-49094550 Msa0074500:intron 50.0%
!! AAGGGGTTTTTGGAGGCCTT+TGG - chr1_2:49094641-49094660 Msa0074500:intron 50.0%
! TGGAGGCCTTTGGAAAAGTC+TGG - chr1_2:49094651-49094670 Msa0074500:intron 50.0%
ACACTACCGTTTGGGTGATC+TGG - chr1_2:49094976-49094995 Msa0074500:intron 50.0%
CGTACTCCAGATCACCCAAA+CGG + chr1_2:49094985-49095004 None:intergenic 50.0%
!! TGAGGTTGATGCAATGGTGG+AGG - chr1_2:49095037-49095056 Msa0074500:intron 50.0%
GTACGGGAGATTGCTTTGCT+AGG - chr1_2:49095138-49095157 Msa0074500:intron 50.0%
GGGAGATTGCTTTGCTAGGT+GGG - chr1_2:49095142-49095161 Msa0074500:intron 50.0%
TGCTTTGCTAGGTGGGAAGT+TGG - chr1_2:49095149-49095168 Msa0074500:intron 50.0%
GCTTTGCTAGGTGGGAAGTT+GGG - chr1_2:49095150-49095169 Msa0074500:intron 50.0%
GAAGTTGGGATTGCTGTGCA+TGG - chr1_2:49095164-49095183 Msa0074500:intron 50.0%
CTGTGTACGTGGCTGTTGAT+TGG - chr1_2:49095218-49095237 Msa0074500:intron 50.0%
! GCTGTTGATTGGCGTGTGTT+GGG - chr1_2:49095229-49095248 Msa0074500:intron 50.0%
! CTGTTGATTGGCGTGTGTTG+GGG - chr1_2:49095230-49095249 Msa0074500:intron 50.0%
! TGTTGATTGGCGTGTGTTGG+GGG - chr1_2:49095231-49095250 Msa0074500:intron 50.0%
CTGACCCCCTCCAAAAAAAG+AGG + chr1_2:49095291-49095310 None:intergenic 50.0%
!!! CTCTTTTTTTGGAGGGGGTC+AGG - chr1_2:49095289-49095308 Msa0074500:intron 50.0%
!!! CTTTTTTTGGAGGGGGTCAG+GGG - chr1_2:49095291-49095310 Msa0074500:intron 50.0%
! CCCTGTTTGTTGCGTTGTTC+AGG - chr1_2:49095327-49095346 Msa0074500:intron 50.0%
!! CGGTTTAGGGTACTGGATTG+TGG - chr1_2:49095392-49095411 Msa0074500:intron 50.0%
! TTGTATCCGCTCTTTTCGCC+CGG - chr1_2:49095425-49095444 Msa0074500:intron 50.0%
GGTACCATCACAAGCCATGA+TGG + chr1_2:49095451-49095470 None:intergenic 50.0%
TTGCAAATATGGGACACGGC+TGG - chr1_2:49095997-49096016 Msa0074500:intron 50.0%
AGTAGTTCGATCTCCAGTGC+CGG - chr1_2:49096509-49096528 Msa0074500:intron 50.0%
AAGGTGATTATCAGGGGGTC+CGG + chr1_2:49096531-49096550 None:intergenic 50.0%
!!! TTTTTTGTCGGGAGTGGGCA+GGG - chr1_2:49096860-49096879 Msa0074500:intron 50.0%
ACCCAGGTTGCACACATTGT+GGG - chr1_2:49096887-49096906 Msa0074500:intron 50.0%
CCAAAATATAGTGAGGGCCC+AGG + chr1_2:49096913-49096932 None:intergenic 50.0%
! CCTGGGCCCTCACTATATTT+TGG - chr1_2:49096910-49096929 Msa0074500:intron 50.0%
GAATTTGATCCCCACTCCCA+GGG + chr1_2:49097504-49097523 None:intergenic 50.0%
AGAATTTGATCCCCACTCCC+AGG + chr1_2:49097505-49097524 None:intergenic 50.0%
TAGACTCTGACATGCGGACA+CGG - chr1_2:49097727-49097746 Msa0074500:intron 50.0%
!! GAATGTTGTTGGTGCTGCTG+TGG + chr1_2:49098274-49098293 None:intergenic 50.0%
GAGGGATGCTTGTGGGATAT+TGG + chr1_2:49098895-49098914 None:intergenic 50.0%
