Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086680 | sp|B9DFR3|PAE9_ARATH | 57.394 | 284 | 96 | 2 | 5 | 287 | 119 | 378 | 1.99e-111 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086680 | G7IAM1 | 78.761 | 339 | 11 | 3 | 2 | 303 | 120 | 434 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0086680 | Msa0133570 | 0.826865 | 2.145954e-54 | -8.615850e-47 |
| Msa0086680 | Msa0181520 | 0.853045 | 3.096195e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086680 | MtrunA17_Chr1g0203101 | 87.097 | 279 | 11 | 2 | 2 | 279 | 120 | 374 | 1.87e-178 | 499 |
| Msa0086680 | MtrunA17_Chr1g0203121 | 84.588 | 279 | 18 | 2 | 2 | 279 | 120 | 374 | 3.57e-172 | 483 |
| Msa0086680 | MtrunA17_Chr5g0408881 | 46.996 | 283 | 124 | 3 | 5 | 287 | 113 | 369 | 6.55e-89 | 272 |
| Msa0086680 | MtrunA17_Chr7g0270931 | 48.727 | 275 | 113 | 4 | 5 | 279 | 136 | 382 | 1.84e-85 | 264 |
| Msa0086680 | MtrunA17_Chr1g0193381 | 48.364 | 275 | 114 | 4 | 5 | 279 | 137 | 383 | 3.19e-85 | 261 |
| Msa0086680 | MtrunA17_Chr4g0069571 | 48.364 | 275 | 114 | 4 | 5 | 279 | 142 | 388 | 4.14e-85 | 261 |
| Msa0086680 | MtrunA17_Chr1g0193761 | 48.727 | 275 | 113 | 4 | 5 | 279 | 124 | 370 | 1.19e-83 | 257 |
| Msa0086680 | MtrunA17_Chr7g0271231 | 47.636 | 275 | 116 | 4 | 5 | 279 | 140 | 386 | 1.63e-82 | 255 |
| Msa0086680 | MtrunA17_Chr8g0369681 | 42.708 | 288 | 139 | 3 | 5 | 292 | 111 | 372 | 4.82e-81 | 251 |
| Msa0086680 | MtrunA17_Chr5g0418101 | 42.034 | 295 | 141 | 4 | 5 | 299 | 126 | 390 | 5.68e-77 | 240 |
| Msa0086680 | MtrunA17_Chr8g0369651 | 42.049 | 283 | 138 | 3 | 5 | 287 | 112 | 368 | 3.53e-75 | 235 |
| Msa0086680 | MtrunA17_Chr7g0238491 | 42.475 | 299 | 142 | 4 | 5 | 299 | 141 | 413 | 4.93e-75 | 236 |
| Msa0086680 | MtrunA17_Chr1g0163701 | 36.735 | 147 | 90 | 2 | 105 | 251 | 272 | 415 | 4.78e-21 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086680 | AT5G23870.1 | 57.394 | 284 | 96 | 2 | 5 | 287 | 119 | 378 | 7.57e-113 | 333 |
| Msa0086680 | AT5G23870.4 | 57.394 | 284 | 96 | 2 | 5 | 287 | 119 | 378 | 7.57e-113 | 333 |
| Msa0086680 | AT5G23870.2 | 57.394 | 284 | 96 | 2 | 5 | 287 | 119 | 378 | 9.48e-113 | 333 |
| Msa0086680 | AT5G23870.3 | 57.394 | 284 | 96 | 2 | 5 | 287 | 119 | 378 | 2.03e-112 | 333 |
| Msa0086680 | AT4G19420.1 | 47.292 | 277 | 120 | 3 | 5 | 281 | 109 | 359 | 2.73e-85 | 261 |
| Msa0086680 | AT4G19420.2 | 47.292 | 277 | 120 | 3 | 5 | 281 | 109 | 359 | 2.73e-85 | 261 |
| Msa0086680 | AT4G19420.4 | 47.445 | 274 | 118 | 3 | 5 | 278 | 109 | 356 | 7.57e-85 | 261 |
| Msa0086680 | AT2G46930.1 | 46.545 | 275 | 119 | 4 | 5 | 279 | 137 | 383 | 2.06e-84 | 260 |
| Msa0086680 | AT5G26670.3 | 45.085 | 295 | 134 | 4 | 5 | 299 | 19 | 285 | 5.60e-83 | 252 |
| Msa0086680 | AT5G26670.2 | 45.085 | 295 | 134 | 4 | 5 | 299 | 19 | 285 | 5.60e-83 | 252 |
| Msa0086680 | AT5G26670.4 | 45.085 | 295 | 134 | 4 | 5 | 299 | 19 | 285 | 5.60e-83 | 252 |
| Msa0086680 | AT5G45280.2 | 42.049 | 283 | 138 | 3 | 5 | 287 | 108 | 364 | 8.92e-82 | 252 |
| Msa0086680 | AT3G62060.1 | 44.364 | 275 | 125 | 4 | 5 | 279 | 139 | 385 | 1.17e-81 | 253 |
| Msa0086680 | AT5G26670.1 | 45.085 | 295 | 134 | 4 | 5 | 299 | 137 | 403 | 1.42e-81 | 253 |
| Msa0086680 | AT3G62060.2 | 44.364 | 275 | 125 | 4 | 5 | 279 | 139 | 385 | 2.05e-81 | 253 |
| Msa0086680 | AT4G19410.1 | 42.049 | 283 | 138 | 3 | 5 | 287 | 108 | 364 | 5.79e-81 | 250 |
| Msa0086680 | AT4G19410.2 | 42.049 | 283 | 138 | 3 | 5 | 287 | 108 | 364 | 6.51e-80 | 251 |
| Msa0086680 | AT3G09410.1 | 43.771 | 297 | 138 | 5 | 5 | 299 | 145 | 414 | 6.89e-80 | 249 |
| Msa0086680 | AT1G57590.1 | 46.182 | 275 | 120 | 4 | 5 | 279 | 164 | 410 | 1.52e-79 | 248 |
| Msa0086680 | AT3G05910.1 | 43.729 | 295 | 138 | 4 | 5 | 299 | 136 | 402 | 2.33e-79 | 247 |
| Msa0086680 | AT3G09410.3 | 45.652 | 276 | 121 | 5 | 5 | 278 | 145 | 393 | 3.13e-79 | 246 |
| Msa0086680 | AT3G09405.2 | 42.761 | 297 | 139 | 6 | 5 | 299 | 28 | 295 | 1.11e-74 | 231 |
| Msa0086680 | AT3G09405.1 | 42.761 | 297 | 139 | 6 | 5 | 299 | 135 | 402 | 6.13e-74 | 233 |
| Msa0086680 | AT1G09550.1 | 43.893 | 262 | 118 | 5 | 5 | 266 | 126 | 358 | 1.69e-71 | 226 |
