Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181520 | KEH43697.1 | 86.909 | 275 | 26 | 3 | 1 | 273 | 10 | 276 | 6.01e-171 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181520 | sp|B9DFR3|PAE9_ARATH | 63.492 | 252 | 90 | 2 | 1 | 252 | 8 | 257 | 3.93e-113 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181520 | A0A072VPF8 | 86.909 | 275 | 26 | 3 | 1 | 273 | 10 | 276 | 2.87e-171 | 489 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030310 | Msa0181520 | 0.813781 | 2.151751e-51 | -8.615850e-47 |
| Msa0032370 | Msa0181520 | 0.818051 | 2.398369e-52 | -8.615850e-47 |
| Msa0069260 | Msa0181520 | 0.838681 | 2.488427e-57 | -8.615850e-47 |
| Msa0069280 | Msa0181520 | 0.847510 | 1.105249e-59 | -8.615850e-47 |
| Msa0069310 | Msa0181520 | 0.827684 | 1.365490e-54 | -8.615850e-47 |
| Msa0086680 | Msa0181520 | 0.853045 | 3.096195e-61 | -8.615850e-47 |
| Msa0086710 | Msa0181520 | 0.895103 | 1.317314e-75 | -8.615850e-47 |
| Msa0096670 | Msa0181520 | 0.802085 | 6.632752e-49 | -8.615850e-47 |
| Msa0098390 | Msa0181520 | -0.801559 | 8.505389e-49 | -8.615850e-47 |
| Msa0104610 | Msa0181520 | 0.800843 | 1.191405e-48 | -8.615850e-47 |
| Msa0113160 | Msa0181520 | 0.805949 | 1.042503e-49 | -8.615850e-47 |
| Msa0115830 | Msa0181520 | 0.817679 | 2.909635e-52 | -8.615850e-47 |
| Msa0131200 | Msa0181520 | 0.808178 | 3.518057e-50 | -8.615850e-47 |
| Msa0133570 | Msa0181520 | 0.855114 | 7.839577e-62 | -8.615850e-47 |
| Msa0145950 | Msa0181520 | 0.811980 | 5.336077e-51 | -8.615850e-47 |
| Msa0172350 | Msa0181520 | 0.836913 | 7.080841e-57 | -8.615850e-47 |
| Msa0181520 | Msa0185590 | 0.801094 | 1.058801e-48 | -8.615850e-47 |
| Msa0181520 | Msa0189950 | 0.814489 | 1.501159e-51 | -8.615850e-47 |
| Msa0181520 | Msa0212750 | -0.806922 | 6.500483e-50 | -8.615850e-47 |
| Msa0181520 | Msa0259560 | 0.807905 | 4.023468e-50 | -8.615850e-47 |
| Msa0181520 | Msa0267760 | 0.828257 | 9.938750e-55 | -8.615850e-47 |
| Msa0181520 | Msa0275400 | -0.820096 | 8.215324e-53 | -8.615850e-47 |
| Msa0181520 | Msa0307110 | 0.820480 | 6.710153e-53 | -8.615850e-47 |
| Msa0181520 | Msa0315150 | 0.803115 | 4.066889e-49 | -8.615850e-47 |
| Msa0181520 | Msa0377530 | 0.807060 | 6.078123e-50 | -8.615850e-47 |
| Msa0181520 | Msa0426810 | 0.809464 | 1.868270e-50 | -8.615850e-47 |
| Msa0181520 | Msa0429520 | -0.829549 | 4.837640e-55 | -8.615850e-47 |
| Msa0181520 | Msa0436280 | -0.806730 | 7.137398e-50 | -8.615850e-47 |
| Msa0181520 | Msa0469910 | -0.806675 | 7.330117e-50 | -8.615850e-47 |
| Msa0181520 | Msa0506940 | 0.816726 | 4.765852e-52 | -8.615850e-47 |
| Msa0181520 | Msa0517490 | 0.805233 | 1.473787e-49 | -8.615850e-47 |
| Msa0181520 | Msa0526700 | 0.809634 | 1.717607e-50 | -8.615850e-47 |
| Msa0181520 | Msa0526710 | 0.826779 | 2.249678e-54 | -8.615850e-47 |
| Msa0181520 | Msa0542160 | 0.803496 | 3.391160e-49 | -8.615850e-47 |
| Msa0181520 | Msa0576980 | 0.804966 | 1.675808e-49 | -8.615850e-47 |
| Msa0181520 | Msa0638690 | 0.821602 | 3.700746e-53 | -8.615850e-47 |
| Msa0181520 | Msa0642650 | 0.816792 | 4.607603e-52 | -8.615850e-47 |
| Msa0181520 | Msa0708080 | 0.807692 | 4.463855e-50 | -8.615850e-47 |
| Msa0181520 | Msa0743680 | 0.836377 | 9.698493e-57 | -8.615850e-47 |
| Msa0181520 | Msa0784620 | 0.869979 | 2.062822e-66 | -8.615850e-47 |
| Msa0181520 | Msa0824730 | 0.855942 | 4.497055e-62 | -8.615850e-47 |
| Msa0181520 | Msa0852730 | 0.801796 | 7.604168e-49 | -8.615850e-47 |
| Msa0181520 | Msa0863800 | 0.846384 | 2.247095e-59 | -8.615850e-47 |
| Msa0181520 | Msa0881480 | 0.825298 | 5.059127e-54 | -8.615850e-47 |
| Msa0181520 | Msa0903330 | 0.800628 | 1.318056e-48 | -8.615850e-47 |
| Msa0181520 | Msa0958020 | 0.807150 | 5.817337e-50 | -8.615850e-47 |
| Msa0181520 | Msa0985550 | 0.836526 | 8.885219e-57 | -8.615850e-47 |
| Msa0181520 | Msa0993530 | 0.803814 | 2.913167e-49 | -8.615850e-47 |
| Msa0181520 | Msa1154670 | 0.803422 | 3.511911e-49 | -8.615850e-47 |
| Msa0181520 | Msa1221900 | 0.813685 | 2.258084e-51 | -8.615850e-47 |
| Msa0181520 | Msa1236070 | -0.810893 | 9.189392e-51 | -8.615850e-47 |
| Msa0181520 | Msa1237030 | 0.811362 | 7.273285e-51 | -8.615850e-47 |
| Msa0181520 | Msa1246530 | -0.802646 | 5.081983e-49 | -8.615850e-47 |
| Msa0181520 | Msa1269580 | -0.811377 | 7.216055e-51 | -8.615850e-47 |
| Msa0181520 | Msa1337730 | 0.827499 | 1.512977e-54 | -8.615850e-47 |
| Msa0181520 | Msa1362510 | 0.802678 | 5.005931e-49 | -8.615850e-47 |
| Msa0181520 | Msa1373510 | 0.817562 | 3.092127e-52 | -8.615850e-47 |
| Msa0181520 | Msa1390230 | 0.816979 | 4.183000e-52 | -8.615850e-47 |
| Msa0181520 | Msa1390310 | 0.843358 | 1.472091e-58 | -8.615850e-47 |
| Msa0181520 | Msa1398860 | 0.821312 | 4.316911e-53 | -8.615850e-47 |
| Msa0181520 | Msa1429360 | -0.804331 | 2.274196e-49 | -8.615850e-47 |
| Msa0181520 | Msa1442220 | -0.823632 | 1.247653e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181520 | MtrunA17_Chr1g0203101 | 86.909 | 275 | 26 | 3 | 1 | 273 | 10 | 276 | 1.80e-174 | 488 |
| Msa0181520 | MtrunA17_Chr1g0203101 | 96.875 | 32 | 1 | 0 | 251 | 282 | 373 | 404 | 2.04e-14 | 73.2 |
| Msa0181520 | MtrunA17_Chr1g0203121 | 86.909 | 275 | 26 | 3 | 1 | 273 | 10 | 276 | 2.32e-174 | 488 |
| Msa0181520 | MtrunA17_Chr1g0203121 | 87.500 | 32 | 4 | 0 | 251 | 282 | 373 | 404 | 7.17e-12 | 65.5 |
| Msa0181520 | MtrunA17_Chr1g0193381 | 54.237 | 236 | 101 | 2 | 25 | 255 | 49 | 282 | 3.98e-87 | 266 |
| Msa0181520 | MtrunA17_Chr4g0069571 | 52.119 | 236 | 106 | 2 | 25 | 255 | 54 | 287 | 3.67e-84 | 259 |
| Msa0181520 | MtrunA17_Chr7g0270931 | 54.751 | 221 | 98 | 1 | 25 | 245 | 48 | 266 | 4.06e-84 | 260 |
| Msa0181520 | MtrunA17_Chr5g0408881 | 51.724 | 232 | 107 | 1 | 28 | 254 | 28 | 259 | 4.11e-84 | 259 |
| Msa0181520 | MtrunA17_Chr1g0193761 | 54.751 | 221 | 98 | 1 | 25 | 245 | 36 | 254 | 8.67e-83 | 255 |
| Msa0181520 | MtrunA17_Chr7g0271231 | 54.795 | 219 | 97 | 1 | 27 | 245 | 54 | 270 | 6.24e-81 | 251 |
| Msa0181520 | MtrunA17_Chr7g0238491 | 52.889 | 225 | 104 | 2 | 21 | 244 | 48 | 271 | 8.80e-80 | 248 |
| Msa0181520 | MtrunA17_Chr5g0418101 | 46.531 | 245 | 122 | 2 | 28 | 272 | 41 | 276 | 9.09e-78 | 242 |
| Msa0181520 | MtrunA17_Chr8g0369651 | 44.485 | 272 | 141 | 3 | 1 | 272 | 1 | 262 | 3.05e-76 | 238 |
| Msa0181520 | MtrunA17_Chr8g0369681 | 46.025 | 239 | 119 | 1 | 8 | 246 | 16 | 244 | 1.19e-73 | 231 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181520 | AT5G23870.1 | 63.492 | 252 | 90 | 2 | 1 | 252 | 8 | 257 | 2.08e-114 | 336 |
| Msa0181520 | AT5G23870.4 | 63.492 | 252 | 90 | 2 | 1 | 252 | 8 | 257 | 2.08e-114 | 336 |
| Msa0181520 | AT5G23870.2 | 63.492 | 252 | 90 | 2 | 1 | 252 | 8 | 257 | 2.62e-114 | 337 |
| Msa0181520 | AT5G23870.3 | 63.492 | 252 | 90 | 2 | 1 | 252 | 8 | 257 | 4.00e-114 | 337 |
| Msa0181520 | AT4G19420.3 | 52.119 | 236 | 113 | 0 | 11 | 246 | 7 | 242 | 4.37e-86 | 260 |
| Msa0181520 | AT2G46930.1 | 53.540 | 226 | 103 | 1 | 20 | 245 | 44 | 267 | 4.89e-85 | 261 |
| Msa0181520 | AT4G19420.1 | 52.119 | 236 | 113 | 0 | 11 | 246 | 7 | 242 | 1.64e-84 | 259 |
| Msa0181520 | AT4G19420.2 | 52.119 | 236 | 113 | 0 | 11 | 246 | 7 | 242 | 1.64e-84 | 259 |
| Msa0181520 | AT3G62060.1 | 52.995 | 217 | 100 | 1 | 29 | 245 | 55 | 269 | 2.22e-84 | 260 |
| Msa0181520 | AT3G62060.2 | 52.995 | 217 | 100 | 1 | 29 | 245 | 55 | 269 | 2.56e-84 | 261 |
| Msa0181520 | AT4G19420.4 | 52.119 | 236 | 113 | 0 | 11 | 246 | 7 | 242 | 2.85e-84 | 260 |
| Msa0181520 | AT1G57590.1 | 53.540 | 226 | 103 | 1 | 20 | 245 | 71 | 294 | 3.26e-82 | 255 |
| Msa0181520 | AT3G05910.2 | 52.863 | 227 | 104 | 2 | 19 | 245 | 43 | 266 | 1.82e-80 | 246 |
| Msa0181520 | AT5G26670.1 | 54.545 | 220 | 98 | 1 | 27 | 246 | 51 | 268 | 2.80e-80 | 249 |
| Msa0181520 | AT4G19410.1 | 49.550 | 222 | 111 | 1 | 29 | 250 | 24 | 244 | 1.34e-79 | 246 |
| Msa0181520 | AT3G09410.3 | 52.778 | 216 | 99 | 2 | 29 | 242 | 61 | 275 | 1.91e-79 | 246 |
| Msa0181520 | AT3G05910.1 | 54.338 | 219 | 97 | 2 | 27 | 245 | 51 | 266 | 5.84e-79 | 246 |
| Msa0181520 | AT3G09410.1 | 52.778 | 216 | 99 | 2 | 29 | 242 | 61 | 275 | 9.99e-79 | 246 |
| Msa0181520 | AT4G19410.2 | 49.550 | 222 | 111 | 1 | 29 | 250 | 24 | 244 | 1.98e-78 | 247 |
| Msa0181520 | AT5G45280.1 | 47.748 | 222 | 115 | 1 | 29 | 250 | 24 | 244 | 3.16e-78 | 243 |
| Msa0181520 | AT5G45280.2 | 47.748 | 222 | 115 | 1 | 29 | 250 | 24 | 244 | 3.67e-78 | 243 |
| Msa0181520 | AT3G09405.1 | 50.000 | 228 | 111 | 2 | 20 | 245 | 42 | 268 | 1.85e-75 | 236 |
| Msa0181520 | AT1G09550.1 | 48.387 | 217 | 110 | 1 | 27 | 243 | 40 | 254 | 2.68e-72 | 228 |
| Msa0181520 | AT3G09405.2 | 50.617 | 162 | 77 | 2 | 87 | 246 | 2 | 162 | 2.95e-50 | 168 |
| Msa0181520 | AT5G26670.3 | 55.263 | 152 | 66 | 1 | 95 | 246 | 1 | 150 | 3.38e-48 | 163 |
| Msa0181520 | AT5G26670.2 | 55.263 | 152 | 66 | 1 | 95 | 246 | 1 | 150 | 3.38e-48 | 163 |
| Msa0181520 | AT5G26670.4 | 55.263 | 152 | 66 | 1 | 95 | 246 | 1 | 150 | 3.38e-48 | 163 |
Find 118 sgRNAs with CRISPR-Local
Find 580 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTTAGGCTTTGCTTTC+AGG | 0.097527 | 1_4:+69760132 | Msa0181520:intron |
| AGAATATGTTCTACTATTTA+TGG | 0.106510 | 1_4:-69763035 | None:intergenic |
| ACCCTTGAAGTTCTCATATT+TGG | 0.163453 | 1_4:-69756990 | None:intergenic |
