AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0083330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0083330 MtrunA17_Chr1g0196781 96.800 250 8 0 260 509 67 316 0.0 511
Msa0083330 MtrunA17_Chr1g0196781 88.406 69 3 1 105 168 1 69 6.60e-29 116
Msa0083330 MtrunA17_Chr1g0196771 93.396 106 7 0 1 106 107 212 7.06e-66 212
Msa0083330 MtrunA17_Chr3g0115631 49.045 157 58 6 343 489 148 292 1.92e-35 135
Msa0083330 MtrunA17_Chr8g0382491 56.897 116 41 3 330 441 94 204 4.12e-34 130
Msa0083330 MtrunA17_Chr5g0425561 58.947 95 37 1 343 435 171 265 2.71e-31 124
Msa0083330 MtrunA17_Chr2g0324131 80.328 61 12 0 343 403 216 276 1.11e-28 118
Msa0083330 MtrunA17_Chr7g0221471 52.128 94 38 2 345 438 51 137 1.45e-24 100
Msa0083330 MtrunA17_Chr7g0221501 52.128 94 38 2 345 438 51 137 9.15e-23 95.5
Msa0083330 MtrunA17_Chr8g0346741 57.534 73 31 0 333 405 27 99 3.35e-22 94.0
Msa0083330 MtrunA17_Chr5g0396741 40.000 210 82 7 340 506 112 320 4.92e-22 97.1
Msa0083330 MtrunA17_Chr1g0150661 47.778 90 39 1 343 424 33 122 5.18e-22 94.7
Msa0083330 MtrunA17_Chr1g0150671 45.918 98 48 2 310 407 16 108 1.33e-21 94.7
Msa0083330 MtrunA17_Chr7g0275841 52.055 73 35 0 330 402 13 85 1.36e-21 92.0
Msa0083330 MtrunA17_Chr1g0150631 43.137 102 57 1 328 428 21 122 1.41e-21 93.6
Msa0083330 MtrunA17_Chr1g0150691 39.316 117 63 1 328 436 5 121 1.67e-21 93.2
Msa0083330 MtrunA17_Chr3g0126321 47.573 103 50 2 342 440 110 212 1.94e-21 95.9
Msa0083330 MtrunA17_Chr4g0055761 64.706 68 23 1 335 401 135 202 3.32e-21 93.6
Msa0083330 MtrunA17_Chr4g0044871 65.152 66 19 1 345 406 96 161 6.89e-21 91.7
Msa0083330 MtrunA17_Chr2g0295421 59.701 67 27 0 340 406 91 157 7.39e-21 92.0
Msa0083330 MtrunA17_Chr1g0212301 46.667 90 47 1 8 97 117 205 1.09e-20 90.9
Msa0083330 MtrunA17_Chr4g0002631 56.250 80 34 1 345 424 8 86 1.22e-20 89.7
Msa0083330 MtrunA17_Chr4g0063751 66.102 59 20 0 343 401 5 63 1.22e-20 90.5
Msa0083330 MtrunA17_Chr2g0333011 66.102 59 20 0 343 401 5 63 1.46e-20 89.0
Msa0083330 MtrunA17_Chr4g0003421 62.903 62 23 0 340 401 35 96 1.66e-20 90.9
Msa0083330 MtrunA17_Chr4g0023411 61.667 60 23 0 345 404 65 124 1.80e-20 89.4
Msa0083330 MtrunA17_Chr5g0437371 76.364 55 13 0 345 399 66 120 2.08e-20 92.4
Msa0083330 MtrunA17_Chr3g0137174 56.790 81 34 1 345 425 8 87 2.18e-20 89.0
Msa0083330 MtrunA17_Chr7g0257911 56.250 80 26 2 334 404 11 90 2.26e-20 91.3
Msa0083330 MtrunA17_Chr4g0044911 70.175 57 17 0 345 401 96 152 3.38e-20 89.7
Msa0083330 MtrunA17_Chr8g0383591 67.797 59 19 0 343 401 143 201 3.42e-20 91.3
Msa0083330 MtrunA17_Chr1g0195151 59.420 69 27 1 334 402 67 134 3.54e-20 91.3
Msa0083330 MtrunA17_Chr4g0044901 62.687 67 21 1 345 407 96 162 5.78e-20 89.0
Msa0083330 MtrunA17_Chr8g0375031 62.903 62 23 0 339 400 119 180 6.90e-20 88.6
Msa0083330 MtrunA17_Chr8g0335311 65.000 60 20 1 345 403 96 155 7.01e-20 87.8
Msa0083330 MtrunA17_Chr8g0335331 46.392 97 51 1 308 403 88 184 8.29e-20 87.8
Msa0083330 MtrunA17_Chr4g0017851 62.069 58 22 0 344 401 117 174 9.68e-20 90.1
Msa0083330 MtrunA17_Chr3g0134161 40.541 111 53 2 343 440 43 153 9.72e-20 86.7
Msa0083330 MtrunA17_Chr2g0301191 57.627 59 25 0 344 402 18 76 9.93e-20 87.8
Msa0083330 MtrunA17_Chr4g0044881 68.421 57 18 0 345 401 114 170 2.31e-19 87.4
Msa0083330 MtrunA17_Chr7g0232261 57.812 64 27 0 340 403 56 119 2.52e-19 87.0
Msa0083330 MtrunA17_Chr4g0026881 57.971 69 27 2 334 401 87 154 2.54e-19 87.4
Msa0083330 MtrunA17_Chr1g0158971 45.000 100 47 2 343 440 113 206 3.13e-19 89.0
Msa0083330 MtrunA17_Chr7g0265851 59.677 62 25 0 341 402 20 81 3.37e-19 85.9
Msa0083330 MtrunA17_Chr5g0401871 51.282 78 30 1 343 420 23 92 3.76e-19 85.1
Msa0083330 MtrunA17_Chr6g0486701 61.667 60 23 0 344 403 43 102 3.89e-19 86.3
Msa0083330 MtrunA17_Chr2g0301171 45.882 85 42 1 344 428 18 98 5.07e-19 85.5
Msa0083330 MtrunA17_Chr2g0331231 53.125 64 30 0 344 407 40 103 5.27e-19 85.5
Msa0083330 MtrunA17_Chr7g0250721 42.636 129 62 5 278 403 1 120 5.66e-19 85.5
Msa0083330 MtrunA17_Chr4g0046161 46.154 91 42 2 313 402 31 115 5.76e-19 82.8
Msa0083330 MtrunA17_Chr3g0140161 32.353 170 87 5 340 504 38 184 6.78e-19 84.7
Msa0083330 MtrunA17_Chr5g0399441 49.351 77 37 1 339 413 20 96 7.03e-19 84.3
Msa0083330 MtrunA17_Chr8g0340311 55.556 63 28 0 345 407 47 109 7.86e-19 85.1
Msa0083330 MtrunA17_Chr1g0153151 59.016 61 25 0 343 403 42 102 8.91e-19 84.0
Msa0083330 MtrunA17_Chr2g0323171 61.017 59 23 0 345 403 65 123 1.58e-18 83.6
Msa0083330 MtrunA17_Chr2g0334031 60.656 61 24 0 341 401 113 173 1.66e-18 87.4
Msa0083330 MtrunA17_Chr3g0136551 60.345 58 23 0 343 400 63 120 1.69e-18 85.5
Msa0083330 MtrunA17_Chr5g0437671 61.017 59 23 0 345 403 85 143 1.78e-18 87.4
Msa0083330 MtrunA17_Chr1g0189941 64.286 56 20 0 345 400 24 79 2.29e-18 82.4
Msa0083330 MtrunA17_Chr7g0250731 61.290 62 23 1 343 403 59 120 2.51e-18 83.6
Msa0083330 MtrunA17_Chr4g0055951 55.556 63 28 0 345 407 74 136 2.59e-18 84.7
Msa0083330 MtrunA17_Chr8g0344961 60.656 61 24 0 341 401 120 180 2.68e-18 86.7
Msa0083330 MtrunA17_Chr2g0316931 55.224 67 30 0 345 411 31 97 3.03e-18 83.2
Msa0083330 MtrunA17_Chr2g0283171 61.667 60 22 1 343 401 61 120 3.26e-18 82.0
Msa0083330 MtrunA17_Chr4g0055781 53.165 79 31 2 345 422 102 175 4.28e-18 84.0
Msa0083330 MtrunA17_Chr5g0396911 64.407 59 21 0 342 400 109 167 5.02e-18 85.1
Msa0083330 MtrunA17_Chr7g0250711 41.085 129 63 5 277 403 2 119 5.15e-18 82.8
Msa0083330 MtrunA17_Chr8g0390091 58.333 60 25 0 344 403 36 95 6.07e-18 83.2
Msa0083330 MtrunA17_Chr8g0335321 58.065 62 25 1 343 403 94 155 6.33e-18 82.4
Msa0083330 MtrunA17_Chr4g0062551 56.667 60 26 0 343 402 51 110 6.74e-18 80.5
Msa0083330 MtrunA17_Chr1g0196871 54.930 71 29 2 332 401 5 73 7.25e-18 79.0
Msa0083330 MtrunA17_Chr2g0282651 57.143 63 27 0 339 401 64 126 8.26e-18 83.2
Msa0083330 MtrunA17_Chr1g0186731 64.407 59 20 1 345 402 21 79 8.72e-18 80.1
Msa0083330 MtrunA17_Chr8g0387801 43.396 106 52 3 331 434 95 194 1.06e-17 84.0
Msa0083330 MtrunA17_Chr2g0301181 54.237 59 27 0 344 402 18 76 1.11e-17 82.4
Msa0083330 MtrunA17_Chr2g0282621 61.404 57 22 0 345 401 15 71 1.54e-17 80.5
Msa0083330 MtrunA17_Chr3g0099871 43.810 105 44 3 345 434 27 131 2.02e-17 81.3
Msa0083330 MtrunA17_Chr4g0008781 35.052 97 61 1 8 104 120 214 2.42e-17 81.3
Msa0083330 MtrunA17_Chr5g0438801 49.351 77 37 1 333 407 37 113 2.42e-17 82.4
Msa0083330 MtrunA17_Chr4g0062161 56.667 60 26 0 343 402 51 110 3.00e-17 80.5
Msa0083330 MtrunA17_Chr6g0483141 38.542 96 57 1 9 104 116 209 3.48e-17 80.9
Msa0083330 MtrunA17_Chr7g0225131 48.000 75 36 1 328 402 12 83 3.63e-17 76.6
Msa0083330 MtrunA17_Chr8g0334801 55.932 59 26 0 345 403 52 110 3.83e-17 80.1
Msa0083330 MtrunA17_Chr3g0136541 61.111 54 21 0 347 400 42 95 4.64e-17 80.9
Msa0083330 MtrunA17_Chr1g0183981 41.593 113 53 4 343 443 73 184 5.34e-17 80.1