| Msa0086680 | AT5G45280.1 | 47.739 | 199 | 103 | 1 | 5 | 203 | 108 | 305 | 2.69e-69 | 219 |
| Msa0086680 | AT3G05910.2 | 52.632 | 171 | 75 | 3 | 5 | 175 | 136 | 300 | 1.75e-53 | 177 |
| Msa0086680 | AT4G19420.3 | 50.968 | 155 | 72 | 2 | 5 | 159 | 109 | 259 | 5.35e-48 | 162 |
Find 86 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTTAGGCTTTGCTTTC+AGG | 0.097527 | 1_2:+67417122 | Msa0086680:intron |
| AGAATATGTTCTACTATTTA+TGG | 0.106510 | 1_2:-67420025 | None:intergenic |
| TGTGATGGAGCTTCATTTAC+TGG | 0.267705 | 1_2:+67416258 | Msa0086680:CDS |
| ACATGTTATTCTATAATCTT+AGG | 0.275717 | 1_2:+67419857 | Msa0086680:three_prime_UTR |
| TAGGAGATGGTAATTATTCT+TGG | 0.281191 | 1_2:+67419876 | Msa0086680:three_prime_UTR |
| CGTGCCTTTCCTAAACCTTT+TGG | 0.289937 | 1_2:-67417000 | None:intergenic |
| ACTTCAAAGGGCAAAAGATC+TGG | 0.309068 | 1_2:+67416953 | Msa0086680:CDS |
| CAAAAGTGTAGTTACATTGC+AGG | 0.311060 | 1_2:+67417395 | Msa0086680:CDS |
| ATCTAATGCAGAGGTTGCTT+TGG | 0.311189 | 1_2:-67419959 | None:intergenic |
| TCTGAGGTCCCTGAAGTAAA+AGG | 0.317093 | 1_2:+67419621 | Msa0086680:CDS |
| ACCTTGCAATGTATTAATTT+CGG | 0.323993 | 1_2:-67418621 | None:intergenic |
| GGAAACAGAGTGTTTAATAA+TGG | 0.332464 | 1_2:+67416279 | Msa0086680:CDS |
| TTGAAATGTTTCAGGTCATT+TGG | 0.335491 | 1_2:+67419553 | Msa0086680:intron |
| GAAACAGAGTGTTTAATAAT+GGG | 0.338755 | 1_2:+67416280 | Msa0086680:CDS |
| GACCTTCTGCCAAAAGGTTT+AGG | 0.343010 | 1_2:+67416991 | Msa0086680:CDS |
| TTGCTTTCAGGCTGCTCAGC+AGG | 0.346281 | 1_2:+67417134 | Msa0086680:CDS |
| TCGGTTGGTGTGCATGCCGC+TGG | 0.355452 | 1_2:-67418602 | None:intergenic |
| CAACTGATCCCCGCGGGCAC+TGG | 0.358393 | 1_2:+67418561 | Msa0086680:CDS |
| AGATAGAAAATTCTTGATAA+AGG | 0.369727 | 1_2:+67419705 | Msa0086680:three_prime_UTR |
| TCAACAGTTCCATAATATAT+TGG | 0.377679 | 1_2:+67418529 | Msa0086680:intron |
| CAGCATCGTGTATACTTGTA+TGG | 0.379573 | 1_2:-67419673 | None:intergenic |
| TGGCAGAAGGTCGGCAATCA+TGG | 0.403904 | 1_2:-67416980 | None:intergenic |
| TTACTTCAGGGACCTCAGAT+AGG | 0.410752 | 1_2:-67419617 | None:intergenic |
| GCTGTTTGAATAAAAGTAGA+AGG | 0.434575 | 1_2:-67418888 | None:intergenic |
| AGCATTGGTTGGCAAATACT+TGG | 0.436879 | 1_2:-67417192 | None:intergenic |
| TCATGGAAACATACCAGGTC+TGG | 0.440369 | 1_2:-67418269 | None:intergenic |
| CTGTTCCAGTTGTAAAAGTC+TGG | 0.452582 | 1_2:-67416219 | None:intergenic |
| TTTACTTGATAACAATCAAT+CGG | 0.453039 | 1_2:+67419798 | Msa0086680:three_prime_UTR |
| GGGACCTCAGATAGGAGAAC+TGG | 0.454637 | 1_2:-67419609 | None:intergenic |
| CAACAAGGCTTTACTTCAAA+GGG | 0.455205 | 1_2:+67416941 | Msa0086680:CDS |
| TGCCCGCGGGGATCAGTTGA+AGG | 0.458324 | 1_2:-67418557 | None:intergenic |
| ATCAATAAATGTGAGATTGA+TGG | 0.463585 | 1_2:-67418662 | None:intergenic |
| CTTCAAAGGGCAAAAGATCT+GGG | 0.469533 | 1_2:+67416954 | Msa0086680:CDS |
| AAGGTGGCACCAATATATTA+TGG | 0.471691 | 1_2:-67418538 | None:intergenic |
| CAAGCATTTAACACTAGCAT+TGG | 0.472012 | 1_2:-67417207 | None:intergenic |
| CATTTAACACTAGCATTGGT+TGG | 0.475055 | 1_2:-67417203 | None:intergenic |
| AGGAGAACTGGAAAGCTTGT+TGG | 0.480009 | 1_2:-67419597 | None:intergenic |
| ACAACAAGGCTTTACTTCAA+AGG | 0.493096 | 1_2:+67416940 | Msa0086680:CDS |
| ATGTATCTTGCGATTCACTT+TGG | 0.497371 | 1_2:-67418946 | None:intergenic |
| TATTACTTGGAATACATCAT+AGG | 0.501457 | 1_2:-67418414 | None:intergenic |
| CTTTCAGGCTGCTCAGCAGG+AGG | 0.503743 | 1_2:+67417137 | Msa0086680:CDS |
| GAATCGCAAGATACATGGTC+TGG | 0.503955 | 1_2:+67418953 | Msa0086680:CDS |
| GTTAAATGCTTGAGTGATGC+AGG | 0.505103 | 1_2:+67417218 | Msa0086680:CDS |
| ATTGCCGACCTTCTGCCAAA+AGG | 0.505225 | 1_2:+67416985 | Msa0086680:CDS |
| ATATATTTCAACACATATTG+TGG | 0.506570 | 1_2:-67418362 | None:intergenic |
| TGCAATGTATTAATTTCGGT+TGG | 0.513028 | 1_2:-67418617 | None:intergenic |
| CTACGTCGAGGACCTGAGAT+AGG | 0.513822 | 1_2:-67420062 | None:intergenic |
| CGCGATGTCTTATCCAGACC+TGG | 0.516745 | 1_2:+67418256 | Msa0086680:CDS |
| GTGAGGCACTGACCTATCTC+AGG | 0.518278 | 1_2:+67420050 | Msa0086680:three_prime_UTR |
