Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084470 | XP_013459511.1 | 68.732 | 355 | 104 | 4 | 77 | 429 | 1 | 350 | 1.73e-159 | 464 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084470 | sp|Q9SRH9|SNL1_ARATH | 34.161 | 161 | 87 | 5 | 8 | 164 | 56 | 201 | 1.58e-15 | 82.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084470 | A0A072UV92 | 68.732 | 355 | 104 | 4 | 77 | 429 | 1 | 350 | 8.28e-160 | 464 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0084470 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0084470 | Msa0176230 | 0.809903 | 1.503504e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084470 | MtrunA17_Chr3g0093911 | 68.732 | 355 | 104 | 4 | 77 | 429 | 1 | 350 | 1.59e-163 | 464 |
| Msa0084470 | MtrunA17_Chr7g0252101 | 60.706 | 425 | 152 | 10 | 12 | 429 | 16 | 432 | 8.74e-161 | 460 |
| Msa0084470 | MtrunA17_Chr1g0207351 | 64.045 | 356 | 116 | 6 | 81 | 429 | 16 | 366 | 1.26e-143 | 414 |
| Msa0084470 | MtrunA17_Chr4g0075971 | 54.110 | 438 | 175 | 8 | 10 | 429 | 173 | 602 | 3.77e-133 | 395 |
| Msa0084470 | MtrunA17_Chr6g0488101 | 48.359 | 457 | 187 | 15 | 11 | 429 | 10 | 455 | 9.40e-123 | 364 |
| Msa0084470 | MtrunA17_Chr3g0077801 | 55.056 | 356 | 153 | 5 | 77 | 429 | 1 | 352 | 1.74e-119 | 352 |
| Msa0084470 | MtrunA17_Chr6g0488271 | 49.522 | 418 | 170 | 13 | 43 | 429 | 8 | 415 | 5.83e-117 | 348 |
| Msa0084470 | MtrunA17_Chr3g0077901 | 50.552 | 362 | 166 | 5 | 73 | 428 | 17 | 371 | 6.15e-111 | 331 |
| Msa0084470 | MtrunA17_Chr3g0077851 | 52.802 | 339 | 147 | 5 | 96 | 428 | 4 | 335 | 1.58e-109 | 326 |
| Msa0084470 | MtrunA17_Chr1g0209051 | 62.545 | 275 | 94 | 4 | 158 | 428 | 1 | 270 | 3.39e-107 | 317 |
| Msa0084470 | MtrunA17_Chr3g0112311 | 51.657 | 362 | 157 | 9 | 77 | 427 | 1 | 355 | 3.33e-105 | 316 |
| Msa0084470 | MtrunA17_Chr7g0243331 | 52.422 | 351 | 158 | 7 | 82 | 429 | 6 | 350 | 4.21e-103 | 310 |
| Msa0084470 | MtrunA17_Chr6g0452641 | 49.045 | 314 | 143 | 7 | 127 | 429 | 33 | 340 | 2.43e-78 | 246 |
| Msa0084470 | MtrunA17_Chr3g0122991 | 44.615 | 325 | 116 | 7 | 79 | 391 | 2 | 274 | 1.19e-73 | 232 |
| Msa0084470 | MtrunA17_Chr1g0202841 | 62.983 | 181 | 65 | 1 | 249 | 429 | 1 | 179 | 4.37e-71 | 222 |
| Msa0084470 | MtrunA17_Chr3g0123471 | 49.254 | 268 | 123 | 8 | 158 | 421 | 1 | 259 | 2.79e-64 | 207 |
| Msa0084470 | MtrunA17_Chr4g0075861 | 53.202 | 203 | 78 | 3 | 10 | 197 | 173 | 373 | 4.26e-52 | 179 |
| Msa0084470 | MtrunA17_Chr7g0243391 | 45.794 | 214 | 111 | 3 | 73 | 283 | 14 | 225 | 8.54e-51 | 171 |
| Msa0084470 | MtrunA17_Chr1g0206951 | 62.393 | 117 | 43 | 1 | 80 | 195 | 2 | 118 | 2.29e-41 | 143 |
| Msa0084470 | MtrunA17_Chr1g0187941 | 56.934 | 137 | 59 | 0 | 249 | 385 | 1 | 137 | 1.90e-40 | 140 |
| Msa0084470 | MtrunA17_Chr1g0196231 | 56.410 | 156 | 61 | 4 | 65 | 217 | 215 | 366 | 3.88e-40 | 147 |
| Msa0084470 | MtrunA17_Chr6g0486591 | 47.853 | 163 | 72 | 5 | 276 | 429 | 1 | 159 | 1.24e-37 | 134 |
| Msa0084470 | MtrunA17_Chr1g0209191 | 60.396 | 101 | 34 | 2 | 331 | 428 | 1 | 98 | 6.24e-32 | 117 |
| Msa0084470 | MtrunA17_Chr1g0196241 | 69.620 | 79 | 20 | 2 | 322 | 399 | 3 | 78 | 6.48e-29 | 108 |
| Msa0084470 | MtrunA17_Chr1g0209061 | 51.724 | 116 | 46 | 1 | 1 | 116 | 2 | 107 | 2.44e-28 | 107 |
| Msa0084470 | MtrunA17_Chr6g0459061 | 28.857 | 350 | 229 | 11 | 85 | 426 | 18 | 355 | 2.97e-26 | 108 |
| Msa0084470 | MtrunA17_Chr7g0238781 | 42.222 | 135 | 71 | 5 | 109 | 239 | 27 | 158 | 7.28e-18 | 80.5 |
| Msa0084470 | MtrunA17_Chr8g0364231 | 39.831 | 118 | 64 | 3 | 8 | 125 | 41 | 151 | 1.28e-17 | 85.9 |
| Msa0084470 | MtrunA17_Chr3g0077911 | 64.615 | 65 | 21 | 2 | 9 | 72 | 90 | 153 | 6.62e-16 | 75.1 |
| Msa0084470 | MtrunA17_Chr1g0205861 | 46.154 | 78 | 41 | 1 | 8 | 85 | 15 | 91 | 1.76e-15 | 72.4 |
| Msa0084470 | MtrunA17_Chr1g0209201 | 51.351 | 74 | 34 | 2 | 5 | 78 | 12 | 83 | 2.28e-15 | 72.8 |
