AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0172100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172100 MtrunA17_Chr1g0190311 89.238 669 52 3 3 671 2 650 0.0 1220
Msa0172100 MtrunA17_Chr8g0392541 86.824 296 19 2 259 553 29 305 1.30e-178 511
Msa0172100 MtrunA17_Chr1g0183321 59.639 332 129 5 336 665 418 746 6.92e-140 428
Msa0172100 MtrunA17_Chr7g0262001 56.707 328 139 2 338 665 378 702 1.88e-129 400
Msa0172100 MtrunA17_Chr3g0080761 27.811 338 171 10 346 661 374 660 2.47e-31 130
Msa0172100 MtrunA17_Chr8g0354821 27.083 336 173 9 346 661 401 684 1.06e-30 128
Msa0172100 MtrunA17_Chr7g0255181 28.221 326 166 10 346 661 434 701 2.27e-30 127
Msa0172100 MtrunA17_Chr5g0403241 38.710 186 106 6 479 663 1327 1505 6.54e-28 120
Msa0172100 MtrunA17_Chr5g0399801 28.529 340 154 12 346 660 809 1084 1.30e-26 116
Msa0172100 MtrunA17_Chr8g0373821 38.798 183 101 6 479 660 361 533 1.37e-26 114
Msa0172100 MtrunA17_Chr4g0003501 28.097 331 165 10 346 660 677 950 7.39e-26 114
Msa0172100 MtrunA17_Chr4g0075321 37.766 188 105 6 479 663 884 1062 1.74e-25 112
Msa0172100 MtrunA17_Chr6g0476111 34.112 214 115 7 473 663 482 692 5.06e-24 107
Msa0172100 MtrunA17_Chr4g0003511 27.327 333 167 11 346 660 772 1047 5.99e-24 108
Msa0172100 MtrunA17_Chr6g0476121 28.280 343 167 12 347 663 352 641 7.97e-24 106
Msa0172100 MtrunA17_Chr7g0252211 32.394 213 120 8 473 663 545 755 2.13e-22 102
Msa0172100 MtrunA17_Chr1g0170651 28.527 319 154 12 346 660 293 541 1.55e-19 93.2
Msa0172100 MtrunA17_Chr6g0460921 34.969 163 95 3 481 638 241 397 1.31e-18 89.0
Msa0172100 MtrunA17_Chr8g0368901 25.155 322 160 11 338 639 497 757 1.04e-17 87.8
Msa0172100 MtrunA17_Chr3g0094881 24.919 309 163 10 348 640 369 624 1.15e-17 87.4
Msa0172100 MtrunA17_Chr7g0232811 32.039 206 107 8 486 660 331 534 1.20e-17 87.0
Msa0172100 MtrunA17_Chr1g0163041 31.034 203 118 7 454 639 368 565 1.93e-17 86.3
Msa0172100 MtrunA17_Chr1g0163051 26.198 313 160 12 348 645 396 652 3.68e-17 85.9
Msa0172100 MtrunA17_Chr8g0368911 24.534 322 142 10 348 639 500 750 3.42e-16 82.8
Msa0172100 MtrunA17_Chr7g0232841 31.731 208 106 10 486 660 319 523 1.41e-15 80.5
Msa0172100 MtrunA17_Chr7g0232981 30.208 192 115 6 486 660 322 511 2.64e-15 79.3
Msa0172100 MtrunA17_Chr1g0201311 29.508 183 90 7 487 660 67 219 1.12e-13 73.9
Msa0172100 MtrunA17_Chr3g0125251 32.804 189 104 8 475 661 1294 1461 1.32e-13 75.1
Msa0172100 MtrunA17_Chr1g0201621 28.962 183 91 7 487 660 67 219 3.54e-13 72.4
Msa0172100 MtrunA17_Chr2g0305371 29.348 184 96 9 483 661 314 468 4.24e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172100 AT3G04380.1 66.465 331 109 2 338 667 135 464 5.15e-168 492
Msa0172100 AT3G04380.3 66.465 331 109 2 338 667 119 448 6.79e-168 491
Msa0172100 AT3G04380.2 66.465 331 109 2 338 667 108 437 8.18e-168 490
Msa0172100 AT3G04380.4 66.465 331 109 2 338 667 135 464 1.13e-167 491
Msa0172100 AT3G04380.6 66.465 331 109 2 338 667 108 437 2.02e-167 489
Msa0172100 AT3G04380.5 66.465 331 109 2 338 667 92 421 2.25e-167 488
Msa0172100 AT5G43990.16 38.407 703 369 17 10 669 9 690 4.28e-140 427
Msa0172100 AT5G43990.5 38.407 703 369 17 10 669 9 690 4.28e-140 427
Msa0172100 AT5G43990.17 38.407 703 369 17 10 669 9 690 4.28e-140 427
Msa0172100 AT5G43990.14 38.407 703 369 17 10 669 9 690 4.28e-140 427
Msa0172100 AT5G43990.15 38.407 703 369 17 10 669 32 713 7.38e-140 427
Msa0172100 AT5G43990.10 38.407 703 369 17 10 669 32 713 7.38e-140 427
Msa0172100 AT5G43990.8 54.328 335 147 2 335 669 313 641 6.07e-122 379