| TGCAGTGGATCCAGTGCCCG+CGG | 0.520565 | 1_2:-67418571 | None:intergenic |
| TCCCTGAAGTAAAAGGATAG+AGG | 0.528649 | 1_2:+67419628 | Msa0086680:CDS |
| GAGATGGTAATTATTCTTGG+TGG | 0.538096 | 1_2:+67419879 | Msa0086680:three_prime_UTR |
| TATACACGATGCTGAATGCT+AGG | 0.543263 | 1_2:+67419682 | Msa0086680:three_prime_UTR |
| AGTCTTTAACATACCCATCA+AGG | 0.547152 | 1_2:-67417247 | None:intergenic |
| CGGTTGGTGTGCATGCCGCT+GGG | 0.549514 | 1_2:-67418601 | None:intergenic |
| ACCGAAATTAATACATTGCA+AGG | 0.551704 | 1_2:+67418620 | Msa0086680:CDS |
| CTGTTTGAATAAAAGTAGAA+GGG | 0.555728 | 1_2:-67418887 | None:intergenic |
| AAAGTGAATCGCAAGATACA+TGG | 0.555987 | 1_2:+67418948 | Msa0086680:CDS |
| GCAGTGGATCCAGTGCCCGC+GGG | 0.558493 | 1_2:-67418570 | None:intergenic |
| CTTTCCAGTTCTCCTATCTG+AGG | 0.560373 | 1_2:+67419605 | Msa0086680:CDS |
| AAGTCTGGTACAACAGTCAA+AGG | 0.561095 | 1_2:-67416204 | None:intergenic |
| CCGCTGGGTCCTTCTTGCAG+TGG | 0.564311 | 1_2:-67418586 | None:intergenic |
| GGTCATTTGGAAGATCAGAC+TGG | 0.567993 | 1_2:+67419566 | Msa0086680:intron |
| CCCTGAAGTAAAAGGATAGA+GGG | 0.570039 | 1_2:+67419629 | Msa0086680:exon |
| TGATGGCAGATAATTGAAAG+AGG | 0.575004 | 1_2:-67418645 | None:intergenic |
| AGGTTTAGGAAAGGCACGCA+AGG | 0.588900 | 1_2:+67417005 | Msa0086680:CDS |
| TATTCTATAATCTTAGGAGA+TGG | 0.595192 | 1_2:+67419863 | Msa0086680:three_prime_UTR |
| CACCTTCAACTGATCCCCGC+GGG | 0.601505 | 1_2:+67418555 | Msa0086680:CDS |
| TGAGATCAGAAATAGGCTGT+AGG | 0.610940 | 1_2:-67420088 | None:intergenic |
| GCACTGGATCCACTGCAAGA+AGG | 0.615507 | 1_2:+67418577 | Msa0086680:CDS |
| CCGCGGGGATCAGTTGAAGG+TGG | 0.619197 | 1_2:-67418554 | None:intergenic |
| AAACAGAGTGTTTAATAATG+GGG | 0.626272 | 1_2:+67416281 | Msa0086680:CDS |
| GATGGCAGATAATTGAAAGA+GGG | 0.633095 | 1_2:-67418644 | None:intergenic |
| TCTGCCAAAAGGTTTAGGAA+AGG | 0.633220 | 1_2:+67416996 | Msa0086680:CDS |
| AGTAGAACATATTCTTAGTG+AGG | 0.635715 | 1_2:+67420033 | Msa0086680:three_prime_UTR |
| CAGTGGATCCAGTGCCCGCG+GGG | 0.640240 | 1_2:-67418569 | None:intergenic |
| GAAGTTGTCACAGTGGTGAA+AGG | 0.641338 | 1_2:-67417168 | None:intergenic |
| CCACCTTCAACTGATCCCCG+CGG | 0.665500 | 1_2:+67418554 | Msa0086680:CDS |
| GGCTGTAGGCATCTACGTCG+AGG | 0.666737 | 1_2:-67420074 | None:intergenic |
| GTGATGAAAATCAGACAACA+AGG | 0.673926 | 1_2:+67416926 | Msa0086680:intron |
| GTCTGGATAAGACATCGCGT+TGG | 0.686083 | 1_2:-67418252 | None:intergenic |
| GTGAAGCTGAGATACTGTGA+TGG | 0.689447 | 1_2:+67416243 | Msa0086680:CDS |
| GTTGTCACAGTGGTGAAAGG+TGG | 0.697162 | 1_2:-67417165 | None:intergenic |
| GTGCTACATTCTGATTACCG+CGG | 0.727094 | 1_2:-67419994 | None:intergenic |
| CCACTGCAAGAAGGACCCAG+CGG | 0.729935 | 1_2:+67418586 | Msa0086680:CDS |
| ACTTGGTGAAGTTGTCACAG+TGG | 0.810181 | 1_2:-67417175 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAAATTTATGTACAA+AGG | + | chr1_2:67416372-67416391 | Msa0086680:intron | 10.0% |
| !! | ATTTGAAAAAATTCAATATA+GGG | - | chr1_2:67418132-67418151 | None:intergenic | 10.0% |
| !! | AATTTGAAAAAATTCAATAT+AGG | - | chr1_2:67418133-67418152 | None:intergenic | 10.0% |
| !!! | AGAACTACAATATTTTTTTA+AGG | - | chr1_2:67419489-67419508 | None:intergenic | 15.0% |
| !! | TAACATTAAAATGAATCACA+AGG | + | chr1_2:67416401-67416420 | Msa0086680:intron | 20.0% |
| !!! | TTTTAACGTTTTTCAAAGAT+AGG | + | chr1_2:67416458-67416477 | Msa0086680:intron | 20.0% |
| !!! | ATTGATATCGATTTAAACAA+CGG | + | chr1_2:67416613-67416632 | Msa0086680:intron | 20.0% |
| !! | TTATAATTATTGATCCTTGA+TGG | + | chr1_2:67416825-67416844 | Msa0086680:intron | 20.0% |
| !! | AACACAAGTATGTATATAAA+TGG | - | chr1_2:67417438-67417457 | None:intergenic | 20.0% |
| !!! | TTATATACATACTTGTGTTT+TGG | + | chr1_2:67417439-67417458 | Msa0086680:intron | 20.0% |
| !!! | AATGATTTTGATACAAGATT+TGG | + | chr1_2:67417681-67417700 | Msa0086680:intron | 20.0% |
| !!! | TTTACTGATTATTTTTCTTC+TGG | - | chr1_2:67417858-67417877 | None:intergenic | 20.0% |
| !! | GAAATAACACAAATGATATA+AGG | + | chr1_2:67417883-67417902 | Msa0086680:intron | 20.0% |
| !! | ATATCTTATGAAATAGAGAA+AGG | + | chr1_2:67418091-67418110 | Msa0086680:intron | 20.0% |