| Msa0084470 | MtrunA17_Chr5g0415031 | 40.385 | 104 | 55 | 3 | 8 | 111 | 42 | 138 | 4.11e-15 | 77.8 |
| Msa0084470 | MtrunA17_Chr3g0077861 | 63.077 | 65 | 22 | 2 | 9 | 72 | 90 | 153 | 6.50e-15 | 72.4 |
| Msa0084470 | MtrunA17_Chr1g0206781 | 45.000 | 80 | 38 | 2 | 11 | 85 | 13 | 91 | 1.53e-14 | 69.7 |
| Msa0084470 | MtrunA17_Chr6g0452001 | 36.441 | 118 | 68 | 2 | 8 | 125 | 62 | 172 | 3.58e-14 | 75.1 |
| Msa0084470 | MtrunA17_Chr6g0452021 | 36.752 | 117 | 65 | 3 | 9 | 125 | 43 | 150 | 7.03e-14 | 73.2 |
| Msa0084470 | MtrunA17_Chr1g0205811 | 39.823 | 113 | 54 | 4 | 3 | 109 | 7 | 111 | 1.27e-13 | 67.4 |
| Msa0084470 | MtrunA17_Chr7g0218911 | 46.774 | 62 | 32 | 1 | 13 | 74 | 2 | 62 | 1.72e-12 | 63.9 |
| Msa0084470 | MtrunA17_Chr1g0206771 | 48.438 | 64 | 32 | 1 | 11 | 74 | 18 | 80 | 2.43e-12 | 65.5 |
| Msa0084470 | MtrunA17_Chr1g0206771 | 47.826 | 69 | 35 | 1 | 4 | 72 | 90 | 157 | 2.80e-12 | 65.1 |
| Msa0084470 | MtrunA17_Chr8g0364021 | 44.304 | 79 | 43 | 1 | 8 | 86 | 43 | 120 | 4.51e-12 | 65.9 |
| Msa0084470 | MtrunA17_Chr5g0431721 | 53.846 | 65 | 26 | 3 | 13 | 74 | 16 | 79 | 4.56e-12 | 62.8 |
| Msa0084470 | MtrunA17_Chr3g0077881 | 46.237 | 93 | 40 | 4 | 1 | 92 | 1 | 84 | 2.26e-11 | 62.4 |
| Msa0084470 | MtrunA17_Chr3g0077941 | 49.367 | 79 | 37 | 3 | 1 | 78 | 1 | 77 | 3.10e-11 | 62.0 |
| Msa0084470 | MtrunA17_Chr3g0077811 | 44.304 | 79 | 41 | 3 | 1 | 78 | 6 | 82 | 3.52e-11 | 60.5 |
| Msa0084470 | MtrunA17_Chr3g0077891 | 49.367 | 79 | 37 | 3 | 1 | 78 | 1 | 77 | 3.79e-11 | 61.6 |
| Msa0084470 | MtrunA17_Chr3g0077891 | 52.308 | 65 | 29 | 2 | 9 | 72 | 99 | 162 | 4.68e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084470 | AT3G01320.1 | 34.161 | 161 | 87 | 5 | 8 | 164 | 56 | 201 | 1.61e-16 | 82.8 |
| Msa0084470 | AT3G01320.2 | 34.161 | 161 | 87 | 5 | 8 | 164 | 56 | 201 | 1.62e-16 | 82.8 |
| Msa0084470 | AT1G24190.3 | 41.414 | 99 | 51 | 2 | 8 | 106 | 13 | 104 | 1.03e-15 | 80.1 |
| Msa0084470 | AT1G24190.2 | 41.414 | 99 | 51 | 2 | 8 | 106 | 13 | 104 | 1.08e-15 | 80.1 |
| Msa0084470 | AT1G24190.1 | 41.414 | 99 | 51 | 2 | 8 | 106 | 13 | 104 | 1.09e-15 | 80.1 |
| Msa0084470 | AT5G15020.1 | 37.815 | 119 | 63 | 3 | 8 | 125 | 51 | 159 | 1.40e-15 | 79.7 |
| Msa0084470 | AT5G15020.2 | 37.815 | 119 | 63 | 3 | 8 | 125 | 51 | 159 | 1.70e-15 | 79.7 |
| Msa0084470 | AT1G59890.4 | 46.988 | 83 | 41 | 2 | 9 | 89 | 45 | 126 | 1.23e-14 | 77.0 |
| Msa0084470 | AT1G59890.1 | 46.988 | 83 | 41 | 2 | 9 | 89 | 45 | 126 | 1.39e-14 | 76.6 |
| Msa0084470 | AT1G59890.3 | 46.988 | 83 | 41 | 2 | 9 | 89 | 45 | 126 | 1.41e-14 | 76.6 |
| Msa0084470 | AT1G59890.2 | 46.988 | 83 | 41 | 2 | 9 | 89 | 45 | 126 | 1.47e-14 | 76.6 |
| Msa0084470 | AT1G70060.2 | 52.239 | 67 | 31 | 1 | 8 | 74 | 13 | 78 | 3.62e-14 | 75.5 |
| Msa0084470 | AT1G70060.1 | 52.239 | 67 | 31 | 1 | 8 | 74 | 13 | 78 | 3.62e-14 | 75.5 |
| Msa0084470 | AT1G10450.2 | 50.725 | 69 | 33 | 1 | 9 | 77 | 33 | 100 | 9.14e-13 | 70.9 |
| Msa0084470 | AT1G10450.1 | 50.725 | 69 | 33 | 1 | 9 | 77 | 33 | 100 | 9.14e-13 | 70.9 |
| Msa0084470 | AT1G10450.3 | 50.725 | 69 | 33 | 1 | 9 | 77 | 84 | 151 | 1.00e-12 | 70.9 |
| Msa0084470 | AT5G15025.1 | 42.105 | 76 | 43 | 1 | 8 | 83 | 46 | 120 | 1.18e-12 | 65.1 |
| Msa0084470 | AT1G70030.2 | 37.755 | 98 | 53 | 2 | 9 | 106 | 22 | 111 | 8.13e-12 | 63.2 |
| Msa0084470 | AT1G70030.3 | 37.143 | 105 | 54 | 3 | 9 | 111 | 22 | 116 | 8.91e-12 | 62.8 |
| Msa0084470 | AT1G24200.1 | 46.269 | 67 | 35 | 1 | 8 | 74 | 13 | 78 | 2.33e-11 | 63.2 |
| Msa0084470 | AT1G70030.1 | 36.893 | 103 | 57 | 2 | 9 | 111 | 11 | 105 | 2.69e-11 | 62.0 |
| Msa0084470 | AT1G27250.1 | 42.254 | 71 | 40 | 1 | 8 | 78 | 20 | 89 | 3.29e-11 | 61.2 |
Find 93 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCACTCGATTTATTTCT+TGG | 0.092423 | 1_2:-63947838 | Msa0084470:five_prime_UTR |
| TTCCAGCCCTCAAATCTTTC+AGG | 0.146764 | 1_2:+63947644 | None:intergenic |
