Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091290 | XP_024629421.2 | 89.387 | 669 | 51 | 3 | 3 | 671 | 2 | 650 | 0.0 | 1224 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091290 | sp|Q8W595|SUVR4_ARATH | 66.465 | 331 | 109 | 2 | 338 | 667 | 135 | 464 | 5.41e-167 | 492 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091290 | A0A396K241 | 89.387 | 669 | 51 | 3 | 3 | 671 | 2 | 650 | 0.0 | 1224 |
Gene ID | Type | Classification |
---|---|---|
Msa0091290 | TR | SET |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0032050 | Msa0091290 | 0.924587 | 5.771306e-90 | -8.615850e-47 |
Msa0079330 | Msa0091290 | 0.946326 | 5.712127e-105 | -8.615850e-47 |
Msa0091290 | Msa0172100 | 0.894173 | 3.163551e-75 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091290 | MtrunA17_Chr1g0190311 | 89.387 | 669 | 51 | 3 | 3 | 671 | 2 | 650 | 0.0 | 1224 |
Msa0091290 | MtrunA17_Chr8g0392541 | 87.162 | 296 | 18 | 2 | 259 | 553 | 29 | 305 | 6.07e-180 | 515 |
Msa0091290 | MtrunA17_Chr1g0183321 | 59.639 | 332 | 129 | 5 | 336 | 665 | 418 | 746 | 6.70e-140 | 428 |
Msa0091290 | MtrunA17_Chr7g0262001 | 56.707 | 328 | 139 | 2 | 338 | 665 | 378 | 702 | 1.82e-129 | 400 |
Msa0091290 | MtrunA17_Chr3g0080761 | 27.811 | 338 | 171 | 10 | 346 | 661 | 374 | 660 | 2.38e-31 | 130 |
Msa0091290 | MtrunA17_Chr8g0354821 | 27.083 | 336 | 173 | 9 | 346 | 661 | 401 | 684 | 1.04e-30 | 128 |
Msa0091290 | MtrunA17_Chr7g0255181 | 28.221 | 326 | 166 | 10 | 346 | 661 | 434 | 701 | 2.37e-30 | 127 |
Msa0091290 | MtrunA17_Chr5g0403241 | 38.710 | 186 | 106 | 6 | 479 | 663 | 1327 | 1505 | 6.84e-28 | 120 |
Msa0091290 | MtrunA17_Chr5g0399801 | 28.529 | 340 | 154 | 12 | 346 | 660 | 809 | 1084 | 1.18e-26 | 116 |
Msa0091290 | MtrunA17_Chr8g0373821 | 38.798 | 183 | 101 | 6 | 479 | 660 | 361 | 533 | 1.36e-26 | 114 |
Msa0091290 | MtrunA17_Chr4g0003501 | 28.097 | 331 | 165 | 10 | 346 | 660 | 677 | 950 | 7.33e-26 | 114 |
Msa0091290 | MtrunA17_Chr4g0075321 | 37.766 | 188 | 105 | 6 | 479 | 663 | 884 | 1062 | 1.68e-25 | 113 |
Msa0091290 | MtrunA17_Chr6g0476111 | 34.112 | 214 | 115 | 7 | 473 | 663 | 482 | 692 | 5.19e-24 | 107 |
Msa0091290 | MtrunA17_Chr4g0003511 | 27.327 | 333 | 167 | 11 | 346 | 660 | 772 | 1047 | 5.84e-24 | 108 |
Msa0091290 | MtrunA17_Chr6g0476121 | 28.280 | 343 | 167 | 12 | 347 | 663 | 352 | 641 | 8.40e-24 | 106 |
Msa0091290 | MtrunA17_Chr7g0252211 | 32.394 | 213 | 120 | 8 | 473 | 663 | 545 | 755 | 2.11e-22 | 102 |
Msa0091290 | MtrunA17_Chr1g0170651 | 28.527 | 319 | 154 | 12 | 346 | 660 | 293 | 541 | 1.49e-19 | 93.2 |
Msa0091290 | MtrunA17_Chr6g0460921 | 34.969 | 163 | 95 | 3 | 481 | 638 | 241 | 397 | 1.32e-18 | 89.0 |
Msa0091290 | MtrunA17_Chr8g0368901 | 25.155 | 322 | 160 | 11 | 338 | 639 | 497 | 757 | 9.67e-18 | 87.8 |
Msa0091290 | MtrunA17_Chr3g0094881 | 24.919 | 309 | 163 | 10 | 348 | 640 | 369 | 624 | 1.11e-17 | 87.4 |
Msa0091290 | MtrunA17_Chr7g0232811 | 32.039 | 206 | 107 | 8 | 486 | 660 | 331 | 534 | 1.26e-17 | 86.7 |
Msa0091290 | MtrunA17_Chr1g0163041 | 31.034 | 203 | 118 | 7 | 454 | 639 | 368 | 565 | 1.77e-17 | 86.7 |
Msa0091290 | MtrunA17_Chr1g0163051 | 26.198 | 313 | 160 | 12 | 348 | 645 | 396 | 652 | 3.78e-17 | 85.9 |
Msa0091290 | MtrunA17_Chr8g0368911 | 24.534 | 322 | 142 | 10 | 348 | 639 | 500 | 750 | 3.76e-16 | 82.8 |
Msa0091290 | MtrunA17_Chr7g0232841 | 31.731 | 208 | 106 | 10 | 486 | 660 | 319 | 523 | 1.27e-15 | 80.5 |
Msa0091290 | MtrunA17_Chr7g0232981 | 30.208 | 192 | 115 | 6 | 486 | 660 | 322 | 511 | 2.66e-15 | 79.3 |
Msa0091290 | MtrunA17_Chr1g0201311 | 29.508 | 183 | 90 | 7 | 487 | 660 | 67 | 219 | 1.05e-13 | 74.3 |
Msa0091290 | MtrunA17_Chr3g0125251 | 32.804 | 189 | 104 | 8 | 475 | 661 | 1294 | 1461 | 1.17e-13 | 75.1 |
Msa0091290 | MtrunA17_Chr1g0201621 | 28.962 | 183 | 91 | 7 | 487 | 660 | 67 | 219 | 3.07e-13 | 72.8 |
Msa0091290 | MtrunA17_Chr2g0305371 | 29.348 | 184 | 96 | 9 | 483 | 661 | 314 | 468 | 4.06e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091290 | AT3G04380.1 | 66.465 | 331 | 109 | 2 | 338 | 667 | 135 | 464 | 5.49e-168 | 492 |
Msa0091290 | AT3G04380.3 | 66.465 | 331 | 109 | 2 | 338 | 667 | 119 | 448 | 7.82e-168 | 491 |
Msa0091290 | AT3G04380.2 | 66.465 | 331 | 109 | 2 | 338 | 667 | 108 | 437 | 9.12e-168 | 490 |
Msa0091290 | AT3G04380.4 | 66.465 | 331 | 109 | 2 | 338 | 667 | 135 | 464 | 1.40e-167 | 491 |
Msa0091290 | AT3G04380.6 | 66.465 | 331 | 109 | 2 | 338 | 667 | 108 | 437 | 2.11e-167 | 489 |
Msa0091290 | AT3G04380.5 | 66.465 | 331 | 109 | 2 | 338 | 667 | 92 | 421 | 2.99e-167 | 488 |
Msa0091290 | AT5G43990.8 | 54.328 | 335 | 147 | 2 | 335 | 669 | 313 | 641 | 4.85e-122 | 379 |
Msa0091290 | AT5G43990.12 | 54.328 | 335 | 147 | 2 | 335 | 669 | 313 | 641 | 4.85e-122 | 379 |
Msa0091290 | AT5G43990.6 | 54.328 | 335 | 147 | 2 | 335 | 669 | 313 | 641 | 4.85e-122 | 379 |
Msa0091290 | AT5G43990.13 | 54.328 | 335 | 147 | 2 | 335 | 669 | 313 | 641 | 4.85e-122 | 379 |
Msa0091290 | AT5G43990.7 | 54.328 | 335 | 147 | 2 | 335 | 669 | 293 | 621 | 7.34e-122 | 378 |
Msa0091290 | AT5G43990.16 | 54.328 | 335 | 147 | 2 | 335 | 669 | 362 | 690 | 2.60e-121 | 379 |
Msa0091290 | AT5G43990.16 | 41.593 | 113 | 58 | 2 | 10 | 119 | 9 | 116 | 1.36e-14 | 78.2 |
Msa0091290 | AT5G43990.5 | 54.328 | 335 | 147 | 2 | 335 | 669 | 362 | 690 | 2.60e-121 | 379 |
Msa0091290 | AT5G43990.5 | 41.593 | 113 | 58 | 2 | 10 | 119 | 9 | 116 | 1.36e-14 | 78.2 |
Msa0091290 | AT5G43990.17 | 54.328 | 335 | 147 | 2 | 335 | 669 | 362 | 690 | 2.60e-121 | 379 |
Msa0091290 | AT5G43990.17 | 41.593 | 113 | 58 | 2 | 10 | 119 | 9 | 116 | 1.36e-14 | 78.2 |
Msa0091290 | AT5G43990.14 | 54.328 | 335 | 147 | 2 | 335 | 669 | 362 | 690 | 2.60e-121 | 379 |
Msa0091290 | AT5G43990.14 | 41.593 | 113 | 58 | 2 | 10 | 119 | 9 | 116 | 1.36e-14 | 78.2 |
Msa0091290 | AT5G43990.3 | 54.328 | 335 | 147 | 2 | 335 | 669 | 382 | 710 | 3.52e-121 | 379 |
Msa0091290 | AT5G43990.3 | 41.593 | 113 | 58 | 2 | 10 | 119 | 9 | 116 | 1.41e-14 | 78.2 |
Msa0091290 | AT5G43990.11 | 54.328 | 335 | 147 | 2 | 335 | 669 | 382 | 710 | 3.52e-121 | 379 |
Msa0091290 | AT5G43990.11 | 41.593 | 113 | 58 | 2 | 10 | 119 | 9 | 116 | 1.41e-14 | 78.2 |
Msa0091290 | AT5G43990.1 | 54.328 | 335 | 147 | 2 | 335 | 669 | 382 | 710 | 3.52e-121 | 379 |
Msa0091290 | AT5G43990.1 | 41.593 | 113 | 58 | 2 | 10 | 119 | 9 | 116 | 1.41e-14 | 78.2 |
Msa0091290 | AT5G43990.4 | 54.328 | 335 | 147 | 2 | 335 | 669 | 382 | 710 | 3.52e-121 | 379 |
Msa0091290 | AT5G43990.4 | 41.593 | 113 | 58 | 2 | 10 | 119 | 9 | 116 | 1.41e-14 | 78.2 |
Msa0091290 | AT5G43990.9 | 54.328 | 335 | 147 | 2 | 335 | 669 | 405 | 733 | 3.85e-121 | 379 |
Msa0091290 | AT5G43990.9 | 41.593 | 113 | 58 | 2 | 10 | 119 | 32 | 139 | 1.28e-14 | 78.2 |
Msa0091290 | AT5G43990.2 | 54.328 | 335 | 147 | 2 | 335 | 669 | 405 | 733 | 3.85e-121 | 379 |
Msa0091290 | AT5G43990.2 | 41.593 | 113 | 58 | 2 | 10 | 119 | 32 | 139 | 1.28e-14 | 78.2 |
Msa0091290 | AT5G43990.15 | 54.328 | 335 | 147 | 2 | 335 | 669 | 385 | 713 | 4.57e-121 | 379 |
Msa0091290 | AT5G43990.15 | 41.593 | 113 | 58 | 2 | 10 | 119 | 32 | 139 | 1.22e-14 | 78.2 |
Msa0091290 | AT5G43990.10 | 54.328 | 335 | 147 | 2 | 335 | 669 | 385 | 713 | 4.57e-121 | 379 |
Msa0091290 | AT5G43990.10 | 41.593 | 113 | 58 | 2 | 10 | 119 | 32 | 139 | 1.22e-14 | 78.2 |
Msa0091290 | AT1G04050.3 | 52.410 | 332 | 153 | 2 | 335 | 665 | 292 | 619 | 4.23e-116 | 363 |
Msa0091290 | AT1G04050.2 | 52.410 | 332 | 153 | 2 | 335 | 665 | 396 | 723 | 2.85e-115 | 364 |
Msa0091290 | AT1G04050.1 | 52.410 | 332 | 153 | 2 | 335 | 665 | 396 | 723 | 2.85e-115 | 364 |
Msa0091290 | AT5G04940.2 | 27.381 | 336 | 169 | 10 | 346 | 661 | 386 | 666 | 3.70e-29 | 124 |
Msa0091290 | AT5G04940.1 | 27.381 | 336 | 169 | 10 | 346 | 661 | 386 | 666 | 3.70e-29 | 124 |
Msa0091290 | AT2G23740.1 | 39.683 | 189 | 97 | 7 | 480 | 661 | 1193 | 1371 | 5.30e-28 | 121 |
Msa0091290 | AT2G23740.3 | 42.857 | 161 | 86 | 5 | 480 | 638 | 1200 | 1356 | 5.41e-28 | 121 |
Msa0091290 | AT2G23740.6 | 42.857 | 161 | 86 | 5 | 480 | 638 | 1200 | 1356 | 5.41e-28 | 121 |
Msa0091290 | AT2G23740.2 | 42.857 | 161 | 86 | 5 | 480 | 638 | 1200 | 1356 | 5.41e-28 | 121 |
Msa0091290 | AT1G73100.1 | 28.012 | 332 | 173 | 10 | 346 | 661 | 384 | 665 | 4.03e-26 | 114 |
Msa0091290 | AT2G22740.2 | 28.409 | 352 | 171 | 13 | 337 | 663 | 493 | 788 | 4.57e-25 | 111 |
Msa0091290 | AT2G22740.1 | 28.409 | 352 | 171 | 13 | 337 | 663 | 493 | 788 | 4.57e-25 | 111 |
Msa0091290 | AT2G35160.5 | 28.481 | 316 | 154 | 11 | 348 | 660 | 507 | 753 | 6.12e-25 | 111 |
Msa0091290 | AT2G35160.2 | 28.481 | 316 | 154 | 11 | 348 | 660 | 543 | 789 | 6.58e-25 | 111 |
Msa0091290 | AT2G35160.3 | 28.481 | 316 | 154 | 11 | 348 | 660 | 543 | 789 | 6.58e-25 | 111 |
Msa0091290 | AT2G35160.1 | 28.481 | 316 | 154 | 11 | 348 | 660 | 543 | 789 | 6.58e-25 | 111 |