TGTTGGGCAGCTTATTACCG+TGG - chr1_2:49099337-49099356 Msa0074500:intron 50.0%
CAGTAAGTTCTTCCTCCTCC+TGG - chr1_2:49099411-49099430 Msa0074500:intron 50.0%
GGAGAAAGAGTGAGTGTGTG+GGG + chr1_2:49099748-49099767 None:intergenic 50.0%
! CAAGCTCTGGCAGACGAATA+CGG - chr1_2:49099867-49099886 Msa0074500:intron 50.0%
ACGAACCGCTATCACCGATG+AGG + chr1_2:49093673-49093692 None:intergenic 55.0%
GAAGGTGAGGGATGTGAGAG+CGG - chr1_2:49094039-49094058 Msa0074500:intron 55.0%
CCCGAATACCGAATCCTCCA+AGG + chr1_2:49094227-49094246 None:intergenic 55.0%
! TGGAGGATTCGGTATTCGGG+TGG - chr1_2:49094227-49094246 Msa0074500:intron 55.0%
! AGGATTCGGTATTCGGGTGG+AGG - chr1_2:49094230-49094249 Msa0074500:intron 55.0%
GGTATTCGGGTGGAGGAGAT+TGG - chr1_2:49094237-49094256 Msa0074500:intron 55.0%
GGGAAGAGTGGAATTGGACG+TGG - chr1_2:49094419-49094438 Msa0074500:intron 55.0%
GAGAACACACCTCCACCTTC+CGG + chr1_2:49094553-49094572 None:intergenic 55.0%
CGGGAGATTGCTTTGCTAGG+TGG - chr1_2:49095141-49095160 Msa0074500:intron 55.0%
!!! TCAGCGCTGTTTTGGGTTGC+TGG - chr1_2:49095194-49095213 Msa0074500:intron 55.0%
!!! CAGCGCTGTTTTGGGTTGCT+GGG - chr1_2:49095195-49095214 Msa0074500:intron 55.0%
! GGCTGTTGATTGGCGTGTGT+TGG - chr1_2:49095228-49095247 Msa0074500:intron 55.0%
GGGGGTAACCAAATACTGGG+TGG - chr1_2:49095249-49095268 Msa0074500:intron 55.0%
CCAGTACCCTAAACCGATGC+TGG + chr1_2:49095388-49095407 None:intergenic 55.0%
!! CCAGCATCGGTTTAGGGTAC+TGG - chr1_2:49095385-49095404 Msa0074500:intron 55.0%
CATCACAAGCCATGATGGCC+GGG + chr1_2:49095446-49095465 None:intergenic 55.0%
CCATCACAAGCCATGATGGC+CGG + chr1_2:49095447-49095466 None:intergenic 55.0%
!!! GTTTTTTGTCGGGAGTGGGC+AGG - chr1_2:49096859-49096878 Msa0074500:intron 55.0%
GACCCAGGTTGCACACATTG+TGG - chr1_2:49096886-49096905 Msa0074500:intron 55.0%
GCCCACAATGTGTGCAACCT+GGG + chr1_2:49096891-49096910 None:intergenic 55.0%
GTTGCACACATTGTGGGCCT+GGG - chr1_2:49096893-49096912 Msa0074500:intron 55.0%
CGTGATCGAGGTTCGAACCT+CGG - chr1_2:49097088-49097107 Msa0074500:intron 55.0%
AAATCTTCTGGGTCCGTCCC+TGG - chr1_2:49097484-49097503 Msa0074500:intron 55.0%
AATCTTCTGGGTCCGTCCCT+GGG - chr1_2:49097485-49097504 Msa0074500:intron 55.0%
GTGGCTGATAGCCATGGCTA+AGG + chr1_2:49098213-49098232 None:intergenic 55.0%
GGAGAAGTGGCTGATAGCCA+TGG + chr1_2:49098219-49098238 None:intergenic 55.0%
!! TGTTGTTGGTGCTGCTGTGG+CGG + chr1_2:49098271-49098290 None:intergenic 55.0%
! GTCTGGCCAAGAGCATGCAT+CGG - chr1_2:49098655-49098674 Msa0074500:intron 55.0%
ACTGAGCCGATGCATGCTCT+TGG + chr1_2:49098664-49098683 None:intergenic 55.0%
AGAGGGAGAGGGATGCTTGT+GGG + chr1_2:49098902-49098921 None:intergenic 55.0%