| TTCTACATTAGTCGAATTAT+TGG | 0.154008 | 1_2:+63944951 | None:intergenic |
| TTATTTGTAGTTTCTGAATT+AGG | 0.165086 | 1_2:-63947948 | Msa0084470:five_prime_UTR |
| GATTTCATTATTCTTGTAAA+TGG | 0.220120 | 1_2:+63945740 | None:intergenic |
| ACAATATGTAGCGTTTATTC+AGG | 0.224490 | 1_2:-63945170 | Msa0084470:CDS |
| AGGACATACAGATTTAATTA+TGG | 0.245896 | 1_2:-63947572 | Msa0084470:CDS |
| CTCTCATATCCCCACTTGTT+CGG | 0.274296 | 1_2:+63945224 | None:intergenic |
| TATTTGTAGTTTCTGAATTA+GGG | 0.283688 | 1_2:-63947947 | Msa0084470:five_prime_UTR |
| CGAATTATTGGCAAACAAAA+AGG | 0.294660 | 1_2:+63944963 | None:intergenic |
| TTCAGAAACTACAAATAAAA+AGG | 0.297870 | 1_2:+63947953 | None:intergenic |
| CTCTGAGGAATTTGTCTTTG+TGG | 0.313965 | 1_2:-63945651 | Msa0084470:CDS |
| GGACATACAGATTTAATTAT+GGG | 0.317197 | 1_2:-63947571 | Msa0084470:CDS |
| TTTCAGTCTGACATAATTCA+TGG | 0.325552 | 1_2:+63945316 | None:intergenic |
| TGTTGTGATAAAAGGGAAAA+AGG | 0.329108 | 1_2:-63946098 | Msa0084470:intron |
| AGAGTGAAGAAGCTGTTTAA+AGG | 0.330293 | 1_2:-63947592 | Msa0084470:CDS |
| TATGAAGAAGTAATGGTTCT+TGG | 0.336847 | 1_2:+63945924 | None:intergenic |
| GAATCTCATCCTACAATTGT+TGG | 0.346564 | 1_2:-63945101 | Msa0084470:CDS |
| TCTCATATCCCCACTTGTTC+GGG | 0.349130 | 1_2:+63945225 | None:intergenic |
| AGTTTATCACTTGGAGATGA+TGG | 0.375141 | 1_2:-63945849 | Msa0084470:CDS |
| TTTCCGGCGTGTGCAAGAAT+TGG | 0.380354 | 1_2:-63945988 | Msa0084470:CDS |
| TTGGTTGGGTATGCTAATAA+AGG | 0.390018 | 1_2:+63945874 | None:intergenic |
| GGATGAGATTCAAGAAGAGA+TGG | 0.394418 | 1_2:+63945113 | None:intergenic |
| GTACAGATCTGCACTTTCAT+TGG | 0.394808 | 1_2:+63945355 | None:intergenic |
| AGAGAACTATGAACTTCCTT+TGG | 0.396409 | 1_2:-63946062 | Msa0084470:CDS |
| ACACGCCGGAAAACTGAAAT+AGG | 0.402270 | 1_2:+63945999 | None:intergenic |
| ATCACTAACGAGGCGAAGAT+AGG | 0.404482 | 1_2:-63945503 | Msa0084470:CDS |
| ATTGTACATTGTGTTACTCT+TGG | 0.412290 | 1_2:-63945007 | Msa0084470:three_prime_UTR |
| TAAAACTCCTGAAAGATTTG+AGG | 0.415830 | 1_2:-63947651 | Msa0084470:CDS |
| AAAACTCCTGAAAGATTTGA+GGG | 0.424484 | 1_2:-63947650 | Msa0084470:CDS |
| CTGAGGAGTACTCCCGTCAT+AGG | 0.433963 | 1_2:-63945440 | Msa0084470:CDS |
| CGAATCGGCGACGATAAACT+AGG | 0.434109 | 1_2:-63947733 | Msa0084470:CDS |
| CTAGTTTATCGTCGCCGATT+CGG | 0.442166 | 1_2:+63947734 | None:intergenic |
| TATGTCAGACTGAAAACTTT+GGG | 0.448246 | 1_2:-63945308 | Msa0084470:CDS |
| CCGGCGTGTGCAAGAATTGG+AGG | 0.450628 | 1_2:-63945985 | Msa0084470:CDS |
| TAGGAATTCCTAGTTCCCTT+AGG | 0.453013 | 1_2:-63945421 | Msa0084470:CDS |
| ATGAAGAAGTAATGGTTCTT+GGG | 0.453465 | 1_2:+63945925 | None:intergenic |
| GTTGAACGAGCAGCGGTTGA+AGG | 0.457218 | 1_2:+63947897 | None:intergenic |
| GCGTTCCAACCAACAATTGT+AGG | 0.458516 | 1_2:+63945092 | None:intergenic |
| CTCCTGAAAGATTTGAGGGC+TGG | 0.459564 | 1_2:-63947646 | Msa0084470:CDS |
| TTATGTCAGACTGAAAACTT+TGG | 0.462565 | 1_2:-63945309 | Msa0084470:CDS |
| AACTATGCAAATCAGTTCAA+TGG | 0.478283 | 1_2:-63947877 | Msa0084470:five_prime_UTR |
| GAATAATAACTCTTAGCATA+AGG | 0.482018 | 1_2:+63945896 | None:intergenic |
| CGTATCAAAATTAAATGTGT+TGG | 0.485240 | 1_2:-63944842 | Msa0084470:three_prime_UTR |
| GTCTATCAATCTCGAAATTG+TGG | 0.493729 | 1_2:-63945602 | Msa0084470:CDS |
| AGAGTGGGTTGTTGACTTTG+TGG | 0.494217 | 1_2:-63945549 | Msa0084470:CDS |
| ATAACCAACCTAAGGGAACT+AGG | 0.496475 | 1_2:+63945413 | None:intergenic |
| CAATATGTAGCGTTTATTCA+GGG | 0.497622 | 1_2:-63945169 | Msa0084470:CDS |
| CATCACAAATAACCAACCTA+AGG | 0.498767 | 1_2:+63945405 | None:intergenic |
| TCACTAACGAGGCGAAGATA+GGG | 0.506057 | 1_2:-63945502 | Msa0084470:CDS |
| AATTCCTAGTTCCCTTAGGT+TGG | 0.508434 | 1_2:-63945417 | Msa0084470:CDS |
| GGAAGAAGAATTGATATAAG+AGG | 0.508673 | 1_2:-63947625 | Msa0084470:CDS |
| GAAGAGTTACCTTCAGAGGT+AGG | 0.509259 | 1_2:+63945710 | None:intergenic |