Msa0091290 | AT2G35160.4 | 28.481 | 316 | 154 | 11 | 348 | 660 | 543 | 789 | 6.58e-25 | 111 |
Msa0091290 | AT5G13960.1 | 33.491 | 212 | 118 | 7 | 473 | 663 | 413 | 622 | 1.10e-21 | 100 |
Msa0091290 | AT5G13960.2 | 33.491 | 212 | 118 | 7 | 473 | 663 | 279 | 488 | 1.48e-21 | 99.4 |
Msa0091290 | AT3G03750.2 | 34.031 | 191 | 112 | 5 | 476 | 660 | 163 | 345 | 6.61e-21 | 95.5 |
Msa0091290 | AT2G23740.4 | 45.378 | 119 | 60 | 4 | 480 | 596 | 1200 | 1315 | 1.37e-20 | 97.8 |
Msa0091290 | AT2G23740.5 | 45.378 | 119 | 60 | 4 | 480 | 596 | 1200 | 1315 | 1.37e-20 | 97.8 |
Msa0091290 | AT1G17770.1 | 25.000 | 352 | 177 | 16 | 338 | 661 | 397 | 689 | 3.63e-20 | 95.9 |
Msa0091290 | AT4G13460.1 | 26.623 | 308 | 155 | 10 | 348 | 639 | 386 | 638 | 1.82e-18 | 90.5 |
Msa0091290 | AT4G13460.2 | 26.623 | 308 | 155 | 10 | 348 | 639 | 386 | 638 | 1.82e-18 | 90.5 |
Msa0091290 | AT2G24740.1 | 33.508 | 191 | 104 | 8 | 489 | 661 | 566 | 751 | 1.19e-16 | 84.7 |
Msa0091290 | AT2G33290.1 | 24.675 | 308 | 160 | 10 | 348 | 639 | 388 | 639 | 1.49e-14 | 77.8 |
Msa0091290 | AT2G33290.3 | 24.675 | 308 | 160 | 10 | 348 | 639 | 388 | 639 | 1.49e-14 | 77.8 |
Msa0091290 | AT2G33290.4 | 24.675 | 308 | 160 | 10 | 348 | 639 | 388 | 639 | 1.49e-14 | 77.8 |
Msa0091290 | AT2G33290.2 | 24.675 | 308 | 160 | 10 | 348 | 639 | 388 | 639 | 1.49e-14 | 77.8 |
Msa0091290 | AT3G03750.1 | 30.159 | 189 | 106 | 6 | 476 | 660 | 163 | 329 | 3.25e-13 | 72.0 |
Msa0091290 | AT1G76710.2 | 26.404 | 178 | 102 | 6 | 487 | 660 | 72 | 224 | 8.08e-13 | 72.0 |
Msa0091290 | AT1G76710.1 | 26.404 | 178 | 102 | 6 | 487 | 660 | 72 | 224 | 8.08e-13 | 72.0 |
Msa0091290 | AT1G76710.3 | 26.404 | 178 | 102 | 6 | 487 | 660 | 72 | 224 | 8.83e-13 | 72.0 |
Msa0091290 | AT1G76710.4 | 26.404 | 178 | 102 | 6 | 487 | 660 | 72 | 224 | 9.36e-13 | 71.6 |
Msa0091290 | AT1G77300.2 | 29.381 | 194 | 104 | 8 | 475 | 661 | 996 | 1163 | 8.06e-12 | 69.7 |
Msa0091290 | AT1G77300.1 | 29.381 | 194 | 104 | 8 | 475 | 661 | 996 | 1163 | 9.76e-12 | 69.3 |
Msa0091290 | AT4G30860.1 | 28.415 | 183 | 99 | 8 | 483 | 661 | 307 | 461 | 1.35e-11 | 68.2 |
Find 186 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGGAATGTAATTAAATTT+TGG | 0.115496 | 1_2:-73447904 | None:intergenic |
TCACATCTTTGTTTGTAAAA+AGG | 0.151094 | 1_2:-73449985 | None:intergenic |
TTGGATTCTTGAAGCCCTTT+TGG | 0.240953 | 1_2:-73453738 | None:intergenic |
CTAAGTCCTTCATAGCATTA+AGG | 0.248100 | 1_2:-73445795 | None:intergenic |
AGATGTCCCTTGCATGATTC+AGG | 0.249379 | 1_2:-73448198 | None:intergenic |
TGAAATTATTTGCAGGATTA+TGG | 0.255105 | 1_2:+73451350 | Msa0091290:intron |
TAAATTGTGATGCTGCATTA+AGG | 0.275228 | 1_2:+73447737 | Msa0091290:CDS |
AATATCAATATTACCCTTAC+AGG | 0.275906 | 1_2:-73447677 | None:intergenic |
TCATTCTTAGTCCTCTCAAT+TGG | 0.283626 | 1_2:-73448168 | None:intergenic |
AATAGTTTACCTGCAATTTA+CGG | 0.292002 | 1_2:-73448305 | None:intergenic |
GGGTTCGGAAGTGGGATTAA+AGG | 0.294538 | 1_2:+73448963 | Msa0091290:CDS |
TGCTTGGATGCAACACATAA+TGG | 0.299187 | 1_2:+73449000 | Msa0091290:CDS |
TGTAAGGGTAATATTGATAT+TGG | 0.302485 | 1_2:+73447679 | Msa0091290:CDS |
TCTCCATCATGACAACTTAC+TGG | 0.309078 | 1_2:-73446202 | None:intergenic |
AGGTAAAGGAGGGGAGAGGC+TGG | 0.360422 | 1_2:+73453801 | Msa0091290:CDS |
AGGTTTAAGCCGTAAATTGC+AGG | 0.364369 | 1_2:+73448296 | Msa0091290:CDS |
TCCCTTGCATGATTCAGGTT+TGG | 0.366414 | 1_2:-73448193 | None:intergenic |
TCTAGTTAGGAAGTTTATAA+AGG | 0.366891 | 1_2:+73448218 | Msa0091290:CDS |
CTTTGATACATTGTGTTACA+TGG | 0.369163 | 1_2:-73447922 | None:intergenic |
TTAGTATCGCCAGTTTCTAT+TGG | 0.370950 | 1_2:+73453715 | Msa0091290:CDS |
CAGTCTGCATCAAGTGTTAC+AGG | 0.375742 | 1_2:-73448940 | None:intergenic |
TATTGGTTCTTCTTCACCCT+TGG | 0.376191 | 1_2:+73447696 | Msa0091290:CDS |
GATCAGAAGATTAAAGTATC+AGG | 0.378923 | 1_2:+73446523 | Msa0091290:CDS |
GATCAGAAGATTAAAGTATC+AGG | 0.378923 | 1_2:+73447094 | Msa0091290:CDS |
GATTGCTGCTCCGATTGTTC+AGG | 0.382082 | 1_2:+73447985 | Msa0091290:CDS |
CCTGTCATATAATTCTGAAT+TGG | 0.382980 | 1_2:-73448881 | None:intergenic |
TAAGTCCTTCATAGCATTAA+GGG | 0.383476 | 1_2:-73445794 | None:intergenic |
AGTTTCCTGTTTAAAAGTCT+TGG | 0.385683 | 1_2:-73446326 | None:intergenic |
GGCTTGAATTTAAATCGAAA+TGG | 0.393994 | 1_2:+73447763 | Msa0091290:CDS |
ATTGGTTCTTCTTCACCCTT+GGG | 0.396671 | 1_2:+73447697 | Msa0091290:CDS |
CATTCTTAGTCCTCTCAATT+GGG | 0.399084 | 1_2:-73448167 | None:intergenic |
CAACATTGAAATGCTTCAAT+AGG | 0.399389 | 1_2:-73451398 | None:intergenic |
CTTTGAGTCAAAGGAAGATA+AGG | 0.400162 | 1_2:+73445954 | Msa0091290:CDS |
TGAAACCCTCTCAAATTTCC+AGG | 0.401603 | 1_2:+73446350 | Msa0091290:CDS |
ACCAAGTGAAGTTTCTGTTT+AGG | 0.402308 | 1_2:-73446229 | None:intergenic |
AATATTACCCTTACAGGTTC+TGG | 0.402438 | 1_2:-73447671 | None:intergenic |
GACTCAAGAAGGAAAGGGCT+GGG | 0.404908 | 1_2:+73448792 | Msa0091290:CDS |
TTATTGAAGATGACAATTAT+CGG | 0.405456 | 1_2:+73445887 | Msa0091290:CDS |
ACTTGCTCGGATTGCGGATG+AGG | 0.407887 | 1_2:+73447963 | Msa0091290:CDS |
TGCCGTGATAAGAAACAAAA+AGG | 0.409219 | 1_2:+73451437 | Msa0091290:CDS |
AACCAGTTCGCAGGCATTCA+TGG | 0.414985 | 1_2:+73446390 | Msa0091290:CDS |
GTTTCCTGTTTAAAAGTCTT+GGG | 0.416453 | 1_2:-73446325 | None:intergenic |
TCAGGTGTCTCCACTTCAAC+AGG | 0.424005 | 1_2:-73449702 | None:intergenic |
CATGCAAGGGACATCTAGTT+AGG | 0.424215 | 1_2:+73448205 | Msa0091290:CDS |
GGAAGTTTATAAAGGAGTGC+TGG | 0.425648 | 1_2:+73448226 | Msa0091290:CDS |
GCCAGTTTCTATTGGCCAAA+AGG | 0.427319 | 1_2:+73453723 | Msa0091290:CDS |
TACTAATCCAAGGGCAATCA+AGG | 0.437821 | 1_2:+73445771 | Msa0091290:CDS |
CTGTAACACTTGATGCAGAC+TGG | 0.438878 | 1_2:+73448941 | Msa0091290:CDS |
GCTTGGATGCAACACATAAT+GGG | 0.439200 | 1_2:+73449001 | Msa0091290:CDS |
TAATAACACCAGAACCTGTA+AGG | 0.441363 | 1_2:+73447663 | Msa0091290:CDS |
GAATGCCTGCGAACTGGTTG+TGG | 0.444610 | 1_2:-73446386 | None:intergenic |
TGTGCATGCTCTCAAGAAAC+TGG | 0.447117 | 1_2:+73448033 | Msa0091290:CDS |
GTGACATGCAGTGTGGAAAT+CGG | 0.448940 | 1_2:+73448262 | Msa0091290:CDS |
TTGCAAGATTCATCAATCAT+AGG | 0.449185 | 1_2:+73449028 | Msa0091290:CDS |
TTAAGGGCCTTGATTGCCCT+TGG | 0.450224 | 1_2:-73445778 | None:intergenic |
AAGACAGTCGCCTGAACAAT+CGG | 0.460644 | 1_2:-73447995 | None:intergenic |
GCAACTTGTCGAAACAGATC+CGG | 0.461669 | 1_2:-73446569 | None:intergenic |
GCAACTTGTCGAAACAGATC+CGG | 0.461669 | 1_2:-73447140 | None:intergenic |
CCAGTTTCTATTGGCCAAAA+GGG | 0.463265 | 1_2:+73453724 | Msa0091290:CDS |
ATTTAAATCGAAATGGATCA+AGG | 0.466304 | 1_2:+73447770 | Msa0091290:CDS |
CAGGTGTTCTTGACTCAAGA+AGG | 0.467731 | 1_2:+73448781 | Msa0091290:intron |
GGATGGCTAAGTCCATCAAT+TGG | 0.470158 | 1_2:-73447043 | None:intergenic |
CATTGTAAAGATCCAATTGA+TGG | 0.470887 | 1_2:+73446460 | Msa0091290:CDS |
CATTGTAAAGATCCAATTGA+TGG | 0.470887 | 1_2:+73447031 | Msa0091290:CDS |
TCCTTTGTCTGTGAATATGC+AGG | 0.471253 | 1_2:+73448847 | Msa0091290:CDS |
CTTTGAGTCAAAGGAAGATA+AGG | 0.471512 | 1_2:+73445927 | Msa0091290:CDS |
AATACACATAATGATGATGC+TGG | 0.471715 | 1_2:-73448134 | None:intergenic |
CAAGGCCCTTAATGCTATGA+AGG | 0.475493 | 1_2:+73445789 | Msa0091290:CDS |
TGCAGACTGGGGTTCGGAAG+TGG | 0.479829 | 1_2:+73448954 | Msa0091290:CDS |
GGATGGCTAGGTCCATCAAT+TGG | 0.481202 | 1_2:-73446472 | None:intergenic |
ATGTCAATATTTCACTTGCT+CGG | 0.482161 | 1_2:+73447950 | Msa0091290:CDS |
ATATGTATGTCTATCATTGC+CGG | 0.482653 | 1_2:-73448917 | None:intergenic |
TTCACAGACAAAGGATCCCT+TGG | 0.485409 | 1_2:-73448839 | None:intergenic |
TTTGACAGTAAGATTTCCAT+TGG | 0.487180 | 1_2:-73447584 | None:intergenic |
GGTAAAGGAGGGGAGAGGCT+GGG | 0.488450 | 1_2:+73453802 | Msa0091290:CDS |
ACAGATCCGGGATGAAACTT+AGG | 0.488825 | 1_2:-73446556 | None:intergenic |
ACAGATCCGGGATGAAACTT+AGG | 0.488825 | 1_2:-73447127 | None:intergenic |
TGACTCAAGAAGGAAAGGGC+TGG | 0.490394 | 1_2:+73448791 | Msa0091290:CDS |
TGTGGGATTCATATCTTGCC+TGG | 0.492190 | 1_2:-73446368 | None:intergenic |
ATCCATGAATGCCTGCGAAC+TGG | 0.494735 | 1_2:-73446392 | None:intergenic |
ATTGAAATGCTTCAATAGGA+TGG | 0.499430 | 1_2:-73451394 | None:intergenic |
AGATTGCATGTCCATGGTAA+AGG | 0.499567 | 1_2:+73448107 | Msa0091290:CDS |
ACATGATAATAGTGGCGGTC+AGG | 0.500724 | 1_2:-73449720 | None:intergenic |
AAATTCTCACATGATAATAG+TGG | 0.504059 | 1_2:-73449728 | None:intergenic |
ACTTGATGCAGACTGGGGTT+CGG | 0.504834 | 1_2:+73448948 | Msa0091290:CDS |
GGATGAAGAGGCATTATGCT+TGG | 0.505357 | 1_2:+73448984 | Msa0091290:CDS |
AGATGCATACTTTGAGTCAA+AGG | 0.508357 | 1_2:+73445918 | Msa0091290:CDS |
CAACTTGTCGAAACAGATCC+GGG | 0.509028 | 1_2:-73446568 | None:intergenic |
CAACTTGTCGAAACAGATCC+GGG | 0.509028 | 1_2:-73447139 | None:intergenic |
ACCTGCAGATGATGCTGCCC+CGG | 0.510370 | 1_2:-73446437 | None:intergenic |
CTTAATGCTATGAAGGACTT+AGG | 0.511792 | 1_2:+73445796 | Msa0091290:CDS |
TTTGACAGATTGCATGTCCA+TGG | 0.511932 | 1_2:+73448101 | Msa0091290:CDS |