AAGAGGGAGAGGGATGCTTG+TGG + chr1_2:49098903-49098922 None:intergenic 55.0%
AGTGGGGAACAAGGCTGACA+TGG - chr1_2:49099703-49099722 Msa0074500:intron 55.0%
! TTGGAGCACCAAGTAGGCGA+AGG + chr1_2:49100633-49100652 None:intergenic 55.0%
TCGGATCGAGCTCTTGCAGG+TGG + chr1_2:49093626-49093645 None:intergenic 60.0%
GGACGTGGTTGTGGAGAAGG+TGG - chr1_2:49094434-49094453 Msa0074500:CDS 60.0%
AGTTGGGGGTAGAGACCGGA+AGG - chr1_2:49094535-49094554 Msa0074500:intron 60.0%
TGATGGCCGGGCGAAAAGAG+CGG + chr1_2:49095434-49095453 None:intergenic 60.0%
! CTCTTTTCGCCCGGCCATCA+TGG - chr1_2:49095434-49095453 Msa0074500:intron 60.0%
! CCGGCCATCATGGCTTGTGA+TGG - chr1_2:49095444-49095463 Msa0074500:intron 60.0%
ATTATCAGGGGGTCCGGCAC+TGG + chr1_2:49096525-49096544 None:intergenic 60.0%
GGCCCACAATGTGTGCAACC+TGG + chr1_2:49096892-49096911 None:intergenic 60.0%
GGTTGCACACATTGTGGGCC+TGG - chr1_2:49096892-49096911 Msa0074500:intron 60.0%
ACACACAAGTGGAGGAGCCG+AGG + chr1_2:49097108-49097127 None:intergenic 60.0%
GGCTCCTCCACTTGTGTGTG+TGG - chr1_2:49097109-49097128 Msa0074500:intron 60.0%
TTGATCCCCACTCCCAGGGA+CGG + chr1_2:49097500-49097519 None:intergenic 60.0%
AACCAACCAGACCAGGGAGC+TGG - chr1_2:49100313-49100332 Msa0074500:intron 60.0%
TGGGGGTAGAGACCGGAAGG+TGG - chr1_2:49094538-49094557 Msa0074500:intron 65.0%
GGGTAGAGACCGGAAGGTGG+AGG - chr1_2:49094541-49094560 Msa0074500:intron 65.0%
GGGTTGCTGGGCTGTGTACG+TGG - chr1_2:49095207-49095226 Msa0074500:intron 65.0%
! GGGACACGGCTGGTCAAGAG+CGG - chr1_2:49096007-49096026 Msa0074500:intron 65.0%
TTGTCGGGAGTGGGCAGGGA+CGG - chr1_2:49096864-49096883 Msa0074500:intron 65.0%
AGCCAGCTCCCTGGTCTGGT+TGG + chr1_2:49100318-49100337 None:intergenic 65.0%
CTTGAGCAGAGCCAGCTCCC+TGG + chr1_2:49100327-49100346 None:intergenic 65.0%
TCTGGGTCCGTCCCTGGGAG+TGG - chr1_2:49097490-49097509 Msa0074500:intron 70.0%
CTGGGTCCGTCCCTGGGAGT+GGG - chr1_2:49097491-49097510 Msa0074500:intron 70.0%
TGGGTCCGTCCCTGGGAGTG+GGG - chr1_2:49097492-49097511 Msa0074500:intron 70.0%
GCAGAGCCAGCTCCCTGGTC+TGG + chr1_2:49100322-49100341 None:intergenic 70.0%
GAGTGGGCAGGGACGGACCC+AGG - chr1_2:49096871-49096890 Msa0074500:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 49093304 49100863 49093304 ID=Msa0074500;Name=Msa0074500
chr1_2 mRNA 49093304 49100863 49093304 ID=Msa0074500-mRNA-1;Parent=Msa0074500;Name=Msa0074500-mRNA-1;_AED=0.32;_eAED=0.32;_QI=265|1|1|1|0.87|0.77|9|485|216
chr1_2 exon 49093304 49093872 49093304 ID=Msa0074500-mRNA-1:exon:15004;Parent=Msa0074500-mRNA-1
chr1_2 exon 49094079 49094171 49094079 ID=Msa0074500-mRNA-1:exon:15003;Parent=Msa0074500-mRNA-1