| AAGAGTTACCTTCAGAGGTA+GGG | 0.509565 | 1_2:+63945711 | None:intergenic |
| TAGATGCCTAAAACACCAAT+CGG | 0.521949 | 1_2:+63945070 | None:intergenic |
| ATCAATCTCGAAATTGTGGA+TGG | 0.526711 | 1_2:-63945598 | Msa0084470:CDS |
| TAAAGAAGAGTTACCTTCAG+AGG | 0.531919 | 1_2:+63945706 | None:intergenic |
| AGAGTTACCTTCAGAGGTAG+GGG | 0.532859 | 1_2:+63945712 | None:intergenic |
| CTCATCCTACAATTGTTGGT+TGG | 0.536664 | 1_2:-63945097 | Msa0084470:CDS |
| GATGAGATTCAAGAAGAGAT+GGG | 0.537227 | 1_2:+63945114 | None:intergenic |
| TTGAACGAGCAGCGGTTGAA+GGG | 0.545385 | 1_2:+63947898 | None:intergenic |
| GGCGATATATGAAGAAGTAA+TGG | 0.551671 | 1_2:+63945917 | None:intergenic |
| ATATTAAATTTCTTAATCTG+AGG | 0.557985 | 1_2:-63945457 | Msa0084470:CDS |
| AAGATGAAGAATTTCCGAAT+CGG | 0.560007 | 1_2:-63947748 | Msa0084470:CDS |
| AACAATAGAAAATAGAGAGT+GGG | 0.566020 | 1_2:-63945564 | Msa0084470:CDS |
| AAGGAACAAGAAAACACGAC+AGG | 0.566522 | 1_2:+63947979 | None:intergenic |
| AGAAATAAATCGAGTGAAGG+AGG | 0.577568 | 1_2:+63947841 | None:intergenic |
| CAACAATAGAAAATAGAGAG+TGG | 0.582774 | 1_2:-63945565 | Msa0084470:CDS |
| GCATTTGCTAAAAGCAAGCA+AGG | 0.585085 | 1_2:+63945673 | None:intergenic |
| CATTGAGCAACCCGAACAAG+TGG | 0.585822 | 1_2:-63945235 | Msa0084470:CDS |
| GAACTAGGAATTCCTATGAC+GGG | 0.594218 | 1_2:+63945428 | None:intergenic |
| AATCGAGTGAAGGAGGATTG+AGG | 0.594289 | 1_2:+63947848 | None:intergenic |
| CCAAGAAATAAATCGAGTGA+AGG | 0.596858 | 1_2:+63947838 | None:intergenic |
| AATATGTAGCGTTTATTCAG+GGG | 0.598392 | 1_2:-63945168 | Msa0084470:CDS |
| GTGATATCAAACATATCCAA+AGG | 0.599034 | 1_2:+63946046 | None:intergenic |
| TTGTTGGTTGGAACGCCGAT+TGG | 0.602949 | 1_2:-63945085 | Msa0084470:CDS |
| ATCACAAATAACCAACCTAA+GGG | 0.609657 | 1_2:+63945406 | None:intergenic |
| GTAGTAACTAACCAGTTGGA+AGG | 0.611566 | 1_2:+63947536 | None:intergenic |
| TCAATCTCGAAATTGTGGAT+GGG | 0.618953 | 1_2:-63945597 | Msa0084470:CDS |
| GAATCGGCGACGATAAACTA+GGG | 0.619068 | 1_2:-63947732 | Msa0084470:CDS |
| GGAACTAGGAATTCCTATGA+CGG | 0.624231 | 1_2:+63945427 | None:intergenic |
| CACTAACGAGGCGAAGATAG+GGG | 0.627150 | 1_2:-63945501 | Msa0084470:CDS |
| CGATAAACTAGGGTTTCTCA+AGG | 0.627978 | 1_2:-63947722 | Msa0084470:CDS |
| AATATGTAACATAGCTAGAG+CGG | 0.634773 | 1_2:+63945816 | None:intergenic |
| TTGCATAGTTGAACGAGCAG+CGG | 0.641580 | 1_2:+63947890 | None:intergenic |
| ATTGAGCAACCCGAACAAGT+GGG | 0.652805 | 1_2:-63945234 | Msa0084470:CDS |
| CCTCCAATTCTTGCACACGC+CGG | 0.653779 | 1_2:+63945985 | None:intergenic |
| AGCAACTCTGTGTATTACAT+TGG | 0.654518 | 1_2:-63945203 | Msa0084470:CDS |
| TTGAGCAACCCGAACAAGTG+GGG | 0.657706 | 1_2:-63945233 | Msa0084470:CDS |
| AGCTATGTTACATATTCTAG+CGG | 0.658771 | 1_2:-63945809 | Msa0084470:CDS |
| GAGTTACCTTCAGAGGTAGG+GGG | 0.669065 | 1_2:+63945713 | None:intergenic |
| AGGAACAAGAAAACACGACA+GGG | 0.714785 | 1_2:+63947980 | None:intergenic |
| AATATATGTCATCACTAACG+AGG | 0.731941 | 1_2:-63945513 | Msa0084470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAATATTACGAA+TGG | + | chr1_2:63945353-63945372 | None:intergenic | 10.0% |
| !! | TTTGTAAAAAGAAATTAATT+TGG | - | chr1_2:63945528-63945547 | Msa0084470:CDS | 10.0% |
| !! | ATAAATAAAAACAAAACATA+TGG | - | chr1_2:63946713-63946732 | Msa0084470:intron | 10.0% |
| !!! | TTTTAACAAAATAGTTTTAG+AGG | - | chr1_2:63945653-63945672 | Msa0084470:CDS | 15.0% |
| !!! | ACTTGATTAATTTTTGTTTT+AGG | - | chr1_2:63946068-63946087 | Msa0084470:CDS | 15.0% |
| !!! | CTTGATTAATTTTTGTTTTA+GGG | - | chr1_2:63946069-63946088 | Msa0084470:CDS | 15.0% |
| !!! | TTGATTAATTTTTGTTTTAG+GGG | - | chr1_2:63946070-63946089 | Msa0084470:CDS | 15.0% |
| !!! | TTTTTGTATATGCTATAATT+TGG | + | chr1_2:63946370-63946389 | None:intergenic | 15.0% |
| !!! | TTGTTTATTTGATAATATCA+TGG | + | chr1_2:63946671-63946690 | None:intergenic | 15.0% |