CCAATTCAGAATTATATGAC+AGG | 0.514306 | 1_2:+73448881 | Msa0091290:CDS |
GGCTCACTAAATGCTTCCAA+TGG | 0.514313 | 1_2:+73447568 | Msa0091290:intron |
TATGTTGAAGACATAACAAA+AGG | 0.515772 | 1_2:+73447829 | Msa0091290:CDS |
TGTAACACTTGATGCAGACT+GGG | 0.519571 | 1_2:+73448942 | Msa0091290:CDS |
TGACATGCAGTGTGGAAATC+GGG | 0.519904 | 1_2:+73448263 | Msa0091290:CDS |
TAAGGCATACTTTGAGTCAA+AGG | 0.523841 | 1_2:+73445945 | Msa0091290:CDS |
ACCTTCACATTCTGTGCAGT+AGG | 0.524995 | 1_2:-73453782 | None:intergenic |
AATAGACATTCCTGTTGAAG+TGG | 0.525349 | 1_2:+73449692 | Msa0091290:CDS |
GCAGACTGGGGTTCGGAAGT+GGG | 0.526732 | 1_2:+73448955 | Msa0091290:CDS |
GACAGGATTGTGCATAGTAC+CGG | 0.531414 | 1_2:+73448898 | Msa0091290:CDS |
GATTGCCCTTGGATTAGTAG+TGG | 0.531861 | 1_2:-73445767 | None:intergenic |
TCTGGTGTTATTATTGCATG+TGG | 0.532171 | 1_2:-73447653 | None:intergenic |
CTTAGGAATCTCGGAGGTCG+AGG | 0.532485 | 1_2:+73445813 | Msa0091290:CDS |
ATAGATAGAAAGATCTATCC+CGG | 0.532951 | 1_2:+73446418 | Msa0091290:CDS |
TATTCTGATACACATCTGAC+AGG | 0.533483 | 1_2:-73447609 | None:intergenic |
GTTCTTGACTCAAGAAGGAA+AGG | 0.536862 | 1_2:+73448786 | Msa0091290:CDS |
CCCGGGGCAGCATCATCTGC+AGG | 0.537644 | 1_2:+73446436 | Msa0091290:CDS |
AAGGAGTGCTGGAGGAAATG+TGG | 0.543111 | 1_2:+73448237 | Msa0091290:CDS |
TTCTGTGCAGTAGGATGTGG+TGG | 0.543716 | 1_2:-73453773 | None:intergenic |
AGAAGATTTAACTTCTCCCA+AGG | 0.546782 | 1_2:-73447713 | None:intergenic |
ATGCTTCAATAGGATGGGTA+TGG | 0.547473 | 1_2:-73451388 | None:intergenic |
ACATTCTGTGCAGTAGGATG+TGG | 0.549149 | 1_2:-73453776 | None:intergenic |
GTGAAGGTAAAGGAGGGGAG+AGG | 0.552043 | 1_2:+73453797 | Msa0091290:CDS |
GCTCCAGTAAGTTGTCATGA+TGG | 0.552655 | 1_2:+73446199 | Msa0091290:CDS |
GAATCCCACAACCAGTTCGC+AGG | 0.552736 | 1_2:+73446381 | Msa0091290:CDS |
TATTTCACTTGCTCGGATTG+CGG | 0.555234 | 1_2:+73447957 | Msa0091290:CDS |
TATGTCTTCAACATATCGAA+AGG | 0.556421 | 1_2:-73447821 | None:intergenic |
TGCACAGAATGTGAAGGTAA+AGG | 0.556996 | 1_2:+73453787 | Msa0091290:CDS |
TTGAAATGCTTCAATAGGAT+GGG | 0.559393 | 1_2:-73451393 | None:intergenic |
TCACAGACAAAGGATCCCTT+GGG | 0.563094 | 1_2:-73448838 | None:intergenic |
CTGGTGTTATTATTGCATGT+GGG | 0.563538 | 1_2:-73447652 | None:intergenic |
CCTGCAGATGATGCTGCCCC+GGG | 0.564331 | 1_2:-73446436 | None:intergenic |
TGTGATGCTGCATTAAGGAC+TGG | 0.565305 | 1_2:+73447742 | Msa0091290:CDS |
CTTGGTAGATATAGACAACC+AGG | 0.566110 | 1_2:+73446246 | Msa0091290:CDS |
ATCTTGCCTGGAAATTTGAG+AGG | 0.568497 | 1_2:-73446356 | None:intergenic |
CTCTGAATAGAAGGATGGCT+AGG | 0.569399 | 1_2:-73446484 | None:intergenic |
TATGAAGGACTTAGGAATCT+CGG | 0.570150 | 1_2:+73445804 | Msa0091290:CDS |
ACTCAAGAAGGAAAGGGCTG+GGG | 0.575809 | 1_2:+73448793 | Msa0091290:CDS |
TCATGACCACTACTAATCCA+AGG | 0.576059 | 1_2:+73445761 | None:intergenic |
GAAGATTTAACTTCTCCCAA+GGG | 0.576136 | 1_2:-73447712 | None:intergenic |
CTCGGAGGTCGAGGTGACAC+CGG | 0.577150 | 1_2:+73445822 | Msa0091290:CDS |
CCTTTGTCTGTGAATATGCA+GGG | 0.579512 | 1_2:+73448848 | Msa0091290:CDS |
AATGCCTGCGAACTGGTTGT+GGG | 0.580159 | 1_2:-73446385 | None:intergenic |
AAAAGGGCTTCAAGAATCCA+AGG | 0.583197 | 1_2:+73453740 | Msa0091290:CDS |
CCCTGCATATTCACAGACAA+AGG | 0.583203 | 1_2:-73448848 | None:intergenic |
TTCTTGACTCAAGAAGGAAA+GGG | 0.585578 | 1_2:+73448787 | Msa0091290:CDS |
ATACACATAATGATGATGCT+GGG | 0.585836 | 1_2:-73448133 | None:intergenic |
TTAGCCATCCTTCTATTCAG+AGG | 0.586545 | 1_2:+73447056 | Msa0091290:CDS |
TAGATAGAAAGATCTATCCC+GGG | 0.588092 | 1_2:+73446419 | Msa0091290:CDS |
ACCTAAACAGAAACTTCACT+TGG | 0.589122 | 1_2:+73446228 | Msa0091290:CDS |
CAGAATGTGAAGGTAAAGGA+GGG | 0.591703 | 1_2:+73453791 | Msa0091290:CDS |
GATAAACCTAAGTTTCATCC+CGG | 0.594944 | 1_2:+73446550 | Msa0091290:CDS |
GATAAACCTAAGTTTCATCC+CGG | 0.594944 | 1_2:+73447121 | Msa0091290:CDS |
ATGCTGGGGTTCCTTTACCA+TGG | 0.596438 | 1_2:-73448118 | None:intergenic |
AACACTAGAAGATTTGCCCA+AGG | 0.602862 | 1_2:+73448822 | Msa0091290:CDS |
GTTTCTTGAGAGCATGCACA+AGG | 0.604033 | 1_2:-73448030 | None:intergenic |
TCTTGCCTGGAAATTTGAGA+GGG | 0.606453 | 1_2:-73446355 | None:intergenic |
GAAGCATTTCAATGTTGTTG+TGG | 0.608519 | 1_2:+73451404 | Msa0091290:CDS |
TCCTGTTTAAAAGTCTTGGG+AGG | 0.609380 | 1_2:-73446322 | None:intergenic |
GTAAAGAGTGCCCAATTGAG+AGG | 0.609557 | 1_2:+73448157 | Msa0091290:CDS |
GAGCATACGAGGAGTTGACC+TGG | 0.613102 | 1_2:+73450008 | Msa0091290:CDS |
CTAGCCATCCTTCTATTCAG+AGG | 0.613137 | 1_2:+73446485 | Msa0091290:CDS |
CAAAGATGTGAGAGCATACG+AGG | 0.613209 | 1_2:+73449997 | Msa0091290:CDS |
GTGGTGGGAGATGACCTCCT+TGG | 0.613281 | 1_2:-73453757 | None:intergenic |
AATAACACCAGAACCTGTAA+GGG | 0.613867 | 1_2:+73447664 | Msa0091290:CDS |
GACCAAACCTGAATCATGCA+AGG | 0.615446 | 1_2:+73448191 | Msa0091290:CDS |
AGTGGGATTAAAGGATGAAG+AGG | 0.621432 | 1_2:+73448972 | Msa0091290:CDS |
ACAGAATGTGAAGGTAAAGG+AGG | 0.621603 | 1_2:+73453790 | Msa0091290:CDS |
GCATGCTCTCAAGAAACTGG+TGG | 0.621903 | 1_2:+73448036 | Msa0091290:CDS |
GTGTTTGCTTACACTTCACA+AGG | 0.626768 | 1_2:+73448060 | Msa0091290:CDS |
AGTTGTCAGCTGATAAAACC+TGG | 0.627203 | 1_2:-73446264 | None:intergenic |
TTCTCACATGATAATAGTGG+CGG | 0.628566 | 1_2:-73449725 | None:intergenic |
TACACATAATGATGATGCTG+GGG | 0.630004 | 1_2:-73448132 | None:intergenic |
ACACTAGAAGATTTGCCCAA+GGG | 0.632238 | 1_2:+73448823 | Msa0091290:CDS |
CATGACCACTACTAATCCAA+GGG | 0.633516 | 1_2:+73445762 | None:intergenic |
AGTTTATAAAGGAGTGCTGG+AGG | 0.635155 | 1_2:+73448229 | Msa0091290:CDS |
ATCAAGGCAAACTCTTTCTG+AGG | 0.636247 | 1_2:+73447786 | Msa0091290:CDS |
TCTGTTTCGACAAGTTGCAA+TGG | 0.640527 | 1_2:+73446574 | Msa0091290:CDS |
TCTGTTTCGACAAGTTGCAA+TGG | 0.640527 | 1_2:+73447145 | Msa0091290:CDS |
AGCATACGAGGAGTTGACCT+GGG | 0.646180 | 1_2:+73450009 | Msa0091290:CDS |
AGAATGTGAAGGTAAAGGAG+GGG | 0.653479 | 1_2:+73453792 | Msa0091290:CDS |
TCCTACTGCACAGAATGTGA+AGG | 0.660378 | 1_2:+73453781 | Msa0091290:CDS |
ACCAAACCTGAATCATGCAA+GGG | 0.670931 | 1_2:+73448192 | Msa0091290:CDS |
CTTTGTCTGTGAATATGCAG+GGG | 0.680388 | 1_2:+73448849 | Msa0091290:CDS |
GTAACACTTGATGCAGACTG+GGG | 0.705204 | 1_2:+73448943 | Msa0091290:CDS |
GTGTTGTCTGTAGAAGACAC+TGG | 0.713454 | 1_2:+73446295 | Msa0091290:CDS |
TGTGGATGTGACATGCAGTG+TGG | 0.717503 | 1_2:+73448255 | Msa0091290:CDS |
ATTAGATGAAACCAACAGTG+AGG | 0.720508 | 1_2:+73447876 | Msa0091290:CDS |
AGATAGAAAGATCTATCCCG+GGG | 0.720635 | 1_2:+73446420 | Msa0091290:CDS |
ATTCTGATACACATCTGACA+GGG | 0.723160 | 1_2:-73447608 | None:intergenic |
TCTGTGCAGTAGGATGTGGT+GGG | 0.730044 | 1_2:-73453772 | None:intergenic |
GGAAATCGGGTAGTGCAACG+AGG | 0.738617 | 1_2:+73448276 | Msa0091290:CDS |
GAAGGACTTAGGAATCTCGG+AGG | 0.784980 | 1_2:+73445807 | Msa0091290:CDS |
AGGGCTTCAAGAATCCAAGG+AGG | 0.789697 | 1_2:+73453743 | Msa0091290:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAAATAAAAGTTAATTATA+CGG | - | chr1_2:73446092-73446111 | None:intergenic | 10.0% |
!!! | CAAAATTGAATATATTTTTT+TGG | - | chr1_2:73452770-73452789 | None:intergenic | 10.0% |
!!! | CAAAAAAATATATTCAATTT+TGG | + | chr1_2:73452768-73452787 | Msa0091290:intron | 10.0% |
!! | ATAAATTGTATGATAAAAAG+TGG | + | chr1_2:73445860-73445879 | Msa0091290:CDS | 15.0% |
!! | TAAATTGTATGATAAAAAGT+GGG | + | chr1_2:73445861-73445880 | Msa0091290:CDS | 15.0% |
!! | TATAAAACACTAGTAATTAA+AGG | - | chr1_2:73446045-73446064 | None:intergenic | 15.0% |
!! | TGATGAATATAATATAGTTA+CGG | - | chr1_2:73447431-73447450 | None:intergenic | 15.0% |
!! | ATATCTTCATTATACTATAA+AGG | - | chr1_2:73448491-73448510 | None:intergenic | 15.0% |
!! | AATTAAAAAAGTTAAGTTTG+TGG | + | chr1_2:73448540-73448559 | Msa0091290:intron | 15.0% |
!!! | TTCAATAACATATTTCTAAT+TGG | + | chr1_2:73449063-73449082 | Msa0091290:intron | 15.0% |
!! | TATTAATGAAACATTTATCA+GGG | - | chr1_2:73450682-73450701 | None:intergenic | 15.0% |
!! | ATATTAATGAAACATTTATC+AGG | - | chr1_2:73450683-73450702 | None:intergenic | 15.0% |
!! | ACAATTAGTAAATACTTATA+AGG | - | chr1_2:73450740-73450759 | None:intergenic | 15.0% |
!!! | ATAATAACTCTTTTCATATA+GGG | - | chr1_2:73450772-73450791 | None:intergenic | 15.0% |
!!! | GAAATTGTGATTTTTTTTTT+GGG | - | chr1_2:73450933-73450952 | None:intergenic | 15.0% |
!!! | AGAAATTGTGATTTTTTTTT+TGG | - | chr1_2:73450934-73450953 | None:intergenic | 15.0% |
!! | GATGAAATTCAATAAAAAAA+TGG | - | chr1_2:73451696-73451715 | None:intergenic | 15.0% |
!! | TTGAACTAAATTAATTGATT+TGG | + | chr1_2:73452234-73452253 | Msa0091290:intron | 15.0% |
!!! | ACTTAATGTCATTATATTTT+GGG | - | chr1_2:73452319-73452338 | None:intergenic | 15.0% |
!!! | AACTTAATGTCATTATATTT+TGG | - | chr1_2:73452320-73452339 | None:intergenic | 15.0% |
!! | ATATAATGACATTAAGTTAT+TGG | + | chr1_2:73452322-73452341 | Msa0091290:intron | 15.0% |
!!! | ACTTTTTTTTTTTTTTTGTG+AGG | - | chr1_2:73453361-73453380 | None:intergenic | 15.0% |