| TGTGATGGAGCTTCATTTAC+TGG | 0.267705 | 1_4:+69759269 | Msa0181520:CDS |
| ACATGTTATTCTATAATCTT+AGG | 0.275717 | 1_4:+69762867 | Msa0181520:three_prime_UTR |
| TAGGAGATGGTAATTATTCT+TGG | 0.281191 | 1_4:+69762886 | Msa0181520:three_prime_UTR |
| TATCACTTGGACAGAGGATT+TGG | 0.284388 | 1_4:+69753369 | Msa0181520:CDS |
| CGTGCCTTTCCTAAACCTTT+TGG | 0.289937 | 1_4:-69760010 | None:intergenic |
| AAATCGAGGCTTCATTGATT+TGG | 0.300538 | 1_4:-69752895 | None:intergenic |
| ATGGTAAATCACAATGGATT+TGG | 0.303540 | 1_4:-69752955 | None:intergenic |
| TTATTATTGAATGAATATAT+TGG | 0.304331 | 1_4:-69752623 | None:intergenic |
| ACTTCAAAGGGCAAAAGATC+TGG | 0.309068 | 1_4:+69759963 | Msa0181520:CDS |
| TAATTAATTTATTATTGTTA+TGG | 0.310108 | 1_4:+69752858 | Msa0181520:five_prime_UTR |
| CAAAAGTGTAGTTACATTGC+AGG | 0.311060 | 1_4:+69760405 | Msa0181520:CDS |
| ATCTAATGCAGAGGTTGCTT+TGG | 0.311189 | 1_4:-69762969 | None:intergenic |
| TCTGAGGTCCCTGAAGTAAA+AGG | 0.317093 | 1_4:+69762631 | Msa0181520:exon |
| ACCCACCATCAAACAGAATA+TGG | 0.318619 | 1_4:-69752536 | None:intergenic |
| CACGCTCAATCTAAGGTAAA+AGG | 0.320487 | 1_4:-69752788 | None:intergenic |
| GGAAACAGAGTGTTTAATAA+TGG | 0.332464 | 1_4:+69759290 | Msa0181520:CDS |
| TTGAAATGTTTCAGGTCATT+TGG | 0.335491 | 1_4:+69762563 | Msa0181520:intron |
| GAAACAGAGTGTTTAATAAT+GGG | 0.338755 | 1_4:+69759291 | Msa0181520:CDS |
| GACCTTCTGCCAAAAGGTTT+AGG | 0.343010 | 1_4:+69760001 | Msa0181520:CDS |
| TTGATCCATATTCTGTTTGA+TGG | 0.344076 | 1_4:+69752531 | Msa0181520:five_prime_UTR |
| TTGCTTTCAGGCTGCTCAGC+AGG | 0.346281 | 1_4:+69760144 | Msa0181520:CDS |
| TGTTTGTAGAAAGCTTTATA+AGG | 0.348198 | 1_4:-69752688 | None:intergenic |
| TAAAACGCACGCTCAATCTA+AGG | 0.363709 | 1_4:-69752795 | None:intergenic |
| AGATAGAAAATTCTTGATAA+AGG | 0.369727 | 1_4:+69762715 | Msa0181520:three_prime_UTR |
| TTGTTTGGATGGGAGTTTAC+CGG | 0.373038 | 1_4:+69753344 | Msa0181520:CDS |
| TTAAAAGAATATTGAAGAAA+TGG | 0.375798 | 1_4:-69752974 | None:intergenic |
| CAAGTTGTATCGCATGGATA+TGG | 0.379269 | 1_4:-69762415 | None:intergenic |
| CAGCATCGTGTATACTTGTA+TGG | 0.379573 | 1_4:-69762683 | None:intergenic |
| GAAAGAAACGTAAACGGAAA+TGG | 0.395921 | 1_4:-69752933 | None:intergenic |
| AGGTTGATAGAATAGAAATA+TGG | 0.402353 | 1_4:-69752768 | None:intergenic |
| TGGCAGAAGGTCGGCAATCA+TGG | 0.403904 | 1_4:-69759990 | None:intergenic |
| TTACTTCAGGGACCTCAGAT+AGG | 0.410752 | 1_4:-69762627 | None:intergenic |
| CAATTGGCTTCTACAATTTG+AGG | 0.416598 | 1_4:+69753404 | Msa0181520:CDS |
| GTGTAAATTTATAGTTTGTT+TGG | 0.418128 | 1_4:+69753329 | Msa0181520:intron |
| TTGGAGCTGGTAAAGACAAT+TGG | 0.426944 | 1_4:+69753388 | Msa0181520:CDS |
| AGCATTGGTTGGCAAATACT+TGG | 0.436879 | 1_4:-69760202 | None:intergenic |
| TCATGGAAACATACCAGGTC+TGG | 0.440369 | 1_4:-69761279 | None:intergenic |
| AAATTTATAGTTTGTTTGGA+TGG | 0.442549 | 1_4:+69753333 | Msa0181520:intron |
| TATTGATTTACCTGGATTAA+CGG | 0.447581 | 1_4:-69757032 | None:intergenic |
| TTGCAGAAGCAGTCGGTGAT+TGG | 0.453696 | 1_4:+69762356 | Msa0181520:CDS |
| GGGACCTCAGATAGGAGAAC+TGG | 0.454637 | 1_4:-69762619 | None:intergenic |
| CAACAAGGCTTTACTTCAAA+GGG | 0.455205 | 1_4:+69759951 | Msa0181520:CDS |
| AAAAGAAAGAGAAGCGTGAA+AGG | 0.456845 | 1_4:-69752730 | None:intergenic |
| TTTACTTGATAGCAATCAAT+CGG | 0.458128 | 1_4:+69762808 | Msa0181520:three_prime_UTR |
| GTTAACAACGCACGTGAAAC+CGG | 0.458646 | 1_4:+69753235 | Msa0181520:CDS |
| CTTCAAAGGGCAAAAGATCT+GGG | 0.469533 | 1_4:+69759964 | Msa0181520:CDS |
| CAAGCATTTAACACTAGCAT+TGG | 0.472012 | 1_4:-69760217 | None:intergenic |
| CATTTAACACTAGCATTGGT+TGG | 0.475055 | 1_4:-69760213 | None:intergenic |
| TCCATATTCTGTTTGATGGT+GGG | 0.479201 | 1_4:+69752535 | Msa0181520:five_prime_UTR |
| AGGAGAACTGGAAAGCTTGT+TGG | 0.480009 | 1_4:-69762607 | None:intergenic |
| TATGGTACTTGCCAGGGAGG+TGG | 0.482699 | 1_4:+69756899 | Msa0181520:intron |
| TGGAGAGAGCGCAAACCCGC+AGG | 0.486391 | 1_4:+69756948 | Msa0181520:CDS |
| AATTTATAGTTTGTTTGGAT+GGG | 0.489051 | 1_4:+69753334 | Msa0181520:intron |
| ACAACAAGGCTTTACTTCAA+AGG | 0.493096 | 1_4:+69759950 | Msa0181520:CDS |
| CTTTCAGGCTGCTCAGCAGG+AGG | 0.503743 | 1_4:+69760147 | Msa0181520:CDS |
| GACCAAATATGAGAACTTCA+AGG | 0.504679 | 1_4:+69756988 | Msa0181520:CDS |
| GTTAAATGCTTGAGTGATGC+AGG | 0.505103 | 1_4:+69760228 | Msa0181520:CDS |
| ATTGCCGACCTTCTGCCAAA+AGG | 0.505225 | 1_4:+69759995 | Msa0181520:CDS |
| ATCCATATTCTGTTTGATGG+TGG | 0.513206 | 1_4:+69752534 | Msa0181520:five_prime_UTR |
| CTACGTCGAGGACCTGAGAT+AGG | 0.513822 | 1_4:-69763072 | None:intergenic |
| CGCGATGTCTTATCCAGACC+TGG | 0.516745 | 1_4:+69761266 | Msa0181520:CDS |
| CAATGACTTGAAATCATGCT+TGG | 0.518177 | 1_4:+69756928 | Msa0181520:CDS |
| GTGAGGCACTGACCTATCTC+AGG | 0.518278 | 1_4:+69763060 | Msa0181520:three_prime_UTR |
| AACAATGCTACCGTTAATCC+AGG | 0.520859 | 1_4:+69757022 | Msa0181520:CDS |
| GTAATTTGTTGAACCCCTGC+GGG | 0.527566 | 1_4:-69756963 | None:intergenic |
| TCCCTGAAGTAAAAGGATAG+AGG | 0.528649 | 1_4:+69762638 | Msa0181520:three_prime_UTR |
| GAGTTTACCGGCATATCACT+TGG | 0.533687 | 1_4:+69753356 | Msa0181520:CDS |
| GAGATGGTAATTATTCTTGG+TGG | 0.538096 | 1_4:+69762889 | Msa0181520:three_prime_UTR |
| GATTTGGAAAGAAACGTAAA+CGG | 0.538893 | 1_4:-69752939 | None:intergenic |
| TATACACGATGCTGAATGCT+AGG | 0.543263 | 1_4:+69762692 | Msa0181520:three_prime_UTR |
| TTAATTGAACTTACAAGCAC+CGG | 0.546058 | 1_4:-69753254 | None:intergenic |
| AGTCTTTAACATACCCATCA+AGG | 0.547152 | 1_4:-69760257 | None:intergenic |
| TTGGACAGAGGATTTGGAGC+TGG | 0.551803 | 1_4:+69753375 | Msa0181520:CDS |
| TGTAATTTGTTGAACCCCTG+CGG | 0.557536 | 1_4:-69756964 | None:intergenic |
| GGAGTGTGTGTGGTGTGGAA+TGG | 0.557904 | 1_4:-69752559 | None:intergenic |
| CTTTCCAGTTCTCCTATCTG+AGG | 0.560373 | 1_4:+69762615 | Msa0181520:CDS |
| TTCTGTTACGATGAAATTCG+CGG | 0.563354 | 1_4:+69753126 | Msa0181520:exon |
| GGAAGGGAGTGTGTGTGGTG+TGG | 0.563797 | 1_4:-69752564 | None:intergenic |
| GAGAGGGAAGGGAGTGTGTG+TGG | 0.564839 | 1_4:-69752569 | None:intergenic |
| CCTCTGTCCAAGTGATATGC+CGG | 0.565043 | 1_4:-69753363 | None:intergenic |
| ATCTAATCACAGTGGAGGCA+TGG | 0.566431 | 1_4:+69753167 | Msa0181520:CDS |
| GGTCATTTGGAAGATCAGAC+TGG | 0.567993 | 1_4:+69762576 | Msa0181520:intron |
| TTGAGAGAATTGGAAACAAG+TGG | 0.568513 | 1_4:+69753079 | Msa0181520:five_prime_UTR |
| CCGGCATATCACTTGGACAG+AGG | 0.569054 | 1_4:+69753363 | Msa0181520:CDS |
| CCCTGAAGTAAAAGGATAGA+GGG | 0.570039 | 1_4:+69762639 | Msa0181520:three_prime_UTR |
| TTACGACAAGTTGTATCGCA+TGG | 0.575143 | 1_4:-69762421 | None:intergenic |
| GGAGAGAGCGCAAACCCGCA+GGG | 0.576040 | 1_4:+69756949 | Msa0181520:CDS |
| AAGCCTCGATTTCAATTACG+TGG | 0.580072 | 1_4:+69752906 | Msa0181520:five_prime_UTR |
| CGGTGTCGTATTGAGAAGGA+AGG | 0.580486 | 1_4:-69752649 | None:intergenic |
| ACCAAATATGAGAACTTCAA+GGG | 0.586887 | 1_4:+69756989 | Msa0181520:CDS |
| AGGTTTAGGAAAGGCACGCA+AGG | 0.588900 | 1_4:+69760015 | Msa0181520:CDS |
| TATTCTATAATCTTAGGAGA+TGG | 0.595192 | 1_4:+69762873 | Msa0181520:three_prime_UTR |
| GTACTTGCCAGGGAGGTGGT+TGG | 0.599266 | 1_4:+69756903 | Msa0181520:intron |
| CAGACTATTGCAGAAGCAGT+CGG | 0.602204 | 1_4:+69762349 | Msa0181520:intron |
| TGCGCGGTGTCGTATTGAGA+AGG | 0.606929 | 1_4:-69752653 | None:intergenic |
| TGAGATCAGAAATAGGCTGT+AGG | 0.610940 | 1_4:-69763098 | None:intergenic |
| AAACAGAGTGTTTAATAATG+GGG | 0.626272 | 1_4:+69759292 | Msa0181520:CDS |
| AATCCACGTAATTGAAATCG+AGG | 0.627604 | 1_4:-69752909 | None:intergenic |
| TCTGCCAAAAGGTTTAGGAA+AGG | 0.633220 | 1_4:+69760006 | Msa0181520:CDS |
| AGTAGAACATATTCTTAGTG+AGG | 0.635715 | 1_4:+69763043 | Msa0181520:three_prime_UTR |
| GTTGTATCTAATCACAGTGG+AGG | 0.638321 | 1_4:+69753162 | Msa0181520:CDS |
| GAAGTTGTCACAGTGGTGAA+AGG | 0.641338 | 1_4:-69760178 | None:intergenic |
| GAAGAAATGGTAAATCACAA+TGG | 0.649286 | 1_4:-69752961 | None:intergenic |
| GAGAGAGCGCAAACCCGCAG+GGG | 0.664105 | 1_4:+69756950 | Msa0181520:CDS |
| GGCTGTAGGCATCTACGTCG+AGG | 0.666737 | 1_4:-69763084 | None:intergenic |
| GTGATGAAAATCAGACAACA+AGG | 0.673926 | 1_4:+69759936 | Msa0181520:intron |
| GTCTGGATAAGACATCGCGT+TGG | 0.686083 | 1_4:-69761262 | None:intergenic |
| GTGAAGCTGAGATACTGTGA+TGG | 0.689447 | 1_4:+69759254 | Msa0181520:CDS |
| AAGGAGTGTAGTGTAGTGCG+CGG | 0.696531 | 1_4:-69752669 | None:intergenic |
| GTTGTCACAGTGGTGAAAGG+TGG | 0.697162 | 1_4:-69760175 | None:intergenic |
| GGTGTCGTATTGAGAAGGAA+GGG | 0.704412 | 1_4:-69752648 | None:intergenic |
| TGTTACGATGAAATTCGCGG+TGG | 0.719294 | 1_4:+69753129 | Msa0181520:exon |
| GTGCTACATTCTGATTACCG+CGG | 0.727094 | 1_4:-69763004 | None:intergenic |
| ATTGTTGTATCTAATCACAG+TGG | 0.781002 | 1_4:+69753159 | Msa0181520:CDS |
| ACTTGGTGAAGTTGTCACAG+TGG | 0.810181 | 1_4:-69760185 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTGAATGAATATAT+TGG | - | chr1_4:69752626-69752645 | None:intergenic | 10.0% |
| !! | ATTAATTTCATTGAAATTAT+TGG | + | chr1_4:69753272-69753291 | Msa0181520:intron | 10.0% |
| !!! | AAAGAAAGTTTTTTTTTTTA+AGG | + | chr1_4:69753792-69753811 | Msa0181520:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr1_4:69753968-69753987 | Msa0181520:intron | 10.0% |
| !!! | ATATTATGAAAATTCTTTTA+AGG | - | chr1_4:69754786-69754805 | None:intergenic | 10.0% |