| !! | ATATATTTCAACACATATTG+TGG | - | chr1_2:67418365-67418384 | None:intergenic | 20.0% |
| !! | CATTATATTAAACTCATAGT+TGG | + | chr1_2:67418477-67418496 | Msa0086680:intron | 20.0% |
| !!! | ATGAAATTTGAACTTGTTTA+TGG | - | chr1_2:67418783-67418802 | None:intergenic | 20.0% |
| !! | AAAAAATATTGTAGTTCTCT+TGG | + | chr1_2:67419491-67419510 | Msa0086680:intron | 20.0% |
| !! | AGATAGAAAATTCTTGATAA+AGG | + | chr1_2:67419705-67419724 | Msa0086680:three_prime_UTR | 20.0% |
| !!! | TTTACTTGATAACAATCAAT+CGG | + | chr1_2:67419798-67419817 | Msa0086680:three_prime_UTR | 20.0% |
| !! | ACATGTTATTCTATAATCTT+AGG | + | chr1_2:67419857-67419876 | Msa0086680:three_prime_UTR | 20.0% |
| !! | AGAATATGTTCTACTATTTA+TGG | - | chr1_2:67420028-67420047 | None:intergenic | 20.0% |
| !!! | TATTTTATGAGATCAGAAAT+AGG | - | chr1_2:67420098-67420117 | None:intergenic | 20.0% |
| !! | GAAACAGAGTGTTTAATAAT+GGG | + | chr1_2:67416280-67416299 | Msa0086680:CDS | 25.0% |
| !! | AAACAGAGTGTTTAATAATG+GGG | + | chr1_2:67416281-67416300 | Msa0086680:CDS | 25.0% |
| ! | AAATGAATCACAAGGATATT+TGG | + | chr1_2:67416409-67416428 | Msa0086680:intron | 25.0% |
| ! | AATGAATCACAAGGATATTT+GGG | + | chr1_2:67416410-67416429 | Msa0086680:intron | 25.0% |
| !! | ATTTGGGTTAATTATCTTCA+TGG | + | chr1_2:67416426-67416445 | Msa0086680:intron | 25.0% |
| !! | TTTTAAATATTAGTCCACGA+TGG | - | chr1_2:67416515-67416534 | None:intergenic | 25.0% |
| !!! | ACTTTTGAAAAAGTATCTCA+TGG | - | chr1_2:67417382-67417401 | None:intergenic | 25.0% |
| ! | GTAATAAGAAATCCTAATAG+AGG | - | chr1_2:67417912-67417931 | None:intergenic | 25.0% |
| ! | ATTTACACAATACACATCAT+TGG | - | chr1_2:67417987-67418006 | None:intergenic | 25.0% |
| ! | ATGATGTGTATTGTGTAAAT+AGG | + | chr1_2:67417987-67418006 | Msa0086680:intron | 25.0% |
| !! | ACTATGCTTTTCATTTCATT+GGG | - | chr1_2:67418014-67418033 | None:intergenic | 25.0% |
| ! | TATTACTTGGAATACATCAT+AGG | - | chr1_2:67418417-67418436 | None:intergenic | 25.0% |
| ! | TCAACAGTTCCATAATATAT+TGG | + | chr1_2:67418529-67418548 | Msa0086680:intron | 25.0% |
| ! | ACCTTGCAATGTATTAATTT+CGG | - | chr1_2:67418624-67418643 | None:intergenic | 25.0% |
| ! | ATCAATAAATGTGAGATTGA+TGG | - | chr1_2:67418665-67418684 | None:intergenic | 25.0% |
| ! | CTGTTTGAATAAAAGTAGAA+GGG | - | chr1_2:67418890-67418909 | None:intergenic | 25.0% |
| !!! | TTCTACTTTTATTCAAACAG+CGG | + | chr1_2:67418890-67418909 | Msa0086680:CDS | 25.0% |
| ! | TTCTCCAAGAATAAAAAACA+CGG | + | chr1_2:67418982-67419001 | Msa0086680:CDS | 25.0% |
| !! | TGAGATTCTAACTAATTTGT+TGG | + | chr1_2:67419055-67419074 | Msa0086680:intron | 25.0% |
| ! | GATATGTGTATAATTGGAAA+AGG | + | chr1_2:67419135-67419154 | Msa0086680:intron | 25.0% |
| ! | GGTATTAAATTATGTAATGC+AGG | - | chr1_2:67419450-67419469 | None:intergenic | 25.0% |
| ! | TAATTTAATACCTTAAGCTC+AGG | + | chr1_2:67419458-67419477 | Msa0086680:intron | 25.0% |
| ! | TATTCTATAATCTTAGGAGA+TGG | + | chr1_2:67419863-67419882 | Msa0086680:three_prime_UTR | 25.0% |
| ! | AACTTAAAAATCTAATGCAG+AGG | - | chr1_2:67419971-67419990 | None:intergenic | 25.0% |
| ! | GGAAACAGAGTGTTTAATAA+TGG | + | chr1_2:67416279-67416298 | Msa0086680:CDS | 30.0% |
| !! | TCATGAGTTCTATTTCTGAA+CGG | + | chr1_2:67416771-67416790 | Msa0086680:intron | 30.0% |
| GTTGCTCTTTATGAAAGTTT+AGG | + | chr1_2:67417040-67417059 | Msa0086680:intron | 30.0% | |
| ! | ACCAACTTTGTATGTTGTTT+AGG | + | chr1_2:67417109-67417128 | Msa0086680:intron | 30.0% |
| GACTCAAAATAGAGAAAAGA+GGG | - | chr1_2:67417279-67417298 | None:intergenic | 30.0% | |
| TGACTCAAAATAGAGAAAAG+AGG | - | chr1_2:67417280-67417299 | None:intergenic | 30.0% | |
| TATAAATGGCGCATTATTGA+AGG | - | chr1_2:67417424-67417443 | None:intergenic | 30.0% | |
| TACATTTATATGCTTCCTGA+AGG | + | chr1_2:67417485-67417504 | Msa0086680:intron | 30.0% | |
| AGATGAAAGCGATTAATAGA+CGG | + | chr1_2:67417534-67417553 | Msa0086680:intron | 30.0% | |
| TCGGTTGTTGAAAGTTATTT+GGG | - | chr1_2:67417774-67417793 | None:intergenic | 30.0% | |
| TTCGGTTGTTGAAAGTTATT+TGG | - | chr1_2:67417775-67417794 | None:intergenic | 30.0% | |