!! | TTATTGAAGATGACAATTAT+CGG | + | chr1_2:73445887-73445906 | Msa0091290:CDS | 20.0% |
!!! | CTTCTAGAAAGAATATAATT+AGG | - | chr1_2:73446158-73446177 | None:intergenic | 20.0% |
!!! | CACAAATTTTAAAAGAAAAC+AGG | + | chr1_2:73446796-73446815 | Msa0091290:intron | 20.0% |
!! | ATGAATATAATCTAGATACA+GGG | - | chr1_2:73446853-73446872 | None:intergenic | 20.0% |
!! | AAAATTCGTGCAAAAAATAT+AGG | - | chr1_2:73447362-73447381 | None:intergenic | 20.0% |
!!! | CACGAATTTTAAAAGAAAAT+AGG | + | chr1_2:73447372-73447391 | Msa0091290:intron | 20.0% |
!! | ATGAATATAATATAGTTACG+GGG | - | chr1_2:73447429-73447448 | None:intergenic | 20.0% |
!! | GATGAATATAATATAGTTAC+GGG | - | chr1_2:73447430-73447449 | None:intergenic | 20.0% |
!!! | TTTTCTTGTTGATTTTCTAT+AGG | + | chr1_2:73446975-73446994 | Msa0091290:intron | 20.0% |
!!! | CATGGAATGTAATTAAATTT+TGG | - | chr1_2:73447907-73447926 | None:intergenic | 20.0% |
!! | TGTTATGTTAGATGAAATTA+TGG | + | chr1_2:73448401-73448420 | Msa0091290:intron | 20.0% |
!! | TTCATTATACTATAAAGGTA+TGG | - | chr1_2:73448486-73448505 | None:intergenic | 20.0% |
!!! | ATCTCCTATATGTTTTTATT+TGG | + | chr1_2:73448581-73448600 | Msa0091290:intron | 20.0% |
!! | TGATCCAAATAAAAACATAT+AGG | - | chr1_2:73448588-73448607 | None:intergenic | 20.0% |
!!! | TTTGGATCACTATATTATTT+TGG | + | chr1_2:73448599-73448618 | Msa0091290:intron | 20.0% |
!!! | TAATAAGAATCACCATTTTA+CGG | - | chr1_2:73448690-73448709 | None:intergenic | 20.0% |
!! | AATAAGTTTAGCAACAATAA+CGG | - | chr1_2:73448720-73448739 | None:intergenic | 20.0% |
!! | AAGAAATAGTTGTACTTATT+TGG | - | chr1_2:73449235-73449254 | None:intergenic | 20.0% |
!!! | AGTACAACTATTTCTTTTTT+TGG | + | chr1_2:73449239-73449258 | Msa0091290:intron | 20.0% |
!!! | GTACAACTATTTCTTTTTTT+GGG | + | chr1_2:73449240-73449259 | Msa0091290:intron | 20.0% |
!! | AAAGAAAAAATGTTGTCTTA+TGG | - | chr1_2:73449492-73449511 | None:intergenic | 20.0% |
!! | AATAACAGAGAAAAGAATAT+TGG | - | chr1_2:73449596-73449615 | None:intergenic | 20.0% |
!! | ATACACAATCAAAATTCAAA+AGG | - | chr1_2:73450115-73450134 | None:intergenic | 20.0% |
!!! | CATAATAACTCTTTTCATAT+AGG | - | chr1_2:73450773-73450792 | None:intergenic | 20.0% |
!! | TAACTAATCATTACATATTC+AGG | + | chr1_2:73450890-73450909 | Msa0091290:intron | 20.0% |
!! | AACTAATCATTACATATTCA+GGG | + | chr1_2:73450891-73450910 | Msa0091290:intron | 20.0% |
!!! | TTTTTGGGTAATAGTTATTT+TGG | - | chr1_2:73450918-73450937 | None:intergenic | 20.0% |
!!! | GTATTTTTTTTCAGCAAAAT+TGG | - | chr1_2:73451183-73451202 | None:intergenic | 20.0% |
!! | TTGTTGAAATAACATAATCA+AGG | + | chr1_2:73451249-73451268 | Msa0091290:intron | 20.0% |
!! | CTCTTATTAATTATAGTTAG+TGG | - | chr1_2:73451732-73451751 | None:intergenic | 20.0% |
!!! | ATCAATTAATTTAGTTCAAG+TGG | - | chr1_2:73452233-73452252 | None:intergenic | 20.0% |
!!! | AACTAAATTAATTGATTTGG+TGG | + | chr1_2:73452237-73452256 | Msa0091290:intron | 20.0% |
!! | AATTGAATCTATTTGAATCA+AGG | - | chr1_2:73452668-73452687 | None:intergenic | 20.0% |
!! | AAAATTGATTATGACATGTT+TGG | - | chr1_2:73452822-73452841 | None:intergenic | 20.0% |
!!! | AAATTGATTTTTCGTATGTT+TGG | - | chr1_2:73452884-73452903 | None:intergenic | 20.0% |
!!! | CATAAGTTTGATTCTAATTT+TGG | - | chr1_2:73452929-73452948 | None:intergenic | 20.0% |
!!! | CAAAATTATTTTCACCTATA+TGG | - | chr1_2:73453641-73453660 | None:intergenic | 20.0% |
!!! | TAGGTGAAAATAATTTTGTT+TGG | + | chr1_2:73453643-73453662 | Msa0091290:intron | 20.0% |
!!! | AGGTGAAAATAATTTTGTTT+GGG | + | chr1_2:73453644-73453663 | Msa0091290:intron | 20.0% |
!!! | TTTGGGAATTCATTTTTTTT+AGG | + | chr1_2:73453661-73453680 | Msa0091290:intron | 20.0% |
!!! | TTGGGAATTCATTTTTTTTA+GGG | + | chr1_2:73453662-73453681 | Msa0091290:intron | 20.0% |
!!! | AATTCATTTTTTTTAGGGAT+TGG | + | chr1_2:73453667-73453686 | Msa0091290:intron | 20.0% |
!!! | TTATACAACTTTTTCAACAC+CGG | - | chr1_2:73445844-73445863 | None:intergenic | 25.0% |
!! | ATATTTTTCCTCTGAATAGA+AGG | - | chr1_2:73446496-73446515 | None:intergenic | 25.0% |
! | GATGAATATAATCTAGATAC+AGG | - | chr1_2:73446854-73446873 | None:intergenic | 25.0% |
!! | CAACAATATATGCTTTTCTT+AGG | - | chr1_2:73446906-73446925 | None:intergenic | 25.0% |
!! | ATATTTTTCCTCTGAATAGA+AGG | - | chr1_2:73446496-73446515 | None:intergenic | 25.0% |
!! | CAACAATATATGCTTTTCTT+AGG | - | chr1_2:73446906-73446925 | None:intergenic | 25.0% |
! | AATATCAATATTACCCTTAC+AGG | - | chr1_2:73447680-73447699 | None:intergenic | 25.0% |
! | TGTAAGGGTAATATTGATAT+TGG | + | chr1_2:73447679-73447698 | Msa0091290:CDS | 25.0% |
! | ATTTAAATCGAAATGGATCA+AGG | + | chr1_2:73447770-73447789 | Msa0091290:CDS | 25.0% |
! | TATGTTGAAGACATAACAAA+AGG | + | chr1_2:73447829-73447848 | Msa0091290:CDS | 25.0% |
! | TCTAGTTAGGAAGTTTATAA+AGG | + | chr1_2:73448218-73448237 | Msa0091290:CDS | 25.0% |
! | AATAGTTTACCTGCAATTTA+CGG | - | chr1_2:73448308-73448327 | None:intergenic | 25.0% |
! | ATACGAATGCAATATGTTTA+AGG | + | chr1_2:73448427-73448446 | Msa0091290:intron | 25.0% |
! | AAGGTATGGAATATAAATAG+AGG | - | chr1_2:73448472-73448491 | None:intergenic | 25.0% |
! | TCTGAATTTCTAACTTGATT+AGG | - | chr1_2:73448514-73448533 | None:intergenic | 25.0% |
!! | AATAAGAATCACCATTTTAC+GGG | - | chr1_2:73448689-73448708 | None:intergenic | 25.0% |
! | TATTGTTGCTAAACTTATTG+TGG | + | chr1_2:73448721-73448740 | Msa0091290:intron | 25.0% |
!!! | ACTATTTCTTTTTTTGGGTT+TGG | + | chr1_2:73449245-73449264 | Msa0091290:intron | 25.0% |
! | TCAATCATAATGCAAGAAAT+TGG | - | chr1_2:73449438-73449457 | None:intergenic | 25.0% |
! | AAATTCTCACATGATAATAG+TGG | - | chr1_2:73449731-73449750 | None:intergenic | 25.0% |
! | ACTATTATCATGTGAGAATT+TGG | + | chr1_2:73449730-73449749 | Msa0091290:intron | 25.0% |
! | TGCATAATATATGAAAGATC+CGG | + | chr1_2:73449857-73449876 | Msa0091290:intron | 25.0% |
!! | CACATCTTTGTTTGTAAAAA+GGG | - | chr1_2:73449987-73450006 | None:intergenic | 25.0% |
!! | TCACATCTTTGTTTGTAAAA+AGG | - | chr1_2:73449988-73450007 | None:intergenic | 25.0% |
! | AAATGATATGTATTGTTCTG+AGG | - | chr1_2:73450041-73450060 | None:intergenic | 25.0% |
! | GATAGGATATAAAATCATCA+TGG | - | chr1_2:73450193-73450212 | None:intergenic | 25.0% |
! | TAAGATAAGGTATGTATAAG+GGG | - | chr1_2:73450215-73450234 | None:intergenic | 25.0% |
! | GTAAGATAAGGTATGTATAA+GGG | - | chr1_2:73450216-73450235 | None:intergenic | 25.0% |
! | TTCTTAATGGGAAAATACTT+GGG | + | chr1_2:73450272-73450291 | Msa0091290:intron | 25.0% |
! | GTTGTCTAATGTGAAAAAAT+AGG | - | chr1_2:73450515-73450534 | None:intergenic | 25.0% |
! | TATCATTGTGTACTAAGTAT+AGG | - | chr1_2:73451041-73451060 | None:intergenic | 25.0% |
!!! | AGACAACTTTAATTTGAACA+TGG | + | chr1_2:73451085-73451104 | Msa0091290:intron | 25.0% |
! | AATTTAACACCTGAAAATTG+TGG | + | chr1_2:73451142-73451161 | Msa0091290:intron | 25.0% |
!! | AAAGATTTACCACAATTTTC+AGG | - | chr1_2:73451154-73451173 | None:intergenic | 25.0% |
! | TGAAATTATTTGCAGGATTA+TGG | + | chr1_2:73451350-73451369 | Msa0091290:intron | 25.0% |
!! | GGTTTGTGTATGAATTTTAA+GGG | - | chr1_2:73451808-73451827 | None:intergenic | 25.0% |
!! | AGGTTTGTGTATGAATTTTA+AGG | - | chr1_2:73451809-73451828 | None:intergenic | 25.0% |
! | CTCAAAATAATAGTCATTCA+AGG | - | chr1_2:73451829-73451848 | None:intergenic | 25.0% |
!!! | GAATGACTATTATTTTGAGA+CGG | + | chr1_2:73451830-73451849 | Msa0091290:intron | 25.0% |
!!! | AATGACTATTATTTTGAGAC+GGG | + | chr1_2:73451831-73451850 | Msa0091290:intron | 25.0% |
!!! | ATTTTTTTGTCTTAACTCCA+CGG | + | chr1_2:73452074-73452093 | Msa0091290:intron | 25.0% |
! | AATCAAACTCTAGATTACAA+AGG | - | chr1_2:73452119-73452138 | None:intergenic | 25.0% |
!! | TTTGTAATCTAGAGTTTGAT+TGG | + | chr1_2:73452118-73452137 | Msa0091290:intron | 25.0% |
!! | TTGTAATCTAGAGTTTGATT+GGG | + | chr1_2:73452119-73452138 | Msa0091290:intron | 25.0% |
! | TTTCTGATGGAAACAATATT+TGG | - | chr1_2:73452162-73452181 | None:intergenic | 25.0% |
! | TTTGTTTGATTACTCTCAAA+TGG | - | chr1_2:73452472-73452491 | None:intergenic | 25.0% |
!!! | TATTTTTTTGGTTGTGTCTA+GGG | - | chr1_2:73452758-73452777 | None:intergenic | 25.0% |
!!! | ATATTTTTTTGGTTGTGTCT+AGG | - | chr1_2:73452759-73452778 | None:intergenic | 25.0% |
!! | TAATTTTCTTAGACACTTAC+TGG | - | chr1_2:73453064-73453083 | None:intergenic | 25.0% |
! | GAGTAAAGGAAAATAATGTT+TGG | - | chr1_2:73453095-73453114 | None:intergenic | 25.0% |
!!! | TTCTTTTGATATGTTTTTGC+AGG | + | chr1_2:73453196-73453215 | Msa0091290:intron | 25.0% |
! | GTCAATTGAGTTAAGTTTAA+CGG | - | chr1_2:73453291-73453310 | None:intergenic | 25.0% |
!! | TGTTAAATGTTCTTTCTAGT+CGG | + | chr1_2:73453559-73453578 | Msa0091290:intron | 25.0% |
TAAGTCCTTCATAGCATTAA+GGG | - | chr1_2:73445797-73445816 | None:intergenic | 30.0% | |