| !! | ATATTAAATTTCTTAATCTG+AGG | - | chr1_2:63947401-63947420 | Msa0084470:intron | 15.0% |
| !! | TTCAGAAACTACAAATAAAA+AGG | + | chr1_2:63944908-63944927 | None:intergenic | 20.0% |
| !! | TTATTTGTAGTTTCTGAATT+AGG | - | chr1_2:63944910-63944929 | Msa0084470:three_prime_UTR | 20.0% |
| !! | TATTTGTAGTTTCTGAATTA+GGG | - | chr1_2:63944911-63944930 | Msa0084470:three_prime_UTR | 20.0% |
| !!! | ATTTCTTTTTACAAATACGA+TGG | + | chr1_2:63945523-63945542 | None:intergenic | 20.0% |
| !!! | GTAAAAAGAAATTAATTTGG+AGG | - | chr1_2:63945531-63945550 | Msa0084470:CDS | 20.0% |
| !! | ATTTATGTCCATTATTTATG+TGG | - | chr1_2:63945719-63945738 | Msa0084470:CDS | 20.0% |
| !!! | TTCATAACTTTGTTATGAAA+TGG | - | chr1_2:63945929-63945948 | Msa0084470:CDS | 20.0% |
| !! | AATGATATAATTATCCAATG+AGG | + | chr1_2:63945974-63945993 | None:intergenic | 20.0% |
| !! | TCATTGGATAATTATATCAT+TGG | - | chr1_2:63945973-63945992 | Msa0084470:CDS | 20.0% |
| !! | TCATTGGATATAATATATCA+TGG | - | chr1_2:63945989-63946008 | Msa0084470:CDS | 20.0% |
| !! | AACTATATGATTGTTTATGA+TGG | - | chr1_2:63946135-63946154 | Msa0084470:intron | 20.0% |
| !!! | TTTTCATAAGTTTTCCAATA+TGG | - | chr1_2:63946335-63946354 | Msa0084470:intron | 20.0% |
| !!! | TTTGGTTTTATATACCATAT+TGG | + | chr1_2:63946352-63946371 | None:intergenic | 20.0% |
| !!! | AGAATACTATTCATAGTTTT+GGG | + | chr1_2:63946529-63946548 | None:intergenic | 20.0% |
| !!! | ATTTTACTGGAGAATTTTTT+TGG | - | chr1_2:63946907-63946926 | Msa0084470:intron | 20.0% |
| !! | GATTTCATTATTCTTGTAAA+TGG | + | chr1_2:63947121-63947140 | None:intergenic | 20.0% |
| !!! | ACTTTTAGTAGTTTATTTCT+TGG | - | chr1_2:63947480-63947499 | Msa0084470:intron | 20.0% |
| !!! | AATGTAGAAAAAACTTTTGA+TGG | - | chr1_2:63947921-63947940 | Msa0084470:five_prime_UTR | 20.0% |
| !!! | CAACACATTTAATTTTGATA+CGG | + | chr1_2:63948018-63948037 | None:intergenic | 20.0% |
| ! | ACTACAAATAAAAAGGAACA+AGG | + | chr1_2:63944901-63944920 | None:intergenic | 25.0% |
| !!! | TTGGTTTTGTTACTTTGAAT+TGG | - | chr1_2:63945039-63945058 | Msa0084470:CDS | 25.0% |
| ! | AGGACATACAGATTTAATTA+TGG | - | chr1_2:63945286-63945305 | Msa0084470:CDS | 25.0% |
| ! | GGACATACAGATTTAATTAT+GGG | - | chr1_2:63945287-63945306 | Msa0084470:CDS | 25.0% |
| ! | TCGTTAAACCACATAAATAA+TGG | + | chr1_2:63945730-63945749 | None:intergenic | 25.0% |
| ! | AGAAAAAAGAAATACCTTCA+AGG | + | chr1_2:63945806-63945825 | None:intergenic | 25.0% |
| ! | AAAATGCAATATGCATTTGA+AGG | - | chr1_2:63945848-63945867 | Msa0084470:CDS | 25.0% |
| ! | AAATGCAATATGCATTTGAA+GGG | - | chr1_2:63945849-63945868 | Msa0084470:CDS | 25.0% |
| ! | TAAAATAAGTCAATCCAAAC+AGG | + | chr1_2:63946226-63946245 | None:intergenic | 25.0% |
| !! | GAGAATACTATTCATAGTTT+TGG | + | chr1_2:63946530-63946549 | None:intergenic | 25.0% |
| ! | AATAACATGAATAACCTACA+AGG | + | chr1_2:63946605-63946624 | None:intergenic | 25.0% |
| ! | TGATAATATCATGGAAAATG+AGG | + | chr1_2:63946662-63946681 | None:intergenic | 25.0% |
| !! | GGACTTTTCATAAATTTTAC+TGG | - | chr1_2:63946894-63946913 | Msa0084470:intron | 25.0% |
| ! | GAATAATAACTCTTAGCATA+AGG | + | chr1_2:63946965-63946984 | None:intergenic | 25.0% |
| !!! | AAGTGATAAACTTTTTGGTT+GGG | + | chr1_2:63947001-63947020 | None:intergenic | 25.0% |
| ! | AACAATAGAAAATAGAGAGT+GGG | - | chr1_2:63947294-63947313 | Msa0084470:intron | 25.0% |
| !! | GCATTATTTTCTATTTCGTT+TGG | - | chr1_2:63947580-63947599 | Msa0084470:CDS | 25.0% |
| !!! | TTTTAGGCATCTAAAATATG+AGG | - | chr1_2:63947798-63947817 | Msa0084470:five_prime_UTR | 25.0% |
| ! | TTCTACATTAGTCGAATTAT+TGG | + | chr1_2:63947910-63947929 | None:intergenic | 25.0% |
| ! | CGTATCAAAATTAAATGTGT+TGG | - | chr1_2:63948016-63948035 | Msa0084470:five_prime_UTR | 25.0% |
| AACTATGCAAATCAGTTCAA+TGG | - | chr1_2:63944981-63945000 | Msa0084470:three_prime_UTR | 30.0% | |