| AGAAGTAGGTTTATGAAACT+TGG | + | chr1_2:67417806-67417825 | Msa0086680:intron | 30.0% | |
| AGGTTTATGAAACTTGGAAT+TGG | + | chr1_2:67417812-67417831 | Msa0086680:intron | 30.0% | |
| TTACAATATTAGTTGCTGAG+TGG | + | chr1_2:67417928-67417947 | Msa0086680:intron | 30.0% | |
| ! | CACTATGCTTTTCATTTCAT+TGG | - | chr1_2:67418015-67418034 | None:intergenic | 30.0% |
| TTCCATAAGAGAAAGAAAAG+TGG | + | chr1_2:67418151-67418170 | Msa0086680:intron | 30.0% | |
| TCCATAAGAGAAAGAAAAGT+GGG | + | chr1_2:67418152-67418171 | Msa0086680:intron | 30.0% | |
| !!! | ATAGTTTTGTCTTGTGTAAC+AGG | + | chr1_2:67418199-67418218 | Msa0086680:intron | 30.0% |
| !!! | TAGTTTTGTCTTGTGTAACA+GGG | + | chr1_2:67418200-67418219 | Msa0086680:intron | 30.0% |
| GCAGAGTTCAAGATAAAAAA+CGG | - | chr1_2:67418395-67418414 | None:intergenic | 30.0% | |
| TGCAATGTATTAATTTCGGT+TGG | - | chr1_2:67418620-67418639 | None:intergenic | 30.0% | |
| ACCGAAATTAATACATTGCA+AGG | + | chr1_2:67418620-67418639 | Msa0086680:CDS | 30.0% | |
| GAGTAAAGTGCATTGAATTA+AGG | - | chr1_2:67418833-67418852 | None:intergenic | 30.0% | |
| TAATTCAATGCACTTTACTC+AGG | + | chr1_2:67418833-67418852 | Msa0086680:intron | 30.0% | |
| GCTGTTTGAATAAAAGTAGA+AGG | - | chr1_2:67418891-67418910 | None:intergenic | 30.0% | |
| !! | TCTACTTTTATTCAAACAGC+GGG | + | chr1_2:67418891-67418910 | Msa0086680:CDS | 30.0% |
| !! | TGTTTTGTTGTCAAAGAGAT+TGG | - | chr1_2:67419010-67419029 | None:intergenic | 30.0% |
| GAATCTCACATACAATAAAC+AGG | - | chr1_2:67419043-67419062 | None:intergenic | 30.0% | |
| TTTGAGTAGTTATCAGAAGT+TGG | - | chr1_2:67419110-67419129 | None:intergenic | 30.0% | |
| ACCTACGATATGTGTATAAT+TGG | + | chr1_2:67419129-67419148 | Msa0086680:intron | 30.0% | |
| TCCAATTATACACATATCGT+AGG | - | chr1_2:67419133-67419152 | None:intergenic | 30.0% | |
| ATAATTGGAAAAGGAATCTG+AGG | + | chr1_2:67419144-67419163 | Msa0086680:intron | 30.0% | |
| CAAAATTTGAGTCTTACACT+TGG | + | chr1_2:67419234-67419253 | Msa0086680:intron | 30.0% | |
| ! | TGAGTTTTTAATCAGCAACA+TGG | + | chr1_2:67419296-67419315 | Msa0086680:intron | 30.0% |
| ! | TTTTAGTAGAAACAGAAGCA+AGG | + | chr1_2:67419371-67419390 | Msa0086680:intron | 30.0% |
| ! | TTGAAATGTTTCAGGTCATT+TGG | + | chr1_2:67419553-67419572 | Msa0086680:intron | 30.0% |
| TAGGAGATGGTAATTATTCT+TGG | + | chr1_2:67419876-67419895 | Msa0086680:three_prime_UTR | 30.0% | |
| !!! | TAGATTTTTAAGTTATGCCG+CGG | + | chr1_2:67419977-67419996 | Msa0086680:three_prime_UTR | 30.0% |
| AGTAGAACATATTCTTAGTG+AGG | + | chr1_2:67420033-67420052 | Msa0086680:three_prime_UTR | 30.0% | |
| ! | TTGTACCAGACTTTTACAAC+TGG | + | chr1_2:67416214-67416233 | Msa0086680:CDS | 35.0% |
| ! | AGACTTTTACAACTGGAACA+GGG | + | chr1_2:67416221-67416240 | Msa0086680:CDS | 35.0% |
| ! | AATATGAGCCACTTTACTCT+AGG | + | chr1_2:67416488-67416507 | Msa0086680:intron | 35.0% |
| ! | CTCTTGGTAGTAGATGTTAA+TGG | + | chr1_2:67416568-67416587 | Msa0086680:intron | 35.0% |
| !! | AGTTCTATTTCTGAACGGTA+TGG | + | chr1_2:67416776-67416795 | Msa0086680:intron | 35.0% |
| GTGATGAAAATCAGACAACA+AGG | + | chr1_2:67416926-67416945 | Msa0086680:intron | 35.0% | |
| ACAACAAGGCTTTACTTCAA+AGG | + | chr1_2:67416940-67416959 | Msa0086680:CDS | 35.0% | |
| CAACAAGGCTTTACTTCAAA+GGG | + | chr1_2:67416941-67416960 | Msa0086680:CDS | 35.0% | |
| GCCTAAACAACATACAAAGT+TGG | - | chr1_2:67417113-67417132 | None:intergenic | 35.0% | |
| !! | CATTTAACACTAGCATTGGT+TGG | - | chr1_2:67417206-67417225 | None:intergenic | 35.0% |
| CAAGCATTTAACACTAGCAT+TGG | - | chr1_2:67417210-67417229 | None:intergenic | 35.0% | |
| !!! | ATGCAGGTTTTTTCCTTGAT+GGG | + | chr1_2:67417234-67417253 | Msa0086680:CDS | 35.0% |
| AGTCTTTAACATACCCATCA+AGG | - | chr1_2:67417250-67417269 | None:intergenic | 35.0% | |
| ACATCTCTTCTGCAAAAAGA+GGG | - | chr1_2:67417345-67417364 | None:intergenic | 35.0% | |
| !! | TGAAAAAGTATCTCATGGTG+TGG | - | chr1_2:67417377-67417396 | None:intergenic | 35.0% |
| ! | CAAAAGTGTAGTTACATTGC+AGG | + | chr1_2:67417395-67417414 | Msa0086680:CDS | 35.0% |