GTTTCCTGTTTAAAAGTCTT+GGG | - | chr1_2:73446328-73446347 | None:intergenic | 30.0% | |
AGTTTCCTGTTTAAAAGTCT+TGG | - | chr1_2:73446329-73446348 | None:intergenic | 30.0% | |
ATAGATAGAAAGATCTATCC+CGG | + | chr1_2:73446418-73446437 | Msa0091290:CDS | 30.0% | |
CATTGTAAAGATCCAATTGA+TGG | + | chr1_2:73446460-73446479 | Msa0091290:CDS | 30.0% | |
! | GATCAGAAGATTAAAGTATC+AGG | + | chr1_2:73446523-73446542 | Msa0091290:CDS | 30.0% |
AGGACAAATGAAAGAAAAAC+AGG | - | chr1_2:73446694-73446713 | None:intergenic | 30.0% | |
AGATGCAGAAAACTTTAAGT+TGG | - | chr1_2:73446879-73446898 | None:intergenic | 30.0% | |
CATTGTAAAGATCCAATTGA+TGG | + | chr1_2:73446460-73446479 | Msa0091290:CDS | 30.0% | |
! | GATCAGAAGATTAAAGTATC+AGG | + | chr1_2:73446523-73446542 | Msa0091290:CDS | 30.0% |
AGGACAAATGAAAGAAAAAC+AGG | - | chr1_2:73446694-73446713 | None:intergenic | 30.0% | |
TTTCATTTGTCCTATCTGAA+TGG | + | chr1_2:73447282-73447301 | Msa0091290:intron | 30.0% | |
! | ATTACAAACCAACTGATTTC+AGG | - | chr1_2:73447329-73447348 | None:intergenic | 30.0% |
TTTGACAGTAAGATTTCCAT+TGG | - | chr1_2:73447587-73447606 | None:intergenic | 30.0% | |
TAAATTGTGATGCTGCATTA+AGG | + | chr1_2:73447737-73447756 | Msa0091290:CDS | 30.0% | |
GGCTTGAATTTAAATCGAAA+TGG | + | chr1_2:73447763-73447782 | Msa0091290:CDS | 30.0% | |
TATGTCTTCAACATATCGAA+AGG | - | chr1_2:73447824-73447843 | None:intergenic | 30.0% | |
CTTTGATACATTGTGTTACA+TGG | - | chr1_2:73447925-73447944 | None:intergenic | 30.0% | |
ATGTCAATATTTCACTTGCT+CGG | + | chr1_2:73447950-73447969 | Msa0091290:CDS | 30.0% | |
! | ATACACATAATGATGATGCT+GGG | - | chr1_2:73448136-73448155 | None:intergenic | 30.0% |
! | AATACACATAATGATGATGC+TGG | - | chr1_2:73448137-73448156 | None:intergenic | 30.0% |
GTTAGTTAAATCCCGTAAAA+TGG | + | chr1_2:73448675-73448694 | Msa0091290:intron | 30.0% | |
CTGAAGAATAAAAGATAAGC+AGG | - | chr1_2:73448764-73448783 | None:intergenic | 30.0% | |
! | CTGCTTATCTTTTATTCTTC+AGG | + | chr1_2:73448762-73448781 | Msa0091290:intron | 30.0% |
CCTGTCATATAATTCTGAAT+TGG | - | chr1_2:73448884-73448903 | None:intergenic | 30.0% | |
CCAATTCAGAATTATATGAC+AGG | + | chr1_2:73448881-73448900 | Msa0091290:CDS | 30.0% | |
ATATGTATGTCTATCATTGC+CGG | - | chr1_2:73448920-73448939 | None:intergenic | 30.0% | |
TTGCAAGATTCATCAATCAT+AGG | + | chr1_2:73449028-73449047 | Msa0091290:CDS | 30.0% | |
! | TGAATAGCCTCAAATGTTTT+TGG | + | chr1_2:73449094-73449113 | Msa0091290:intron | 30.0% |
AAAATCAAGTGCAATTACTG+TGG | + | chr1_2:73449148-73449167 | Msa0091290:intron | 30.0% | |
TGACCTAGATAAAAATCTTC+AGG | + | chr1_2:73449180-73449199 | Msa0091290:intron | 30.0% | |
GACCTAGATAAAAATCTTCA+GGG | + | chr1_2:73449181-73449200 | Msa0091290:intron | 30.0% | |
! | ATCCCTGAAGATTTTTATCT+AGG | - | chr1_2:73449186-73449205 | None:intergenic | 30.0% |
GAAATGAAGAGAAAAAGTGA+AGG | - | chr1_2:73449278-73449297 | None:intergenic | 30.0% | |
TAAGAGAGAGATAAAGAGTA+AGG | + | chr1_2:73449377-73449396 | Msa0091290:intron | 30.0% | |
CAAACAAGATGAATGCAAAA+CGG | - | chr1_2:73449560-73449579 | None:intergenic | 30.0% | |
GCATAATATATGAAAGATCC+GGG | + | chr1_2:73449858-73449877 | Msa0091290:intron | 30.0% | |
!!! | TGTCCTCCATTGATTTTTTT+TGG | - | chr1_2:73449903-73449922 | None:intergenic | 30.0% |
GGTAAGATAAGGTATGTATA+AGG | - | chr1_2:73450217-73450236 | None:intergenic | 30.0% | |
ATTGGAATGTAGGTAAGATA+AGG | - | chr1_2:73450228-73450247 | None:intergenic | 30.0% | |
! | CAAGTATTTTCCCATTAAGA+AGG | - | chr1_2:73450273-73450292 | None:intergenic | 30.0% |
CTTCTTAATGGGAAAATACT+TGG | + | chr1_2:73450271-73450290 | Msa0091290:intron | 30.0% | |
TAGTAAACTTGCCAAATCTT+GGG | + | chr1_2:73450489-73450508 | Msa0091290:intron | 30.0% | |
ATGTCCGAAAAGAAAAAAGA+AGG | + | chr1_2:73450578-73450597 | Msa0091290:intron | 30.0% | |
TGTCCGAAAAGAAAAAAGAA+GGG | + | chr1_2:73450579-73450598 | Msa0091290:intron | 30.0% | |
!!! | TACCCCTTCTTTTTTCTTTT+CGG | - | chr1_2:73450585-73450604 | None:intergenic | 30.0% |
GACTGATATGACAATATTGA+AGG | - | chr1_2:73450718-73450737 | None:intergenic | 30.0% | |
AGATGTGTGAAATTATTTGC+AGG | + | chr1_2:73451343-73451362 | Msa0091290:intron | 30.0% | |
TTGAAATGCTTCAATAGGAT+GGG | - | chr1_2:73451396-73451415 | None:intergenic | 30.0% | |
ATTGAAATGCTTCAATAGGA+TGG | - | chr1_2:73451397-73451416 | None:intergenic | 30.0% | |
CAACATTGAAATGCTTCAAT+AGG | - | chr1_2:73451401-73451420 | None:intergenic | 30.0% | |
!! | GACCTTTTTGTTTCTTATCA+CGG | - | chr1_2:73451442-73451461 | None:intergenic | 30.0% |
!! | AATAAAGTGTTGAACAACCT+TGG | - | chr1_2:73452052-73452071 | None:intergenic | 30.0% |
TTTCCATCAGAAATCAAACT+TGG | + | chr1_2:73452169-73452188 | Msa0091290:intron | 30.0% | |
TTCCATCAGAAATCAAACTT+GGG | + | chr1_2:73452170-73452189 | Msa0091290:intron | 30.0% | |
TTGAACAACATATTAGTGTG+AGG | - | chr1_2:73452349-73452368 | None:intergenic | 30.0% | |
! | GTTTATAGTTCTACATTGGA+TGG | - | chr1_2:73452383-73452402 | None:intergenic | 30.0% |
! | GTGAGTTTATAGTTCTACAT+TGG | - | chr1_2:73452387-73452406 | None:intergenic | 30.0% |
AACATGTCAAAGTGTATGTT+TGG | + | chr1_2:73452490-73452509 | Msa0091290:intron | 30.0% | |
TGCATAATATATGCAAAGTC+TGG | + | chr1_2:73452724-73452743 | Msa0091290:intron | 30.0% | |
GCATAATATATGCAAAGTCT+GGG | + | chr1_2:73452725-73452744 | Msa0091290:intron | 30.0% | |
CATAATATATGCAAAGTCTG+GGG | + | chr1_2:73452726-73452745 | Msa0091290:intron | 30.0% | |
!! | ATGTTTGGTTTCACTTTTAG+AGG | - | chr1_2:73452869-73452888 | None:intergenic | 30.0% |
! | TTATAAGCTAACAGAGTACT+CGG | - | chr1_2:73452954-73452973 | None:intergenic | 30.0% |
TACTGTAGACAATATAGATG+TGG | - | chr1_2:73452997-73453016 | None:intergenic | 30.0% | |
AAAAGTTACATTTCCAAGTG+AGG | + | chr1_2:73453375-73453394 | Msa0091290:intron | 30.0% | |
!!! | TTTTTTAGGGATTGGATTGT+CGG | + | chr1_2:73453675-73453694 | Msa0091290:intron | 30.0% |
CTAAGTCCTTCATAGCATTA+AGG | - | chr1_2:73445798-73445817 | None:intergenic | 35.0% | |
CTTAATGCTATGAAGGACTT+AGG | + | chr1_2:73445796-73445815 | Msa0091290:CDS | 35.0% | |
TATGAAGGACTTAGGAATCT+CGG | + | chr1_2:73445804-73445823 | Msa0091290:CDS | 35.0% | |
AGATGCATACTTTGAGTCAA+AGG | + | chr1_2:73445918-73445937 | Msa0091290:CDS | 35.0% | |
CTTTGAGTCAAAGGAAGATA+AGG | + | chr1_2:73445927-73445946 | Msa0091290:CDS | 35.0% | |
TAAGGCATACTTTGAGTCAA+AGG | + | chr1_2:73445945-73445964 | Msa0091290:CDS | 35.0% | |
CTTTGAGTCAAAGGAAGATA+AGG | + | chr1_2:73445927-73445946 | Msa0091290:CDS | 35.0% | |
ACCTAAACAGAAACTTCACT+TGG | + | chr1_2:73446228-73446247 | Msa0091290:CDS | 35.0% | |
ACCAAGTGAAGTTTCTGTTT+AGG | - | chr1_2:73446232-73446251 | None:intergenic | 35.0% | |
TAGATAGAAAGATCTATCCC+GGG | + | chr1_2:73446419-73446438 | Msa0091290:CDS | 35.0% | |
! | TTTTCCTCTGAATAGAAGGA+TGG | - | chr1_2:73446492-73446511 | None:intergenic | 35.0% |
GATAAACCTAAGTTTCATCC+CGG | + | chr1_2:73446550-73446569 | Msa0091290:CDS | 35.0% | |
GTTGCAATGGTAATCATGAT+AGG | + | chr1_2:73446587-73446606 | Msa0091290:intron | 35.0% | |
AACTTTCTATGAGTCCTGAA+AGG | + | chr1_2:73446665-73446684 | Msa0091290:intron | 35.0% | |
ATTTGTCCTGTCTGAATGAA+TGG | + | chr1_2:73446705-73446724 | Msa0091290:intron | 35.0% | |
! | ATTACAAACCAGCTGATTTC+AGG | - | chr1_2:73446752-73446771 | None:intergenic | 35.0% |
! | TTTTCCTCTGAATAGAAGGA+TGG | - | chr1_2:73446492-73446511 | None:intergenic | 35.0% |
GATAAACCTAAGTTTCATCC+CGG | + | chr1_2:73446550-73446569 | Msa0091290:CDS | 35.0% | |
GTTGCAATGGTAATCATGAT+AGG | + | chr1_2:73446587-73446606 | Msa0091290:intron | 35.0% | |
CTATCAATTTGAGTCCTGAA+AGG | + | chr1_2:73447246-73447265 | Msa0091290:intron | 35.0% | |
ATTTGTCCTATCTGAATGGT+AGG | + | chr1_2:73447286-73447305 | Msa0091290:intron | 35.0% | |
TAGTATCCTACCATTCAGAT+AGG | - | chr1_2:73447295-73447314 | None:intergenic | 35.0% | |
ATTCTGATACACATCTGACA+GGG | - | chr1_2:73447611-73447630 | None:intergenic | 35.0% | |
TATTCTGATACACATCTGAC+AGG | - | chr1_2:73447612-73447631 | None:intergenic | 35.0% | |
!! | CTGGTGTTATTATTGCATGT+GGG | - | chr1_2:73447655-73447674 | None:intergenic | 35.0% |
!! | TCTGGTGTTATTATTGCATG+TGG | - | chr1_2:73447656-73447675 | None:intergenic | 35.0% |
TAATAACACCAGAACCTGTA+AGG | + | chr1_2:73447663-73447682 | Msa0091290:CDS | 35.0% | |
AATAACACCAGAACCTGTAA+GGG | + | chr1_2:73447664-73447683 | Msa0091290:CDS | 35.0% | |
AATATTACCCTTACAGGTTC+TGG | - | chr1_2:73447674-73447693 | None:intergenic | 35.0% | |
! | GAAGATTTAACTTCTCCCAA+GGG | - | chr1_2:73447715-73447734 | None:intergenic | 35.0% |
! | AGAAGATTTAACTTCTCCCA+AGG | - | chr1_2:73447716-73447735 | None:intergenic | 35.0% |
ATTAGATGAAACCAACAGTG+AGG | + | chr1_2:73447876-73447895 | Msa0091290:CDS | 35.0% | |
!! | TTTTGGAAATTCCTCACTGT+TGG | - | chr1_2:73447890-73447909 | None:intergenic | 35.0% |
! | TACACATAATGATGATGCTG+GGG | - | chr1_2:73448135-73448154 | None:intergenic | 35.0% |