Msa0083330 MtrunA17_Chr4g0055801 65.517 58 19 1 345 401 154 211 7.27e-17 81.6
Msa0083330 MtrunA17_Chr1g0184061 57.812 64 26 1 338 400 70 133 7.40e-17 79.7
Msa0083330 MtrunA17_Chr5g0432821 61.404 57 22 0 345 401 124 180 9.77e-17 80.5
Msa0083330 MtrunA17_Chr5g0438831 53.968 63 29 0 345 407 46 108 1.32e-16 80.1
Msa0083330 MtrunA17_Chr1g0184031 42.202 109 50 4 345 441 84 191 1.35e-16 79.0
Msa0083330 MtrunA17_Chr1g0170531 61.667 60 22 1 343 401 87 146 1.66e-16 79.0
Msa0083330 MtrunA17_Chr1g0184011 63.636 55 19 1 347 400 86 140 1.90e-16 78.6
Msa0083330 MtrunA17_Chr2g0283181 41.026 117 63 4 343 457 147 259 3.42e-16 79.3
Msa0083330 MtrunA17_Chr7g0240551 41.000 100 56 2 5 104 117 213 3.67e-16 77.8
Msa0083330 MtrunA17_Chr1g0186671 61.017 59 22 1 345 402 19 77 4.28e-16 75.1
Msa0083330 MtrunA17_Chr1g0203861 55.556 63 28 0 340 402 39 101 4.30e-16 77.0
Msa0083330 MtrunA17_Chr5g0396301 53.968 63 27 1 343 403 16 78 7.09e-16 75.5
Msa0083330 MtrunA17_Chr8g0367911 57.143 56 24 0 345 400 44 99 7.74e-16 78.2
Msa0083330 MtrunA17_Chr4g0026931 39.423 104 60 2 343 443 129 232 1.12e-15 77.4
Msa0083330 MtrunA17_Chr1g0184071 47.561 82 37 2 345 420 69 150 1.13e-15 75.1
Msa0083330 MtrunA17_Chr7g0243431 60.317 63 18 1 345 400 78 140 1.26e-15 79.3
Msa0083330 MtrunA17_Chr6g0473961 55.556 63 28 0 340 402 49 111 1.34e-15 75.9
Msa0083330 MtrunA17_Chr6g0473971 55.738 61 27 0 340 400 49 109 1.51e-15 76.3
Msa0083330 MtrunA17_Chr1g0184081 62.712 59 21 1 345 402 21 79 1.57e-15 73.9
Msa0083330 MtrunA17_Chr6g0473941 55.556 63 28 0 340 402 28 90 1.77e-15 75.5
Msa0083330 MtrunA17_Chr4g0008791 40.000 95 54 2 10 104 122 213 1.95e-15 75.5
Msa0083330 MtrunA17_Chr7g0240541 40.000 100 57 2 5 104 117 213 1.95e-15 75.5
Msa0083330 MtrunA17_Chr6g0473931 55.556 63 28 0 340 402 28 90 2.17e-15 74.7
Msa0083330 MtrunA17_Chr5g0412641 57.143 56 24 0 345 400 46 101 2.20e-15 77.8
Msa0083330 MtrunA17_Chr1g0196661 41.935 93 54 0 9 101 116 208 2.32e-15 75.5
Msa0083330 MtrunA17_Chr4g0029341 39.130 92 56 0 10 101 118 209 2.42e-15 75.1
Msa0083330 MtrunA17_Chr6g0473881 53.968 63 29 0 340 402 105 167 2.99e-15 76.6
Msa0083330 MtrunA17_Chr7g0261151 62.069 58 21 1 345 401 20 77 3.37e-15 72.8
Msa0083330 MtrunA17_Chr6g0473741 53.968 63 29 0 340 402 61 123 3.80e-15 75.1
Msa0083330 MtrunA17_Chr7g0261101 61.017 59 22 1 345 402 20 78 3.81e-15 72.8
Msa0083330 MtrunA17_Chr7g0217991 44.144 111 56 2 343 452 40 145 3.91e-15 77.8
Msa0083330 MtrunA17_Chr7g0252381 55.932 59 26 0 342 400 39 97 4.67e-15 75.5
Msa0083330 MtrunA17_Chr1g0186681 56.667 60 24 1 345 402 19 78 5.12e-15 72.0
Msa0083330 MtrunA17_Chr6g0473981 53.968 63 29 0 340 402 49 111 5.27e-15 74.7
Msa0083330 MtrunA17_Chr6g0473781 53.968 63 29 0 340 402 52 114 5.63e-15 74.3
Msa0083330 MtrunA17_Chr1g0146191 59.016 61 25 0 344 404 46 106 7.64e-15 74.7
Msa0083330 MtrunA17_Chr7g0253424 58.065 62 24 1 345 406 39 98 7.71e-15 74.7
Msa0083330 MtrunA17_Chr7g0240581 36.000 100 61 1 5 104 117 213 8.19e-15 73.9
Msa0083330 MtrunA17_Chr7g0240681 35.354 99 61 2 6 104 119 214 9.08e-15 73.6
Msa0083330 MtrunA17_Chr6g0486711 50.000 82 38 1 344 422 48 129 1.28e-14 73.6
Msa0083330 MtrunA17_Chr4g0066931 55.357 56 25 0 345 400 53 108 1.39e-14 75.1
Msa0083330 MtrunA17_Chr6g0473861 53.968 63 29 0 340 402 58 120 1.45e-14 74.3
Msa0083330 MtrunA17_Chr6g0453661 60.345 58 23 0 343 400 36 93 1.50e-14 75.5
Msa0083330 MtrunA17_Chr2g0297331 56.716 67 28 1 337 402 6 72 1.84e-14 70.5
Msa0083330 MtrunA17_Chr2g0286161 55.357 56 25 0 345 400 50 105 1.91e-14 73.9
Msa0083330 MtrunA17_Chr7g0240561 37.000 100 60 2 5 104 117 213 1.98e-14 72.8
Msa0083330 MtrunA17_Chr6g0474001 54.098 61 28 0 340 400 49 109 2.03e-14 73.6
Msa0083330 MtrunA17_Chr7g0261181 42.982 114 47 3 345 453 13 113 2.24e-14 70.1
Msa0083330 MtrunA17_Chr3g0137831 61.905 63 24 0 343 405 6 68 3.00e-14 71.6
Msa0083330 MtrunA17_Chr8g0378811 53.731 67 30 1 345 411 55 120 3.41e-14 72.8
Msa0083330 MtrunA17_Chr1g0196711 37.895 95 59 0 10 104 117 211 3.52e-14 72.0
Msa0083330 MtrunA17_Chr1g0149331 64.912 57 20 0 345 401 7 63 4.11e-14 71.2
Msa0083330 MtrunA17_Chr5g0396191 58.730 63 26 0 345 407 11 73 4.99e-14 70.5
Msa0083330 MtrunA17_Chr8g0350701 56.897 58 25 0 343 400 25 82 5.37e-14 72.8
Msa0083330 MtrunA17_Chr7g0240531 39.000 100 58 2 5 104 117 213 6.58e-14 71.2
Msa0083330 MtrunA17_Chr7g0240631 33.000 100 64 2 5 104 117 213 6.82e-14 71.2
Msa0083330 MtrunA17_Chr2g0321071 52.308 65 29 2 340 402 42 106 9.11e-14 70.9
Msa0083330 MtrunA17_Chr1g0196691 38.710 93 57 0 9 101 142 234 1.31e-13 70.9
Msa0083330 MtrunA17_Chr6g0461271 42.991 107 54 3 332 434 21 124 1.36e-13 71.6
Msa0083330 MtrunA17_Chr4g0057241 56.452 62 26 1 341 402 11 71 2.57e-13 68.2
Msa0083330 MtrunA17_Chr1g0196721 38.710 93 57 0 9 101 115 207 2.98e-13 69.3
Msa0083330 MtrunA17_Chr1g0200931 46.479 71 35 2 341 408 19 89 3.38e-13 67.0
Msa0083330 MtrunA17_Chr5g0398081 47.761 67 29 1 340 400 44 110 4.10e-13 68.9
Msa0083330 MtrunA17_Chr3g0131601 63.934 61 22 0 341 401 72 132 4.53e-13 69.3
Msa0083330 MtrunA17_Chr5g0396171 46.774 62 33 0 347 408 26 87 4.64e-13 65.1
Msa0083330 MtrunA17_Chr1g0170471 62.000 50 18 1 353 401 91 140 5.02e-13 67.4
Msa0083330 MtrunA17_Chr8g0379561 37.634 93 56 1 9 101 119 209 5.89e-13 68.6
Msa0083330 MtrunA17_Chr1g0155751 64.407 59 21 0 345 403 39 97 7.03e-13 68.9
Msa0083330 MtrunA17_Chr6g0473771 44.156 77 36 1 333 402 24 100 7.15e-13 65.5
Msa0083330 MtrunA17_Chr5g0398091 38.776 98 50 2 340 427 49 146 8.01e-13 68.2
Msa0083330 MtrunA17_Chr7g0240641 34.000 100 63 2 5 104 117 213 9.34e-13 67.8
Msa0083330 MtrunA17_Chr3g0129421 60.606 66 26 0 336 401 161 226 9.64e-13 69.7
Msa0083330 MtrunA17_Chr3g0132581 39.024 82 48 1 21 102 130 209 1.27e-12 67.4
Msa0083330 MtrunA17_Chr5g0398061 38.776 98 50 2 340 427 44 141 1.50e-12 67.0
Msa0083330 MtrunA17_Chr3g0142081 56.923 65 28 0 345 409 39 103 3.19e-12 66.2
Msa0083330 MtrunA17_Chr1g0183961 62.712 59 21 1 345 402 27 85 4.82e-12 63.9
Msa0083330 MtrunA17_Chr3g0083501 43.056 72 41 0 353 424 3 74 5.26e-12 61.6
Msa0083330 MtrunA17_Chr1g0183931 50.000 82 38 2 328 408 84 163 6.64e-12 65.9
Msa0083330 MtrunA17_Chr4g0042761 53.448 58 27 0 343 400 46 103 7.90e-12 66.6
Msa0083330 MtrunA17_Chr8g0379581 41.111 90 51 1 9 98 118 205 1.12e-11 64.7
Msa0083330 MtrunA17_Chr7g0240511 36.000 100 56 3 5 104 117 208 1.20e-11 64.3
Msa0083330 MtrunA17_Chr7g0261171 43.396 106 49 3 343 439 83 186 1.36e-11 64.7
Msa0083330 MtrunA17_Chr6g0473791 51.852 54 26 0 340 393 52 105 1.41e-11 62.4
Msa0083330 MtrunA17_Chr1g0186741 61.667 60 22 1 343 401 71 130 2.71e-11 63.2
Msa0083330 MtrunA17_Chr5g0396181 52.542 59 28 0 345 403 21 79 3.30e-11 62.8
Msa0083330 MtrunA17_Chr6g0461941 59.722 72 28 1 333 403 7 78 4.89e-11 62.4
Msa0083330 MtrunA17_Chr3g0114761 55.738 61 25 1 343 401 23 83 5.21e-11 62.4