| AAGATGAAGAATTTCCGAAT+CGG | - | chr1_2:63945110-63945129 | Msa0084470:CDS | 30.0% | |
| TAAAACTCCTGAAAGATTTG+AGG | - | chr1_2:63945207-63945226 | Msa0084470:CDS | 30.0% | |
| AAAACTCCTGAAAGATTTGA+GGG | - | chr1_2:63945208-63945227 | Msa0084470:CDS | 30.0% | |
| GGAAGAAGAATTGATATAAG+AGG | - | chr1_2:63945233-63945252 | Msa0084470:CDS | 30.0% | |
| ! | TTCAAAATTTTCCTTCCAAC+TGG | - | chr1_2:63945311-63945330 | Msa0084470:CDS | 30.0% |
| AAAAGTAGTAACTAACCAGT+TGG | + | chr1_2:63945329-63945348 | None:intergenic | 30.0% | |
| ATCTCACTTTCAATTACGAT+TGG | - | chr1_2:63945432-63945451 | Msa0084470:CDS | 30.0% | |
| ! | ACAGAAAAGTGTGAACAAAT+GGG | + | chr1_2:63945586-63945605 | None:intergenic | 30.0% |
| ! | AACAGAAAAGTGTGAACAAA+TGG | + | chr1_2:63945587-63945606 | None:intergenic | 30.0% |
| TAACATGATGAACAACTACA+TGG | + | chr1_2:63945754-63945773 | None:intergenic | 30.0% | |
| ATATACGTATTGTATTGCTG+TGG | - | chr1_2:63945778-63945797 | Msa0084470:CDS | 30.0% | |
| CTTATTCTACTAAGTGTGAT+CGG | + | chr1_2:63946048-63946067 | None:intergenic | 30.0% | |
| ! | TTATGATGGAAAAGTACACA+AGG | - | chr1_2:63946149-63946168 | Msa0084470:intron | 30.0% |
| TAGAAGTTGAATCGTACTTT+AGG | - | chr1_2:63946199-63946218 | Msa0084470:intron | 30.0% | |
| GATCTATGTGAAGACATTTA+GGG | + | chr1_2:63946484-63946503 | None:intergenic | 30.0% | |
| AGATCTATGTGAAGACATTT+AGG | + | chr1_2:63946485-63946504 | None:intergenic | 30.0% | |
| AATGTCTTCACATAGATCTT+TGG | - | chr1_2:63946486-63946505 | Msa0084470:intron | 30.0% | |
| AATAACCTACAAGGTGATAA+GGG | + | chr1_2:63946596-63946615 | None:intergenic | 30.0% | |
| ! | ACTATCCTTGTTGTGATAAA+AGG | - | chr1_2:63946752-63946771 | Msa0084470:intron | 30.0% |
| ! | CTATCCTTGTTGTGATAAAA+GGG | - | chr1_2:63946753-63946772 | Msa0084470:intron | 30.0% |
| ! | TTTTCCCTTTTATCACAACA+AGG | + | chr1_2:63946760-63946779 | None:intergenic | 30.0% |
| TGTTGTGATAAAAGGGAAAA+AGG | - | chr1_2:63946760-63946779 | Msa0084470:intron | 30.0% | |
| GTGATATCAAACATATCCAA+AGG | + | chr1_2:63946815-63946834 | None:intergenic | 30.0% | |
| ATGAAGAAGTAATGGTTCTT+GGG | + | chr1_2:63946936-63946955 | None:intergenic | 30.0% | |
| TATGAAGAAGTAATGGTTCT+TGG | + | chr1_2:63946937-63946956 | None:intergenic | 30.0% | |
| !! | CAAGTGATAAACTTTTTGGT+TGG | + | chr1_2:63947002-63947021 | None:intergenic | 30.0% |
| CAACCAAAAAGTTTATCACT+TGG | - | chr1_2:63947000-63947019 | Msa0084470:intron | 30.0% | |
| ! | TCTCCAAGTGATAAACTTTT+TGG | + | chr1_2:63947006-63947025 | None:intergenic | 30.0% |
| AATATGTAACATAGCTAGAG+CGG | + | chr1_2:63947045-63947064 | None:intergenic | 30.0% | |
| AGCTATGTTACATATTCTAG+CGG | - | chr1_2:63947049-63947068 | Msa0084470:intron | 30.0% | |
| CAACAATAGAAAATAGAGAG+TGG | - | chr1_2:63947293-63947312 | Msa0084470:intron | 30.0% | |
| AATATATGTCATCACTAACG+AGG | - | chr1_2:63947345-63947364 | Msa0084470:intron | 30.0% | |
| ATCACAAATAACCAACCTAA+GGG | + | chr1_2:63947455-63947474 | None:intergenic | 30.0% | |
| TTTCAGTCTGACATAATTCA+TGG | + | chr1_2:63947545-63947564 | None:intergenic | 30.0% | |
| TTATGTCAGACTGAAAACTT+TGG | - | chr1_2:63947549-63947568 | Msa0084470:CDS | 30.0% | |
| TATGTCAGACTGAAAACTTT+GGG | - | chr1_2:63947550-63947569 | Msa0084470:CDS | 30.0% | |
| ACAATATGTAGCGTTTATTC+AGG | - | chr1_2:63947688-63947707 | Msa0084470:CDS | 30.0% | |
| CAATATGTAGCGTTTATTCA+GGG | - | chr1_2:63947689-63947708 | Msa0084470:CDS | 30.0% | |
| AATATGTAGCGTTTATTCAG+GGG | - | chr1_2:63947690-63947709 | Msa0084470:CDS | 30.0% | |
| ! | ATTGTACATTGTGTTACTCT+TGG | - | chr1_2:63947851-63947870 | Msa0084470:five_prime_UTR | 30.0% |
| CGAATTATTGGCAAACAAAA+AGG | + | chr1_2:63947898-63947917 | None:intergenic | 30.0% | |
| AGAAATAAATCGAGTGAAGG+AGG | + | chr1_2:63945020-63945039 | None:intergenic | 35.0% | |
| CCAAGAAATAAATCGAGTGA+AGG | + | chr1_2:63945023-63945042 | None:intergenic | 35.0% | |