CATTCTTAGTCCTCTCAATT+GGG | - | chr1_2:73448170-73448189 | None:intergenic | 35.0% | |
TCATTCTTAGTCCTCTCAAT+TGG | - | chr1_2:73448171-73448190 | None:intergenic | 35.0% | |
AACTGTTCTCTGAATACTCT+TGG | + | chr1_2:73448335-73448354 | Msa0091290:intron | 35.0% | |
ACGGGATTTAACTAACAATG+TGG | - | chr1_2:73448671-73448690 | None:intergenic | 35.0% | |
TTCTTGACTCAAGAAGGAAA+GGG | + | chr1_2:73448787-73448806 | Msa0091290:CDS | 35.0% | |
ATTCAGGCCAAAAACATTTG+AGG | - | chr1_2:73449104-73449123 | None:intergenic | 35.0% | |
TTAGCCAACTCAATCACTTA+AGG | + | chr1_2:73449123-73449142 | Msa0091290:intron | 35.0% | |
!! | TTAGCCTTAAGTGATTGAGT+TGG | - | chr1_2:73449130-73449149 | None:intergenic | 35.0% |
AAAATCTTCAGGGATGAAAG+AGG | + | chr1_2:73449191-73449210 | Msa0091290:intron | 35.0% | |
AAATCTTCAGGGATGAAAGA+GGG | + | chr1_2:73449192-73449211 | Msa0091290:intron | 35.0% | |
TAAGAGAAAGATGGAGACTA+AGG | - | chr1_2:73449304-73449323 | None:intergenic | 35.0% | |
GAGTGAGATTAAGAGAAAGA+TGG | - | chr1_2:73449313-73449332 | None:intergenic | 35.0% | |
AAAGATGCAGAGAAAAGTGA+CGG | + | chr1_2:73449402-73449421 | Msa0091290:intron | 35.0% | |
! | CGTTTTGCATTCATCTTGTT+TGG | + | chr1_2:73449558-73449577 | Msa0091290:intron | 35.0% |
AATAGACATTCCTGTTGAAG+TGG | + | chr1_2:73449692-73449711 | Msa0091290:CDS | 35.0% | |
TTCTCACATGATAATAGTGG+CGG | - | chr1_2:73449728-73449747 | None:intergenic | 35.0% | |
! | TGTGAGAATTTGGTAGTCAT+AGG | + | chr1_2:73449740-73449759 | Msa0091290:intron | 35.0% |
ACACCGCCAAAAAAAATCAA+TGG | + | chr1_2:73449894-73449913 | Msa0091290:intron | 35.0% | |
!!! | CCTCCATTGATTTTTTTTGG+CGG | - | chr1_2:73449900-73449919 | None:intergenic | 35.0% |
TAAGGTATGTATAAGGGGAT+AGG | - | chr1_2:73450210-73450229 | None:intergenic | 35.0% | |
ATTAAATCTGGGTCACACAA+AGG | + | chr1_2:73450315-73450334 | Msa0091290:intron | 35.0% | |
GCACAAACATCATTAAGAAG+GGG | - | chr1_2:73450459-73450478 | None:intergenic | 35.0% | |
GGCACAAACATCATTAAGAA+GGG | - | chr1_2:73450460-73450479 | None:intergenic | 35.0% | |
AGGCACAAACATCATTAAGA+AGG | - | chr1_2:73450461-73450480 | None:intergenic | 35.0% | |
AGATTTGGCAAGTTTACTAG+AGG | - | chr1_2:73450488-73450507 | None:intergenic | 35.0% | |
CTAGTAAACTTGCCAAATCT+TGG | + | chr1_2:73450488-73450507 | Msa0091290:intron | 35.0% | |
GAAAAAATAGGCCCAAGATT+TGG | - | chr1_2:73450503-73450522 | None:intergenic | 35.0% | |
TACACATACTAAGAGGAATG+TGG | - | chr1_2:73450557-73450576 | None:intergenic | 35.0% | |
GGACATTTACACATACTAAG+AGG | - | chr1_2:73450564-73450583 | None:intergenic | 35.0% | |
GTCCGAAAAGAAAAAAGAAG+GGG | + | chr1_2:73450580-73450599 | Msa0091290:intron | 35.0% | |
AGACATCTTATATGCAAGTG+TGG | + | chr1_2:73451011-73451030 | Msa0091290:intron | 35.0% | |
GTTTGAACACGTGAAAAGAT+TGG | - | chr1_2:73451115-73451134 | None:intergenic | 35.0% | |
AGCTAAGATTCTCAATTCCT+AGG | + | chr1_2:73451283-73451302 | Msa0091290:intron | 35.0% | |
TAAACTTCATCTAGAGACCT+AGG | - | chr1_2:73451303-73451322 | None:intergenic | 35.0% | |
CTCTAGATGAAGTTTATGTG+AGG | + | chr1_2:73451307-73451326 | Msa0091290:intron | 35.0% | |
! | GAAGCATTTCAATGTTGTTG+TGG | + | chr1_2:73451404-73451423 | Msa0091290:CDS | 35.0% |
TGCCGTGATAAGAAACAAAA+AGG | + | chr1_2:73451437-73451456 | Msa0091290:CDS | 35.0% | |
AAATGTGATGTAAAAGAGCG+AGG | - | chr1_2:73451521-73451540 | None:intergenic | 35.0% | |
AGTTAGTGGAGTAGTTAAGT+TGG | - | chr1_2:73451718-73451737 | None:intergenic | 35.0% | |
!!! | TATTATTTTGAGACGGGTGA+AGG | + | chr1_2:73451837-73451856 | Msa0091290:intron | 35.0% |
GTAAGTTAGAAGTCTCTTGT+TGG | - | chr1_2:73451891-73451910 | None:intergenic | 35.0% | |
! | TTACAATGGTATCGAGAGTA+TGG | - | chr1_2:73452006-73452025 | None:intergenic | 35.0% |
CGATACCATTGTAAGAGTTA+TGG | + | chr1_2:73452012-73452031 | Msa0091290:intron | 35.0% | |
CTTCACCATAACTCTTACAA+TGG | - | chr1_2:73452020-73452039 | None:intergenic | 35.0% | |
! | TAATCTAGAGTTTGATTGGG+AGG | + | chr1_2:73452122-73452141 | Msa0091290:intron | 35.0% |
! | AACCCAAGTTTGATTTCTGA+TGG | - | chr1_2:73452175-73452194 | None:intergenic | 35.0% |
! | ATTTGGTGGATCAACACATT+GGG | + | chr1_2:73452251-73452270 | Msa0091290:intron | 35.0% |
!! | TTATATTTTGGGTGAAGACG+TGG | - | chr1_2:73452308-73452327 | None:intergenic | 35.0% |
ATATAGATGTGGAAACAGAG+AGG | - | chr1_2:73452986-73453005 | None:intergenic | 35.0% | |
! | TCGCAGTATCGAAAAATTAG+AGG | - | chr1_2:73453020-73453039 | None:intergenic | 35.0% |
CTGGCAAAATGTTTAATGTG+AGG | - | chr1_2:73453045-73453064 | None:intergenic | 35.0% | |
GGAAAAAATCTGAGGGTAAA+AGG | - | chr1_2:73453117-73453136 | None:intergenic | 35.0% | |
AATTGACAATGCTGAGATTG+TGG | + | chr1_2:73453304-73453323 | Msa0091290:intron | 35.0% | |
ATTGTGGAATCTCTTCCTTA+AGG | + | chr1_2:73453320-73453339 | Msa0091290:intron | 35.0% | |
!! | AACTTTGATTTGCAACGTTG+TGG | - | chr1_2:73453430-73453449 | None:intergenic | 35.0% |
! | CAAGTAGATTATTGCTGTTG+CGG | + | chr1_2:73453605-73453624 | Msa0091290:intron | 35.0% |
! | ATTATTGCTGTTGCGGTATT+TGG | + | chr1_2:73453612-73453631 | Msa0091290:intron | 35.0% |
!! | TTTTTAGGGATTGGATTGTC+GGG | + | chr1_2:73453676-73453695 | Msa0091290:intron | 35.0% |
TTAGTATCGCCAGTTTCTAT+TGG | + | chr1_2:73453715-73453734 | Msa0091290:CDS | 35.0% | |
TACTAATCCAAGGGCAATCA+AGG | + | chr1_2:73445771-73445790 | Msa0091290:CDS | 40.0% | |
TCTCCATCATGACAACTTAC+TGG | - | chr1_2:73446205-73446224 | None:intergenic | 40.0% | |
CTTGGTAGATATAGACAACC+AGG | + | chr1_2:73446246-73446265 | Msa0091290:CDS | 40.0% | |
AGTTGTCAGCTGATAAAACC+TGG | - | chr1_2:73446267-73446286 | None:intergenic | 40.0% | |
! | ACCTCCCAAGACTTTTAAAC+AGG | + | chr1_2:73446321-73446340 | Msa0091290:CDS | 40.0% |
TCCTGTTTAAAAGTCTTGGG+AGG | - | chr1_2:73446325-73446344 | None:intergenic | 40.0% | |
TGAAACCCTCTCAAATTTCC+AGG | + | chr1_2:73446350-73446369 | Msa0091290:CDS | 40.0% | |
TCTTGCCTGGAAATTTGAGA+GGG | - | chr1_2:73446358-73446377 | None:intergenic | 40.0% | |
ATCTTGCCTGGAAATTTGAG+AGG | - | chr1_2:73446359-73446378 | None:intergenic | 40.0% | |
AGATAGAAAGATCTATCCCG+GGG | + | chr1_2:73446420-73446439 | Msa0091290:CDS | 40.0% | |
TCTGTTTCGACAAGTTGCAA+TGG | + | chr1_2:73446574-73446593 | Msa0091290:CDS | 40.0% | |
AGAAAAACAGGAGACCTTTC+AGG | - | chr1_2:73446682-73446701 | None:intergenic | 40.0% | |
ATCCTACCATTCATTCAGAC+AGG | - | chr1_2:73446714-73446733 | None:intergenic | 40.0% | |
GAATGGTAGGATACTAGTAG+TGG | + | chr1_2:73446722-73446741 | Msa0091290:intron | 40.0% | |
!! | TGTCAGAACTGCTCACTTTT+TGG | - | chr1_2:73446823-73446842 | None:intergenic | 40.0% |
!! | TCCATTGGAAGCATTTAGTG+AGG | - | chr1_2:73447000-73447019 | None:intergenic | 40.0% |
AATGACCTGCAGATTTCCAT+TGG | - | chr1_2:73447015-73447034 | None:intergenic | 40.0% | |
TTAGCCATCCTTCTATTCAG+AGG | + | chr1_2:73447056-73447075 | Msa0091290:CDS | 40.0% | |
TCTGTTTCGACAAGTTGCAA+TGG | + | chr1_2:73446574-73446593 | Msa0091290:CDS | 40.0% | |
AGAAAAACAGGAGACCTTTC+AGG | - | chr1_2:73446682-73446701 | None:intergenic | 40.0% | |
GAATGGTAGGATACTAGTAG+TGG | + | chr1_2:73446722-73446741 | Msa0091290:intron | 40.0% | |
TGTCAGAATTGCTCACTTTC+TGG | - | chr1_2:73447399-73447418 | None:intergenic | 40.0% | |
!! | TATTGGTTCTTCTTCACCCT+TGG | + | chr1_2:73447696-73447715 | Msa0091290:CDS | 40.0% |
! | ATTGGTTCTTCTTCACCCTT+GGG | + | chr1_2:73447697-73447716 | Msa0091290:CDS | 40.0% |
ATCAAGGCAAACTCTTTCTG+AGG | + | chr1_2:73447786-73447805 | Msa0091290:CDS | 40.0% | |
TATTTCACTTGCTCGGATTG+CGG | + | chr1_2:73447957-73447976 | Msa0091290:CDS | 40.0% | |
GTGTTTGCTTACACTTCACA+AGG | + | chr1_2:73448060-73448079 | Msa0091290:CDS | 40.0% | |
TTTGACAGATTGCATGTCCA+TGG | + | chr1_2:73448101-73448120 | Msa0091290:CDS | 40.0% | |
AGATTGCATGTCCATGGTAA+AGG | + | chr1_2:73448107-73448126 | Msa0091290:CDS | 40.0% | |
ACCAAACCTGAATCATGCAA+GGG | + | chr1_2:73448192-73448211 | Msa0091290:CDS | 40.0% | |
! | GGAAGTTTATAAAGGAGTGC+TGG | + | chr1_2:73448226-73448245 | Msa0091290:CDS | 40.0% |
!! | AGTTTATAAAGGAGTGCTGG+AGG | + | chr1_2:73448229-73448248 | Msa0091290:CDS | 40.0% |
AGGTTTAAGCCGTAAATTGC+AGG | + | chr1_2:73448296-73448315 | Msa0091290:CDS | 40.0% | |
GTTCTTGACTCAAGAAGGAA+AGG | + | chr1_2:73448786-73448805 | Msa0091290:CDS | 40.0% | |
AACACTAGAAGATTTGCCCA+AGG | + | chr1_2:73448822-73448841 | Msa0091290:CDS | 40.0% | |
ACACTAGAAGATTTGCCCAA+GGG | + | chr1_2:73448823-73448842 | Msa0091290:CDS | 40.0% | |
TCCTTTGTCTGTGAATATGC+AGG | + | chr1_2:73448847-73448866 | Msa0091290:CDS | 40.0% | |
CCTTTGTCTGTGAATATGCA+GGG | + | chr1_2:73448848-73448867 | Msa0091290:CDS | 40.0% | |
CTTTGTCTGTGAATATGCAG+GGG | + | chr1_2:73448849-73448868 | Msa0091290:CDS | 40.0% | |
TGTAACACTTGATGCAGACT+GGG | + | chr1_2:73448942-73448961 | Msa0091290:CDS | 40.0% | |
AGTGGGATTAAAGGATGAAG+AGG | + | chr1_2:73448972-73448991 | Msa0091290:CDS | 40.0% | |
TGCTTGGATGCAACACATAA+TGG | + | chr1_2:73449000-73449019 | Msa0091290:CDS | 40.0% | |