| !! | TCATAATATTAGTAATTATT+TGG | + | chr1_4:69755056-69755075 | Msa0181520:intron | 10.0% |
| !! | TCATAATATTATTAACTATT+TGG | + | chr1_4:69755136-69755155 | Msa0181520:intron | 10.0% |
| !! | TAATTATATGTCAAAATTAA+TGG | + | chr1_4:69755192-69755211 | Msa0181520:intron | 10.0% |
| !!! | GTTAATTTTTTAAAAACATA+TGG | - | chr1_4:69755407-69755426 | None:intergenic | 10.0% |
| !!! | CTTTTTTTTTTTAATAGAAA+AGG | - | chr1_4:69755604-69755623 | None:intergenic | 10.0% |
| !!! | ACCTTTTTATTATTTTTTAA+GGG | + | chr1_4:69755828-69755847 | Msa0181520:intron | 10.0% |
| !! | TAGTTGAATTTAAATATTTA+AGG | + | chr1_4:69756561-69756580 | Msa0181520:intron | 10.0% |
| !! | TAAATATTTAAGGATTAAAT+CGG | + | chr1_4:69756571-69756590 | Msa0181520:intron | 10.0% |
| !! | ATCAATAAAATATTTAGTTA+AGG | - | chr1_4:69757138-69757157 | None:intergenic | 10.0% |
| !! | ATAAATAAACAATACTATAT+GGG | - | chr1_4:69757240-69757259 | None:intergenic | 10.0% |
| !! | AATAAATAAACAATACTATA+TGG | - | chr1_4:69757241-69757260 | None:intergenic | 10.0% |
| !! | ATTAAAATTTGAATTGAAAT+TGG | + | chr1_4:69758236-69758255 | Msa0181520:intron | 10.0% |
| !! | AAAATATTAGATTACAAATA+AGG | - | chr1_4:69758646-69758665 | None:intergenic | 10.0% |
| !!! | TTATTTGTAATCTAATATTT+TGG | + | chr1_4:69758645-69758664 | Msa0181520:intron | 10.0% |
| !!! | TATTTGTAATCTAATATTTT+GGG | + | chr1_4:69758646-69758665 | Msa0181520:intron | 10.0% |
| !! | TTAATTATCAATATAATACT+GGG | - | chr1_4:69758762-69758781 | None:intergenic | 10.0% |
| !!! | TATTTTAAATTTATGTACAA+AGG | + | chr1_4:69759383-69759402 | Msa0181520:intron | 10.0% |
| !! | ATTTGAAAAAATTCAATATA+GGG | - | chr1_4:69761142-69761161 | None:intergenic | 10.0% |
| !! | AATTTGAAAAAATTCAATAT+AGG | - | chr1_4:69761143-69761162 | None:intergenic | 10.0% |
| !! | TTAAAAGAATATTGAAGAAA+TGG | - | chr1_4:69752977-69752996 | None:intergenic | 15.0% |
| !!! | TTATTTATTGAAATTTTGAG+TGG | + | chr1_4:69753307-69753326 | Msa0181520:intron | 15.0% |
| !!! | TAAATTTTCATATGAATAAC+TGG | + | chr1_4:69753624-69753643 | Msa0181520:intron | 15.0% |
| !!! | AAAGTTTTTTTTTTTAAGGA+AGG | + | chr1_4:69753796-69753815 | Msa0181520:intron | 15.0% |
| !! | CTTAAATAAAAGAGAATATT+TGG | - | chr1_4:69753897-69753916 | None:intergenic | 15.0% |
| !! | AGTATTAATTAGAGTTATAA+AGG | + | chr1_4:69754069-69754088 | Msa0181520:intron | 15.0% |
| !! | GTATTAATTAGAGTTATAAA+GGG | + | chr1_4:69754070-69754089 | Msa0181520:intron | 15.0% |
| !! | TATTAATTAGAGTTATAAAG+GGG | + | chr1_4:69754071-69754090 | Msa0181520:intron | 15.0% |
| !!! | ACATTTTTTTCTATATTCAT+AGG | - | chr1_4:69754656-69754675 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTCTATATTCAT+AGG | - | chr1_4:69754877-69754896 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAGAGATTCAAA+AGG | + | chr1_4:69754961-69754980 | Msa0181520:intron | 15.0% |
| !! | AAAAAAAAAGAGATTCAAAA+GGG | + | chr1_4:69754962-69754981 | Msa0181520:intron | 15.0% |
| !! | TAGTAATTATTTGGTAAAAA+AGG | + | chr1_4:69755065-69755084 | Msa0181520:intron | 15.0% |
| !! | TCACAATATTATTAATTATC+TGG | + | chr1_4:69755097-69755116 | Msa0181520:intron | 15.0% |
| !! | TATTAATTATCTGGTAAAAA+AGG | + | chr1_4:69755106-69755125 | Msa0181520:intron | 15.0% |
| !! | TAACTATTTGGTAAAAAAAA+TGG | + | chr1_4:69755148-69755167 | Msa0181520:intron | 15.0% |
| !!! | ATTAAATCTTATGTTTTTCA+AGG | + | chr1_4:69755373-69755392 | Msa0181520:intron | 15.0% |
| !!! | TTAAATCTTATGTTTTTCAA+GGG | + | chr1_4:69755374-69755393 | Msa0181520:intron | 15.0% |
| !!! | TTGTATGTTGATTTTATTTT+TGG | - | chr1_4:69755528-69755547 | None:intergenic | 15.0% |
| !!! | CACCTTTTTATTATTTTTTA+AGG | + | chr1_4:69755827-69755846 | Msa0181520:intron | 15.0% |
| !! | TCCCTTAAAAAATAATAAAA+AGG | - | chr1_4:69755832-69755851 | None:intergenic | 15.0% |
| !! | ACGTACTATTATTAAAAAAT+GGG | - | chr1_4:69756033-69756052 | None:intergenic | 15.0% |
| !! | TACGTACTATTATTAAAAAA+TGG | - | chr1_4:69756034-69756053 | None:intergenic | 15.0% |
| !! | TGTCTTAAATAAATAGTTAT+TGG | - | chr1_4:69756114-69756133 | None:intergenic | 15.0% |
| !!! | TTTATTTAAGACACTATTAT+AGG | + | chr1_4:69756121-69756140 | Msa0181520:intron | 15.0% |
| !!! | TTATTTAAGACACTATTATA+GGG | + | chr1_4:69756122-69756141 | Msa0181520:intron | 15.0% |
| !!! | TGTATATGTAATGTTTTTTT+AGG | + | chr1_4:69756449-69756468 | Msa0181520:intron | 15.0% |
| !!! | CATTCTATATATCTATTTTT+TGG | - | chr1_4:69757169-69757188 | None:intergenic | 15.0% |
| !!! | TCTTTTGATTTTAAATTGAA+CGG | + | chr1_4:69757575-69757594 | Msa0181520:intron | 15.0% |
| !!! | CTACTATTATATTTTTCTTT+TGG | - | chr1_4:69757968-69757987 | None:intergenic | 15.0% |
| !! | TCCAATATAAAAATTTAAGA+TGG | - | chr1_4:69758022-69758041 | None:intergenic | 15.0% |
| !! | AACTTGATTTATATAATCAA+GGG | - | chr1_4:69758300-69758319 | None:intergenic | 15.0% |
| !! | AAGACAAAAGTAATAATATA+AGG | - | chr1_4:69758511-69758530 | None:intergenic | 15.0% |
| !!! | ATTTGTAATCTAATATTTTG+GGG | + | chr1_4:69758647-69758666 | Msa0181520:intron | 15.0% |
| !! | GTTAATTATCAATATAATAC+TGG | - | chr1_4:69758763-69758782 | None:intergenic | 15.0% |
| !! | TCATCATTGTTAATTAAAAA+AGG | - | chr1_4:69758901-69758920 | None:intergenic | 15.0% |
| !!! | AGAACTACAATATTTTTTTA+AGG | - | chr1_4:69762499-69762518 | None:intergenic | 15.0% |
| !! | TATATTGGAAGAAGAAAAAT+TGG | - | chr1_4:69752611-69752630 | None:intergenic | 20.0% |
| !!! | GTGTAAATTTATAGTTTGTT+TGG | + | chr1_4:69753329-69753348 | Msa0181520:intron | 20.0% |
| !!! | AAATTTATAGTTTGTTTGGA+TGG | + | chr1_4:69753333-69753352 | Msa0181520:intron | 20.0% |
| !!! | AATTTATAGTTTGTTTGGAT+GGG | + | chr1_4:69753334-69753353 | Msa0181520:intron | 20.0% |
| !! | TGATATATTAATGTCTTTGA+AGG | + | chr1_4:69753496-69753515 | Msa0181520:intron | 20.0% |
| !! | AGAAAATGACTCAATTAATT+CGG | - | chr1_4:69753934-69753953 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | + | chr1_4:69754034-69754053 | Msa0181520:intron | 20.0% |
| !! | TATAAATGACTCAGATATTA+AGG | + | chr1_4:69754155-69754174 | Msa0181520:intron | 20.0% |
| !! | ATAAATGACTCAGATATTAA+GGG | + | chr1_4:69754156-69754175 | Msa0181520:intron | 20.0% |
| !! | TAAACAAAAATTTCATGTCA+AGG | - | chr1_4:69754522-69754541 | None:intergenic | 20.0% |
| !! | AATTGTTAAGAGATTCTAAA+GGG | + | chr1_4:69754704-69754723 | Msa0181520:intron | 20.0% |
| !! | TTAGACTAAAATCATTGTTA+AGG | + | chr1_4:69754738-69754757 | Msa0181520:intron | 20.0% |
| !! | TAAATTTGATACGTTTCAAA+GGG | + | chr1_4:69754810-69754829 | Msa0181520:intron | 20.0% |
| !!! | CTCTTAACAATTCTTTTTTT+TGG | - | chr1_4:69754921-69754940 | None:intergenic | 20.0% |
| !! | AATTGTTAAGAGATTCTAAA+GGG | + | chr1_4:69754704-69754723 | Msa0181520:intron | 20.0% |
| !! | AATTGAATGCACAAAATTTA+AGG | + | chr1_4:69755950-69755969 | Msa0181520:intron | 20.0% |
| !!! | CATTTAGACATTTTATTAGA+GGG | - | chr1_4:69756084-69756103 | None:intergenic | 20.0% |
| !!! | TCATTTAGACATTTTATTAG+AGG | - | chr1_4:69756085-69756104 | None:intergenic | 20.0% |
| !!! | TATTTAAGACACTATTATAG+GGG | + | chr1_4:69756123-69756142 | Msa0181520:intron | 20.0% |
| !!! | TATTTTATTTAAAAGTGGTG+TGG | + | chr1_4:69756182-69756201 | Msa0181520:intron | 20.0% |
| !!! | ATTTTATTTAAAAGTGGTGT+GGG | + | chr1_4:69756183-69756202 | Msa0181520:intron | 20.0% |
| !! | GTTATTGTTGAACTATATAT+AGG | + | chr1_4:69756684-69756703 | Msa0181520:intron | 20.0% |
| !! | TTATGAATGCAAAACTAAAA+GGG | - | chr1_4:69756855-69756874 | None:intergenic | 20.0% |
| !! | TTTATGAATGCAAAACTAAA+AGG | - | chr1_4:69756856-69756875 | None:intergenic | 20.0% |
| !! | TAGACATTATTGTGTAATAT+CGG | - | chr1_4:69757407-69757426 | None:intergenic | 20.0% |
| !!! | CTTTTCTAATTTCTACTAAT+TGG | + | chr1_4:69757456-69757475 | Msa0181520:intron | 20.0% |
| !!! | TAATTGGTAGTAAAATGTAT+TGG | + | chr1_4:69757472-69757491 | Msa0181520:intron | 20.0% |
| !! | TGTAAATTTCTTGATGTTAT+GGG | + | chr1_4:69757863-69757882 | Msa0181520:intron | 20.0% |
| !!! | GCCATCTTAAATTTTTATAT+TGG | + | chr1_4:69758018-69758037 | Msa0181520:intron | 20.0% |
| !! | TTGGATCTAAATTATTAAAC+CGG | + | chr1_4:69758037-69758056 | Msa0181520:intron | 20.0% |
| !!! | AATTATTAAACCGGTTTATA+AGG | + | chr1_4:69758046-69758065 | Msa0181520:intron | 20.0% |
| !! | GAACTTGATTTATATAATCA+AGG | - | chr1_4:69758301-69758320 | None:intergenic | 20.0% |
| !! | GTAAAAGAAATAAGGAAATA+AGG | - | chr1_4:69758602-69758621 | None:intergenic | 20.0% |
| !!! | TTTTAGCTGTAAAAGAAATA+AGG | - | chr1_4:69758610-69758629 | None:intergenic | 20.0% |
| !!! | TTTGTAATCTAATATTTTGG+GGG | + | chr1_4:69758648-69758667 | Msa0181520:intron | 20.0% |
| !! | ATATATATGATCAGTTCTAT+AGG | - | chr1_4:69758856-69758875 | None:intergenic | 20.0% |
| !! | AAAAGGTAACAATTGATATT+AGG | - | chr1_4:69758884-69758903 | None:intergenic | 20.0% |
| !!! | AGTATTAATTTGAGTTTAGA+GGG | - | chr1_4:69758993-69759012 | None:intergenic | 20.0% |
| !!! | AAGTATTAATTTGAGTTTAG+AGG | - | chr1_4:69758994-69759013 | None:intergenic | 20.0% |
| !! | TAACATTAAAATGAATCACA+AGG | + | chr1_4:69759412-69759431 | Msa0181520:intron | 20.0% |
| !!! | ATTGATATCGATTTAAACAA+CGG | + | chr1_4:69759623-69759642 | Msa0181520:intron | 20.0% |
| !! | TTATAATTATTGATCCTTGA+TGG | + | chr1_4:69759835-69759854 | Msa0181520:intron | 20.0% |