| ! | CCTTCACTCGATTTATTTCT+TGG | - | chr1_2:63945020-63945039 | Msa0084470:exon | 35.0% |
| AGAGTGAAGAAGCTGTTTAA+AGG | - | chr1_2:63945266-63945285 | Msa0084470:CDS | 35.0% | |
| AGGCAATTGAAATACGACAT+TGG | + | chr1_2:63945491-63945510 | None:intergenic | 35.0% | |
| !! | GCTATTTCTATATGCCTCAT+TGG | - | chr1_2:63945957-63945976 | Msa0084470:CDS | 35.0% |
| CTTATCTACAAACGTAAGCT+TGG | - | chr1_2:63946247-63946266 | Msa0084470:intron | 35.0% | |
| ! | TGAAGACATTTAGGGTTGTT+TGG | + | chr1_2:63946476-63946495 | None:intergenic | 35.0% |
| TAAAACCCTTATCACCTTGT+AGG | - | chr1_2:63946588-63946607 | Msa0084470:intron | 35.0% | |
| GAATAACCTACAAGGTGATA+AGG | + | chr1_2:63946597-63946616 | None:intergenic | 35.0% | |
| AAAAGGGAAAAAGGTGAAGA+AGG | - | chr1_2:63946769-63946788 | Msa0084470:intron | 35.0% | |
| AGAGAACTATGAACTTCCTT+TGG | - | chr1_2:63946796-63946815 | Msa0084470:intron | 35.0% | |
| GGCGATATATGAAGAAGTAA+TGG | + | chr1_2:63946944-63946963 | None:intergenic | 35.0% | |
| TTGGTTGGGTATGCTAATAA+AGG | + | chr1_2:63946987-63947006 | None:intergenic | 35.0% | |
| AGTTTATCACTTGGAGATGA+TGG | - | chr1_2:63947009-63947028 | Msa0084470:intron | 35.0% | |
| TAAAGAAGAGTTACCTTCAG+AGG | + | chr1_2:63947155-63947174 | None:intergenic | 35.0% | |
| GTCTATCAATCTCGAAATTG+TGG | - | chr1_2:63947256-63947275 | Msa0084470:intron | 35.0% | |
| ATCAATCTCGAAATTGTGGA+TGG | - | chr1_2:63947260-63947279 | Msa0084470:intron | 35.0% | |
| TCAATCTCGAAATTGTGGAT+GGG | - | chr1_2:63947261-63947280 | Msa0084470:intron | 35.0% | |
| CATCACAAATAACCAACCTA+AGG | + | chr1_2:63947456-63947475 | None:intergenic | 35.0% | |
| AGCAACTCTGTGTATTACAT+TGG | - | chr1_2:63947655-63947674 | Msa0084470:CDS | 35.0% | |
| GATGAGATTCAAGAAGAGAT+GGG | + | chr1_2:63947747-63947766 | None:intergenic | 35.0% | |
| GAATCTCATCCTACAATTGT+TGG | - | chr1_2:63947757-63947776 | Msa0084470:exon | 35.0% | |
| TAGATGCCTAAAACACCAAT+CGG | + | chr1_2:63947791-63947810 | None:intergenic | 35.0% | |
| AGGAACAAGAAAACACGACA+GGG | + | chr1_2:63944881-63944900 | None:intergenic | 40.0% | |
| AAGGAACAAGAAAACACGAC+AGG | + | chr1_2:63944882-63944901 | None:intergenic | 40.0% | |
| CGATAAACTAGGGTTTCTCA+AGG | - | chr1_2:63945136-63945155 | Msa0084470:CDS | 40.0% | |
| GTAGTAACTAACCAGTTGGA+AGG | + | chr1_2:63945325-63945344 | None:intergenic | 40.0% | |
| CAATTACGATTGGCACTTCA+CGG | - | chr1_2:63945442-63945461 | Msa0084470:CDS | 40.0% | |
| ! | AACAAATGGGAAGTGCAGTA+AGG | + | chr1_2:63945573-63945592 | None:intergenic | 40.0% |
| !! | ATCGTACTTTAGGACCTGTT+TGG | - | chr1_2:63946209-63946228 | Msa0084470:intron | 40.0% |
| ! | GACGACCTATTTCAGTTTTC+CGG | - | chr1_2:63946854-63946873 | Msa0084470:intron | 40.0% |
| AAGAGTTACCTTCAGAGGTA+GGG | + | chr1_2:63947150-63947169 | None:intergenic | 40.0% | |
| ! | GCATTTGCTAAAAGCAAGCA+AGG | + | chr1_2:63947188-63947207 | None:intergenic | 40.0% |
| ! | TGCTTTTAGCAAATGCTCTG+AGG | - | chr1_2:63947192-63947211 | Msa0084470:intron | 40.0% |
| ! | CTCTGAGGAATTTGTCTTTG+TGG | - | chr1_2:63947207-63947226 | Msa0084470:intron | 40.0% |
| GAACTAGGAATTCCTATGAC+GGG | + | chr1_2:63947433-63947452 | None:intergenic | 40.0% | |
| GGAACTAGGAATTCCTATGA+CGG | + | chr1_2:63947434-63947453 | None:intergenic | 40.0% | |
| TAGGAATTCCTAGTTCCCTT+AGG | - | chr1_2:63947437-63947456 | Msa0084470:intron | 40.0% | |
| AATTCCTAGTTCCCTTAGGT+TGG | - | chr1_2:63947441-63947460 | Msa0084470:intron | 40.0% | |
| ATAACCAACCTAAGGGAACT+AGG | + | chr1_2:63947448-63947467 | None:intergenic | 40.0% | |
| GTACAGATCTGCACTTTCAT+TGG | + | chr1_2:63947506-63947525 | None:intergenic | 40.0% | |
| GGATGAGATTCAAGAAGAGA+TGG | + | chr1_2:63947748-63947767 | None:intergenic | 40.0% | |
| CTCATCCTACAATTGTTGGT+TGG | - | chr1_2:63947761-63947780 | Msa0084470:exon | 40.0% | |