| ! | TACTTCTTCAGTTGTTGGTT+CGG | - | chr1_2:67417793-67417812 | None:intergenic | 35.0% |
| AAACCTACTTCTTCAGTTGT+TGG | - | chr1_2:67417798-67417817 | None:intergenic | 35.0% | |
| TGGCATACAAATCTTCACAA+AGG | - | chr1_2:67417838-67417857 | None:intergenic | 35.0% | |
| GATATAAGGAAGCCTCTATT+AGG | + | chr1_2:67417897-67417916 | Msa0086680:intron | 35.0% | |
| ! | TGAAAAGCATAGTGCTCAAA+TGG | + | chr1_2:67418021-67418040 | Msa0086680:intron | 35.0% |
| TCAATATAGGGAATAGCATG+TGG | - | chr1_2:67418120-67418139 | None:intergenic | 35.0% | |
| !! | ACCCACTTTTCTTTCTCTTA+TGG | - | chr1_2:67418156-67418175 | None:intergenic | 35.0% |
| AAAAGTGGGTAACAGTAAAC+AGG | + | chr1_2:67418166-67418185 | Msa0086680:intron | 35.0% | |
| !! | AGTTTTGTCTTGTGTAACAG+GGG | + | chr1_2:67418201-67418220 | Msa0086680:intron | 35.0% |
| GCATCTCAGAAACTATTACT+TGG | - | chr1_2:67418430-67418449 | None:intergenic | 35.0% | |
| AAGGTGGCACCAATATATTA+TGG | - | chr1_2:67418541-67418560 | None:intergenic | 35.0% | |
| GATGGCAGATAATTGAAAGA+GGG | - | chr1_2:67418647-67418666 | None:intergenic | 35.0% | |
| TGATGGCAGATAATTGAAAG+AGG | - | chr1_2:67418648-67418667 | None:intergenic | 35.0% | |
| ! | ATGCACTTTACTCAGGTTTT+AGG | + | chr1_2:67418840-67418859 | Msa0086680:intron | 35.0% |
| !! | CTACTTTTATTCAAACAGCG+GGG | + | chr1_2:67418892-67418911 | Msa0086680:CDS | 35.0% |
| ! | TACTTTTATTCAAACAGCGG+GGG | + | chr1_2:67418893-67418912 | Msa0086680:CDS | 35.0% |
| ATGTATCTTGCGATTCACTT+TGG | - | chr1_2:67418949-67418968 | None:intergenic | 35.0% | |
| AAAGTGAATCGCAAGATACA+TGG | + | chr1_2:67418948-67418967 | Msa0086680:CDS | 35.0% | |
| !!! | GGTACCGTGTTTTTTATTCT+TGG | - | chr1_2:67418989-67419008 | None:intergenic | 35.0% |
| AAATTATGTAATGCAGGAGC+AGG | - | chr1_2:67419444-67419463 | None:intergenic | 35.0% | |
| TTCAAACTGAGTCAGATCAA+TGG | - | chr1_2:67419538-67419557 | None:intergenic | 35.0% | |
| ! | GACTCAGTTTGAAATGTTTC+AGG | + | chr1_2:67419545-67419564 | Msa0086680:intron | 35.0% |
| ! | TTTTGTCTGGTATCTGAAGA+AGG | + | chr1_2:67419822-67419841 | Msa0086680:three_prime_UTR | 35.0% |
| GAGATGGTAATTATTCTTGG+TGG | + | chr1_2:67419879-67419898 | Msa0086680:three_prime_UTR | 35.0% | |
| CTGTTCCAGTTGTAAAAGTC+TGG | - | chr1_2:67416222-67416241 | None:intergenic | 40.0% | |
| ! | CAGACTTTTACAACTGGAAC+AGG | + | chr1_2:67416220-67416239 | Msa0086680:CDS | 40.0% |
| ! | TGTGATGGAGCTTCATTTAC+TGG | + | chr1_2:67416258-67416277 | Msa0086680:CDS | 40.0% |
| ACCTCTTCTTGCTTATGTAG+TGG | + | chr1_2:67416865-67416884 | Msa0086680:intron | 40.0% | |
| ACCACTACATAAGCAAGAAG+AGG | - | chr1_2:67416869-67416888 | None:intergenic | 40.0% | |
| ACTTCAAAGGGCAAAAGATC+TGG | + | chr1_2:67416953-67416972 | Msa0086680:CDS | 40.0% | |
| CTTCAAAGGGCAAAAGATCT+GGG | + | chr1_2:67416954-67416973 | Msa0086680:CDS | 40.0% | |
| ! | TAAACCTTTTGGCAGAAGGT+CGG | - | chr1_2:67416992-67417011 | None:intergenic | 40.0% |
| ! | TTCCTAAACCTTTTGGCAGA+AGG | - | chr1_2:67416996-67417015 | None:intergenic | 40.0% |
| TCTGCCAAAAGGTTTAGGAA+AGG | + | chr1_2:67416996-67417015 | Msa0086680:CDS | 40.0% | |
| GTTGTTTAGGCTTTGCTTTC+AGG | + | chr1_2:67417122-67417141 | Msa0086680:intron | 40.0% | |
| !! | AGCATTGGTTGGCAAATACT+TGG | - | chr1_2:67417195-67417214 | None:intergenic | 40.0% |
| GTTAAATGCTTGAGTGATGC+AGG | + | chr1_2:67417218-67417237 | Msa0086680:CDS | 40.0% | |
| !!! | GATGCAGGTTTTTTCCTTGA+TGG | + | chr1_2:67417233-67417252 | Msa0086680:CDS | 40.0% |
| ! | TGCAAAAAGAGGGTGCAAAA+GGG | - | chr1_2:67417335-67417354 | None:intergenic | 40.0% |
| GACATCTCTTCTGCAAAAAG+AGG | - | chr1_2:67417346-67417365 | None:intergenic | 40.0% | |
| TTCCTGAAGGAGAAATTTCG+AGG | + | chr1_2:67417498-67417517 | Msa0086680:intron | 40.0% | |
| AACCTCGAAATTTCTCCTTC+AGG | - | chr1_2:67417503-67417522 | None:intergenic | 40.0% | |
| GAACCAACAACTGAAGAAGT+AGG | + | chr1_2:67417792-67417811 | Msa0086680:intron | 40.0% | |
| ! | GTTTTGTCTTGTGTAACAGG+GGG | + | chr1_2:67418202-67418221 | Msa0086680:intron | 40.0% |
| ! | CGTTGGTGCAGTTTTTATTC+AGG | - | chr1_2:67418238-67418257 | None:intergenic | 40.0% |