Msa0083330 MtrunA17_Chr5g0424051 56.452 62 26 1 341 401 92 153 5.75e-11 63.5
Msa0083330 MtrunA17_Chr7g0261201 57.143 63 26 1 340 401 93 155 6.16e-11 62.8
Msa0083330 MtrunA17_Chr7g0240691 30.928 97 64 2 8 104 151 244 7.10e-11 62.8
Msa0083330 MtrunA17_Chr1g0167781 37.681 138 77 4 272 400 1 138 7.80e-11 62.0
Msa0083330 MtrunA17_Chr4g0057231 40.385 104 47 4 314 402 1 104 9.38e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0083330 AT4G13620.1 38.771 423 150 17 105 504 46 382 3.56e-68 224
Msa0083330 AT1G22190.1 62.500 96 32 1 343 438 81 172 1.29e-35 134
Msa0083330 AT4G39780.1 47.239 163 63 6 281 431 31 182 2.18e-35 133
Msa0083330 AT1G78080.1 47.260 146 53 4 343 481 150 278 1.90e-34 132
Msa0083330 AT2G22200.1 64.773 88 26 2 344 431 70 152 1.19e-31 123
Msa0083330 AT1G36060.1 61.798 89 30 1 343 427 141 229 1.80e-31 124
Msa0083330 AT2G20880.1 77.049 61 14 0 343 403 185 245 5.58e-27 112
Msa0083330 AT5G65130.2 55.294 85 35 1 343 427 111 192 7.12e-27 110
Msa0083330 AT5G65130.1 55.294 85 35 1 343 427 109 190 7.91e-27 110
Msa0083330 AT3G16770.1 45.192 104 53 1 302 405 40 139 1.17e-24 103
Msa0083330 AT4G28140.1 63.768 69 23 1 343 411 141 207 7.84e-24 102
Msa0083330 AT3G50260.1 45.370 108 55 1 341 444 17 124 2.43e-23 96.7
Msa0083330 AT2G33710.1 57.534 73 31 0 329 401 54 126 1.39e-21 93.6
Msa0083330 AT2G33710.2 61.538 65 25 0 337 401 62 126 1.39e-21 94.0
Msa0083330 AT5G13330.1 60.294 68 27 0 334 401 28 95 2.47e-21 92.8
Msa0083330 AT4G11140.1 69.492 59 18 0 343 401 85 143 2.73e-21 94.4
Msa0083330 AT5G25190.1 56.790 81 34 1 345 425 8 87 3.29e-21 91.7
Msa0083330 AT2G47520.1 55.405 74 33 0 341 414 46 119 3.37e-21 91.3
Msa0083330 AT2G23340.1 48.387 93 45 1 336 425 16 108 4.42e-21 90.9
Msa0083330 AT4G36900.1 61.905 63 24 0 341 403 26 88 4.79e-21 91.7
Msa0083330 AT1G15360.1 66.102 59 20 0 343 401 5 63 7.65e-21 90.9
Msa0083330 AT1G15360.2 66.102 59 20 0 343 401 5 63 7.65e-21 90.9
Msa0083330 AT1G64380.1 56.311 103 40 1 341 438 132 234 1.06e-20 93.6
Msa0083330 AT1G19210.1 56.061 66 29 0 345 410 12 77 1.60e-20 89.7
Msa0083330 AT4G17500.1 60.811 74 25 2 332 401 132 205 1.71e-20 91.7
Msa0083330 AT5G61890.1 63.934 61 22 0 341 401 86 146 2.06e-20 90.9
Msa0083330 AT1G71450.1 41.176 119 60 2 345 453 24 142 2.28e-20 89.4
Msa0083330 AT2G44840.1 62.500 64 23 1 341 403 88 151 2.50e-20 90.1
Msa0083330 AT5G67190.1 60.317 63 25 0 341 403 17 79 3.98e-20 88.6
Msa0083330 AT4G27950.1 56.164 73 32 0 328 400 101 173 4.72e-20 91.7
Msa0083330 AT1G01250.1 59.677 62 25 0 340 401 40 101 8.02e-20 87.8
Msa0083330 AT1G74930.1 60.345 58 23 0 345 402 21 78 8.18e-20 87.8
Msa0083330 AT5G21960.1 49.383 81 40 1 345 424 7 87 8.18e-20 88.6
Msa0083330 AT5G25390.2 57.746 71 26 1 343 413 5 71 9.17e-20 87.8
Msa0083330 AT5G47220.1 66.129 62 20 1 341 401 113 174 9.73e-20 89.0
Msa0083330 AT4G06746.1 51.948 77 37 0 325 401 16 92 1.03e-19 86.3
Msa0083330 AT5G25810.1 51.389 72 35 0 332 403 23 94 1.64e-19 87.8
Msa0083330 AT2G35700.1 59.016 61 25 0 345 405 45 105 1.87e-19 87.0
Msa0083330 AT3G23230.1 69.492 59 17 1 345 402 20 78 2.73e-19 84.7
Msa0083330 AT4G31060.1 33.333 168 93 5 343 501 25 182 2.99e-19 86.3
Msa0083330 AT4G16750.1 59.016 61 25 0 345 405 40 100 3.04e-19 85.9
Msa0083330 AT5G53290.1 67.241 58 19 0 343 400 123 180 3.92e-19 89.4
Msa0083330 AT3G57600.1 62.295 61 23 0 345 405 28 88 3.98e-19 87.8
Msa0083330 AT3G16280.1 60.000 60 24 0 344 403 60 119 7.55e-19 86.3
Msa0083330 AT3G16280.2 60.000 60 24 0 344 403 78 137 8.88e-19 86.7
Msa0083330 AT2G36450.1 61.538 65 24 1 339 402 9 73 1.21e-18 84.3
Msa0083330 AT1G72360.1 52.632 76 33 1 327 402 10 82 1.22e-18 85.1
Msa0083330 AT4G32800.1 50.704 71 35 0 337 407 11 81 1.33e-18 85.1
Msa0083330 AT5G44210.1 64.912 57 20 0 345 401 33 89 1.90e-18 84.3
Msa0083330 AT5G11590.1 41.441 111 54 3 301 403 2 109 2.04e-18 85.1
Msa0083330 AT3G15210.1 61.017 59 23 0 345 403 25 83 2.23e-18 84.7
Msa0083330 AT5G43410.1 62.712 59 21 1 345 402 15 73 4.85e-18 80.9
Msa0083330 AT2G44940.1 55.385 65 29 0 339 403 94 158 4.92e-18 85.1
Msa0083330 AT3G11020.1 68.421 57 18 0 345 401 78 134 5.16e-18 85.5
Msa0083330 AT1G46768.3 55.072 69 30 1 335 403 22 89 7.71e-18 80.5
Msa0083330 AT1G46768.1 55.072 69 30 1 335 403 22 89 8.94e-18 80.9
Msa0083330 AT1G46768.2 55.072 69 30 1 335 403 22 89 8.94e-18 80.9
Msa0083330 AT2G25820.1 54.688 64 29 0 344 407 25 88 1.01e-17 82.8
Msa0083330 AT1G21910.1 59.649 57 23 0 345 401 50 106 1.10e-17 82.8
Msa0083330 AT4G25470.1 58.730 63 26 0 340 402 46 108 1.12e-17 82.4
Msa0083330 AT1G28360.1 60.345 58 23 0 345 402 12 69 1.17e-17 81.6
Msa0083330 AT5G05410.2 64.912 57 20 0 345 401 79 135 1.17e-17 84.0
Msa0083330 AT4G25490.1 58.730 63 26 0 340 402 43 105 1.25e-17 82.0
Msa0083330 AT1G75490.1 63.158 57 21 0 345 401 42 98 1.28e-17 82.0
Msa0083330 AT5G05410.1 64.912 57 20 0 345 401 79 135 1.71e-17 84.3
Msa0083330 AT2G46310.1 64.286 56 20 0 345 400 99 154 1.91e-17 83.2
Msa0083330 AT5G25390.1 56.338 71 24 2 343 413 5 68 1.97e-17 80.9
Msa0083330 AT2G40340.2 46.154 78 42 0 345 422 14 91 2.20e-17 82.8
Msa0083330 AT2G40340.5 46.154 78 42 0 345 422 14 91 2.20e-17 82.8
Msa0083330 AT2G40340.4 46.154 78 42 0 345 422 14 91 2.20e-17 82.8
Msa0083330 AT1G72360.2 62.069 58 22 0 345 402 76 133 2.31e-17 82.4
Msa0083330 AT1G72360.3 62.069 58 22 0 345 402 74 131 2.39e-17 82.4
Msa0083330 AT3G61630.1 65.517 58 20 0 343 400 103 160 2.48e-17 83.6
Msa0083330 AT4G25480.1 57.143 63 27 0 340 402 46 108 3.03e-17 81.3
Msa0083330 AT3G60490.1 53.968 63 29 0 345 407 71 133 3.39e-17 82.0
Msa0083330 AT2G40340.3 46.154 78 42 0 345 422 72 149 3.47e-17 82.8
Msa0083330 AT4G23750.2 63.793 58 21 0 343 400 120 177 4.26e-17 83.2
Msa0083330 AT4G23750.1 63.793 58 21 0 343 400 120 177 4.26e-17 83.2
Msa0083330 AT3G23240.1 62.712 59 21 1 343 400 80 138 4.85e-17 80.5
Msa0083330 AT2G40340.1 46.154 78 42 0 345 422 72 149 4.88e-17 82.8
Msa0083330 AT2G40340.6 46.154 78 42 0 345 422 79 156 5.29e-17 82.8
Msa0083330 AT3G20310.1 61.404 57 22 0 345 401 27 83 9.85e-17 80.1
Msa0083330 AT5G07580.1 45.000 100 52 2 329 425 94 193 1.02e-16 79.3
Msa0083330 AT5G47230.1 65.000 60 20 1 343 401 154 213 1.62e-16 80.9
Msa0083330 AT1G50640.1 61.404 57 22 0 345 401 28 84 1.64e-16 79.3
Msa0083330 AT5G13910.1 55.072 69 28 1 332 400 10 75 2.85e-16 78.2
Msa0083330 AT5G51990.1 57.377 61 26 0 340 400 49 109 5.11e-16 77.8
Msa0083330 AT2G40350.1 54.237 59 27 0 345 403 67 125 5.21e-16 75.9
Msa0083330 AT1G22810.1 54.098 61 26 1 345 403 14 74 5.28e-16 75.5
Msa0083330 AT2G31230.1 60.345 58 22 1 345 401 86 143 5.33e-16 78.2
Msa0083330 AT1G22985.1 62.295 61 20 1 343 400 73 133 5.36e-16 75.9
Msa0083330 AT5G18450.1 42.727 110 53 3 345 444 34 143 7.28e-16 79.0
Msa0083330 AT2G40350.2 54.237 59 27 0 345 403 74 132 7.38e-16 75.9