GCTTGGATGCAACACATAAT+GGG | + | chr1_2:73449001-73449020 | Msa0091290:CDS | 40.0% | |
!! | GTGATTGAGTTGGCTAATTC+AGG | - | chr1_2:73449120-73449139 | None:intergenic | 40.0% |
TGCAAAACGGTACAAGTGAT+GGG | - | chr1_2:73449547-73449566 | None:intergenic | 40.0% | |
ATGCAAAACGGTACAAGTGA+TGG | - | chr1_2:73449548-73449567 | None:intergenic | 40.0% | |
! | ACACAACAGCAAAAGCGTAA+AGG | - | chr1_2:73449626-73449645 | None:intergenic | 40.0% |
!!! | TGATTTTTTTTGGCGGTGTC+CGG | - | chr1_2:73449893-73449912 | None:intergenic | 40.0% |
CCGCCAAAAAAAATCAATGG+AGG | + | chr1_2:73449897-73449916 | Msa0091290:intron | 40.0% | |
AAATCAATGGAGGACAGTGA+AGG | + | chr1_2:73449907-73449926 | Msa0091290:intron | 40.0% | |
AAGGGGAACTATTGGAATGT+AGG | - | chr1_2:73450238-73450257 | None:intergenic | 40.0% | |
TGTCACCGTGACATTAAATC+TGG | + | chr1_2:73450303-73450322 | Msa0091290:intron | 40.0% | |
GTCACCGTGACATTAAATCT+GGG | + | chr1_2:73450304-73450323 | Msa0091290:intron | 40.0% | |
GTGACCCAGATTTAATGTCA+CGG | - | chr1_2:73450409-73450428 | None:intergenic | 40.0% | |
CACAACACATACAACACATC+TGG | - | chr1_2:73450357-73450376 | None:intergenic | 40.0% | |
GATGTGTTGTATGTGTTGTG+TGG | + | chr1_2:73450357-73450376 | Msa0091290:intron | 40.0% | |
CACATTGTCACACAACATCT+GGG | - | chr1_2:73450383-73450402 | None:intergenic | 40.0% | |
ACACATTGTCACACAACATC+TGG | - | chr1_2:73450384-73450403 | None:intergenic | 40.0% | |
GTGACCCAGATTTAATGTCA+CGG | + | chr1_2:73450409-73450428 | Msa0091290:intron | 40.0% | |
GTCACCGTGACATTAAATCT+GGG | - | chr1_2:73450304-73450323 | None:intergenic | 40.0% | |
TGTCACCGTGACATTAAATC+TGG | - | chr1_2:73450303-73450322 | None:intergenic | 40.0% | |
!! | ATTAAGAAGGGGAAGCACTT+GGG | - | chr1_2:73450448-73450467 | None:intergenic | 40.0% |
TTGGCAAGTTTACTAGAGGA+GGG | - | chr1_2:73450484-73450503 | None:intergenic | 40.0% | |
TTTGGCAAGTTTACTAGAGG+AGG | - | chr1_2:73450485-73450504 | None:intergenic | 40.0% | |
! | TTTTCACATTAGACAACGCC+TGG | + | chr1_2:73450518-73450537 | Msa0091290:intron | 40.0% |
ACATACTAAGAGGAATGTGG+AGG | - | chr1_2:73450554-73450573 | None:intergenic | 40.0% | |
ACCAACAGAATGCACAATCA+TGG | + | chr1_2:73450831-73450850 | Msa0091290:intron | 40.0% | |
TCCATGATTGTGCATTCTGT+TGG | - | chr1_2:73450835-73450854 | None:intergenic | 40.0% | |
TACAATTCCCTCAGAATTGC+AGG | - | chr1_2:73450984-73451003 | None:intergenic | 40.0% | |
ATGCTTCAATAGGATGGGTA+TGG | - | chr1_2:73451391-73451410 | None:intergenic | 40.0% | |
TCCTCAAATGTGAGACTCTA+TGG | + | chr1_2:73451932-73451951 | Msa0091290:intron | 40.0% | |
!! | TTGAACAACCTTGGTGTCTA+AGG | - | chr1_2:73452043-73452062 | None:intergenic | 40.0% |
TCTTAACTCCACGGTTCTTT+GGG | + | chr1_2:73452083-73452102 | Msa0091290:intron | 40.0% | |
!! | GATTTGGTGGATCAACACAT+TGG | + | chr1_2:73452250-73452269 | Msa0091290:intron | 40.0% |
! | GTTTTCAAAACTCACTCGTG+TGG | - | chr1_2:73452286-73452305 | None:intergenic | 40.0% |
TCTGAGGGTAAAAGGAGTAA+AGG | - | chr1_2:73453109-73453128 | None:intergenic | 40.0% | |
CATGGAGGGAAAAAATCTGA+GGG | - | chr1_2:73453124-73453143 | None:intergenic | 40.0% | |
ACATGGAGGGAAAAAATCTG+AGG | - | chr1_2:73453125-73453144 | None:intergenic | 40.0% | |
AGAGTTTCGAAGAACATGGA+GGG | - | chr1_2:73453138-73453157 | None:intergenic | 40.0% | |
TTCGAGAGTTTCGAAGAACA+TGG | - | chr1_2:73453142-73453161 | None:intergenic | 40.0% | |
AAGTGACAAACACCACCTTA+AGG | - | chr1_2:73453338-73453357 | None:intergenic | 40.0% | |
CCATTAGATTCAACCTCACT+TGG | - | chr1_2:73453391-73453410 | None:intergenic | 40.0% | |
CCAAGTGAGGTTGAATCTAA+TGG | + | chr1_2:73453388-73453407 | Msa0091290:intron | 40.0% | |
!! | TTTTAGGGATTGGATTGTCG+GGG | + | chr1_2:73453677-73453696 | Msa0091290:intron | 40.0% |
CCAGTTTCTATTGGCCAAAA+GGG | + | chr1_2:73453724-73453743 | Msa0091290:CDS | 40.0% | |
! | TTGGATTCTTGAAGCCCTTT+TGG | - | chr1_2:73453741-73453760 | None:intergenic | 40.0% |
AAAAGGGCTTCAAGAATCCA+AGG | + | chr1_2:73453740-73453759 | Msa0091290:CDS | 40.0% | |
TGCACAGAATGTGAAGGTAA+AGG | + | chr1_2:73453787-73453806 | Msa0091290:CDS | 40.0% | |
ACAGAATGTGAAGGTAAAGG+AGG | + | chr1_2:73453790-73453809 | Msa0091290:CDS | 40.0% | |
CAGAATGTGAAGGTAAAGGA+GGG | + | chr1_2:73453791-73453810 | Msa0091290:CDS | 40.0% | |
AGAATGTGAAGGTAAAGGAG+GGG | + | chr1_2:73453792-73453811 | Msa0091290:CDS | 40.0% | |
!! | GATTGCCCTTGGATTAGTAG+TGG | - | chr1_2:73445770-73445789 | None:intergenic | 45.0% |
CAAGGCCCTTAATGCTATGA+AGG | + | chr1_2:73445789-73445808 | Msa0091290:CDS | 45.0% | |
GCTCCAGTAAGTTGTCATGA+TGG | + | chr1_2:73446199-73446218 | Msa0091290:CDS | 45.0% | |
GTGTTGTCTGTAGAAGACAC+TGG | + | chr1_2:73446295-73446314 | Msa0091290:CDS | 45.0% | |
TGTGGGATTCATATCTTGCC+TGG | - | chr1_2:73446371-73446390 | None:intergenic | 45.0% | |
CTCTGAATAGAAGGATGGCT+AGG | - | chr1_2:73446487-73446506 | None:intergenic | 45.0% | |
CTAGCCATCCTTCTATTCAG+AGG | + | chr1_2:73446485-73446504 | Msa0091290:CDS | 45.0% | |
ACAGATCCGGGATGAAACTT+AGG | - | chr1_2:73446559-73446578 | None:intergenic | 45.0% | |
CAACTTGTCGAAACAGATCC+GGG | - | chr1_2:73446571-73446590 | None:intergenic | 45.0% | |
GCAACTTGTCGAAACAGATC+CGG | - | chr1_2:73446572-73446591 | None:intergenic | 45.0% | |
GTCCTGTCTGAATGAATGGT+AGG | + | chr1_2:73446709-73446728 | Msa0091290:intron | 45.0% | |
GCCTCACTAAATGCTTCCAA+TGG | + | chr1_2:73446996-73447015 | Msa0091290:intron | 45.0% | |
TGCTTCCAATGGAAATCTGC+AGG | + | chr1_2:73447007-73447026 | Msa0091290:intron | 45.0% | |
GGATGGCTAAGTCCATCAAT+TGG | - | chr1_2:73447046-73447065 | None:intergenic | 45.0% | |
ACAGATCCGGGATGAAACTT+AGG | - | chr1_2:73446559-73446578 | None:intergenic | 45.0% | |
CAACTTGTCGAAACAGATCC+GGG | - | chr1_2:73446571-73446590 | None:intergenic | 45.0% | |
GCAACTTGTCGAAACAGATC+CGG | - | chr1_2:73446572-73446591 | None:intergenic | 45.0% | |
GTGGAGATCCTGAAATCAGT+TGG | + | chr1_2:73447318-73447337 | Msa0091290:intron | 45.0% | |
GGCTCACTAAATGCTTCCAA+TGG | + | chr1_2:73447568-73447587 | Msa0091290:intron | 45.0% | |
TGTGATGCTGCATTAAGGAC+TGG | + | chr1_2:73447742-73447761 | Msa0091290:CDS | 45.0% | |
AAGACAGTCGCCTGAACAAT+CGG | - | chr1_2:73447998-73448017 | None:intergenic | 45.0% | |
! | GTTTCTTGAGAGCATGCACA+AGG | - | chr1_2:73448033-73448052 | None:intergenic | 45.0% |
TGTGCATGCTCTCAAGAAAC+TGG | + | chr1_2:73448033-73448052 | Msa0091290:CDS | 45.0% | |
!! | GTAAAGAGTGCCCAATTGAG+AGG | + | chr1_2:73448157-73448176 | Msa0091290:CDS | 45.0% |
GACCAAACCTGAATCATGCA+AGG | + | chr1_2:73448191-73448210 | Msa0091290:CDS | 45.0% | |
! | TCCCTTGCATGATTCAGGTT+TGG | - | chr1_2:73448196-73448215 | None:intergenic | 45.0% |
AGATGTCCCTTGCATGATTC+AGG | - | chr1_2:73448201-73448220 | None:intergenic | 45.0% | |
CATGCAAGGGACATCTAGTT+AGG | + | chr1_2:73448205-73448224 | Msa0091290:CDS | 45.0% | |
GTGACATGCAGTGTGGAAAT+CGG | + | chr1_2:73448262-73448281 | Msa0091290:CDS | 45.0% | |
TGACATGCAGTGTGGAAATC+GGG | + | chr1_2:73448263-73448282 | Msa0091290:CDS | 45.0% | |
CAGGTGTTCTTGACTCAAGA+AGG | + | chr1_2:73448781-73448800 | Msa0091290:intron | 45.0% | |
TCACAGACAAAGGATCCCTT+GGG | - | chr1_2:73448841-73448860 | None:intergenic | 45.0% | |
TTCACAGACAAAGGATCCCT+TGG | - | chr1_2:73448842-73448861 | None:intergenic | 45.0% | |
CCCTGCATATTCACAGACAA+AGG | - | chr1_2:73448851-73448870 | None:intergenic | 45.0% | |
GACAGGATTGTGCATAGTAC+CGG | + | chr1_2:73448898-73448917 | Msa0091290:CDS | 45.0% | |
CAGTCTGCATCAAGTGTTAC+AGG | - | chr1_2:73448943-73448962 | None:intergenic | 45.0% | |
CTGTAACACTTGATGCAGAC+TGG | + | chr1_2:73448941-73448960 | Msa0091290:CDS | 45.0% | |
GTAACACTTGATGCAGACTG+GGG | + | chr1_2:73448943-73448962 | Msa0091290:CDS | 45.0% | |
!! | GGATGAAGAGGCATTATGCT+TGG | + | chr1_2:73448984-73449003 | Msa0091290:CDS | 45.0% |
ACATGATAATAGTGGCGGTC+AGG | - | chr1_2:73449723-73449742 | None:intergenic | 45.0% | |
AAGATCCGGGATTTAAACCC+CGG | + | chr1_2:73449871-73449890 | Msa0091290:intron | 45.0% | |
!!! | ATTTTTTTTGGCGGTGTCCG+GGG | - | chr1_2:73449891-73449910 | None:intergenic | 45.0% |
!!! | GATTTTTTTTGGCGGTGTCC+GGG | - | chr1_2:73449892-73449911 | None:intergenic | 45.0% |
! | CAAAGATGTGAGAGCATACG+AGG | + | chr1_2:73449997-73450016 | Msa0091290:CDS | 45.0% |
!! | TTGTTCTGAGGAACTTACCC+AGG | - | chr1_2:73450029-73450048 | None:intergenic | 45.0% |
CAGCTCAGCTCCTTCTTAAT+GGG | + | chr1_2:73450260-73450279 | Msa0091290:intron | 45.0% | |
!! | CACAAAGGTGTTGTGTTGTG+TGG | + | chr1_2:73450330-73450349 | Msa0091290:intron | 45.0% |
!! | CATTAAGAAGGGGAAGCACT+TGG | - | chr1_2:73450449-73450468 | None:intergenic | 45.0% |
ATGCAAAGCCTGCAATTCTG+AGG | + | chr1_2:73450973-73450992 | Msa0091290:intron | 45.0% | |
TGCAAAGCCTGCAATTCTGA+GGG | + | chr1_2:73450974-73450993 | Msa0091290:intron | 45.0% | |
GCCATAGAGTCTCACATTTG+AGG | - | chr1_2:73451936-73451955 | None:intergenic | 45.0% | |