| CAAGTTCATGGAAACATACC+AGG | - | chr1_2:67418277-67418296 | None:intergenic | 40.0% | |
| GAGCTAATGATGCAAGTTCA+TGG | - | chr1_2:67418289-67418308 | None:intergenic | 40.0% | |
| TGAACTTGCATCATTAGCTC+AGG | + | chr1_2:67418289-67418308 | Msa0086680:intron | 40.0% | |
| CAAGTTGTATCGCATGGATA+TGG | - | chr1_2:67419408-67419427 | None:intergenic | 40.0% | |
| TTACGACAAGTTGTATCGCA+TGG | - | chr1_2:67419414-67419433 | None:intergenic | 40.0% | |
| ! | TAAGGCATTACCTGAGCTTA+AGG | - | chr1_2:67419471-67419490 | None:intergenic | 40.0% |
| TGTAGTTCTCTTGGATACCA+TGG | + | chr1_2:67419500-67419519 | Msa0086680:intron | 40.0% | |
| TCCCTGAAGTAAAAGGATAG+AGG | + | chr1_2:67419628-67419647 | Msa0086680:CDS | 40.0% | |
| ! | CCCTCTATCCTTTTACTTCA+GGG | - | chr1_2:67419632-67419651 | None:intergenic | 40.0% |
| CCCTGAAGTAAAAGGATAGA+GGG | + | chr1_2:67419629-67419648 | Msa0086680:exon | 40.0% | |
| ! | ACCCTCTATCCTTTTACTTC+AGG | - | chr1_2:67419633-67419652 | None:intergenic | 40.0% |
| CAGCATCGTGTATACTTGTA+TGG | - | chr1_2:67419676-67419695 | None:intergenic | 40.0% | |
| TATACACGATGCTGAATGCT+AGG | + | chr1_2:67419682-67419701 | Msa0086680:three_prime_UTR | 40.0% | |
| !! | ACAATCAATCGGCTTTTGTC+TGG | + | chr1_2:67419809-67419828 | Msa0086680:three_prime_UTR | 40.0% |
| ATCTAATGCAGAGGTTGCTT+TGG | - | chr1_2:67419962-67419981 | None:intergenic | 40.0% | |
| TGAGATCAGAAATAGGCTGT+AGG | - | chr1_2:67420091-67420110 | None:intergenic | 40.0% | |
| GTGAAGCTGAGATACTGTGA+TGG | + | chr1_2:67416243-67416262 | Msa0086680:CDS | 45.0% | |
| ACGATGGACCTAGAGTAAAG+TGG | - | chr1_2:67416499-67416518 | None:intergenic | 45.0% | |
| ACTTTACTCTAGGTCCATCG+TGG | + | chr1_2:67416498-67416517 | Msa0086680:intron | 45.0% | |
| CGACGATAAACTTCGTCTCT+TGG | + | chr1_2:67416552-67416571 | Msa0086680:intron | 45.0% | |
| GACCTTCTGCCAAAAGGTTT+AGG | + | chr1_2:67416991-67417010 | Msa0086680:CDS | 45.0% | |
| ! | CGTGCCTTTCCTAAACCTTT+TGG | - | chr1_2:67417003-67417022 | None:intergenic | 45.0% |
| GAAGTTGTCACAGTGGTGAA+AGG | - | chr1_2:67417171-67417190 | None:intergenic | 45.0% | |
| ! | ACTTGGTGAAGTTGTCACAG+TGG | - | chr1_2:67417178-67417197 | None:intergenic | 45.0% |
| ! | CTGCAAAAAGAGGGTGCAAA+AGG | - | chr1_2:67417336-67417355 | None:intergenic | 45.0% |
| TGCAACTTGCAAGTTGCAAC+TGG | - | chr1_2:67417637-67417656 | None:intergenic | 45.0% | |
| TCATGGAAACATACCAGGTC+TGG | - | chr1_2:67418272-67418291 | None:intergenic | 45.0% | |
| GAATCGCAAGATACATGGTC+TGG | + | chr1_2:67418953-67418972 | Msa0086680:CDS | 45.0% | |
| CAGACTATTGCAGAAGCAGT+CGG | + | chr1_2:67419339-67419358 | Msa0086680:intron | 45.0% | |
| AATGGACGATAAACTCGCCA+TGG | - | chr1_2:67419520-67419539 | None:intergenic | 45.0% | |
| GGTCATTTGGAAGATCAGAC+TGG | + | chr1_2:67419566-67419585 | Msa0086680:intron | 45.0% | |
| AGGAGAACTGGAAAGCTTGT+TGG | - | chr1_2:67419600-67419619 | None:intergenic | 45.0% | |
| CTTTCCAGTTCTCCTATCTG+AGG | + | chr1_2:67419605-67419624 | Msa0086680:CDS | 45.0% | |
| TTACTTCAGGGACCTCAGAT+AGG | - | chr1_2:67419620-67419639 | None:intergenic | 45.0% | |
| ! | TCTGAGGTCCCTGAAGTAAA+AGG | + | chr1_2:67419621-67419640 | Msa0086680:CDS | 45.0% |
| GTGCTACATTCTGATTACCG+CGG | - | chr1_2:67419997-67420016 | None:intergenic | 45.0% | |
| GCAAGAAGAGGTGAGCTCTT+CGG | - | chr1_2:67416857-67416876 | None:intergenic | 50.0% | |
| ATTGCCGACCTTCTGCCAAA+AGG | + | chr1_2:67416985-67417004 | Msa0086680:CDS | 50.0% | |
| ! | AGGTTTAGGAAAGGCACGCA+AGG | + | chr1_2:67417005-67417024 | Msa0086680:CDS | 50.0% |
| GTTGTCACAGTGGTGAAAGG+TGG | - | chr1_2:67417168-67417187 | None:intergenic | 50.0% | |
| ! | GAGGGTGCAAAAGGGATTGT+TGG | - | chr1_2:67417327-67417346 | None:intergenic | 50.0% |
| GTCTGGATAAGACATCGCGT+TGG | - | chr1_2:67418255-67418274 | None:intergenic | 50.0% | |
| TTGCAGAAGCAGTCGGTGAT+TGG | + | chr1_2:67419346-67419365 | Msa0086680:intron | 50.0% | |
| ! | CTCTTCGGTGTGGTCCATCA+AGG | - | chr1_2:67416842-67416861 | None:intergenic | 55.0% |
| AAGAGGTGAGCTCTTCGGTG+TGG | - | chr1_2:67416852-67416871 | None:intergenic | 55.0% | |
| TGGCAGAAGGTCGGCAATCA+TGG | - | chr1_2:67416983-67417002 | None:intergenic | 55.0% | |