| !! | AACACAAGTATGTATATAAA+TGG | - | chr1_4:69760448-69760467 | None:intergenic | 20.0% |
| !!! | TTATATACATACTTGTGTTT+TGG | + | chr1_4:69760449-69760468 | Msa0181520:intron | 20.0% |
| !!! | AATGATTTTGATACAAGATT+TGG | + | chr1_4:69760691-69760710 | Msa0181520:intron | 20.0% |
| !!! | TTTACTGATTATTTTTCTTC+TGG | - | chr1_4:69760868-69760887 | None:intergenic | 20.0% |
| !! | GAAATAACACAAATGATATA+AGG | + | chr1_4:69760893-69760912 | Msa0181520:intron | 20.0% |
| !! | ATATCTTATGAAATAGAGAA+AGG | + | chr1_4:69761101-69761120 | Msa0181520:intron | 20.0% |
| !! | ATATATTTCAACACATATTG+TGG | - | chr1_4:69761375-69761394 | None:intergenic | 20.0% |
| !! | CATTATATTAAACTCATAGT+TGG | + | chr1_4:69761487-69761506 | Msa0181520:intron | 20.0% |
| !!! | ATGAAATTTGAACTTGTTTA+TGG | - | chr1_4:69761793-69761812 | None:intergenic | 20.0% |
| !! | AAAAAATATTGTAGTTCTCT+TGG | + | chr1_4:69762501-69762520 | Msa0181520:intron | 20.0% |
| !! | AGATAGAAAATTCTTGATAA+AGG | + | chr1_4:69762715-69762734 | Msa0181520:three_prime_UTR | 20.0% |
| !! | ACATGTTATTCTATAATCTT+AGG | + | chr1_4:69762867-69762886 | Msa0181520:three_prime_UTR | 20.0% |
| !! | AGAATATGTTCTACTATTTA+TGG | - | chr1_4:69763038-69763057 | None:intergenic | 20.0% |
| !!! | TATTTTATGAGATCAGAAAT+AGG | - | chr1_4:69763108-69763127 | None:intergenic | 20.0% |
| !! | TGTTTGTAGAAAGCTTTATA+AGG | - | chr1_4:69752691-69752710 | None:intergenic | 25.0% |
| !!! | AGGTTGATAGAATAGAAATA+TGG | - | chr1_4:69752771-69752790 | None:intergenic | 25.0% |
| ! | ACGATTAGTGATGATAAAAA+TGG | - | chr1_4:69752829-69752848 | None:intergenic | 25.0% |
| !! | AATGTCTTTGAAGGATATTA+TGG | + | chr1_4:69753505-69753524 | Msa0181520:intron | 25.0% |
| !!! | AACGTTTTTTCTTGATTACT+GGG | + | chr1_4:69753542-69753561 | Msa0181520:intron | 25.0% |
| ! | GAAAATGACTCAATTAATTC+GGG | - | chr1_4:69753933-69753952 | None:intergenic | 25.0% |
| !! | TAAGTGCTTTTGTTAAGTAT+TGG | + | chr1_4:69754008-69754027 | Msa0181520:intron | 25.0% |
| ! | CAAAGTGGAATATATTGAAT+TGG | + | chr1_4:69754033-69754052 | Msa0181520:intron | 25.0% |
| !! | AAAAGTGAAAGTGTACAAAA+TGG | + | chr1_4:69754221-69754240 | Msa0181520:intron | 25.0% |
| ! | ATGCCACAATTAAAAATGAA+GGG | - | chr1_4:69754496-69754515 | None:intergenic | 25.0% |
| ! | AATGCCACAATTAAAAATGA+AGG | - | chr1_4:69754497-69754516 | None:intergenic | 25.0% |
| ! | AAATATTAATCCAACAGTAG+AGG | + | chr1_4:69754559-69754578 | Msa0181520:intron | 25.0% |
| ! | TAAATTTGACACGTTTCAAA+TGG | + | chr1_4:69754609-69754628 | Msa0181520:intron | 25.0% |
| ! | TCAAATGGAATTAACTTTGA+TGG | + | chr1_4:69754624-69754643 | Msa0181520:intron | 25.0% |
| ! | GAATTGTTAAGAGATTCTAA+AGG | + | chr1_4:69754703-69754722 | Msa0181520:intron | 25.0% |
| ! | CTAAATTTGATACGTTTCAA+AGG | + | chr1_4:69754809-69754828 | Msa0181520:intron | 25.0% |
| ! | GAATTGTTAAGAGATTCTAA+AGG | + | chr1_4:69754703-69754722 | Msa0181520:intron | 25.0% |
| ! | ATTTAATCCACAATAACGTA+TGG | - | chr1_4:69755297-69755316 | None:intergenic | 25.0% |
| ! | AAATCAAAACCAGCATTAAT+TGG | + | chr1_4:69755571-69755590 | Msa0181520:intron | 25.0% |
| ! | TAGTTACTCAACTATTTCAA+TGG | + | chr1_4:69756055-69756074 | Msa0181520:intron | 25.0% |
| ! | AATGTGGGAAAAAAAATATG+GGG | - | chr1_4:69756256-69756275 | None:intergenic | 25.0% |
| ! | CAATGTGGGAAAAAAAATAT+GGG | - | chr1_4:69756257-69756276 | None:intergenic | 25.0% |
| !!! | CATATTTTTTTTCCCACATT+GGG | + | chr1_4:69756256-69756275 | Msa0181520:intron | 25.0% |
| !! | TTTAAGATCTAGTACCTAAT+GGG | - | chr1_4:69756286-69756305 | None:intergenic | 25.0% |
| !! | ATTTAAGATCTAGTACCTAA+TGG | - | chr1_4:69756287-69756306 | None:intergenic | 25.0% |
| ! | ATTAGGTACTAGATCTTAAA+TGG | + | chr1_4:69756286-69756305 | Msa0181520:intron | 25.0% |
| ! | ATACAACAAAGATACATAGT+CGG | - | chr1_4:69756434-69756453 | None:intergenic | 25.0% |
| ! | AAATGTGAAAATGTACTTGT+AGG | + | chr1_4:69756474-69756493 | Msa0181520:intron | 25.0% |
| ! | TGAACTATATATAGGTATGT+CGG | + | chr1_4:69756692-69756711 | Msa0181520:intron | 25.0% |
| ! | AATTTCTTCAGTTGAGATTT+GGG | - | chr1_4:69756831-69756850 | None:intergenic | 25.0% |
| ! | TAATTTCTTCAGTTGAGATT+TGG | - | chr1_4:69756832-69756851 | None:intergenic | 25.0% |
| ! | AATGATCAACACCATATTTA+TGG | + | chr1_4:69756881-69756900 | Msa0181520:intron | 25.0% |
| !!! | TATTGATTTACCTGGATTAA+CGG | - | chr1_4:69757035-69757054 | None:intergenic | 25.0% |
| ! | AATGGATCATAAAGATAACT+TGG | - | chr1_4:69757369-69757388 | None:intergenic | 25.0% |
| ! | AGTTATCTTTATGATCCATT+TGG | + | chr1_4:69757369-69757388 | Msa0181520:intron | 25.0% |
| !! | AAAATGTATTGGTAGGTATT+TGG | + | chr1_4:69757483-69757502 | Msa0181520:intron | 25.0% |
| !! | AAATGTATTGGTAGGTATTT+GGG | + | chr1_4:69757484-69757503 | Msa0181520:intron | 25.0% |
| ! | AGTTAGGTGAAAAAAACAAA+AGG | - | chr1_4:69757712-69757731 | None:intergenic | 25.0% |
| ! | AGAAGTGAAAATTGAAAGTT+AGG | - | chr1_4:69757728-69757747 | None:intergenic | 25.0% |
| ! | TAAGAATTATGAAACGAGAA+TGG | - | chr1_4:69757839-69757858 | None:intergenic | 25.0% |
| ! | CTGTAAATTTCTTGATGTTA+TGG | + | chr1_4:69757862-69757881 | Msa0181520:intron | 25.0% |
| !! | TCTTGATAATTTGTGTCATA+AGG | + | chr1_4:69758373-69758392 | Msa0181520:intron | 25.0% |
| ! | AATATAATACTGGGCAAATA+CGG | - | chr1_4:69758753-69758772 | None:intergenic | 25.0% |
| ! | CAAATAGACAAACTTATCAA+TGG | - | chr1_4:69758813-69758832 | None:intergenic | 25.0% |
| ! | AATGATGATTTCCTATTAAG+CGG | + | chr1_4:69758913-69758932 | Msa0181520:intron | 25.0% |
| !! | GAAACAGAGTGTTTAATAAT+GGG | + | chr1_4:69759291-69759310 | Msa0181520:CDS | 25.0% |
| !! | AAACAGAGTGTTTAATAATG+GGG | + | chr1_4:69759292-69759311 | Msa0181520:CDS | 25.0% |
| ! | AAATGAATCACAAGGATATT+TGG | + | chr1_4:69759420-69759439 | Msa0181520:intron | 25.0% |
| ! | AATGAATCACAAGGATATTT+GGG | + | chr1_4:69759421-69759440 | Msa0181520:intron | 25.0% |
| !! | ATTTGGGTTAATTATCTTCA+TGG | + | chr1_4:69759437-69759456 | Msa0181520:intron | 25.0% |
| !!! | CTTTAACGTTTTTCAAAGAT+AGG | + | chr1_4:69759468-69759487 | Msa0181520:intron | 25.0% |
| !! | TTTTAAATATTAGTCCACGA+TGG | - | chr1_4:69759525-69759544 | None:intergenic | 25.0% |
| !!! | ACTTTTGAAAAAGTATCTCA+TGG | - | chr1_4:69760392-69760411 | None:intergenic | 25.0% |
| ! | GTAATAAGAAATCCTAATAG+AGG | - | chr1_4:69760922-69760941 | None:intergenic | 25.0% |
| ! | ATTTACACAATACACATCAT+TGG | - | chr1_4:69760997-69761016 | None:intergenic | 25.0% |
| ! | ATGATGTGTATTGTGTAAAT+AGG | + | chr1_4:69760997-69761016 | Msa0181520:intron | 25.0% |
| !! | ACTATGCTTTTCATTTCATT+GGG | - | chr1_4:69761024-69761043 | None:intergenic | 25.0% |
| ! | TATTACTTGGAATACATCAT+AGG | - | chr1_4:69761427-69761446 | None:intergenic | 25.0% |
| ! | TCAACAGTTCCATAATATAT+TGG | + | chr1_4:69761539-69761558 | Msa0181520:intron | 25.0% |
| ! | ACCTTGCAATGTATTAATTT+CGG | - | chr1_4:69761634-69761653 | None:intergenic | 25.0% |
| ! | ATCAATAAATGTGAGATTGA+TGG | - | chr1_4:69761675-69761694 | None:intergenic | 25.0% |
| ! | CTGTTTGAATAAAAGTAGAA+GGG | - | chr1_4:69761900-69761919 | None:intergenic | 25.0% |
| !!! | TTCTACTTTTATTCAAACAG+CGG | + | chr1_4:69761900-69761919 | Msa0181520:intron | 25.0% |
| ! | TTCTCCAAGAATAAAAAACA+CGG | + | chr1_4:69761992-69762011 | Msa0181520:intron | 25.0% |
| !! | TGAGATTCTAACTAATTTGT+TGG | + | chr1_4:69762065-69762084 | Msa0181520:intron | 25.0% |
| ! | GATATGTGTATAATTGGAAA+AGG | + | chr1_4:69762145-69762164 | Msa0181520:intron | 25.0% |
| ! | GGTATTAAATTATGTAATGC+AGG | - | chr1_4:69762460-69762479 | None:intergenic | 25.0% |
| ! | TAATTTAATACCTTAAGCTC+AGG | + | chr1_4:69762468-69762487 | Msa0181520:intron | 25.0% |
| !! | TTTACTTGATAGCAATCAAT+CGG | + | chr1_4:69762808-69762827 | Msa0181520:three_prime_UTR | 25.0% |
| ! | TATTCTATAATCTTAGGAGA+TGG | + | chr1_4:69762873-69762892 | Msa0181520:three_prime_UTR | 25.0% |
| ! | AACTTAAAAATCTAATGCAG+AGG | - | chr1_4:69762981-69763000 | None:intergenic | 25.0% |
| TTGATCCATATTCTGTTTGA+TGG | + | chr1_4:69752531-69752550 | Msa0181520:five_prime_UTR | 30.0% | |
| !! | ATGAGAAAGGAATTTTGAGA+GGG | - | chr1_4:69752588-69752607 | None:intergenic | 30.0% |
| GAAGAAAAATTGGATGAGAA+AGG | - | chr1_4:69752601-69752620 | None:intergenic | 30.0% | |
| !! | TTGATTTGGTCATGAAAAAG+TGG | - | chr1_4:69752884-69752903 | None:intergenic | 30.0% |
| GATTTGGAAAGAAACGTAAA+CGG | - | chr1_4:69752942-69752961 | None:intergenic | 30.0% | |
| ! | ATGGTAAATCACAATGGATT+TGG | - | chr1_4:69752958-69752977 | None:intergenic | 30.0% |
| GAAGAAATGGTAAATCACAA+TGG | - | chr1_4:69752964-69752983 | None:intergenic | 30.0% | |
| ! | CTCTTTTGTATTGAGAGAAT+TGG | + | chr1_4:69753069-69753088 | Msa0181520:five_prime_UTR | 30.0% |
| ATTGTTGTATCTAATCACAG+TGG | + | chr1_4:69753159-69753178 | Msa0181520:CDS | 30.0% | |
| TTAATTGAACTTACAAGCAC+CGG | - | chr1_4:69753257-69753276 | None:intergenic | 30.0% | |
| !!! | GAACGTTTTTTCTTGATTAC+TGG | + | chr1_4:69753541-69753560 | Msa0181520:intron | 30.0% |
| ! | TTTTGTCATTCAAAGCAACA+AGG | - | chr1_4:69753584-69753603 | None:intergenic | 30.0% |
| AGAAAGTTAATCCATTGTGT+TGG | + | chr1_4:69753721-69753740 | Msa0181520:intron | 30.0% | |
| ! | TGGTCTAGTGATATTGTTTT+TGG | + | chr1_4:69753741-69753760 | Msa0181520:intron | 30.0% |
| AAATAAAGGAGAGAGAAAAG+TGG | + | chr1_4:69753982-69754001 | Msa0181520:intron | 30.0% | |