Msa0083330 AT1G71520.1 35.398 113 68 2 345 452 14 126 8.05e-16 75.1
Msa0083330 AT1G28370.1 50.685 73 35 1 330 401 4 76 9.20e-16 75.5
Msa0083330 AT4G17490.1 65.517 58 19 1 345 401 137 194 1.08e-15 77.8
Msa0083330 AT1G71130.1 51.899 79 25 2 327 400 69 139 1.16e-15 75.1
Msa0083330 AT1G03800.1 56.140 57 25 0 345 401 53 109 1.25e-15 77.0
Msa0083330 AT5G19790.1 54.667 75 32 1 330 402 5 79 1.39e-15 77.0
Msa0083330 AT1G28370.2 55.000 60 27 0 342 401 55 114 1.40e-15 75.9
Msa0083330 AT5G51190.1 60.345 58 22 1 345 401 72 129 1.68e-15 76.3
Msa0083330 AT3G09270.1 41.304 92 52 1 12 103 124 213 2.70e-15 75.5
Msa0083330 AT1G12980.1 50.725 69 34 0 339 407 51 119 3.23e-15 77.4
Msa0083330 AT1G24590.1 57.143 56 24 0 345 400 58 113 7.11e-15 75.9
Msa0083330 AT5G18560.1 52.174 69 30 1 345 410 55 123 1.09e-14 75.9
Msa0083330 AT5G61600.1 56.897 58 24 1 345 401 88 145 1.17e-14 74.3
Msa0083330 AT5G11190.1 57.534 73 25 1 345 411 7 79 1.19e-14 72.8
Msa0083330 AT1G43160.1 63.014 73 25 1 341 411 57 129 1.25e-14 72.8
Msa0083330 AT1G28160.1 57.143 56 24 0 345 400 39 94 1.43e-14 73.9
Msa0083330 AT5G07310.1 63.934 61 22 0 341 401 88 148 1.71e-14 73.9
Msa0083330 AT4G18450.1 49.367 79 37 3 337 413 102 179 3.08e-14 73.9
Msa0083330 AT1G12890.1 55.357 56 25 0 345 400 21 76 7.37e-14 71.2
Msa0083330 AT1G77200.1 59.322 59 24 0 345 403 43 101 1.24e-13 71.2
Msa0083330 AT1G63030.2 52.459 61 29 0 340 400 25 85 1.60e-13 69.3
Msa0083330 AT1G63030.1 52.459 61 29 0 340 400 25 85 1.60e-13 69.3
Msa0083330 AT2G40220.1 73.214 56 15 0 345 400 55 110 1.90e-13 72.0
Msa0083330 AT5G64750.1 59.016 61 24 1 352 411 192 252 2.59e-13 72.0
Msa0083330 AT4G34410.1 61.194 67 26 0 345 411 136 202 3.13e-13 70.5
Msa0083330 AT5G50080.1 56.164 73 32 0 329 401 61 133 3.48e-13 69.3
Msa0083330 AT5G50080.2 56.164 73 32 0 329 401 70 142 3.70e-13 69.3
Msa0083330 AT1G12610.1 47.619 63 33 0 340 402 25 87 4.80e-13 68.6
Msa0083330 AT1G77640.1 59.016 61 25 0 343 403 41 101 9.88e-13 68.6
Msa0083330 AT2G29420.1 40.000 90 52 1 9 98 122 209 1.10e-12 68.2
Msa0083330 AT1G33760.1 61.017 59 23 0 345 403 20 78 1.93e-12 66.2
Msa0083330 AT1G68550.1 71.795 39 11 0 347 385 115 153 2.04e-12 68.6
Msa0083330 AT1G68550.2 71.795 39 11 0 347 385 115 153 2.04e-12 68.6
Msa0083330 AT5G52020.1 39.062 128 65 5 339 464 57 173 1.05e-11 65.1
Msa0083330 AT2G38340.1 56.923 65 20 1 345 401 70 134 1.21e-11 65.5
Msa0083330 AT1G53910.1 55.405 74 31 1 341 412 121 194 1.81e-11 66.2
Msa0083330 AT1G53910.2 55.405 74 31 1 341 412 121 194 1.81e-11 66.2
Msa0083330 AT1G53910.3 55.405 74 31 1 341 412 119 192 1.94e-11 65.9
Msa0083330 AT3G23220.1 59.091 66 26 1 338 402 7 72 3.81e-11 61.6
Msa0083330 AT1G44830.1 56.250 64 27 1 341 403 31 94 4.29e-11 63.2
Msa0083330 AT3G14230.3 58.462 65 27 0 341 405 119 183 4.38e-11 65.1
Msa0083330 AT3G14230.2 58.462 65 27 0 341 405 120 184 4.53e-11 65.1
Msa0083330 AT3G14230.1 58.462 65 27 0 341 405 124 188 4.91e-11 65.1

Find 92 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACAGAATCCAAGTATT+TGG 0.234174 1_2:+62427230 Msa0083330:CDS
CATTTCCCCACCTTCACTCT+TGG 0.265735 1_2:+62422884 Msa0083330:CDS
TGATTAACTAAAGTGGTTAA+AGG 0.280047 1_2:-62427348 None:intergenic
TGAATCACATGCTTTAGATT+TGG 0.288999 1_2:-62428047 None:intergenic
ATATCTGAGGCTAAGACATT+AGG 0.307926 1_2:-62427462 None:intergenic
CTCTTGGGTCAAGAATTTCT+TGG 0.313611 1_2:+62422900 Msa0083330:CDS
CCAAGTCTTTCAATGAGAAT+TGG 0.319046 1_2:+62427805 Msa0083330:CDS
CAGACCCTAGTCCTGTTTCT+TGG 0.319383 1_2:-62427933 None:intergenic
CTTTAGATATGGATATCATT+TGG 0.331832 1_2:+62428327 Msa0083330:CDS
ACATATCCTATGTCTCAATT+TGG 0.334467 1_2:+62427699 Msa0083330:CDS
AAAGTCAAGTTTGGAGATTT+CGG 0.337697 1_2:-62427594 None:intergenic
TGATGATCATTGAACTTTGC+AGG 0.341653 1_2:-62427375 None:intergenic
CCTCTTGTACCATACTTCAT+AGG 0.343306 1_2:-62427849 None:intergenic
ATAAAGGAGTTGAAGGTTGC+AGG 0.348799 1_2:+62428227 Msa0083330:CDS
TTCATTGGTGGCAACACAAT+TGG 0.349905 1_2:+62422775 Msa0083330:CDS
GGAAATGGGTTGCTGAAATT+AGG 0.358324 1_2:+62427907 Msa0083330:CDS
AATTGTATCCTCCAAATACT+TGG 0.361892 1_2:-62427241 None:intergenic
TTGTGTAAAGATTTCCATCT+TGG 0.363895 1_2:-62427175 None:intergenic
CTTCATAGGTTGAGTCTTTG+TGG 0.367716 1_2:-62427835 None:intergenic
ATTTCCCCACCTTCACTCTT+GGG 0.369745 1_2:+62422885 Msa0083330:CDS
AGAGTTTCCAAAAGATTTAG+AGG 0.384387 1_2:-62427501 None:intergenic
TTTGTTGATGATGTTGAGTT+AGG 0.386405 1_2:-62427722 None:intergenic
AGGGGTGAGGCAGAGACATT+GGG 0.389274 1_2:+62427884 Msa0083330:CDS
ATTCAAGCAAATTCATTGAA+TGG 0.390014 1_2:+62428065 Msa0083330:CDS
CATCAGAAAGGTTAAACAAT+AGG 0.390473 1_2:+62428168 Msa0083330:CDS
CCAATTCTCATTGAAAGACT+TGG 0.390982 1_2:-62427805 None:intergenic
TAGAATGCCATCTTTAGATA+TGG 0.395008 1_2:+62428316 Msa0083330:CDS
TGGAAAGGATGAAAGTATAA+AGG 0.402974 1_2:+62428211 Msa0083330:CDS
AATAGAATTGAACTCAGAAA+TGG 0.413468 1_2:-62427433 None:intergenic
GAGATCAATAAAAGAAACTT+TGG 0.416167 1_2:+62422705 Msa0083330:CDS
ACTGTCTAAAAGGATCTATA+TGG 0.417000 1_2:+62427140 Msa0083330:intron
AAGACTCAACCTATGAAGTA+TGG 0.422712 1_2:+62427840 Msa0083330:CDS
AACAGGACTAGGGTCTGGTT+AGG 0.426277 1_2:+62427939 Msa0083330:CDS
TGTGTAAAGATTTCCATCTT+GGG 0.432361 1_2:-62427174 None:intergenic
ATATGCAATTGCAGCATCTT+CGG 0.433502 1_2:-62427976 None:intergenic
GATGGAAATCTTTACACAAA+AGG 0.449641 1_2:+62427179 Msa0083330:CDS
AAATTAGGCTACCAAGAAAC+AGG 0.453786 1_2:+62427922 Msa0083330:CDS
TGAAAGTATAAAGGAGTTGA+AGG 0.465827 1_2:+62428220 Msa0083330:CDS
GGATTGGCAGACATAGCCTT+AGG 0.466349 1_2:+62422796 Msa0083330:CDS
AAGGGGTGAGGCAGAGACAT+TGG 0.474365 1_2:+62427883 Msa0083330:CDS
AATTGAACTCAGAAATGGAT+TGG 0.479216 1_2:-62427428 None:intergenic
GGAAGATACATTTCCCAAGA+TGG 0.485439 1_2:+62427161 Msa0083330:CDS
CCAGTCATGGAAGAAATTGT+TGG 0.492761 1_2:+62422838 Msa0083330:CDS
TGGCAGACATAGCCTTAGGT+TGG 0.497374 1_2:+62422800 Msa0083330:CDS
GTTAGGCCAAATTGAGACAT+AGG 0.499100 1_2:-62427705 None:intergenic
AAATTGAGACATAGGATATG+TGG 0.503840 1_2:-62427697 None:intergenic
AACTTTGAGAGTGATTGAAA+AGG 0.504867 1_2:+62422729 Msa0083330:CDS
ACGATTCAAACAAAATGGAC+AGG 0.504926 1_2:+62427760 Msa0083330:CDS
ACTATTTCTTGAAAACAAGT+TGG 0.510587 1_2:-62427207 None:intergenic
AGAGTGATTGAAAAGGAAAG+TGG 0.513776 1_2:+62422736 Msa0083330:CDS
TGAGGCTAAGACATTAGGAT+TGG 0.514136 1_2:-62427457 None:intergenic
CTTAGTGAAAAGATGTTCAT+TGG 0.515605 1_2:+62422760 Msa0083330:CDS
ATCGGAGCTACGGTTAAAGC+CGG 0.522567 1_2:-62427525 None:intergenic
ACAGCAGCATATATACTAAG+AGG 0.524138 1_2:+62428002 Msa0083330:CDS
CCAACAATTTCTTCCATGAC+TGG 0.525633 1_2:-62422838 None:intergenic
ATGATATCCATATCTAAAGA+TGG 0.526714 1_2:-62428323 None:intergenic
CAAGAAACAGGACTAGGGTC+TGG 0.535110 1_2:+62427934 Msa0083330:CDS
CTCATCAGACATCGGAGCTA+CGG 0.536501 1_2:-62427535 None:intergenic
ACAGGACTAGGGTCTGGTTA+GGG 0.537302 1_2:+62427940 Msa0083330:CDS