| TTGCATAGTTGAACGAGCAG+CGG | + | chr1_2:63944971-63944990 | None:intergenic | 45.0% | |
| AATCGAGTGAAGGAGGATTG+AGG | + | chr1_2:63945013-63945032 | None:intergenic | 45.0% | |
| ! | CTAGTTTATCGTCGCCGATT+CGG | + | chr1_2:63945127-63945146 | None:intergenic | 45.0% |
| GAATCGGCGACGATAAACTA+GGG | - | chr1_2:63945126-63945145 | Msa0084470:CDS | 45.0% | |
| TTCCAGCCCTCAAATCTTTC+AGG | + | chr1_2:63945217-63945236 | None:intergenic | 45.0% | |
| AAATACGATGGTGCGATAGC+AGG | + | chr1_2:63945511-63945530 | None:intergenic | 45.0% | |
| GTATTGCTGTGGATCCTTGA+AGG | - | chr1_2:63945789-63945808 | Msa0084470:CDS | 45.0% | |
| ACACGCCGGAAAACTGAAAT+AGG | + | chr1_2:63946862-63946881 | None:intergenic | 45.0% | |
| AGAGTTACCTTCAGAGGTAG+GGG | + | chr1_2:63947149-63947168 | None:intergenic | 45.0% | |
| GAAGAGTTACCTTCAGAGGT+AGG | + | chr1_2:63947151-63947170 | None:intergenic | 45.0% | |
| !! | AGAGTGGGTTGTTGACTTTG+TGG | - | chr1_2:63947309-63947328 | Msa0084470:intron | 45.0% |
| ATCACTAACGAGGCGAAGAT+AGG | - | chr1_2:63947355-63947374 | Msa0084470:intron | 45.0% | |
| TCACTAACGAGGCGAAGATA+GGG | - | chr1_2:63947356-63947375 | Msa0084470:intron | 45.0% | |
| ATTGAGCAACCCGAACAAGT+GGG | - | chr1_2:63947624-63947643 | Msa0084470:CDS | 45.0% | |
| TCTCATATCCCCACTTGTTC+GGG | + | chr1_2:63947636-63947655 | None:intergenic | 45.0% | |
| CTCTCATATCCCCACTTGTT+CGG | + | chr1_2:63947637-63947656 | None:intergenic | 45.0% | |
| GCGTTCCAACCAACAATTGT+AGG | + | chr1_2:63947769-63947788 | None:intergenic | 45.0% | |
| TTGAACGAGCAGCGGTTGAA+GGG | + | chr1_2:63944963-63944982 | None:intergenic | 50.0% | |
| CGAATCGGCGACGATAAACT+AGG | - | chr1_2:63945125-63945144 | Msa0084470:CDS | 50.0% | |
| CTCCTGAAAGATTTGAGGGC+TGG | - | chr1_2:63945212-63945231 | Msa0084470:CDS | 50.0% | |
| TTTCCGGCGTGTGCAAGAAT+TGG | - | chr1_2:63946870-63946889 | Msa0084470:intron | 50.0% | |
| TCAATTCCCCCTACCTCTGA+AGG | - | chr1_2:63947139-63947158 | Msa0084470:intron | 50.0% | |
| GAGTTACCTTCAGAGGTAGG+GGG | + | chr1_2:63947148-63947167 | None:intergenic | 50.0% | |
| CACTAACGAGGCGAAGATAG+GGG | - | chr1_2:63947357-63947376 | Msa0084470:intron | 50.0% | |
| CATTGAGCAACCCGAACAAG+TGG | - | chr1_2:63947623-63947642 | Msa0084470:CDS | 50.0% | |
| TTGAGCAACCCGAACAAGTG+GGG | - | chr1_2:63947625-63947644 | Msa0084470:CDS | 50.0% | |
| ! | TTGTTGGTTGGAACGCCGAT+TGG | - | chr1_2:63947773-63947792 | Msa0084470:five_prime_UTR | 50.0% |
| !! | GGAACGCCGATTGGTGTTTT+AGG | - | chr1_2:63947782-63947801 | Msa0084470:five_prime_UTR | 50.0% |
| GTTGAACGAGCAGCGGTTGA+AGG | + | chr1_2:63944964-63944983 | None:intergenic | 55.0% | |
| CCTCCAATTCTTGCACACGC+CGG | + | chr1_2:63946876-63946895 | None:intergenic | 55.0% | |
| !! | CTGAGGAGTACTCCCGTCAT+AGG | - | chr1_2:63947418-63947437 | Msa0084470:intron | 55.0% |
| CCGGCGTGTGCAAGAATTGG+AGG | - | chr1_2:63946873-63946892 | Msa0084470:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 63944840 | 63948040 | 63944840 | ID=Msa0084470;Name=Msa0084470 |
| chr1_2 | mRNA | 63944840 | 63948040 | 63944840 | ID=Msa0084470-mRNA-1;Parent=Msa0084470;Name=Msa0084470-mRNA-1;_AED=0.01;_eAED=0.01;_QI=273|1|1|1|1|1|2|197|429 |
| chr1_2 | exon | 63944840 | 63946106 | 63944840 | ID=Msa0084470-mRNA-1:exon:21470;Parent=Msa0084470-mRNA-1 |
| chr1_2 | exon | 63947548 | 63948040 | 63947548 | ID=Msa0084470-mRNA-1:exon:21469;Parent=Msa0084470-mRNA-1 |
| chr1_2 | five_prime_UTR | 63947768 | 63948040 | 63947768 | ID=Msa0084470-mRNA-1:five_prime_utr;Parent=Msa0084470-mRNA-1 |
| chr1_2 | CDS | 63947548 | 63947767 | 63947548 | ID=Msa0084470-mRNA-1:cds;Parent=Msa0084470-mRNA-1 |
| chr1_2 | CDS | 63945037 | 63946106 | 63945037 | ID=Msa0084470-mRNA-1:cds;Parent=Msa0084470-mRNA-1 |
| chr1_2 | three_prime_UTR | 63944840 | 63945036 | 63944840 | ID=Msa0084470-mRNA-1:three_prime_utr;Parent=Msa0084470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