| AATGGTGAGTGAAAAAGTTA+CGG | + | chr1_4:69754239-69754258 | Msa0181520:intron | 30.0% | |
| ! | TTTTGTAGCGTTTGAAAAAG+TGG | + | chr1_4:69754275-69754294 | Msa0181520:intron | 30.0% |
| TTTGTAGCGTTTGAAAAAGT+GGG | + | chr1_4:69754276-69754295 | Msa0181520:intron | 30.0% | |
| GTTAAAGTGTGATGATTGAT+TGG | + | chr1_4:69754325-69754344 | Msa0181520:intron | 30.0% | |
| ATGAACAGTGAATATTGTGA+AGG | - | chr1_4:69754455-69754474 | None:intergenic | 30.0% | |
| !! | TTCCCCTTCATTTTTAATTG+TGG | + | chr1_4:69754490-69754509 | Msa0181520:intron | 30.0% |
| TGCCACAATTAAAAATGAAG+GGG | - | chr1_4:69754495-69754514 | None:intergenic | 30.0% | |
| TCAAATGGAACTAACTTTGA+TGG | + | chr1_4:69754845-69754864 | Msa0181520:intron | 30.0% | |
| ! | AAGAGATTCTAAAGGGAATT+TGG | + | chr1_4:69754711-69754730 | Msa0181520:intron | 30.0% |
| !! | TAGACTAAAAGCATTGTTCA+AGG | + | chr1_4:69754997-69755016 | Msa0181520:intron | 30.0% |
| ATAGTTACCATACGTTATTG+TGG | + | chr1_4:69755287-69755306 | Msa0181520:intron | 30.0% | |
| GGTTATATACCAATTAATGC+TGG | - | chr1_4:69755583-69755602 | None:intergenic | 30.0% | |
| !!! | GTTGTCATTGTGTTTTTTGT+GGG | - | chr1_4:69756150-69756169 | None:intergenic | 30.0% |
| !!! | AGTTGTCATTGTGTTTTTTG+TGG | - | chr1_4:69756151-69756170 | None:intergenic | 30.0% |
| CCAATGTGGGAAAAAAAATA+TGG | - | chr1_4:69756258-69756277 | None:intergenic | 30.0% | |
| !!! | CCATATTTTTTTTCCCACAT+TGG | + | chr1_4:69756255-69756274 | Msa0181520:intron | 30.0% |
| ATTAAACCATCCACATTGTA+GGG | - | chr1_4:69756318-69756337 | None:intergenic | 30.0% | |
| TATTAAACCATCCACATTGT+AGG | - | chr1_4:69756319-69756338 | None:intergenic | 30.0% | |
| AGCTTATCATCAATTTATCG+AGG | - | chr1_4:69756362-69756381 | None:intergenic | 30.0% | |
| TCAATTTCAATGTCTTTGCT+TGG | - | chr1_4:69756749-69756768 | None:intergenic | 30.0% | |
| ! | TGATATCTGAAATGACAAAG+TGG | + | chr1_4:69756766-69756785 | Msa0181520:intron | 30.0% |
| ACCAAATATGAGAACTTCAA+GGG | + | chr1_4:69756989-69757008 | Msa0181520:CDS | 30.0% | |
| AACGTTGAAATTCAAGTGAA+TGG | - | chr1_4:69757115-69757134 | None:intergenic | 30.0% | |
| GTAACTAGAACAATAGGTTA+GGG | - | chr1_4:69757313-69757332 | None:intergenic | 30.0% | |
| !! | TCATAAAGATAACTTGGTGT+TGG | - | chr1_4:69757363-69757382 | None:intergenic | 30.0% |
| ! | TGGTAGTAAAATGTATTGGT+AGG | + | chr1_4:69757476-69757495 | Msa0181520:intron | 30.0% |
| !! | AAAAGAACAGCTGTTTTACA+AGG | - | chr1_4:69757561-69757580 | None:intergenic | 30.0% |
| TAGTTATTGTGGAGATTCAA+TGG | - | chr1_4:69757632-69757651 | None:intergenic | 30.0% | |
| AACATGTAGCTTAGTTATTG+TGG | - | chr1_4:69757643-69757662 | None:intergenic | 30.0% | |
| AAACAAAAGGTAGCAATCAA+GGG | - | chr1_4:69757699-69757718 | None:intergenic | 30.0% | |
| AAAACAAAAGGTAGCAATCA+AGG | - | chr1_4:69757700-69757719 | None:intergenic | 30.0% | |
| ! | TTGATGTTATGGGTTAAGTA+AGG | + | chr1_4:69757873-69757892 | Msa0181520:intron | 30.0% |
| GTAGATCACTCAATAAATCT+TGG | + | chr1_4:69757984-69758003 | Msa0181520:intron | 30.0% | |
| CTAATCATCACCTTATAAAC+CGG | - | chr1_4:69758059-69758078 | None:intergenic | 30.0% | |
| AGTGAAATTCTTGTAACATG+TGG | + | chr1_4:69758181-69758200 | Msa0181520:intron | 30.0% | |
| !!! | AACTATTTTAGTTCGCATGA+TGG | - | chr1_4:69758682-69758701 | None:intergenic | 30.0% |
| ATAGACAAACTTATCAATGG+TGG | - | chr1_4:69758810-69758829 | None:intergenic | 30.0% | |
| CTTATACTTAACCGCTTAAT+AGG | - | chr1_4:69758927-69758946 | None:intergenic | 30.0% | |
| !! | TGAGTTTTAACCCATATGTA+TGG | - | chr1_4:69759088-69759107 | None:intergenic | 30.0% |
| GATAAAACAGCAAACTGAAA+CGG | - | chr1_4:69759152-69759171 | None:intergenic | 30.0% | |
| ! | GGAAACAGAGTGTTTAATAA+TGG | + | chr1_4:69759290-69759309 | Msa0181520:CDS | 30.0% |
| !! | TCATGAGTTCTATTTCTGAA+CGG | + | chr1_4:69759781-69759800 | Msa0181520:intron | 30.0% |
| GTTGCTCTTTATGAAAGTTT+AGG | + | chr1_4:69760050-69760069 | Msa0181520:intron | 30.0% | |
| ! | ACCAACTTTGTATGTTGTTT+AGG | + | chr1_4:69760119-69760138 | Msa0181520:intron | 30.0% |
| GACTCAAAATAGAGAAAAGA+GGG | - | chr1_4:69760289-69760308 | None:intergenic | 30.0% | |
| TGACTCAAAATAGAGAAAAG+AGG | - | chr1_4:69760290-69760309 | None:intergenic | 30.0% | |
| TATAAATGGCGCATTATTGA+AGG | - | chr1_4:69760434-69760453 | None:intergenic | 30.0% | |
| TACATTTATATGCTTCCTGA+AGG | + | chr1_4:69760495-69760514 | Msa0181520:intron | 30.0% | |
| AGATGAAAGCGATTAATAGA+CGG | + | chr1_4:69760544-69760563 | Msa0181520:intron | 30.0% | |
| TCGGTTGTTGAAAGTTATTT+GGG | - | chr1_4:69760784-69760803 | None:intergenic | 30.0% | |
| TTCGGTTGTTGAAAGTTATT+TGG | - | chr1_4:69760785-69760804 | None:intergenic | 30.0% | |
| AGAAGTAGGTTTATGAAACT+TGG | + | chr1_4:69760816-69760835 | Msa0181520:intron | 30.0% | |
| AGGTTTATGAAACTTGGAAT+TGG | + | chr1_4:69760822-69760841 | Msa0181520:intron | 30.0% | |
| TTACAATATTAGTTGCTGAG+TGG | + | chr1_4:69760938-69760957 | Msa0181520:intron | 30.0% | |
| ! | CACTATGCTTTTCATTTCAT+TGG | - | chr1_4:69761025-69761044 | None:intergenic | 30.0% |
| TTCCATAAGAGAAAGAAAAG+TGG | + | chr1_4:69761161-69761180 | Msa0181520:intron | 30.0% | |
| TCCATAAGAGAAAGAAAAGT+GGG | + | chr1_4:69761162-69761181 | Msa0181520:intron | 30.0% | |
| !!! | ATAGTTTTGTCTTGTGTAAC+AGG | + | chr1_4:69761209-69761228 | Msa0181520:intron | 30.0% |
| !!! | TAGTTTTGTCTTGTGTAACA+GGG | + | chr1_4:69761210-69761229 | Msa0181520:intron | 30.0% |
| GCAGAGTTCAAGATAAAAAA+CGG | - | chr1_4:69761405-69761424 | None:intergenic | 30.0% | |
| TGCAATGTATTAATTTCGGT+TGG | - | chr1_4:69761630-69761649 | None:intergenic | 30.0% | |
| ACCGAAATTAATACATTGCA+AGG | + | chr1_4:69761630-69761649 | Msa0181520:intron | 30.0% | |
| TCAGTTTATTCACAGTTAAG+AGG | - | chr1_4:69761816-69761835 | None:intergenic | 30.0% | |
| GAGTAAAGTGCATTGAATTA+AGG | - | chr1_4:69761843-69761862 | None:intergenic | 30.0% | |
| TAATTCAATGCACTTTACTC+AGG | + | chr1_4:69761843-69761862 | Msa0181520:intron | 30.0% | |
| GCTGTTTGAATAAAAGTAGA+AGG | - | chr1_4:69761901-69761920 | None:intergenic | 30.0% | |
| !! | TCTACTTTTATTCAAACAGC+GGG | + | chr1_4:69761901-69761920 | Msa0181520:intron | 30.0% |
| !! | TGTTTTGTTGTCAAAGAGAT+TGG | - | chr1_4:69762020-69762039 | None:intergenic | 30.0% |
| GAATCTCACATACAATAAAC+AGG | - | chr1_4:69762053-69762072 | None:intergenic | 30.0% | |
| TTTGAGTAGTTATCAGAAGT+TGG | - | chr1_4:69762120-69762139 | None:intergenic | 30.0% | |
| ACCTACGATATGTGTATAAT+TGG | + | chr1_4:69762139-69762158 | Msa0181520:intron | 30.0% | |
| TCCAATTATACACATATCGT+AGG | - | chr1_4:69762143-69762162 | None:intergenic | 30.0% | |
| ATAATTGGAAAAGGAATCTG+AGG | + | chr1_4:69762154-69762173 | Msa0181520:intron | 30.0% | |
| CAAAATTTGAGTCTTACACT+TGG | + | chr1_4:69762244-69762263 | Msa0181520:intron | 30.0% | |
| ! | TGAGTTTTTAATCAGCAACA+TGG | + | chr1_4:69762306-69762325 | Msa0181520:intron | 30.0% |
| ! | TTTTAGTAGAAACAGAAGCA+AGG | + | chr1_4:69762381-69762400 | Msa0181520:CDS | 30.0% |
| ! | TTGAAATGTTTCAGGTCATT+TGG | + | chr1_4:69762563-69762582 | Msa0181520:intron | 30.0% |
| TAGGAGATGGTAATTATTCT+TGG | + | chr1_4:69762886-69762905 | Msa0181520:three_prime_UTR | 30.0% | |
| !!! | TAGATTTTTAAGTTATGCCG+CGG | + | chr1_4:69762987-69763006 | Msa0181520:three_prime_UTR | 30.0% |
| AGTAGAACATATTCTTAGTG+AGG | + | chr1_4:69763043-69763062 | Msa0181520:three_prime_UTR | 30.0% | |
| ATCCATATTCTGTTTGATGG+TGG | + | chr1_4:69752534-69752553 | Msa0181520:five_prime_UTR | 35.0% | |
| ! | TCCATATTCTGTTTGATGGT+GGG | + | chr1_4:69752535-69752554 | Msa0181520:five_prime_UTR | 35.0% |
| !! | AAAGGAATTTTGAGAGGGAA+GGG | - | chr1_4:69752583-69752602 | None:intergenic | 35.0% |
| ! | GATGAGAAAGGAATTTTGAG+AGG | - | chr1_4:69752589-69752608 | None:intergenic | 35.0% |
| ! | AAAAGAAAGAGAAGCGTGAA+AGG | - | chr1_4:69752733-69752752 | None:intergenic | 35.0% |
| ! | AAATCGAGGCTTCATTGATT+TGG | - | chr1_4:69752898-69752917 | None:intergenic | 35.0% |
| AATCCACGTAATTGAAATCG+AGG | - | chr1_4:69752912-69752931 | None:intergenic | 35.0% | |
| GAAAGAAACGTAAACGGAAA+TGG | - | chr1_4:69752936-69752955 | None:intergenic | 35.0% | |
| TTGAGAGAATTGGAAACAAG+TGG | + | chr1_4:69753079-69753098 | Msa0181520:five_prime_UTR | 35.0% | |
| TTCTGTTACGATGAAATTCG+CGG | + | chr1_4:69753126-69753145 | Msa0181520:exon | 35.0% | |
| ! | CAATTGGCTTCTACAATTTG+AGG | + | chr1_4:69753404-69753423 | Msa0181520:CDS | 35.0% |
| ATATCACTAGACCAACACAA+TGG | - | chr1_4:69753735-69753754 | None:intergenic | 35.0% | |
| !! | TGTTAAGTATTGGTGCAAAG+TGG | + | chr1_4:69754018-69754037 | Msa0181520:intron | 35.0% |
| ATGACTCAGATATTAAGGGA+CGG | + | chr1_4:69754160-69754179 | Msa0181520:intron | 35.0% | |
| TTGTAGCGTTTGAAAAAGTG+GGG | + | chr1_4:69754277-69754296 | Msa0181520:intron | 35.0% | |
| AAGTGTGATGATTGATTGGT+TGG | + | chr1_4:69754329-69754348 | Msa0181520:intron | 35.0% | |
| ACAGTGAATATTGTGAAGGA+CGG | - | chr1_4:69754451-69754470 | None:intergenic | 35.0% | |
| ATTAATCCAACAGTAGAGGT+TGG | + | chr1_4:69754563-69754582 | Msa0181520:intron | 35.0% | |
| GGGAACTAACTTTGATCAAA+TGG | + | chr1_4:69754830-69754849 | Msa0181520:intron | 35.0% | |
| AACATGTCGCATATGAAGTT+TGG | + | chr1_4:69755651-69755670 | Msa0181520:intron | 35.0% | |