AGGTATTTGATTAACTAAAG+TGG 0.538283 1_2:-62427355 None:intergenic
AACAACTGCTTCACTTGTTG+AGG 0.538456 1_2:+62428088 Msa0083330:CDS
GTACTCAACAAGTAGCTCAT+GGG 0.541505 1_2:-62422953 None:intergenic
TGGTGGCAACACAATTGGAT+TGG 0.546011 1_2:+62422780 Msa0083330:CDS
TGCACATACTCTGCCAGTCA+TGG 0.554228 1_2:+62422825 Msa0083330:CDS
AGCAAGGTGATTCATCAGAA+AGG 0.554248 1_2:+62428156 Msa0083330:CDS
GAAGAAGCTAAAGATACTGC+AGG 0.558284 1_2:-62427558 None:intergenic
TCTTGACCCAAGAGTGAAGG+TGG 0.567830 1_2:-62422891 None:intergenic
AACAGAATCCAAGTATTTGG+AGG 0.568479 1_2:+62427233 Msa0083330:CDS
AGTACTCAACAAGTAGCTCA+TGG 0.570685 1_2:-62422954 None:intergenic
CCTATGAAGTATGGTACAAG+AGG 0.573529 1_2:+62427849 Msa0083330:CDS
AGTGAAAAGATGTTCATTGG+TGG 0.577298 1_2:+62422763 Msa0083330:CDS
AGTATGTGCAATCCAACCTA+AGG 0.590838 1_2:-62422812 None:intergenic
GAGTGATTGAAAAGGAAAGT+GGG 0.591381 1_2:+62422737 Msa0083330:CDS
GAGGATACAATTATAAGAAG+AGG 0.591475 1_2:+62427252 Msa0083330:CDS
TCGGAGCTACGGTTAAAGCC+GGG 0.597602 1_2:-62427524 None:intergenic
AATTGAGACATAGGATATGT+GGG 0.599845 1_2:-62427696 None:intergenic
AATTCTTGACCCAAGAGTGA+AGG 0.605291 1_2:-62422894 None:intergenic
TTCTACTTCAATGAAACAAG+AGG 0.610829 1_2:+62427323 Msa0083330:CDS
GTTGATGAGTATAGCATGGA+TGG 0.618667 1_2:-62427630 None:intergenic
TGAAGTTGATGAGTATAGCA+TGG 0.628534 1_2:-62427634 None:intergenic
CTTGACCCAAGAGTGAAGGT+GGG 0.630426 1_2:-62422890 None:intergenic
GGCTACCAAGAAACAGGACT+AGG 0.631241 1_2:+62427928 Msa0083330:CDS
TACTCAACAAGTAGCTCATG+GGG 0.634231 1_2:-62422952 None:intergenic
GCTACCAAGAAACAGGACTA+GGG 0.634530 1_2:+62427929 Msa0083330:CDS
GGGGTGAGGCAGAGACATTG+GGG 0.652356 1_2:+62427885 Msa0083330:CDS
ACAGAATGAGATATGTGATG+TGG 0.662221 1_2:+62428277 Msa0083330:CDS
CTATGAAGTATGGTACAAGA+GGG 0.662911 1_2:+62427850 Msa0083330:CDS
TCAACAAGTAGCTCATGGGG+TGG 0.666333 1_2:-62422949 None:intergenic
TTGACCCAAGAGTGAAGGTG+GGG 0.669984 1_2:-62422889 None:intergenic
ACTGCAGGCTCATCAGACAT+CGG 0.683445 1_2:-62427543 None:intergenic
AAATTACAAGCAATATCACA+AGG 0.717302 1_2:+62428113 Msa0083330:CDS
GGGTGAGGCAGAGACATTGG+GGG 0.726060 1_2:+62427886 Msa0083330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTCATTTATTAATTTTAAA+AGG - chr1_2:62424020-62424039 None:intergenic 10.0%
!! ATGATTTATAAGAAAAAAAT+TGG - chr1_2:62424830-62424849 None:intergenic 10.0%
!! ATAGTATACTATTTATAATA+AGG - chr1_2:62425694-62425713 None:intergenic 10.0%
!!! ATAGAACAATTTTATAAAAA+TGG + chr1_2:62425767-62425786 Msa0083330:intron 10.0%
!! AAAAGAACAAAAAATTCTAA+TGG - chr1_2:62423026-62423045 None:intergenic 15.0%
!!! CTTTTATGTATTAAATAACA+AGG + chr1_2:62423346-62423365 Msa0083330:intron 15.0%
!! ATATTCTCTATATATATAGA+AGG + chr1_2:62423416-62423435 Msa0083330:intron 15.0%
!! TATTCTCTATATATATAGAA+GGG + chr1_2:62423417-62423436 Msa0083330:intron 15.0%
!! CATTTATGTAAAAATTTACA+TGG + chr1_2:62423606-62423625 Msa0083330:intron 15.0%
!!! TATTTTTCTATTTTGATTGT+TGG - chr1_2:62423659-62423678 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTTGTGG+TGG + chr1_2:62424498-62424517 Msa0083330:intron 15.0%
!!! GTAATTAATTGTCATTTTTT+GGG - chr1_2:62424634-62424653 None:intergenic 15.0%
!!! TGTAATTAATTGTCATTTTT+TGG - chr1_2:62424635-62424654 None:intergenic 15.0%
!! AACAAAAGTTAAATTAACTA+AGG + chr1_2:62424726-62424745 Msa0083330:intron 15.0%
!!! TTTTTTTCTTATAAATCATG+AGG + chr1_2:62424831-62424850 Msa0083330:intron 15.0%
!!! TTTTTTCTTATAAATCATGA+GGG + chr1_2:62424832-62424851 Msa0083330:intron 15.0%
!! TTTAATCTATTTCAAATTCA+CGG - chr1_2:62425035-62425054 None:intergenic 15.0%
!!! AAACAAATTTTTTTTTGAGA+GGG - chr1_2:62425178-62425197 None:intergenic 15.0%
!!! ATTTTGATTTCTACTTTTTT+TGG + chr1_2:62425260-62425279 Msa0083330:intron 15.0%
!! TGTTTAATTATTATGCTATT+CGG - chr1_2:62425327-62425346 None:intergenic 15.0%
!! TTACATAACATTATAGTTAA+TGG + chr1_2:62425586-62425605 Msa0083330:intron 15.0%
!! GATTATGTATTAAAAAACTA+AGG + chr1_2:62426253-62426272 Msa0083330:intron 15.0%
!!! TTCATGATTTGTAATTATTT+GGG - chr1_2:62426460-62426479 None:intergenic 15.0%
!!! TTTCATGATTTGTAATTATT+TGG - chr1_2:62426461-62426480 None:intergenic 15.0%
!! ATTACAAATCATGAAAATAA+AGG + chr1_2:62426465-62426484 Msa0083330:intron 15.0%
!! TTTATAAAAATATGACATGT+CGG + chr1_2:62426595-62426614 Msa0083330:intron 15.0%
!! ACATAATAACATAGATAATT+AGG - chr1_2:62426801-62426820 None:intergenic 15.0%
!!! GTTTCATTTGAATTTTTTTA+TGG - chr1_2:62426971-62426990 None:intergenic 15.0%
!!! TTTTTGTTTATAATAGTGAC+CGG - chr1_2:62423093-62423112 None:intergenic 20.0%
!! CACATATATCATTTAATGAA+TGG + chr1_2:62423165-62423184 Msa0083330:intron 20.0%
!!! TGTCTTTTTATTGTTTTTTC+AGG + chr1_2:62423257-62423276 Msa0083330:intron 20.0%
!!! GTCTTTTTATTGTTTTTTCA+GGG + chr1_2:62423258-62423277 Msa0083330:intron 20.0%
!! AACAAAAACTTAGATTAAGT+CGG - chr1_2:62423394-62423413 None:intergenic 20.0%
!! GTTTATGTAAAATGATATTG+AGG - chr1_2:62423472-62423491 None:intergenic 20.0%
!!! CTTTTGCTTATAAATCATTT+CGG - chr1_2:62424362-62424381 None:intergenic 20.0%
!!! TTTTCTATGTGTTTAAACTT+CGG - chr1_2:62424524-62424543 None:intergenic 20.0%
!! ACACATAGAAAAAATTCATT+TGG + chr1_2:62424532-62424551 Msa0083330:intron 20.0%
!! CAGACAAATATAATATATGA+TGG + chr1_2:62424975-62424994 Msa0083330:intron 20.0%
!! TTAATCTATTTCAAATTCAC+GGG - chr1_2:62425034-62425053 None:intergenic 20.0%
!!! TTTTTTACAAGAAAAAGACA+TGG + chr1_2:62425118-62425137 Msa0083330:intron 20.0%
!!! CAAACAAATTTTTTTTTGAG+AGG - chr1_2:62425179-62425198 None:intergenic 20.0%
!! TTATGTAAAATAAACAAGAC+AGG - chr1_2:62425574-62425593 None:intergenic 20.0%
!! AATCATTATAGTCTCAAATA+TGG + chr1_2:62425881-62425900 Msa0083330:intron 20.0%
!! TACTTTATGTATATGCTTTA+TGG - chr1_2:62426019-62426038 None:intergenic 20.0%
!!! ACCTTTTAGTATTAAACAAA+TGG - chr1_2:62426063-62426082 None:intergenic 20.0%
!!! ATCCTAAAAATTCATTTTAG+CGG - chr1_2:62426169-62426188 None:intergenic 20.0%
!!! GCTAATATAGTTTTAATATG+TGG - chr1_2:62426362-62426381 None:intergenic 20.0%
!!! TCATGATTTGTAATTATTTG+GGG - chr1_2:62426459-62426478 None:intergenic 20.0%
!! AAAATAAAGGTCTTAGATTA+AGG + chr1_2:62426478-62426497 Msa0083330:intron 20.0%
!! CATAAGCAATTATATAATAC+AGG + chr1_2:62426731-62426750 Msa0083330:intron 20.0%
!!! ATGCAAGCATATAAATTTTT+AGG + chr1_2:62426906-62426925 Msa0083330:intron 20.0%
!!! AATTTTTTTATGGTTTGATC+AGG - chr1_2:62426961-62426980 None:intergenic 20.0%
!! AAGGCTTATTATAATAGTAA+AGG - chr1_2:62427006-62427025 None:intergenic 20.0%
!!! AAAACTATGTTTTATATCTG+AGG - chr1_2:62427478-62427497 None:intergenic 20.0%
!!! ATTTTACGATTCAAACAAAA+TGG + chr1_2:62427755-62427774 Msa0083330:CDS 20.0%
! GAGATCAATAAAAGAAACTT+TGG + chr1_2:62422705-62422724 Msa0083330:CDS 25.0%
!! TTTTTGCTTATAACAATGAC+TGG + chr1_2:62423202-62423221 Msa0083330:intron 25.0%