chr1_2 exon 49094259 49094321 49094259 ID=Msa0074500-mRNA-1:exon:15002;Parent=Msa0074500-mRNA-1
chr1_2 exon 49094428 49094525 49094428 ID=Msa0074500-mRNA-1:exon:15001;Parent=Msa0074500-mRNA-1
chr1_2 exon 49094755 49094820 49094755 ID=Msa0074500-mRNA-1:exon:15000;Parent=Msa0074500-mRNA-1
chr1_2 exon 49098119 49098219 49098119 ID=Msa0074500-mRNA-1:exon:14999;Parent=Msa0074500-mRNA-1
chr1_2 exon 49098335 49098407 49098335 ID=Msa0074500-mRNA-1:exon:14998;Parent=Msa0074500-mRNA-1
chr1_2 exon 49100481 49100634 49100481 ID=Msa0074500-mRNA-1:exon:14997;Parent=Msa0074500-mRNA-1
chr1_2 exon 49100680 49100863 49100680 ID=Msa0074500-mRNA-1:exon:14996;Parent=Msa0074500-mRNA-1
chr1_2 five_prime_UTR 49100680 49100863 49100680 ID=Msa0074500-mRNA-1:five_prime_utr;Parent=Msa0074500-mRNA-1
chr1_2 five_prime_UTR 49100554 49100634 49100554 ID=Msa0074500-mRNA-1:five_prime_utr;Parent=Msa0074500-mRNA-1
chr1_2 CDS 49100481 49100553 49100481 ID=Msa0074500-mRNA-1:cds;Parent=Msa0074500-mRNA-1
chr1_2 CDS 49098335 49098407 49098335 ID=Msa0074500-mRNA-1:cds;Parent=Msa0074500-mRNA-1
chr1_2 CDS 49098119 49098219 49098119 ID=Msa0074500-mRNA-1:cds;Parent=Msa0074500-mRNA-1
chr1_2 CDS 49094755 49094820 49094755 ID=Msa0074500-mRNA-1:cds;Parent=Msa0074500-mRNA-1
chr1_2 CDS 49094428 49094525 49094428 ID=Msa0074500-mRNA-1:cds;Parent=Msa0074500-mRNA-1
chr1_2 CDS 49094259 49094321 49094259 ID=Msa0074500-mRNA-1:cds;Parent=Msa0074500-mRNA-1
chr1_2 CDS 49094079 49094171 49094079 ID=Msa0074500-mRNA-1:cds;Parent=Msa0074500-mRNA-1
chr1_2 CDS 49093789 49093872 49093789 ID=Msa0074500-mRNA-1:cds;Parent=Msa0074500-mRNA-1
chr1_2 three_prime_UTR 49093304 49093788 49093304 ID=Msa0074500-mRNA-1:three_prime_utr;Parent=Msa0074500-mRNA-1
Gene Sequence

>Msa0074500

ATGGCTGCTCCACCTGCAAGAGCTCGATCCGATTACGATTACTTAATCAAGCTTCTCCTCATCGGTGATAGCGGTGTGGGTAAAAGTTGCCTTTTACTGCGTTTCTCAGATGGTTCATTCACAACCAGTTTTATTACAACCATTGGCATTGATTTCAAAATAAGGACCATAGAGCTTGATGGTAAGCGAATTAAATTGCAAATATGGGACACGGCTGGTCAAGAGCGGTTTCGAACCATTACAACTGCTTATTACCGTGGAGCAATGGGTATTTTGCTTGTGTATGATGTCACCGATGAGTCGTCTTTTAACAACATCAAGAATTGGATTCGCAACATTGAGCAGCATGCTTCTGACAATGTCAACAAAATATTAGTGGGGAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCAACTTCAAAGGGTCAAGCTCTGGCAGACGAATACGGCATCAAGTTTTTCGAAACTAGTGCAAAAACTAATATGAATGTGGAGGAGGTTTTCTTTTCAATAGCTCGGGACATCAAACAAAGACTTGCAGAAAGTGACTCAAAGACTGAGCCCCAAACACTCAAGATTAACCAACCAGACCAGGGAGCTGGCTCTGCTCAAGCATCACAAACGTCTTCTTGCTGTGGTTCTTAG
Protein sequence

>Msa0074500

MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKTEPQTLKINQPDQGAGSAQASQTSSCCGS*