| ! | CATTTAAGACCTCAAAGTTG+AGG | - | chr1_4:69755789-69755808 | None:intergenic | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr1_4:69755852-69755871 | Msa0181520:intron | 35.0% |
| CTTCTAAACTTGTGCCTTAA+GGG | - | chr1_4:69755869-69755888 | None:intergenic | 35.0% | |
| ACTTCTAAACTTGTGCCTTA+AGG | - | chr1_4:69755870-69755889 | None:intergenic | 35.0% | |
| ATTTCTTAACATGTGCCCTA+AGG | + | chr1_4:69755991-69756010 | Msa0181520:intron | 35.0% | |
| TTTCTTAACATGTGCCCTAA+GGG | + | chr1_4:69755992-69756011 | Msa0181520:intron | 35.0% | |
| !! | TTAACACCCCCATTTTTAAG+TGG | - | chr1_4:69756210-69756229 | None:intergenic | 35.0% |
| TTCAATGTCTTTGCTTGGAT+TGG | - | chr1_4:69756744-69756763 | None:intergenic | 35.0% | |
| !! | AGTTATTTCAGTTAGCTCTG+TGG | + | chr1_4:69756803-69756822 | Msa0181520:intron | 35.0% |
| CATATTTATGGTACTTGCCA+GGG | + | chr1_4:69756893-69756912 | Msa0181520:intron | 35.0% | |
| CAATGACTTGAAATCATGCT+TGG | + | chr1_4:69756928-69756947 | Msa0181520:CDS | 35.0% | |
| GACCAAATATGAGAACTTCA+AGG | + | chr1_4:69756988-69757007 | Msa0181520:CDS | 35.0% | |
| ACCCTTGAAGTTCTCATATT+TGG | - | chr1_4:69756993-69757012 | None:intergenic | 35.0% | |
| !! | AGAGCAGATATTGATTTACC+TGG | - | chr1_4:69757043-69757062 | None:intergenic | 35.0% |
| CGTAACTAGAACAATAGGTT+AGG | - | chr1_4:69757314-69757333 | None:intergenic | 35.0% | |
| !! | TGTTGGTGGTTTAGAGTATT+CGG | - | chr1_4:69757340-69757359 | None:intergenic | 35.0% |
| !! | TTACACTTTTGCTGTAGCAA+TGG | + | chr1_4:69757534-69757553 | Msa0181520:intron | 35.0% |
| ATTTCACTATCGCACCATTT+GGG | - | chr1_4:69758169-69758188 | None:intergenic | 35.0% | |
| AATTTCACTATCGCACCATT+TGG | - | chr1_4:69758170-69758189 | None:intergenic | 35.0% | |
| TAAGTTTGTCTATTTGTGCG+TGG | + | chr1_4:69758817-69758836 | Msa0181520:intron | 35.0% | |
| !! | TCCGTTTTAGCCATACATAT+GGG | + | chr1_4:69759075-69759094 | Msa0181520:intron | 35.0% |
| ACCCATATGTATGGCTAAAA+CGG | - | chr1_4:69759079-69759098 | None:intergenic | 35.0% | |
| ! | TTGTACCAGACTTTTACAAC+TGG | + | chr1_4:69759225-69759244 | Msa0181520:intron | 35.0% |
| ! | AGACTTTTACAACTGGAACA+GGG | + | chr1_4:69759232-69759251 | Msa0181520:intron | 35.0% |
| ! | AATATGAGCCACTTTACTCT+AGG | + | chr1_4:69759498-69759517 | Msa0181520:intron | 35.0% |
| ! | CTCTTGGTAGTAGATGTTAA+TGG | + | chr1_4:69759578-69759597 | Msa0181520:intron | 35.0% |
| !! | AGTTCTATTTCTGAACGGTA+TGG | + | chr1_4:69759786-69759805 | Msa0181520:intron | 35.0% |
| GTGATGAAAATCAGACAACA+AGG | + | chr1_4:69759936-69759955 | Msa0181520:intron | 35.0% | |
| ACAACAAGGCTTTACTTCAA+AGG | + | chr1_4:69759950-69759969 | Msa0181520:CDS | 35.0% | |
| CAACAAGGCTTTACTTCAAA+GGG | + | chr1_4:69759951-69759970 | Msa0181520:CDS | 35.0% | |
| GCCTAAACAACATACAAAGT+TGG | - | chr1_4:69760123-69760142 | None:intergenic | 35.0% | |
| !! | CATTTAACACTAGCATTGGT+TGG | - | chr1_4:69760216-69760235 | None:intergenic | 35.0% |
| CAAGCATTTAACACTAGCAT+TGG | - | chr1_4:69760220-69760239 | None:intergenic | 35.0% | |
| !!! | ATGCAGGTTTTTTCCTTGAT+GGG | + | chr1_4:69760244-69760263 | Msa0181520:CDS | 35.0% |
| AGTCTTTAACATACCCATCA+AGG | - | chr1_4:69760260-69760279 | None:intergenic | 35.0% | |
| ACATCTCTTCTGCAAAAAGA+GGG | - | chr1_4:69760355-69760374 | None:intergenic | 35.0% | |
| !! | TGAAAAAGTATCTCATGGTG+TGG | - | chr1_4:69760387-69760406 | None:intergenic | 35.0% |
| ! | CAAAAGTGTAGTTACATTGC+AGG | + | chr1_4:69760405-69760424 | Msa0181520:CDS | 35.0% |
| ! | TACTTCTTCAGTTGTTGGTT+CGG | - | chr1_4:69760803-69760822 | None:intergenic | 35.0% |
| AAACCTACTTCTTCAGTTGT+TGG | - | chr1_4:69760808-69760827 | None:intergenic | 35.0% | |
| TGGCATACAAATCTTCACAA+AGG | - | chr1_4:69760848-69760867 | None:intergenic | 35.0% | |
| GATATAAGGAAGCCTCTATT+AGG | + | chr1_4:69760907-69760926 | Msa0181520:intron | 35.0% | |
| ! | TGAAAAGCATAGTGCTCAAA+TGG | + | chr1_4:69761031-69761050 | Msa0181520:intron | 35.0% |
| TCAATATAGGGAATAGCATG+TGG | - | chr1_4:69761130-69761149 | None:intergenic | 35.0% | |
| !! | ACCCACTTTTCTTTCTCTTA+TGG | - | chr1_4:69761166-69761185 | None:intergenic | 35.0% |
| AAAAGTGGGTAACAGTAAAC+AGG | + | chr1_4:69761176-69761195 | Msa0181520:intron | 35.0% | |
| !! | AGTTTTGTCTTGTGTAACAG+GGG | + | chr1_4:69761211-69761230 | Msa0181520:intron | 35.0% |
| GCATCTCAGAAACTATTACT+TGG | - | chr1_4:69761440-69761459 | None:intergenic | 35.0% | |
| AAGGTGGCACCAATATATTA+TGG | - | chr1_4:69761551-69761570 | None:intergenic | 35.0% | |
| GATGGCAGATAATTGAAAGA+GGG | - | chr1_4:69761657-69761676 | None:intergenic | 35.0% | |
| TGATGGCAGATAATTGAAAG+AGG | - | chr1_4:69761658-69761677 | None:intergenic | 35.0% | |
| ! | ATGCACTTTACTCAGGTTTT+AGG | + | chr1_4:69761850-69761869 | Msa0181520:intron | 35.0% |
| !! | CTACTTTTATTCAAACAGCG+GGG | + | chr1_4:69761902-69761921 | Msa0181520:intron | 35.0% |
| ! | TACTTTTATTCAAACAGCGG+GGG | + | chr1_4:69761903-69761922 | Msa0181520:intron | 35.0% |
| ATGTATCTTGCGATTCACTT+TGG | - | chr1_4:69761959-69761978 | None:intergenic | 35.0% | |
| AAAGTGAATCGCAAGATACA+TGG | + | chr1_4:69761958-69761977 | Msa0181520:intron | 35.0% | |
| !!! | GGTACCGTGTTTTTTATTCT+TGG | - | chr1_4:69761999-69762018 | None:intergenic | 35.0% |
| AAATTATGTAATGCAGGAGC+AGG | - | chr1_4:69762454-69762473 | None:intergenic | 35.0% | |
| TTCAAACTGAGTCAGATCAA+TGG | - | chr1_4:69762548-69762567 | None:intergenic | 35.0% | |
| ! | GACTCAGTTTGAAATGTTTC+AGG | + | chr1_4:69762555-69762574 | Msa0181520:intron | 35.0% |
| ! | TTTTGTCTGGTATCTGAAGA+AGG | + | chr1_4:69762832-69762851 | Msa0181520:three_prime_UTR | 35.0% |
| GAGATGGTAATTATTCTTGG+TGG | + | chr1_4:69762889-69762908 | Msa0181520:three_prime_UTR | 35.0% | |
| ACCCACCATCAAACAGAATA+TGG | - | chr1_4:69752539-69752558 | None:intergenic | 40.0% | |
| !! | GAAAGGAATTTTGAGAGGGA+AGG | - | chr1_4:69752584-69752603 | None:intergenic | 40.0% |
| ! | CACGCTCAATCTAAGGTAAA+AGG | - | chr1_4:69752791-69752810 | None:intergenic | 40.0% |
| TAAAACGCACGCTCAATCTA+AGG | - | chr1_4:69752798-69752817 | None:intergenic | 40.0% | |
| AAGCCTCGATTTCAATTACG+TGG | + | chr1_4:69752906-69752925 | Msa0181520:five_prime_UTR | 40.0% | |
| GTTGTATCTAATCACAGTGG+AGG | + | chr1_4:69753162-69753181 | Msa0181520:CDS | 40.0% | |
| TTGTTTGGATGGGAGTTTAC+CGG | + | chr1_4:69753344-69753363 | Msa0181520:CDS | 40.0% | |
| TATCACTTGGACAGAGGATT+TGG | + | chr1_4:69753369-69753388 | Msa0181520:CDS | 40.0% | |
| TTGGAGCTGGTAAAGACAAT+TGG | + | chr1_4:69753388-69753407 | Msa0181520:CDS | 40.0% | |
| ! | TGAAAAAGTTACGGAGTGTC+AGG | + | chr1_4:69754248-69754267 | Msa0181520:intron | 40.0% |
| ! | GAAAAAGTTACGGAGTGTCA+GGG | + | chr1_4:69754249-69754268 | Msa0181520:intron | 40.0% |
| TGTAGCGTTTGAAAAAGTGG+GGG | + | chr1_4:69754278-69754297 | Msa0181520:intron | 40.0% | |
| !!! | TGGTGTGTATTTTTGGGTTG+TGG | + | chr1_4:69754301-69754320 | Msa0181520:intron | 40.0% |
| !!! | GGTGTGTATTTTTGGGTTGT+GGG | + | chr1_4:69754302-69754321 | Msa0181520:intron | 40.0% |
| !!! | GTGTGTATTTTTGGGTTGTG+GGG | + | chr1_4:69754303-69754322 | Msa0181520:intron | 40.0% |
| AGTGAATATTGTGAAGGACG+GGG | - | chr1_4:69754449-69754468 | None:intergenic | 40.0% | |
| CAGTGAATATTGTGAAGGAC+GGG | - | chr1_4:69754450-69754469 | None:intergenic | 40.0% | |
| TTAGATCCAACCTCTACTGT+TGG | - | chr1_4:69754572-69754591 | None:intergenic | 40.0% | |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | - | chr1_4:69756009-69756028 | None:intergenic | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | - | chr1_4:69756010-69756029 | None:intergenic | 40.0% |
| GTGTGGGTCCACTTAAAAAT+GGG | + | chr1_4:69756199-69756218 | Msa0181520:intron | 40.0% | |
| TGTGGGTCCACTTAAAAATG+GGG | + | chr1_4:69756200-69756219 | Msa0181520:intron | 40.0% | |
| ATGGTAAAGACCCTACAATG+TGG | + | chr1_4:69756305-69756324 | Msa0181520:intron | 40.0% | |
| TAAAGACCCTACAATGTGGA+TGG | + | chr1_4:69756309-69756328 | Msa0181520:intron | 40.0% | |
| CCTGGCAAGTACCATAAATA+TGG | - | chr1_4:69756895-69756914 | None:intergenic | 40.0% | |
| CCATATTTATGGTACTTGCC+AGG | + | chr1_4:69756892-69756911 | Msa0181520:intron | 40.0% | |
| !! | TGTAATTTGTTGAACCCCTG+CGG | - | chr1_4:69756967-69756986 | None:intergenic | 40.0% |
| AACAATGCTACCGTTAATCC+AGG | + | chr1_4:69757022-69757041 | Msa0181520:CDS | 40.0% | |
| !! | AGATAACTTGGTGTTGGTGT+TGG | - | chr1_4:69757357-69757376 | None:intergenic | 40.0% |
| CGGTATCTCATTATGCCAAA+TGG | - | chr1_4:69757387-69757406 | None:intergenic | 40.0% | |
| TGGGCATACATATTTGTCAC+TGG | - | chr1_4:69757602-69757621 | None:intergenic | 40.0% | |
| GAGATTCAATGGACACAGTT+GGG | - | chr1_4:69757621-69757640 | None:intergenic | 40.0% | |
| ! | AACAACAAGAGCACGTGAAA+GGG | - | chr1_4:69757676-69757695 | None:intergenic | 40.0% |
| AAGCACGCAAGATACAAGAT+TGG | - | chr1_4:69757772-69757791 | None:intergenic | 40.0% | |
| GTCACATGTCAAATGGACAA+CGG | - | chr1_4:69757795-69757814 | None:intergenic | 40.0% | |
| ATGTCCAATACTAAGCTGGA+GGG | - | chr1_4:69757926-69757945 | None:intergenic | 40.0% | |
| TCATTGAAAGGGAAAAGGCA+TGG | - | chr1_4:69758102-69758121 | None:intergenic | 40.0% | |
| GAGTCTCATTGAAAGGGAAA+AGG | - | chr1_4:69758107-69758126 | None:intergenic | 40.0% | |
| GTGCTAGAGTCTCATTGAAA+GGG | - | chr1_4:69758113-69758132 | None:intergenic | 40.0% | |
| TCTGAGCTGGACATAATGAT+TGG | - | chr1_4:69758565-69758584 | None:intergenic | 40.0% | |