! ATTGAAACTCATCAAGATTA+CGG - chr1_2:62423567-62423586 None:intergenic 25.0%
!!! TATTTTGATTGTTGGATTGT+AGG - chr1_2:62423651-62423670 None:intergenic 25.0%
!!! TTTTTGAGATGTTGAGTTAA+AGG + chr1_2:62423856-62423875 Msa0083330:intron 25.0%
!! ATTCAAGTTTGAGTACTTAA+GGG - chr1_2:62423950-62423969 None:intergenic 25.0%
!! AATTCAAGTTTGAGTACTTA+AGG - chr1_2:62423951-62423970 None:intergenic 25.0%
! TAAGTTAACTATCATAAGCT+AGG + chr1_2:62424270-62424289 Msa0083330:intron 25.0%
! CGAAATGATTTATAAGCAAA+AGG + chr1_2:62424360-62424379 Msa0083330:intron 25.0%
!! CACTTGAGTCAAATTTTTAT+TGG - chr1_2:62424444-62424463 None:intergenic 25.0%
! CAATAAAAATTTGACTCAAG+TGG + chr1_2:62424442-62424461 Msa0083330:intron 25.0%
!! AAATAGACCTTTTAAACAAG+TGG + chr1_2:62424470-62424489 Msa0083330:intron 25.0%
! AAATTGACCACTTGTTTAAA+AGG - chr1_2:62424480-62424499 None:intergenic 25.0%
! CATAGAAAAAATTCATTTGG+TGG + chr1_2:62424535-62424554 Msa0083330:intron 25.0%
!!! TTTTTGGGTTAACATGTTAT+AGG - chr1_2:62424619-62424638 None:intergenic 25.0%
! TAATCTATTTCAAATTCACG+GGG - chr1_2:62425033-62425052 None:intergenic 25.0%
! GCAAAAAATACAATATATCG+AGG - chr1_2:62425062-62425081 None:intergenic 25.0%
!! ATAACTTGTAATAGTGTTGT+GGG - chr1_2:62425222-62425241 None:intergenic 25.0%
! TTAACTGCAAGAACAATAAT+AGG - chr1_2:62425361-62425380 None:intergenic 25.0%
! GCCATTTGTTTAATACTAAA+AGG + chr1_2:62426059-62426078 Msa0083330:intron 25.0%
!! ACTTCATCAATTTAGAACAT+AGG + chr1_2:62426090-62426109 Msa0083330:intron 25.0%
! AAGAAAAGAATATAGCATGT+GGG + chr1_2:62426388-62426407 Msa0083330:intron 25.0%
! TTATAGAAATAAGCTGAAGA+TGG - chr1_2:62426623-62426642 None:intergenic 25.0%
!!! CTTATTTCTATAAGCTCTAT+AGG + chr1_2:62426630-62426649 Msa0083330:intron 25.0%
!! ATAGATAATTAGGCACTTTT+TGG - chr1_2:62426791-62426810 None:intergenic 25.0%
!!! AGCTCATGCTTTTTTTTTTT+GGG - chr1_2:62426845-62426864 None:intergenic 25.0%
! ATTCAAATGAAACAGAAAGT+AGG + chr1_2:62426978-62426997 Msa0083330:intron 25.0%
!! ACTATTTCTTGAAAACAAGT+TGG - chr1_2:62427210-62427229 None:intergenic 25.0%
! TGATTAACTAAAGTGGTTAA+AGG - chr1_2:62427351-62427370 None:intergenic 25.0%
! AGGTATTTGATTAACTAAAG+TGG - chr1_2:62427358-62427377 None:intergenic 25.0%
! AATAGAATTGAACTCAGAAA+TGG - chr1_2:62427436-62427455 None:intergenic 25.0%
!! TTTTGTTCCTCTAAATCTTT+TGG + chr1_2:62427494-62427513 Msa0083330:CDS 25.0%
! ATTCAAGCAAATTCATTGAA+TGG + chr1_2:62428065-62428084 Msa0083330:CDS 25.0%
! AAATTACAAGCAATATCACA+AGG + chr1_2:62428113-62428132 Msa0083330:CDS 25.0%
! CACATTGATGAGATTAAAAA+TGG + chr1_2:62428191-62428210 Msa0083330:CDS 25.0%
! TGATGAGATTAAAAATGGAA+AGG + chr1_2:62428196-62428215 Msa0083330:CDS 25.0%
! ATGATATCCATATCTAAAGA+TGG - chr1_2:62428326-62428345 None:intergenic 25.0%
! CTTTAGATATGGATATCATT+TGG + chr1_2:62428327-62428346 Msa0083330:CDS 25.0%
!!! ATGGAATTTTTTCTGTACGA+TGG + chr1_2:62422670-62422689 Msa0083330:CDS 30.0%
! AACTTTGAGAGTGATTGAAA+AGG + chr1_2:62422729-62422748 Msa0083330:CDS 30.0%
CTTAGTGAAAAGATGTTCAT+TGG + chr1_2:62422760-62422779 Msa0083330:CDS 30.0%
TTGAAACTCATCAAGATTAC+GGG - chr1_2:62423566-62423585 None:intergenic 30.0%
ATAGAGATGTGACTATAGTT+CGG - chr1_2:62424094-62424113 None:intergenic 30.0%
! ACTTGTTAGGTGCATAATAT+AGG - chr1_2:62424567-62424586 None:intergenic 30.0%
TTGGCATGTCTTGATTATTT+GGG + chr1_2:62424875-62424894 Msa0083330:intron 30.0%
AGGATTGCTAGATTTGAATA+TGG + chr1_2:62424952-62424971 Msa0083330:intron 30.0%
! CATAACTTGTAATAGTGTTG+TGG - chr1_2:62425223-62425242 None:intergenic 30.0%
CATTCTTAATCATCATGATG+AGG + chr1_2:62425464-62425483 Msa0083330:intron 30.0%
TAAAGAACAATGCTTGATGT+AGG + chr1_2:62425506-62425525 Msa0083330:intron 30.0%
TGTAAAATAAACAAGACAGG+AGG - chr1_2:62425571-62425590 None:intergenic 30.0%
TACTTTATAATCCATGCACA+TGG - chr1_2:62425640-62425659 None:intergenic 30.0%
ATTAGAATTGCACTCTTAAG+TGG - chr1_2:62425864-62425883 None:intergenic 30.0%
CATTATAGTCTCAAATATGG+AGG + chr1_2:62425884-62425903 Msa0083330:intron 30.0%
AAATGTATACCAGAATCTCA+TGG - chr1_2:62425925-62425944 None:intergenic 30.0%
! TACATACATTTGCTGCAAAT+TGG + chr1_2:62426037-62426056 Msa0083330:intron 30.0%
! CACCGCTAAAATGAATTTTT+AGG + chr1_2:62426164-62426183 Msa0083330:intron 30.0%
CATTTCAACAAGTAGATAAG+AGG + chr1_2:62426231-62426250 Msa0083330:intron 30.0%
ATTTCATAGACACTAAGCAT+GGG - chr1_2:62426285-62426304 None:intergenic 30.0%
GAAGAAAAGAATATAGCATG+TGG + chr1_2:62426387-62426406 Msa0083330:intron 30.0%
TTTCTATAAGCTCTATAGGA+TGG + chr1_2:62426634-62426653 Msa0083330:intron 30.0%
!!! CAGCTCATGCTTTTTTTTTT+TGG - chr1_2:62426846-62426865 None:intergenic 30.0%
! ACTTTTCTTTAACAGCCAAT+TGG - chr1_2:62426876-62426895 None:intergenic 30.0%
TCTCATATTCACTGTCTAAA+AGG + chr1_2:62427130-62427149 Msa0083330:intron 30.0%
ACTGTCTAAAAGGATCTATA+TGG + chr1_2:62427140-62427159 Msa0083330:intron 30.0%
TGTGTAAAGATTTCCATCTT+GGG - chr1_2:62427177-62427196 None:intergenic 30.0%
TTGTGTAAAGATTTCCATCT+TGG - chr1_2:62427178-62427197 None:intergenic 30.0%
GATGGAAATCTTTACACAAA+AGG + chr1_2:62427179-62427198 Msa0083330:CDS 30.0%
AACAACAGAATCCAAGTATT+TGG + chr1_2:62427230-62427249 Msa0083330:CDS 30.0%
AATTGTATCCTCCAAATACT+TGG - chr1_2:62427244-62427263 None:intergenic 30.0%
GAGGATACAATTATAAGAAG+AGG + chr1_2:62427252-62427271 Msa0083330:CDS 30.0%
TTCTACTTCAATGAAACAAG+AGG + chr1_2:62427323-62427342 Msa0083330:CDS 30.0%
AATTGAACTCAGAAATGGAT+TGG - chr1_2:62427431-62427450 None:intergenic 30.0%
AGAGTTTCCAAAAGATTTAG+AGG - chr1_2:62427504-62427523 None:intergenic 30.0%
AAAGTCAAGTTTGGAGATTT+CGG - chr1_2:62427597-62427616 None:intergenic 30.0%
TGCAAAAACAAAGTCAAGTT+TGG - chr1_2:62427606-62427625 None:intergenic 30.0%
!!! AAACTTGACTTTGTTTTTGC+AGG + chr1_2:62427605-62427624 Msa0083330:CDS 30.0%
AATTGAGACATAGGATATGT+GGG - chr1_2:62427699-62427718 None:intergenic 30.0%
AAATTGAGACATAGGATATG+TGG - chr1_2:62427700-62427719 None:intergenic 30.0%
ACATATCCTATGTCTCAATT+TGG + chr1_2:62427699-62427718 Msa0083330:CDS 30.0%
!! TTTGTTGATGATGTTGAGTT+AGG - chr1_2:62427725-62427744 None:intergenic 30.0%
! TGAATCACATGCTTTAGATT+TGG - chr1_2:62428050-62428069 None:intergenic 30.0%
TCTTCTTCTCATAAAAAGCA+AGG + chr1_2:62428140-62428159 Msa0083330:CDS 30.0%
CATCAGAAAGGTTAAACAAT+AGG + chr1_2:62428168-62428187 Msa0083330:CDS 30.0%
! TGGAAAGGATGAAAGTATAA+AGG + chr1_2:62428211-62428230 Msa0083330:CDS 30.0%
! TGAAAGTATAAAGGAGTTGA+AGG + chr1_2:62428220-62428239 Msa0083330:CDS 30.0%
TAGAATGCCATCTTTAGATA+TGG + chr1_2:62428316-62428335 Msa0083330:CDS 30.0%
AGAGTGATTGAAAAGGAAAG+TGG + chr1_2:62422736-62422755 Msa0083330:CDS 35.0%
GAGTGATTGAAAAGGAAAGT+GGG + chr1_2:62422737-62422756 Msa0083330:CDS 35.0%
AGTGAAAAGATGTTCATTGG+TGG + chr1_2:62422763-62422782 Msa0083330:CDS 35.0%
! GGAAGATTGTCTTTTATAGC+AGG - chr1_2:62422931-62422950 None:intergenic 35.0%