| TTGCTTTCAGGCTGCTCAGC+AGG | + | chr1_2:67417134-67417153 | Msa0086680:CDS | 55.0% | |
| CGCGATGTCTTATCCAGACC+TGG | + | chr1_2:67418256-67418275 | Msa0086680:CDS | 55.0% | |
| GCACTGGATCCACTGCAAGA+AGG | + | chr1_2:67418577-67418596 | Msa0086680:CDS | 55.0% | |
| GGGACCTCAGATAGGAGAAC+TGG | - | chr1_2:67419612-67419631 | None:intergenic | 55.0% | |
| !! | GTGAGGCACTGACCTATCTC+AGG | + | chr1_2:67420050-67420069 | Msa0086680:three_prime_UTR | 55.0% |
| CTACGTCGAGGACCTGAGAT+AGG | - | chr1_2:67420065-67420084 | None:intergenic | 55.0% | |
| CTTTCAGGCTGCTCAGCAGG+AGG | + | chr1_2:67417137-67417156 | Msa0086680:CDS | 60.0% | |
| CCACCTTCAACTGATCCCCG+CGG | + | chr1_2:67418554-67418573 | Msa0086680:CDS | 60.0% | |
| CACCTTCAACTGATCCCCGC+GGG | + | chr1_2:67418555-67418574 | Msa0086680:CDS | 60.0% | |
| CCACTGCAAGAAGGACCCAG+CGG | + | chr1_2:67418586-67418605 | Msa0086680:CDS | 60.0% | |
| GGCTGTAGGCATCTACGTCG+AGG | - | chr1_2:67420077-67420096 | None:intergenic | 60.0% | |
| CCGCGGGGATCAGTTGAAGG+TGG | - | chr1_2:67418557-67418576 | None:intergenic | 65.0% | |
| TGCCCGCGGGGATCAGTTGA+AGG | - | chr1_2:67418560-67418579 | None:intergenic | 65.0% | |
| TGCAGTGGATCCAGTGCCCG+CGG | - | chr1_2:67418574-67418593 | None:intergenic | 65.0% | |
| CCGCTGGGTCCTTCTTGCAG+TGG | - | chr1_2:67418589-67418608 | None:intergenic | 65.0% | |
| ! | CGGTTGGTGTGCATGCCGCT+GGG | - | chr1_2:67418604-67418623 | None:intergenic | 65.0% |
| ! | TCGGTTGGTGTGCATGCCGC+TGG | - | chr1_2:67418605-67418624 | None:intergenic | 65.0% |
| CAACTGATCCCCGCGGGCAC+TGG | + | chr1_2:67418561-67418580 | Msa0086680:CDS | 70.0% | |
| CAGTGGATCCAGTGCCCGCG+GGG | - | chr1_2:67418572-67418591 | None:intergenic | 70.0% | |
| GCAGTGGATCCAGTGCCCGC+GGG | - | chr1_2:67418573-67418592 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 67416207 | 67420135 | 67416207 | ID=Msa0086680;Name=Msa0086680 |
| chr1_2 | mRNA | 67416207 | 67420135 | 67416207 | ID=Msa0086680-mRNA-1;Parent=Msa0086680;Name=Msa0086680-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.62|0.66|1|0.5|0.66|9|488|303 |
| chr1_2 | exon | 67416207 | 67416302 | 67416207 | ID=Msa0086680-mRNA-1:exon:22887;Parent=Msa0086680-mRNA-1 |
| chr1_2 | exon | 67416940 | 67417026 | 67416940 | ID=Msa0086680-mRNA-1:exon:22888;Parent=Msa0086680-mRNA-1 |
| chr1_2 | exon | 67417131 | 67417255 | 67417131 | ID=Msa0086680-mRNA-1:exon:22889;Parent=Msa0086680-mRNA-1 |
| chr1_2 | exon | 67417356 | 67417416 | 67417356 | ID=Msa0086680-mRNA-1:exon:22890;Parent=Msa0086680-mRNA-1 |
| chr1_2 | exon | 67418221 | 67418277 | 67418221 | ID=Msa0086680-mRNA-1:exon:22891;Parent=Msa0086680-mRNA-1 |
| chr1_2 | exon | 67418353 | 67418430 | 67418353 | ID=Msa0086680-mRNA-1:exon:22892;Parent=Msa0086680-mRNA-1 |
| chr1_2 | exon | 67418536 | 67418713 | 67418536 | ID=Msa0086680-mRNA-1:exon:22893;Parent=Msa0086680-mRNA-1 |
| chr1_2 | exon | 67418855 | 67419003 | 67418855 | ID=Msa0086680-mRNA-1:exon:22894;Parent=Msa0086680-mRNA-1 |
| chr1_2 | exon | 67419567 | 67420135 | 67419567 | ID=Msa0086680-mRNA-1:exon:22895;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67416207 | 67416302 | 67416207 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67416940 | 67417026 | 67416940 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67417131 | 67417255 | 67417131 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67417356 | 67417416 | 67417356 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67418221 | 67418277 | 67418221 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67418353 | 67418430 | 67418353 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67418536 | 67418713 | 67418536 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67418855 | 67419003 | 67418855 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | CDS | 67419567 | 67419647 | 67419567 | ID=Msa0086680-mRNA-1:cds;Parent=Msa0086680-mRNA-1 |
| chr1_2 | three_prime_UTR | 67419648 | 67420135 | 67419648 | ID=Msa0086680-mRNA-1:three_prime_utr;Parent=Msa0086680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