| ATTATGTCCAGCTCAGATGT+CGG | + | chr1_4:69758568-69758587 | Msa0181520:intron | 40.0% | |
| AAGAAACAAAGCACGAGTCA+CGG | - | chr1_4:69758714-69758733 | None:intergenic | 40.0% | |
| !! | CTCCGTTTTAGCCATACATA+TGG | + | chr1_4:69759074-69759093 | Msa0181520:intron | 40.0% |
| AAGTCTGGTACAACAGTCAA+AGG | - | chr1_4:69759218-69759237 | None:intergenic | 40.0% | |
| CTGTTCCAGTTGTAAAAGTC+TGG | - | chr1_4:69759233-69759252 | None:intergenic | 40.0% | |
| ! | CAGACTTTTACAACTGGAAC+AGG | + | chr1_4:69759231-69759250 | Msa0181520:intron | 40.0% |
| ! | TGTGATGGAGCTTCATTTAC+TGG | + | chr1_4:69759269-69759288 | Msa0181520:CDS | 40.0% |
| ACCTCTTCTTGCTTATGTAG+TGG | + | chr1_4:69759875-69759894 | Msa0181520:intron | 40.0% | |
| ACCACTACATAAGCAAGAAG+AGG | - | chr1_4:69759879-69759898 | None:intergenic | 40.0% | |
| ACTTCAAAGGGCAAAAGATC+TGG | + | chr1_4:69759963-69759982 | Msa0181520:CDS | 40.0% | |
| CTTCAAAGGGCAAAAGATCT+GGG | + | chr1_4:69759964-69759983 | Msa0181520:CDS | 40.0% | |
| ! | TAAACCTTTTGGCAGAAGGT+CGG | - | chr1_4:69760002-69760021 | None:intergenic | 40.0% |
| ! | TTCCTAAACCTTTTGGCAGA+AGG | - | chr1_4:69760006-69760025 | None:intergenic | 40.0% |
| TCTGCCAAAAGGTTTAGGAA+AGG | + | chr1_4:69760006-69760025 | Msa0181520:CDS | 40.0% | |
| GTTGTTTAGGCTTTGCTTTC+AGG | + | chr1_4:69760132-69760151 | Msa0181520:intron | 40.0% | |
| !! | AGCATTGGTTGGCAAATACT+TGG | - | chr1_4:69760205-69760224 | None:intergenic | 40.0% |
| GTTAAATGCTTGAGTGATGC+AGG | + | chr1_4:69760228-69760247 | Msa0181520:CDS | 40.0% | |
| !!! | GATGCAGGTTTTTTCCTTGA+TGG | + | chr1_4:69760243-69760262 | Msa0181520:CDS | 40.0% |
| ! | TGCAAAAAGAGGGTGCAAAA+GGG | - | chr1_4:69760345-69760364 | None:intergenic | 40.0% |
| GACATCTCTTCTGCAAAAAG+AGG | - | chr1_4:69760356-69760375 | None:intergenic | 40.0% | |
| TTCCTGAAGGAGAAATTTCG+AGG | + | chr1_4:69760508-69760527 | Msa0181520:intron | 40.0% | |
| AACCTCGAAATTTCTCCTTC+AGG | - | chr1_4:69760513-69760532 | None:intergenic | 40.0% | |
| GAACCAACAACTGAAGAAGT+AGG | + | chr1_4:69760802-69760821 | Msa0181520:intron | 40.0% | |
| ! | GTTTTGTCTTGTGTAACAGG+GGG | + | chr1_4:69761212-69761231 | Msa0181520:intron | 40.0% |
| ! | CGTTGGTGCAGTTTTTATTC+AGG | - | chr1_4:69761248-69761267 | None:intergenic | 40.0% |
| CAAGTTCATGGAAACATACC+AGG | - | chr1_4:69761287-69761306 | None:intergenic | 40.0% | |
| GAGCTAATGATGCAAGTTCA+TGG | - | chr1_4:69761299-69761318 | None:intergenic | 40.0% | |
| TGAACTTGCATCATTAGCTC+AGG | + | chr1_4:69761299-69761318 | Msa0181520:intron | 40.0% | |
| CAAGTTGTATCGCATGGATA+TGG | - | chr1_4:69762418-69762437 | None:intergenic | 40.0% | |
| TTACGACAAGTTGTATCGCA+TGG | - | chr1_4:69762424-69762443 | None:intergenic | 40.0% | |
| ! | TAAGGCATTACCTGAGCTTA+AGG | - | chr1_4:69762481-69762500 | None:intergenic | 40.0% |
| TCCCTGAAGTAAAAGGATAG+AGG | + | chr1_4:69762638-69762657 | Msa0181520:three_prime_UTR | 40.0% | |
| ! | CCCTCTATCCTTTTACTTCA+GGG | - | chr1_4:69762642-69762661 | None:intergenic | 40.0% |
| CCCTGAAGTAAAAGGATAGA+GGG | + | chr1_4:69762639-69762658 | Msa0181520:three_prime_UTR | 40.0% | |
| ! | ACCCTCTATCCTTTTACTTC+AGG | - | chr1_4:69762643-69762662 | None:intergenic | 40.0% |
| CAGCATCGTGTATACTTGTA+TGG | - | chr1_4:69762686-69762705 | None:intergenic | 40.0% | |
| TATACACGATGCTGAATGCT+AGG | + | chr1_4:69762692-69762711 | Msa0181520:three_prime_UTR | 40.0% | |
| ATCTAATGCAGAGGTTGCTT+TGG | - | chr1_4:69762972-69762991 | None:intergenic | 40.0% | |
| TGAGATCAGAAATAGGCTGT+AGG | - | chr1_4:69763101-69763120 | None:intergenic | 40.0% | |
| ! | GGTGTCGTATTGAGAAGGAA+GGG | - | chr1_4:69752651-69752670 | None:intergenic | 45.0% |
| TGTTACGATGAAATTCGCGG+TGG | + | chr1_4:69753129-69753148 | Msa0181520:exon | 45.0% | |
| ATCTAATCACAGTGGAGGCA+TGG | + | chr1_4:69753167-69753186 | Msa0181520:CDS | 45.0% | |
| GTTAACAACGCACGTGAAAC+CGG | + | chr1_4:69753235-69753254 | Msa0181520:CDS | 45.0% | |
| GAGTTTACCGGCATATCACT+TGG | + | chr1_4:69753356-69753375 | Msa0181520:CDS | 45.0% | |
| ACTCAGATATTAAGGGACGG+AGG | + | chr1_4:69754163-69754182 | Msa0181520:intron | 45.0% | |
| CTCAGATATTAAGGGACGGA+GGG | + | chr1_4:69754164-69754183 | Msa0181520:intron | 45.0% | |
| ! | TGGGGGTGGTGTGTATTTTT+GGG | + | chr1_4:69754295-69754314 | Msa0181520:intron | 45.0% |
| AATATTGTGAAGGACGGGGT+TGG | - | chr1_4:69754445-69754464 | None:intergenic | 45.0% | |
| CCAACGACATGACAACATGT+GGG | - | chr1_4:69755688-69755707 | None:intergenic | 45.0% | |
| ACCAACGACATGACAACATG+TGG | - | chr1_4:69755689-69755708 | None:intergenic | 45.0% | |
| CAAACATCAACCCACACATG+TGG | - | chr1_4:69755737-69755756 | None:intergenic | 45.0% | |
| TCCATTGGAGATGGTCTTCT+CGG | - | chr1_4:69755763-69755782 | None:intergenic | 45.0% | |
| TCAAAGTTGAGGCTCTCCAT+TGG | - | chr1_4:69755778-69755797 | None:intergenic | 45.0% | |
| AATGGAGAGCCTCAACTTTG+AGG | + | chr1_4:69755777-69755796 | Msa0181520:intron | 45.0% | |
| GGTGTGGGTCCACTTAAAAA+TGG | + | chr1_4:69756198-69756217 | Msa0181520:intron | 45.0% | |
| GTGGGTCCACTTAAAAATGG+GGG | + | chr1_4:69756201-69756220 | Msa0181520:intron | 45.0% | |
| ATGGGGTCTCTTAAGACTCA+GGG | - | chr1_4:69756239-69756258 | None:intergenic | 45.0% | |
| TATGGGGTCTCTTAAGACTC+AGG | - | chr1_4:69756240-69756259 | None:intergenic | 45.0% | |
| ! | CTAATGGGTACTCCCAATGT+GGG | - | chr1_4:69756271-69756290 | None:intergenic | 45.0% |
| ATTTATGGTACTTGCCAGGG+AGG | + | chr1_4:69756896-69756915 | Msa0181520:intron | 45.0% | |
| !! | GTAATTTGTTGAACCCCTGC+GGG | - | chr1_4:69756966-69756985 | None:intergenic | 45.0% |
| GGTGGCGTAACTAGAACAAT+AGG | - | chr1_4:69757319-69757338 | None:intergenic | 45.0% | |
| ! | TGGTGGTTTAGAGTATTCGG+TGG | - | chr1_4:69757337-69757356 | None:intergenic | 45.0% |
| !! | TAACTTGGTGTTGGTGTTGG+TGG | - | chr1_4:69757354-69757373 | None:intergenic | 45.0% |
| GGAGATTCAATGGACACAGT+TGG | - | chr1_4:69757622-69757641 | None:intergenic | 45.0% | |
| ! | GAACAACAAGAGCACGTGAA+AGG | - | chr1_4:69757677-69757696 | None:intergenic | 45.0% |
| GTAATGTCTGTCAACTCGCA+CGG | - | chr1_4:69757817-69757836 | None:intergenic | 45.0% | |
| TGTCCAATACTAAGCTGGAG+GGG | - | chr1_4:69757925-69757944 | None:intergenic | 45.0% | |
| CATGTCCAATACTAAGCTGG+AGG | - | chr1_4:69757927-69757946 | None:intergenic | 45.0% | |
| ! | CTCCAGCTTAGTATTGGACA+TGG | + | chr1_4:69757925-69757944 | Msa0181520:intron | 45.0% |
| CTCCATGTCCAATACTAAGC+TGG | - | chr1_4:69757930-69757949 | None:intergenic | 45.0% | |
| GGTGCTAGAGTCTCATTGAA+AGG | - | chr1_4:69758114-69758133 | None:intergenic | 45.0% | |
| GTTTGTCTATTTGTGCGTGG+TGG | + | chr1_4:69758820-69758839 | Msa0181520:intron | 45.0% | |
| GTGAAGCTGAGATACTGTGA+TGG | + | chr1_4:69759254-69759273 | Msa0181520:CDS | 45.0% | |
| ACGATGGACCTAGAGTAAAG+TGG | - | chr1_4:69759509-69759528 | None:intergenic | 45.0% | |
| ACTTTACTCTAGGTCCATCG+TGG | + | chr1_4:69759508-69759527 | Msa0181520:intron | 45.0% | |
| CGACGATAAACTTCGTCTCT+TGG | + | chr1_4:69759562-69759581 | Msa0181520:intron | 45.0% | |
| GACCTTCTGCCAAAAGGTTT+AGG | + | chr1_4:69760001-69760020 | Msa0181520:CDS | 45.0% | |
| ! | CGTGCCTTTCCTAAACCTTT+TGG | - | chr1_4:69760013-69760032 | None:intergenic | 45.0% |
| GAAGTTGTCACAGTGGTGAA+AGG | - | chr1_4:69760181-69760200 | None:intergenic | 45.0% | |
| ! | ACTTGGTGAAGTTGTCACAG+TGG | - | chr1_4:69760188-69760207 | None:intergenic | 45.0% |
| ! | CTGCAAAAAGAGGGTGCAAA+AGG | - | chr1_4:69760346-69760365 | None:intergenic | 45.0% |
| TGCAACTTGCAAGTTGCAAC+TGG | - | chr1_4:69760647-69760666 | None:intergenic | 45.0% | |
| TCATGGAAACATACCAGGTC+TGG | - | chr1_4:69761282-69761301 | None:intergenic | 45.0% | |
| GAATCGCAAGATACATGGTC+TGG | + | chr1_4:69761963-69761982 | Msa0181520:intron | 45.0% | |
| CAGACTATTGCAGAAGCAGT+CGG | + | chr1_4:69762349-69762368 | Msa0181520:intron | 45.0% | |
| GGTCATTTGGAAGATCAGAC+TGG | + | chr1_4:69762576-69762595 | Msa0181520:intron | 45.0% | |
| AGGAGAACTGGAAAGCTTGT+TGG | - | chr1_4:69762610-69762629 | None:intergenic | 45.0% | |
| CTTTCCAGTTCTCCTATCTG+AGG | + | chr1_4:69762615-69762634 | Msa0181520:CDS | 45.0% | |
| TTACTTCAGGGACCTCAGAT+AGG | - | chr1_4:69762630-69762649 | None:intergenic | 45.0% | |
| ! | TCTGAGGTCCCTGAAGTAAA+AGG | + | chr1_4:69762631-69762650 | Msa0181520:exon | 45.0% |
| !! | GCAATCAATCGGCTTTTGTC+TGG | + | chr1_4:69762819-69762838 | Msa0181520:three_prime_UTR | 45.0% |
| GTGCTACATTCTGATTACCG+CGG | - | chr1_4:69763007-69763026 | None:intergenic | 45.0% | |
| !! | TAATTAATTTATTATTGTTA+TGG | + | chr1_4:69752858-69752877 | Msa0181520:five_prime_UTR | 5.0% |
| !!! | ATTATTATTTTATTTAAAAG+TGG | + | chr1_4:69756177-69756196 | Msa0181520:intron | 5.0% |
| !!! | GATAATAAATAATAATTTTT+TGG | - | chr1_4:69756524-69756543 | None:intergenic | 5.0% |
| !!! | ATTTTTCAAATTTAAATTAT+AGG | + | chr1_4:69757193-69757212 | Msa0181520:intron | 5.0% |
| !! | CGGTGTCGTATTGAGAAGGA+AGG | - | chr1_4:69752652-69752671 | None:intergenic | 50.0% |
| ! | AAGGAGTGTAGTGTAGTGCG+CGG | - | chr1_4:69752672-69752691 | None:intergenic | 50.0% |
| CCTCTGTCCAAGTGATATGC+CGG | - | chr1_4:69753366-69753385 | None:intergenic | 50.0% | |
| ! | TTGGACAGAGGATTTGGAGC+TGG | + | chr1_4:69753375-69753394 | Msa0181520:CDS | 50.0% |
| AGCGTTTGAAAAAGTGGGGG+TGG | + | chr1_4:69754281-69754300 | Msa0181520:intron | 50.0% | |