TTGTTGAGTACTTCAAGGAA+AGG + chr1_2:62422965-62422984 Msa0083330:intron 35.0%
CTAATGTTACGTACACTTTC+CGG + chr1_2:62423071-62423090 Msa0083330:intron 35.0%
CACTAACTCATATTTCGCTT+TGG - chr1_2:62423239-62423258 None:intergenic 35.0%
ATGAGATGATTCATCTGAGA+CGG - chr1_2:62424208-62424227 None:intergenic 35.0%
TCATCTCATAGAAGACTCAT+TGG + chr1_2:62424219-62424238 Msa0083330:intron 35.0%
CATGTTATAGGTAATCCAAC+CGG - chr1_2:62424607-62424626 None:intergenic 35.0%
CATAATGCTACACTCTTGAA+GGG - chr1_2:62424696-62424715 None:intergenic 35.0%
! ACTAAGGAACACTTTAGAGA+TGG + chr1_2:62424742-62424761 Msa0083330:intron 35.0%
ATACAAAACAGAGACATGCT+TGG + chr1_2:62424856-62424875 Msa0083330:intron 35.0%
CTTGGCATGTCTTGATTATT+TGG + chr1_2:62424874-62424893 Msa0083330:intron 35.0%
ATATTGTGTTTCACGATCAC+AGG + chr1_2:62424932-62424951 Msa0083330:intron 35.0%
ATGATCCTCAATTTAAGCAG+AGG + chr1_2:62425419-62425438 Msa0083330:intron 35.0%
CATTACCTCTGCTTAAATTG+AGG - chr1_2:62425427-62425446 None:intergenic 35.0%
CAATTTAAGCAGAGGTAATG+TGG + chr1_2:62425427-62425446 Msa0083330:intron 35.0%
TCCATTTGTTTCATGACACA+TGG - chr1_2:62425815-62425834 None:intergenic 35.0%
TATAGTCTCAAATATGGAGG+TGG + chr1_2:62425887-62425906 Msa0083330:intron 35.0%
!! AAAATTCATTTTAGCGGTGC+AGG - chr1_2:62426163-62426182 None:intergenic 35.0%
ATGAAATTTGCCACCTCATT+TGG + chr1_2:62426196-62426215 Msa0083330:intron 35.0%
CATTTCATAGACACTAAGCA+TGG - chr1_2:62426286-62426305 None:intergenic 35.0%
AGTGACAACAAAACAAAGCA+TGG + chr1_2:62426310-62426329 Msa0083330:intron 35.0%
AACAAAACAAAGCATGGCAT+TGG + chr1_2:62426316-62426335 Msa0083330:intron 35.0%
AAGGTCTTAGATTAAGGAAG+TGG + chr1_2:62426484-62426503 Msa0083330:intron 35.0%
TACAGGCTTATGATGATAAG+AGG + chr1_2:62426748-62426767 Msa0083330:intron 35.0%
CATTTGACAGGTATCTGTTA+AGG - chr1_2:62427025-62427044 None:intergenic 35.0%
ACCTGTCAAATGTCAATATG+AGG + chr1_2:62427033-62427052 Msa0083330:intron 35.0%
ACCTCATATTGACATTTGAC+AGG - chr1_2:62427037-62427056 None:intergenic 35.0%
! TAGCCACAAGGAAATTTGTT+TGG + chr1_2:62427065-62427084 Msa0083330:intron 35.0%
ACACCAAACAAATTTCCTTG+TGG - chr1_2:62427071-62427090 None:intergenic 35.0%
AACAGAATCCAAGTATTTGG+AGG + chr1_2:62427233-62427252 Msa0083330:CDS 35.0%
TGATGATCATTGAACTTTGC+AGG - chr1_2:62427378-62427397 None:intergenic 35.0%
! ATATCTGAGGCTAAGACATT+AGG - chr1_2:62427465-62427484 None:intergenic 35.0%
!! AAATCTTTTGGAAACTCTCC+CGG + chr1_2:62427506-62427525 Msa0083330:CDS 35.0%
!! TGAAGTTGATGAGTATAGCA+TGG - chr1_2:62427637-62427656 None:intergenic 35.0%
ACGATTCAAACAAAATGGAC+AGG + chr1_2:62427760-62427779 Msa0083330:CDS 35.0%
CCAATTCTCATTGAAAGACT+TGG - chr1_2:62427808-62427827 None:intergenic 35.0%
CCAAGTCTTTCAATGAGAAT+TGG + chr1_2:62427805-62427824 Msa0083330:CDS 35.0%
AAGACTCAACCTATGAAGTA+TGG + chr1_2:62427840-62427859 Msa0083330:CDS 35.0%
CTATGAAGTATGGTACAAGA+GGG + chr1_2:62427850-62427869 Msa0083330:CDS 35.0%
! ACAAGAGGGAAGCTTTTTAA+AGG + chr1_2:62427864-62427883 Msa0083330:CDS 35.0%
! CAAGAGGGAAGCTTTTTAAA+GGG + chr1_2:62427865-62427884 Msa0083330:CDS 35.0%
!! AAGAGGGAAGCTTTTTAAAG+GGG + chr1_2:62427866-62427885 Msa0083330:CDS 35.0%
AAATTAGGCTACCAAGAAAC+AGG + chr1_2:62427922-62427941 Msa0083330:CDS 35.0%
ATATGCAATTGCAGCATCTT+CGG - chr1_2:62427979-62427998 None:intergenic 35.0%
ACAGCAGCATATATACTAAG+AGG + chr1_2:62428002-62428021 Msa0083330:CDS 35.0%
ACAGAATGAGATATGTGATG+TGG + chr1_2:62428277-62428296 Msa0083330:CDS 35.0%
! TTCATTGGTGGCAACACAAT+TGG + chr1_2:62422775-62422794 Msa0083330:CDS 40.0%
AGTATGTGCAATCCAACCTA+AGG - chr1_2:62422815-62422834 None:intergenic 40.0%
CCAACAATTTCTTCCATGAC+TGG - chr1_2:62422841-62422860 None:intergenic 40.0%
CCAGTCATGGAAGAAATTGT+TGG + chr1_2:62422838-62422857 Msa0083330:CDS 40.0%
AATTCTTGACCCAAGAGTGA+AGG - chr1_2:62422897-62422916 None:intergenic 40.0%
CTCTTGGGTCAAGAATTTCT+TGG + chr1_2:62422900-62422919 Msa0083330:CDS 40.0%
TACTCAACAAGTAGCTCATG+GGG - chr1_2:62422955-62422974 None:intergenic 40.0%
GTACTCAACAAGTAGCTCAT+GGG - chr1_2:62422956-62422975 None:intergenic 40.0%
AGTACTCAACAAGTAGCTCA+TGG - chr1_2:62422957-62422976 None:intergenic 40.0%
! GCTACTTGTTGAGTACTTCA+AGG + chr1_2:62422960-62422979 Msa0083330:intron 40.0%
TTGAGTACTTCAAGGAAAGG+AGG + chr1_2:62422968-62422987 Msa0083330:intron 40.0%
TAAGTCGGTTGCTATGATCA+TGG - chr1_2:62423379-62423398 None:intergenic 40.0%
CGCGTGAGTATATATGAAGA+GGG - chr1_2:62423746-62423765 None:intergenic 40.0%
TCGCGTGAGTATATATGAAG+AGG - chr1_2:62423747-62423766 None:intergenic 40.0%
ATGTGACTATAGTTCGGTCA+GGG - chr1_2:62424088-62424107 None:intergenic 40.0%
GTCACATCTCTATCAGATTG+TGG + chr1_2:62424101-62424120 Msa0083330:intron 40.0%
ACATCTCTATCAGATTGTGG+TGG + chr1_2:62424104-62424123 Msa0083330:intron 40.0%
TCTCTCATCTACTTGAAGCT+TGG - chr1_2:62424175-62424194 None:intergenic 40.0%
TTCAAGTAGATGAGAGATCG+AGG + chr1_2:62424178-62424197 Msa0083330:intron 40.0%
! TGAGATGATTCATCTGAGAC+GGG - chr1_2:62424207-62424226 None:intergenic 40.0%
ACCTAACAAGTTTCCCAACA+GGG + chr1_2:62424576-62424595 Msa0083330:intron 40.0%
CCATAATGCTACACTCTTGA+AGG - chr1_2:62424697-62424716 None:intergenic 40.0%
! CCTTCAAGAGTGTAGCATTA+TGG + chr1_2:62424694-62424713 Msa0083330:intron 40.0%
ATTCACGGGGTACAAATATG+TGG - chr1_2:62425020-62425039 None:intergenic 40.0%
GAGACACAAAGACAGATTCT+AGG - chr1_2:62425745-62425764 None:intergenic 40.0%
GCCATGTGTCATGAAACAAA+TGG + chr1_2:62425811-62425830 Msa0083330:intron 40.0%
ATACCAGAATCTCATGGTCA+TGG - chr1_2:62425919-62425938 None:intergenic 40.0%
CCACATTTCAATGTCTCTTG+AGG - chr1_2:62425995-62426014 None:intergenic 40.0%
CCTCAAGAGACATTGAAATG+TGG + chr1_2:62425992-62426011 Msa0083330:intron 40.0%
TTTCTGATCACCAAATGAGG+TGG - chr1_2:62426209-62426228 None:intergenic 40.0%
GTCTTTCTGATCACCAAATG+AGG - chr1_2:62426212-62426231 None:intergenic 40.0%
ATGAGCTGTCAGATTCCAAT+TGG + chr1_2:62426858-62426877 Msa0083330:intron 40.0%
GGAAGATACATTTCCCAAGA+TGG + chr1_2:62427161-62427180 Msa0083330:CDS 40.0%
! CATCTCCACAAAAGCTTTTC+TGG + chr1_2:62427289-62427308 Msa0083330:CDS 40.0%
! GTACACCAGAAAAGCTTTTG+TGG - chr1_2:62427297-62427316 None:intergenic 40.0%
TGAGGCTAAGACATTAGGAT+TGG - chr1_2:62427460-62427479 None:intergenic 40.0%
GAAGAAGCTAAAGATACTGC+AGG - chr1_2:62427561-62427580 None:intergenic 40.0%
! GTTGATGAGTATAGCATGGA+TGG - chr1_2:62427633-62427652 None:intergenic 40.0%
GTTAGGCCAAATTGAGACAT+AGG - chr1_2:62427708-62427727 None:intergenic 40.0%
! CTTCATAGGTTGAGTCTTTG+TGG - chr1_2:62427838-62427857 None:intergenic 40.0%
CCTCTTGTACCATACTTCAT+AGG - chr1_2:62427852-62427871 None:intergenic 40.0%
CCTATGAAGTATGGTACAAG+AGG + chr1_2:62427849-62427868 Msa0083330:CDS 40.0%
!! GGAAATGGGTTGCTGAAATT+AGG + chr1_2:62427907-62427926 Msa0083330:CDS 40.0%
! AACAACTGCTTCACTTGTTG+AGG + chr1_2:62428088-62428107 Msa0083330:CDS 40.0%