!! | AGAGTATGGTTCGACTTGGT+GGG | - | chr1_2:73451992-73452011 | None:intergenic | 45.0% |
! | ATCGAGAGTATGGTTCGACT+TGG | - | chr1_2:73451996-73452015 | None:intergenic | 45.0% |
GTCTTAACTCCACGGTTCTT+TGG | + | chr1_2:73452082-73452101 | Msa0091290:intron | 45.0% | |
CTTAACTCCACGGTTCTTTG+GGG | + | chr1_2:73452084-73452103 | Msa0091290:intron | 45.0% | |
CGTAAACGATTCGTCCTAAG+AGG | + | chr1_2:73452197-73452216 | Msa0091290:intron | 45.0% | |
GTGGTTAACGATCACCTCTT+AGG | - | chr1_2:73452214-73452233 | None:intergenic | 45.0% | |
TACCAACTGAGCTTAGCTCA+CGG | - | chr1_2:73452697-73452716 | None:intergenic | 45.0% | |
ATGTGGAAACAGAGAGGAGT+GGG | - | chr1_2:73452980-73452999 | None:intergenic | 45.0% | |
GAGAGTTTCGAAGAACATGG+AGG | - | chr1_2:73453139-73453158 | None:intergenic | 45.0% | |
GTGGAATCTCTTCCTTAAGG+TGG | + | chr1_2:73453323-73453342 | Msa0091290:intron | 45.0% | |
GCCAGTTTCTATTGGCCAAA+AGG | + | chr1_2:73453723-73453742 | Msa0091290:CDS | 45.0% | |
! | CCCTTTTGGCCAATAGAAAC+TGG | - | chr1_2:73453727-73453746 | None:intergenic | 45.0% |
ACATTCTGTGCAGTAGGATG+TGG | - | chr1_2:73453779-73453798 | None:intergenic | 45.0% | |
TCCTACTGCACAGAATGTGA+AGG | + | chr1_2:73453781-73453800 | Msa0091290:CDS | 45.0% | |
ACCTTCACATTCTGTGCAGT+AGG | - | chr1_2:73453785-73453804 | None:intergenic | 45.0% | |
TTAAGGGCCTTGATTGCCCT+TGG | - | chr1_2:73445781-73445800 | None:intergenic | 50.0% | |
GAAGGACTTAGGAATCTCGG+AGG | + | chr1_2:73445807-73445826 | Msa0091290:CDS | 50.0% | |
AATGCCTGCGAACTGGTTGT+GGG | - | chr1_2:73446388-73446407 | None:intergenic | 50.0% | |
AACCAGTTCGCAGGCATTCA+TGG | + | chr1_2:73446390-73446409 | Msa0091290:CDS | 50.0% | |
ATCCATGAATGCCTGCGAAC+TGG | - | chr1_2:73446395-73446414 | None:intergenic | 50.0% | |
GGATGGCTAGGTCCATCAAT+TGG | - | chr1_2:73446475-73446494 | None:intergenic | 50.0% | |
GTGGAGATCCTGAAATCAGC+TGG | + | chr1_2:73446741-73446760 | Msa0091290:intron | 50.0% | |
GATTGCTGCTCCGATTGTTC+AGG | + | chr1_2:73447985-73448004 | Msa0091290:CDS | 50.0% | |
GCATGCTCTCAAGAAACTGG+TGG | + | chr1_2:73448036-73448055 | Msa0091290:CDS | 50.0% | |
ATGCTGGGGTTCCTTTACCA+TGG | - | chr1_2:73448121-73448140 | None:intergenic | 50.0% | |
!! | AAGGAGTGCTGGAGGAAATG+TGG | + | chr1_2:73448237-73448256 | Msa0091290:CDS | 50.0% |
TGTGGATGTGACATGCAGTG+TGG | + | chr1_2:73448255-73448274 | Msa0091290:CDS | 50.0% | |
TGACTCAAGAAGGAAAGGGC+TGG | + | chr1_2:73448791-73448810 | Msa0091290:CDS | 50.0% | |
GACTCAAGAAGGAAAGGGCT+GGG | + | chr1_2:73448792-73448811 | Msa0091290:CDS | 50.0% | |
ACTCAAGAAGGAAAGGGCTG+GGG | + | chr1_2:73448793-73448812 | Msa0091290:CDS | 50.0% | |
ACTTGATGCAGACTGGGGTT+CGG | + | chr1_2:73448948-73448967 | Msa0091290:CDS | 50.0% | |
GGGTTCGGAAGTGGGATTAA+AGG | + | chr1_2:73448963-73448982 | Msa0091290:CDS | 50.0% | |
TCAGGTGTCTCCACTTCAAC+AGG | - | chr1_2:73449705-73449724 | None:intergenic | 50.0% | |
AGCATACGAGGAGTTGACCT+GGG | + | chr1_2:73450009-73450028 | Msa0091290:CDS | 50.0% | |
CCATTAAGAAGGAGCTGAGC+TGG | - | chr1_2:73450262-73450281 | None:intergenic | 50.0% | |
CCAGCTCAGCTCCTTCTTAA+TGG | + | chr1_2:73450259-73450278 | Msa0091290:intron | 50.0% | |
GCAAGTTTACTAGAGGAGGG+AGG | - | chr1_2:73450481-73450500 | None:intergenic | 50.0% | |
AGGAATGTGGAGGCTGACAT+TGG | - | chr1_2:73450544-73450563 | None:intergenic | 50.0% | |
GCGGAAGTGGTTCTTGGTAT+TGG | - | chr1_2:73451965-73451984 | None:intergenic | 50.0% | |
!! | GAGAGTATGGTTCGACTTGG+TGG | - | chr1_2:73451993-73452012 | None:intergenic | 50.0% |
TGGTGAAGCCTTAGACACCA+AGG | + | chr1_2:73452032-73452051 | Msa0091290:intron | 50.0% | |
TTCCGTGAGCTAAGCTCAGT+TGG | + | chr1_2:73452692-73452711 | Msa0091290:intron | 50.0% | |
GATGTGGAAACAGAGAGGAG+TGG | - | chr1_2:73452981-73453000 | None:intergenic | 50.0% | |
GCGGTATTTGGCTGCCATAT+AGG | + | chr1_2:73453624-73453643 | Msa0091290:intron | 50.0% | |
AGGGCTTCAAGAATCCAAGG+AGG | + | chr1_2:73453743-73453762 | Msa0091290:CDS | 50.0% | |
TCTGTGCAGTAGGATGTGGT+GGG | - | chr1_2:73453775-73453794 | None:intergenic | 50.0% | |
TTCTGTGCAGTAGGATGTGG+TGG | - | chr1_2:73453776-73453795 | None:intergenic | 50.0% | |
CTTAGGAATCTCGGAGGTCG+AGG | + | chr1_2:73445813-73445832 | Msa0091290:CDS | 55.0% | |
GAATCCCACAACCAGTTCGC+AGG | + | chr1_2:73446381-73446400 | Msa0091290:CDS | 55.0% | |
GAATGCCTGCGAACTGGTTG+TGG | - | chr1_2:73446389-73446408 | None:intergenic | 55.0% | |
ACTTGCTCGGATTGCGGATG+AGG | + | chr1_2:73447963-73447982 | Msa0091290:CDS | 55.0% | |
GGAAATCGGGTAGTGCAACG+AGG | + | chr1_2:73448276-73448295 | Msa0091290:CDS | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | - | chr1_2:73449828-73449847 | None:intergenic | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | + | chr1_2:73449825-73449844 | Msa0091290:intron | 55.0% | |
GGTGTCCGGGGTTTAAATCC+CGG | - | chr1_2:73449879-73449898 | None:intergenic | 55.0% | |
GAGCATACGAGGAGTTGACC+TGG | + | chr1_2:73450008-73450027 | Msa0091290:CDS | 55.0% | |
GAGCTGGCAAGGGGAACTAT+TGG | - | chr1_2:73450246-73450265 | None:intergenic | 55.0% | |
AGAAGGAGCTGAGCTGGCAA+GGG | - | chr1_2:73450256-73450275 | None:intergenic | 55.0% | |
AAGAAGGAGCTGAGCTGGCA+AGG | - | chr1_2:73450257-73450276 | None:intergenic | 55.0% | |
!! | GTATGGTTCGACTTGGTGGG+AGG | - | chr1_2:73451989-73452008 | None:intergenic | 55.0% |
CACTCTTCCCCAAAGAACCG+TGG | - | chr1_2:73452094-73452113 | None:intergenic | 55.0% | |
GTGAAGGTAAAGGAGGGGAG+AGG | + | chr1_2:73453797-73453816 | Msa0091290:CDS | 55.0% | |
ACCTGCAGATGATGCTGCCC+CGG | - | chr1_2:73446440-73446459 | None:intergenic | 60.0% | |
TGCAGACTGGGGTTCGGAAG+TGG | + | chr1_2:73448954-73448973 | Msa0091290:CDS | 60.0% | |
GCAGACTGGGGTTCGGAAGT+GGG | + | chr1_2:73448955-73448974 | Msa0091290:CDS | 60.0% | |
GAAGGAGCTGAGCTGGCAAG+GGG | - | chr1_2:73450255-73450274 | None:intergenic | 60.0% | |
TGTGGAGGCTGACATTGGCC+AGG | - | chr1_2:73450539-73450558 | None:intergenic | 60.0% | |
GGAGGAGCGGAAGTGGTTCT+TGG | - | chr1_2:73451971-73451990 | None:intergenic | 60.0% | |
!! | GTTCGACTTGGTGGGAGGAG+CGG | - | chr1_2:73451984-73452003 | None:intergenic | 60.0% |
! | GTGGTGGGAGATGACCTCCT+TGG | - | chr1_2:73453760-73453779 | None:intergenic | 60.0% |
AGGTAAAGGAGGGGAGAGGC+TGG | + | chr1_2:73453801-73453820 | Msa0091290:CDS | 60.0% | |
GGTAAAGGAGGGGAGAGGCT+GGG | + | chr1_2:73453802-73453821 | Msa0091290:CDS | 60.0% | |
CTCGGAGGTCGAGGTGACAC+CGG | + | chr1_2:73445822-73445841 | Msa0091290:CDS | 65.0% | |
CCTGCAGATGATGCTGCCCC+GGG | - | chr1_2:73446439-73446458 | None:intergenic | 65.0% | |
CTTGGTGGGAGGAGCGGAAG+TGG | - | chr1_2:73451978-73451997 | None:intergenic | 65.0% | |
CCCGGGGCAGCATCATCTGC+AGG | + | chr1_2:73446436-73446455 | Msa0091290:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 73445763 | 73453828 | 73445763 | ID=Msa0091290;Name=Msa0091290 |
chr1_2 | mRNA | 73445763 | 73453828 | 73445763 | ID=Msa0091290-mRNA-1;Parent=Msa0091290;Name=Msa0091290-mRNA-1;_AED=0.12;_eAED=0.16;_QI=0|0.37|0.33|0.88|1|1|9|0|714 |
chr1_2 | exon | 73445763 | 73445975 | 73445763 | ID=Msa0091290-mRNA-1:exon:25691;Parent=Msa0091290-mRNA-1 |
chr1_2 | exon | 73446175 | 73446595 | 73446175 | ID=Msa0091290-mRNA-1:exon:25692;Parent=Msa0091290-mRNA-1 |
chr1_2 | exon | 73447029 | 73447166 | 73447029 | ID=Msa0091290-mRNA-1:exon:25693;Parent=Msa0091290-mRNA-1 |
chr1_2 | exon | 73447569 | 73448317 | 73447569 | ID=Msa0091290-mRNA-1:exon:25694;Parent=Msa0091290-mRNA-1 |
chr1_2 | exon | 73448784 | 73449049 | 73448784 | ID=Msa0091290-mRNA-1:exon:25695;Parent=Msa0091290-mRNA-1 |
chr1_2 | exon | 73449674 | 73449740 | 73449674 | ID=Msa0091290-mRNA-1:exon:25696;Parent=Msa0091290-mRNA-1 |
chr1_2 | exon | 73449980 | 73450030 | 73449980 | ID=Msa0091290-mRNA-1:exon:25697;Parent=Msa0091290-mRNA-1 |
chr1_2 | exon | 73451365 | 73451458 | 73451365 | ID=Msa0091290-mRNA-1:exon:25698;Parent=Msa0091290-mRNA-1 |
chr1_2 | exon | 73453683 | 73453828 | 73453683 | ID=Msa0091290-mRNA-1:exon:25699;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73445763 | 73445975 | 73445763 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73446175 | 73446595 | 73446175 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73447029 | 73447166 | 73447029 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73447569 | 73448317 | 73447569 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73448784 | 73449049 | 73448784 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73449674 | 73449740 | 73449674 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73449980 | 73450030 | 73449980 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73451365 | 73451458 | 73451365 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
chr1_2 | CDS | 73453683 | 73453828 | 73453683 | ID=Msa0091290-mRNA-1:cds;Parent=Msa0091290-mRNA-1 |
Gene Sequence |
Protein sequence |