| ! | GTGGGGGTGGTGTGTATTTT+TGG | + | chr1_4:69754294-69754313 | Msa0181520:intron | 50.0% |
| CCCACATGTTGTCATGTCGT+TGG | + | chr1_4:69755685-69755704 | Msa0181520:intron | 50.0% | |
| CATCAACCCACACATGTGGA+AGG | - | chr1_4:69755733-69755752 | None:intergenic | 50.0% | |
| ACCGAGAAGACCATCTCCAA+TGG | + | chr1_4:69755759-69755778 | Msa0181520:intron | 50.0% | |
| TTGAGGCTCTCCATTGGAGA+TGG | - | chr1_4:69755772-69755791 | None:intergenic | 50.0% | |
| ! | CCTAATGGGTACTCCCAATG+TGG | - | chr1_4:69756272-69756291 | None:intergenic | 50.0% |
| !! | CCACATTGGGAGTACCCATT+AGG | + | chr1_4:69756269-69756288 | Msa0181520:intron | 50.0% |
| AGAGCACGTGAAAGGGAATC+TGG | - | chr1_4:69757669-69757688 | None:intergenic | 50.0% | |
| TCGCACGGTCACATGTCAAA+TGG | - | chr1_4:69757802-69757821 | None:intergenic | 50.0% | |
| GTCCAATACTAAGCTGGAGG+GGG | - | chr1_4:69757924-69757943 | None:intergenic | 50.0% | |
| ATGTCTACCGACATCTGAGC+TGG | - | chr1_4:69758578-69758597 | None:intergenic | 50.0% | |
| GCAAGAAGAGGTGAGCTCTT+CGG | - | chr1_4:69759867-69759886 | None:intergenic | 50.0% | |
| ATTGCCGACCTTCTGCCAAA+AGG | + | chr1_4:69759995-69760014 | Msa0181520:CDS | 50.0% | |
| ! | AGGTTTAGGAAAGGCACGCA+AGG | + | chr1_4:69760015-69760034 | Msa0181520:CDS | 50.0% |
| GTTGTCACAGTGGTGAAAGG+TGG | - | chr1_4:69760178-69760197 | None:intergenic | 50.0% | |
| ! | GAGGGTGCAAAAGGGATTGT+TGG | - | chr1_4:69760337-69760356 | None:intergenic | 50.0% |
| GTCTGGATAAGACATCGCGT+TGG | - | chr1_4:69761265-69761284 | None:intergenic | 50.0% | |
| TTGCAGAAGCAGTCGGTGAT+TGG | + | chr1_4:69762356-69762375 | Msa0181520:CDS | 50.0% | |
| GGAGTGTGTGTGGTGTGGAA+TGG | - | chr1_4:69752562-69752581 | None:intergenic | 55.0% | |
| !! | TGCGCGGTGTCGTATTGAGA+AGG | - | chr1_4:69752656-69752675 | None:intergenic | 55.0% |
| CCGGCATATCACTTGGACAG+AGG | + | chr1_4:69753363-69753382 | Msa0181520:CDS | 55.0% | |
| AAAGTCTAGGCGGAGACGAC+AGG | - | chr1_4:69754389-69754408 | None:intergenic | 55.0% | |
| ACGTCCACCTTCCACATGTG+TGG | + | chr1_4:69755723-69755742 | Msa0181520:intron | 55.0% | |
| CGTCCACCTTCCACATGTGT+GGG | + | chr1_4:69755724-69755743 | Msa0181520:intron | 55.0% | |
| CAACCCACACATGTGGAAGG+TGG | - | chr1_4:69755730-69755749 | None:intergenic | 55.0% | |
| TATGGTACTTGCCAGGGAGG+TGG | + | chr1_4:69756899-69756918 | Msa0181520:intron | 55.0% | |
| !! | AAAAGTGCTGCTGCTGCTGC+TGG | - | chr1_4:69757441-69757460 | None:intergenic | 55.0% |
| GCACGTGAAAGGGAATCTGG+AGG | - | chr1_4:69757666-69757685 | None:intergenic | 55.0% | |
| ! | TACTAAGCTGGAGGGGGTGT+TGG | - | chr1_4:69757918-69757937 | None:intergenic | 55.0% |
| CACCCCCTCCAGCTTAGTAT+TGG | + | chr1_4:69757919-69757938 | Msa0181520:intron | 55.0% | |
| GACATGGAGCGTGACTTGAG+TGG | + | chr1_4:69757941-69757960 | Msa0181520:intron | 55.0% | |
| GACATGGAGCGTGACCCAAA+TGG | + | chr1_4:69758152-69758171 | Msa0181520:intron | 55.0% | |
| ! | CTCTTCGGTGTGGTCCATCA+AGG | - | chr1_4:69759852-69759871 | None:intergenic | 55.0% |
| AAGAGGTGAGCTCTTCGGTG+TGG | - | chr1_4:69759862-69759881 | None:intergenic | 55.0% | |
| TGGCAGAAGGTCGGCAATCA+TGG | - | chr1_4:69759993-69760012 | None:intergenic | 55.0% | |
| TTGCTTTCAGGCTGCTCAGC+AGG | + | chr1_4:69760144-69760163 | Msa0181520:CDS | 55.0% | |
| CGCGATGTCTTATCCAGACC+TGG | + | chr1_4:69761266-69761285 | Msa0181520:CDS | 55.0% | |
| GCACTGGATCCACTGCAAGA+AGG | + | chr1_4:69761587-69761606 | Msa0181520:intron | 55.0% | |
| GGGACCTCAGATAGGAGAAC+TGG | - | chr1_4:69762622-69762641 | None:intergenic | 55.0% | |
| !! | GTGAGGCACTGACCTATCTC+AGG | + | chr1_4:69763060-69763079 | Msa0181520:three_prime_UTR | 55.0% |
| CTACGTCGAGGACCTGAGAT+AGG | - | chr1_4:69763075-69763094 | None:intergenic | 55.0% | |
| ! | GGAAGGGAGTGTGTGTGGTG+TGG | - | chr1_4:69752567-69752586 | None:intergenic | 60.0% |
| ! | GAGAGGGAAGGGAGTGTGTG+TGG | - | chr1_4:69752572-69752591 | None:intergenic | 60.0% |
| TGCGCGCGCAAAAGTCTAGG+CGG | - | chr1_4:69754399-69754418 | None:intergenic | 60.0% | |
| CAGTGCGCGCGCAAAAGTCT+AGG | - | chr1_4:69754402-69754421 | None:intergenic | 60.0% | |
| GTACTTGCCAGGGAGGTGGT+TGG | + | chr1_4:69756903-69756922 | Msa0181520:intron | 60.0% | |
| CATTGCACCAACCACCTCCC+TGG | - | chr1_4:69756913-69756932 | None:intergenic | 60.0% | |
| TCTAGCACCCTCTCATGCCC+AGG | + | chr1_4:69758125-69758144 | Msa0181520:intron | 60.0% | |
| CTTTCAGGCTGCTCAGCAGG+AGG | + | chr1_4:69760147-69760166 | Msa0181520:CDS | 60.0% | |
| CCACCTTCAACTGATCCCCG+CGG | + | chr1_4:69761564-69761583 | Msa0181520:intron | 60.0% | |
| CACCTTCAACTGATCCCCGC+GGG | + | chr1_4:69761565-69761584 | Msa0181520:intron | 60.0% | |
| CCACTGCAAGAAGGACCCAG+CGG | + | chr1_4:69761596-69761615 | Msa0181520:intron | 60.0% | |
| GGCTGTAGGCATCTACGTCG+AGG | - | chr1_4:69763087-69763106 | None:intergenic | 60.0% | |
| ! | TGGAGAGAGCGCAAACCCGC+AGG | + | chr1_4:69756948-69756967 | Msa0181520:CDS | 65.0% |
| ! | GGAGAGAGCGCAAACCCGCA+GGG | + | chr1_4:69756949-69756968 | Msa0181520:CDS | 65.0% |
| ! | GAGAGAGCGCAAACCCGCAG+GGG | + | chr1_4:69756950-69756969 | Msa0181520:CDS | 65.0% |
| AGCACCCTCTCATGCCCAGG+AGG | + | chr1_4:69758128-69758147 | Msa0181520:intron | 65.0% | |
| GCACCCTCTCATGCCCAGGA+GGG | + | chr1_4:69758129-69758148 | Msa0181520:intron | 65.0% | |
| CACCCTCTCATGCCCAGGAG+GGG | + | chr1_4:69758130-69758149 | Msa0181520:intron | 65.0% | |
| GTCCCCTCCTGGGCATGAGA+GGG | - | chr1_4:69758135-69758154 | None:intergenic | 65.0% | |
| TGTCCCCTCCTGGGCATGAG+AGG | - | chr1_4:69758136-69758155 | None:intergenic | 65.0% | |
| CTCATGCCCAGGAGGGGACA+TGG | + | chr1_4:69758136-69758155 | Msa0181520:intron | 65.0% | |
| CACGCTCCATGTCCCCTCCT+GGG | - | chr1_4:69758145-69758164 | None:intergenic | 65.0% | |
| TCACGCTCCATGTCCCCTCC+TGG | - | chr1_4:69758146-69758165 | None:intergenic | 65.0% | |
| CCGCGGGGATCAGTTGAAGG+TGG | - | chr1_4:69761567-69761586 | None:intergenic | 65.0% | |
| TGCCCGCGGGGATCAGTTGA+AGG | - | chr1_4:69761570-69761589 | None:intergenic | 65.0% | |
| TGCAGTGGATCCAGTGCCCG+CGG | - | chr1_4:69761584-69761603 | None:intergenic | 65.0% | |
| CCGCTGGGTCCTTCTTGCAG+TGG | - | chr1_4:69761599-69761618 | None:intergenic | 65.0% | |
| ! | CGGTTGGTGTGCATGCCGCT+GGG | - | chr1_4:69761614-69761633 | None:intergenic | 65.0% |
| ! | TCGGTTGGTGTGCATGCCGC+TGG | - | chr1_4:69761615-69761634 | None:intergenic | 65.0% |
| CAACTGATCCCCGCGGGCAC+TGG | + | chr1_4:69761571-69761590 | Msa0181520:intron | 70.0% | |
| CAGTGGATCCAGTGCCCGCG+GGG | - | chr1_4:69761582-69761601 | None:intergenic | 70.0% | |
| GCAGTGGATCCAGTGCCCGC+GGG | - | chr1_4:69761583-69761602 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 69752530 | 69763145 | 69752530 | ID=Msa0181520;Name=Msa0181520 |
| chr1_4 | mRNA | 69752530 | 69763145 | 69752530 | ID=Msa0181520-mRNA-1;Parent=Msa0181520;Name=Msa0181520-mRNA-1;_AED=0.22;_eAED=0.22;_QI=606|0.77|0.9|1|1|1|10|510|298 |
| chr1_4 | exon | 69752530 | 69753262 | 69752530 | ID=Msa0181520-mRNA-1:exon:23212;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69753343 | 69753425 | 69753343 | ID=Msa0181520-mRNA-1:exon:23213;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69756914 | 69757043 | 69756914 | ID=Msa0181520-mRNA-1:exon:23214;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69759234 | 69759313 | 69759234 | ID=Msa0181520-mRNA-1:exon:23215;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69759950 | 69760036 | 69759950 | ID=Msa0181520-mRNA-1:exon:23216;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69760141 | 69760265 | 69760141 | ID=Msa0181520-mRNA-1:exon:23217;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69760366 | 69760426 | 69760366 | ID=Msa0181520-mRNA-1:exon:23218;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69761231 | 69761287 | 69761231 | ID=Msa0181520-mRNA-1:exon:23219;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69762352 | 69762439 | 69762352 | ID=Msa0181520-mRNA-1:exon:23220;Parent=Msa0181520-mRNA-1 |
| chr1_4 | exon | 69762577 | 69763145 | 69762577 | ID=Msa0181520-mRNA-1:exon:23221;Parent=Msa0181520-mRNA-1 |
| chr1_4 | five_prime_UTR | 69752530 | 69753135 | 69752530 | ID=Msa0181520-mRNA-1:five_prime_utr;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69753136 | 69753262 | 69753136 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69753343 | 69753425 | 69753343 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69756914 | 69757043 | 69756914 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69759234 | 69759313 | 69759234 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69759950 | 69760036 | 69759950 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69760141 | 69760265 | 69760141 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69760366 | 69760426 | 69760366 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69761231 | 69761287 | 69761231 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69762352 | 69762439 | 69762352 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | CDS | 69762577 | 69762635 | 69762577 | ID=Msa0181520-mRNA-1:cds;Parent=Msa0181520-mRNA-1 |
| chr1_4 | three_prime_UTR | 69762636 | 69763145 | 69762636 | ID=Msa0181520-mRNA-1:three_prime_utr;Parent=Msa0181520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