AGCAAGGTGATTCATCAGAA+AGG + chr1_2:62428156-62428175 Msa0083330:CDS 40.0%
ATAAAGGAGTTGAAGGTTGC+AGG + chr1_2:62428227-62428246 Msa0083330:CDS 40.0%
TGGTGGCAACACAATTGGAT+TGG + chr1_2:62422780-62422799 Msa0083330:CDS 45.0%
ATTTCCCCACCTTCACTCTT+GGG + chr1_2:62422885-62422904 Msa0083330:CDS 45.0%
GTACTTCAAGGAAAGGAGGA+AGG + chr1_2:62422972-62422991 Msa0083330:intron 45.0%
! TAACAATGACTGGAGAGTGC+AGG + chr1_2:62423212-62423231 Msa0083330:intron 45.0%
GATGTGACTATAGTTCGGTC+AGG - chr1_2:62424089-62424108 None:intergenic 45.0%
! ATCTACTTGAAGCTTGGTGG+TGG - chr1_2:62424169-62424188 None:intergenic 45.0%
CTCATCTACTTGAAGCTTGG+TGG - chr1_2:62424172-62424191 None:intergenic 45.0%
CACCTAACAAGTTTCCCAAC+AGG + chr1_2:62424575-62424594 Msa0083330:intron 45.0%
! TCCCTGTTGGGAAACTTGTT+AGG - chr1_2:62424580-62424599 None:intergenic 45.0%
GTTTCCCAACAGGGAAAATC+CGG + chr1_2:62424585-62424604 Msa0083330:intron 45.0%
ATGGCGCATGTTCATGCATT+TGG + chr1_2:62424994-62425013 Msa0083330:intron 45.0%
! AGTGTTGTGGGCTACTACAT+TGG - chr1_2:62425210-62425229 None:intergenic 45.0%
CTTAGTCAGAACCATGTGCA+TGG + chr1_2:62425626-62425645 Msa0083330:intron 45.0%
TGGCTGCAAGAAACGAAGAT+CGG + chr1_2:62426504-62426523 Msa0083330:intron 45.0%
!! GGAAGCTTTTTAAAGGGGTG+AGG + chr1_2:62427871-62427890 Msa0083330:CDS 45.0%
GCTACCAAGAAACAGGACTA+GGG + chr1_2:62427929-62427948 Msa0083330:CDS 45.0%
!!! AATTTTTTTTTTTTTTTTTG+TGG + chr1_2:62424495-62424514 Msa0083330:intron 5.0%
!!! ATATTAAAAATGTTAAATTT+TGG + chr1_2:62424777-62424796 Msa0083330:intron 5.0%
!! AAATCAAAATAAAATTATTA+TGG - chr1_2:62425250-62425269 None:intergenic 5.0%
! GGATTGGCAGACATAGCCTT+AGG + chr1_2:62422796-62422815 Msa0083330:CDS 50.0%
! TGGCAGACATAGCCTTAGGT+TGG + chr1_2:62422800-62422819 Msa0083330:CDS 50.0%
TGCACATACTCTGCCAGTCA+TGG + chr1_2:62422825-62422844 Msa0083330:CDS 50.0%
CATTTCCCCACCTTCACTCT+TGG + chr1_2:62422884-62422903 Msa0083330:CDS 50.0%
TTGACCCAAGAGTGAAGGTG+GGG - chr1_2:62422892-62422911 None:intergenic 50.0%
CTTGACCCAAGAGTGAAGGT+GGG - chr1_2:62422893-62422912 None:intergenic 50.0%
TCTTGACCCAAGAGTGAAGG+TGG - chr1_2:62422894-62422913 None:intergenic 50.0%
TCAACAAGTAGCTCATGGGG+TGG - chr1_2:62422952-62422971 None:intergenic 50.0%
! CCAACCGGATTTTCCCTGTT+GGG - chr1_2:62424592-62424611 None:intergenic 50.0%
! TCCAACCGGATTTTCCCTGT+TGG - chr1_2:62424593-62424612 None:intergenic 50.0%
CTGCCATGACCATGAGATTC+TGG + chr1_2:62425913-62425932 Msa0083330:intron 50.0%
! CCTTCTCTCATGGTTGATGC+AGG - chr1_2:62425952-62425971 None:intergenic 50.0%
CCTGCATCAACCATGAGAGA+AGG + chr1_2:62425949-62425968 Msa0083330:intron 50.0%
GACGCTGAAACCTTCTCTCA+TGG - chr1_2:62425962-62425981 None:intergenic 50.0%
AGGTGTGTCTCTTAGCCACA+AGG + chr1_2:62427053-62427072 Msa0083330:intron 50.0%
ATCGGAGCTACGGTTAAAGC+CGG - chr1_2:62427528-62427547 None:intergenic 50.0%
CTCATCAGACATCGGAGCTA+CGG - chr1_2:62427538-62427557 None:intergenic 50.0%
ACTGCAGGCTCATCAGACAT+CGG - chr1_2:62427546-62427565 None:intergenic 50.0%
GCAGAGACATTGGGGGAAAT+GGG + chr1_2:62427893-62427912 Msa0083330:CDS 50.0%
GGCTACCAAGAAACAGGACT+AGG + chr1_2:62427928-62427947 Msa0083330:CDS 50.0%
! CAGACCCTAGTCCTGTTTCT+TGG - chr1_2:62427936-62427955 None:intergenic 50.0%
CAAGAAACAGGACTAGGGTC+TGG + chr1_2:62427934-62427953 Msa0083330:CDS 50.0%
AACAGGACTAGGGTCTGGTT+AGG + chr1_2:62427939-62427958 Msa0083330:CDS 50.0%
ACAGGACTAGGGTCTGGTTA+GGG + chr1_2:62427940-62427959 Msa0083330:CDS 50.0%
CCCAACAGGGAAAATCCGGT+TGG + chr1_2:62424589-62424608 Msa0083330:intron 55.0%
TCGGAGCTACGGTTAAAGCC+GGG - chr1_2:62427527-62427546 None:intergenic 55.0%
AAGGGGTGAGGCAGAGACAT+TGG + chr1_2:62427883-62427902 Msa0083330:CDS 55.0%
AGGGGTGAGGCAGAGACATT+GGG + chr1_2:62427884-62427903 Msa0083330:CDS 55.0%
GGCAGAGACATTGGGGGAAA+TGG + chr1_2:62427892-62427911 Msa0083330:CDS 55.0%
GGGGTGAGGCAGAGACATTG+GGG + chr1_2:62427885-62427904 Msa0083330:CDS 60.0%
GGGTGAGGCAGAGACATTGG+GGG + chr1_2:62427886-62427905 Msa0083330:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 62422667 62428376 62422667 ID=Msa0083330;Name=Msa0083330
chr1_2 mRNA 62422667 62428376 62422667 ID=Msa0083330-mRNA-1;Parent=Msa0083330;Name=Msa0083330-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|2|0|509
chr1_2 exon 62422667 62422971 62422667 ID=Msa0083330-mRNA-1:exon:20773;Parent=Msa0083330-mRNA-1
chr1_2 exon 62427152 62428376 62427152 ID=Msa0083330-mRNA-1:exon:20774;Parent=Msa0083330-mRNA-1
chr1_2 CDS 62422667 62422971 62422667 ID=Msa0083330-mRNA-1:cds;Parent=Msa0083330-mRNA-1
chr1_2 CDS 62427152 62428376 62427152 ID=Msa0083330-mRNA-1:cds;Parent=Msa0083330-mRNA-1
Gene Sequence

>Msa0083330

ATGATGGAATTTTTTCTGTACGATGGAGAACGACAAGAGAGATCAATAAAAGAAACTTTGGAAACTTTGAGAGTGATTGAAAAGGAAAGTGGGCTTAGTGAAAAGATGTTCATTGGTGGCAACACAATTGGATTGGCAGACATAGCCTTAGGTTGGATTGCACATACTCTGCCAGTCATGGAAGAAATTGTTGGAGTCAAGTTCATTACAGTTGATGCATTTCCCCACCTTCACTCTTGGGTCAAGAATTTCTTGGAAATTCCTGCTATAAAAGACAATCTTCCACCCCATGAGCTACTTGTTGAGATCTATATGGAAGATACATTTCCCAAGATGGAAATCTTTACACAAAAGGAATTACCAACTTGTTTTCAAGAAATAGTAACAACAGAATCCAAGTATTTGGAGGATACAATTATAAGAAGAGGCTCTTACTCAACATCATCTCCACAAAAGCTTTTCTGGTGTACTTCAAATTCTACTTCAATGAAACAAGAGGTACCTTTAACCACTTTAGTTAATCAAATACCTGCAAAGTTCAATGATCATCATGATGACATGAAGAATATGAAAGCTATAAACCAATCCATTTCTGAGTTCAATTCTATTTCCAATCCTAATGTCTTAGCCTCAGATATAAAACATAGTTTTGTTCCTCTAAATCTTTTGGAAACTCTCCCGGCTTTAACCGTAGCTCCGATGTCTGATGAGCCTGCAGTATCTTTAGCTTCTTCTACTTGCGCTACGCCGAAATCTCCAAACTTGACTTTGTTTTTGCAGGAACCATCCATGCTATACTCATCAACTTCAAATATGAAAAGTAGCGAAATCATGTCAACAACTTCAAATCCCACATATCCTATGTCTCAATTTGGCCTAACTCAACATCATCAACAAAGTGCTTATGAATTTTACGATTCAAACAAAATGGACAGGAATATGATGACAAATCTACAATCCAAGTCTTTCAATGAGAATTGGTTGAGTACCACAAAGACTCAACCTATGAAGTATGGTACAAGAGGGAAGCTTTTTAAAGGGGTGAGGCAGAGACATTGGGGGAAATGGGTTGCTGAAATTAGGCTACCAAGAAACAGGACTAGGGTCTGGTTAGGGACATTTGAAACAGCCGAAGATGCTGCAATTGCATATGATACAGCAGCATATATACTAAGAGGAGAATGTGCTCAGTTAAATTTTCCAAATCTAAAGCATGTGATTCAAGCAAATTCATTGAATGGAACAACTGCTTCACTTGTTGAGGCAAAATTACAAGCAATATCACAAGGTGTTTCTTCTTCTCATAAAAAGCAAGGTGATTCATCAGAAAGGTTAAACAATAGGCACATTGATGAGATTAAAAATGGAAAGGATGAAAGTATAAAGGAGTTGAAGGTTGCAGGTGACATAACTGAGAGAAGCAAAAGTACACAGAATGAGATATGTGATGTGGAAACTGTTCAGTTAAGTAGAATGCCATCTTTAGATATGGATATCATTTGGAATGAACTTCTAGTTTCTGATTCATGA
Protein sequence

>Msa0083330

MMEFFLYDGERQERSIKETLETLRVIEKESGLSEKMFIGGNTIGLADIALGWIAHTLPVMEEIVGVKFITVDAFPHLHSWVKNFLEIPAIKDNLPPHELLVEIYMEDTFPKMEIFTQKELPTCFQEIVTTESKYLEDTIIRRGSYSTSSPQKLFWCTSNSTSMKQEVPLTTLVNQIPAKFNDHHDDMKNMKAINQSISEFNSISNPNVLASDIKHSFVPLNLLETLPALTVAPMSDEPAVSLASSTCATPKSPNLTLFLQEPSMLYSSTSNMKSSEIMSTTSNPTYPMSQFGLTQHHQQSAYEFYDSNKMDRNMMTNLQSKSFNENWLSTTKTQPMKYGTRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEDAAIAYDTAAYILRGECAQLNFPNLKHVIQANSLNGTTASLVEAKLQAISQGVSSSHKKQGDSSERLNNRHIDEIKNGKDESIKELKVAGDITERSKSTQNEICDVETVQLSRMPSLDMDIIWNELLVSDS*