Msa0172100 AT5G43990.12 54.328 335 147 2 335 669 313 641 6.07e-122 379
Msa0172100 AT5G43990.6 54.328 335 147 2 335 669 313 641 6.07e-122 379
Msa0172100 AT5G43990.13 54.328 335 147 2 335 669 313 641 6.07e-122 379
Msa0172100 AT5G43990.7 54.328 335 147 2 335 669 293 621 7.49e-122 378
Msa0172100 AT5G43990.3 54.328 335 147 2 335 669 382 710 3.10e-121 379
Msa0172100 AT5G43990.3 41.593 113 58 2 10 119 9 116 1.32e-14 78.2
Msa0172100 AT5G43990.11 54.328 335 147 2 335 669 382 710 3.10e-121 379
Msa0172100 AT5G43990.11 41.593 113 58 2 10 119 9 116 1.32e-14 78.2
Msa0172100 AT5G43990.1 54.328 335 147 2 335 669 382 710 3.10e-121 379
Msa0172100 AT5G43990.1 41.593 113 58 2 10 119 9 116 1.32e-14 78.2
Msa0172100 AT5G43990.4 54.328 335 147 2 335 669 382 710 3.10e-121 379
Msa0172100 AT5G43990.4 41.593 113 58 2 10 119 9 116 1.32e-14 78.2
Msa0172100 AT5G43990.9 54.328 335 147 2 335 669 405 733 4.28e-121 379
Msa0172100 AT5G43990.9 41.593 113 58 2 10 119 32 139 1.25e-14 78.2
Msa0172100 AT5G43990.2 54.328 335 147 2 335 669 405 733 4.28e-121 379
Msa0172100 AT5G43990.2 41.593 113 58 2 10 119 32 139 1.25e-14 78.2
Msa0172100 AT1G04050.3 52.410 332 153 2 335 665 292 619 4.14e-116 363
Msa0172100 AT1G04050.2 52.410 332 153 2 335 665 396 723 2.46e-115 364
Msa0172100 AT1G04050.1 52.410 332 153 2 335 665 396 723 2.46e-115 364
Msa0172100 AT5G04940.2 27.381 336 169 10 346 661 386 666 3.35e-29 124
Msa0172100 AT5G04940.1 27.381 336 169 10 346 661 386 666 3.35e-29 124
Msa0172100 AT2G23740.3 42.857 161 86 5 480 638 1200 1356 4.96e-28 121
Msa0172100 AT2G23740.6 42.857 161 86 5 480 638 1200 1356 4.96e-28 121
Msa0172100 AT2G23740.2 42.857 161 86 5 480 638 1200 1356 4.96e-28 121
Msa0172100 AT2G23740.1 42.857 161 86 5 480 638 1193 1349 5.83e-28 121
Msa0172100 AT1G73100.1 28.012 332 173 10 346 661 384 665 3.57e-26 114
Msa0172100 AT2G22740.2 28.409 352 171 13 337 663 493 788 4.37e-25 111
Msa0172100 AT2G22740.1 28.409 352 171 13 337 663 493 788 4.37e-25 111
Msa0172100 AT2G35160.2 28.481 316 154 11 348 660 543 789 5.92e-25 111
Msa0172100 AT2G35160.3 28.481 316 154 11 348 660 543 789 5.92e-25 111
Msa0172100 AT2G35160.1 28.481 316 154 11 348 660 543 789 5.92e-25 111
Msa0172100 AT2G35160.4 28.481 316 154 11 348 660 543 789 5.92e-25 111
Msa0172100 AT2G35160.5 28.481 316 154 11 348 660 507 753 6.33e-25 111
Msa0172100 AT5G13960.1 33.491 212 118 7 473 663 413 622 1.12e-21 100
Msa0172100 AT5G13960.2 33.491 212 118 7 473 663 279 488 1.45e-21 99.4
Msa0172100 AT3G03750.2 34.031 191 112 5 476 660 163 345 6.31e-21 95.5
Msa0172100 AT2G23740.4 45.378 119 60 4 480 596 1200 1315 1.27e-20 98.2
Msa0172100 AT2G23740.5 45.378 119 60 4 480 596 1200 1315 1.27e-20 98.2
Msa0172100 AT1G17770.1 25.000 352 177 16 338 661 397 689 3.73e-20 95.9
Msa0172100 AT4G13460.1 26.623 308 155 10 348 639 386 638 1.95e-18 90.1
Msa0172100 AT4G13460.2 26.623 308 155 10 348 639 386 638 1.95e-18 90.1
Msa0172100 AT2G24740.1 33.508 191 104 8 489 661 566 751 1.29e-16 84.7
Msa0172100 AT2G33290.1 24.675 308 160 10 348 639 388 639 1.42e-14 77.8
Msa0172100 AT2G33290.3 24.675 308 160 10 348 639 388 639 1.42e-14 77.8
Msa0172100 AT2G33290.4 24.675 308 160 10 348 639 388 639 1.42e-14 77.8
Msa0172100 AT2G33290.2 24.675 308 160 10 348 639 388 639 1.42e-14 77.8
Msa0172100 AT3G03750.1 30.159 189 106 6 476 660 163 329 3.43e-13 72.0
Msa0172100 AT1G76710.2 26.404 178 102 6 487 660 72 224 8.30e-13 72.0
Msa0172100 AT1G76710.1 26.404 178 102 6 487 660 72 224 8.30e-13 72.0
Msa0172100 AT1G76710.3 26.404 178 102 6 487 660 72 224 8.98e-13 72.0
Msa0172100 AT1G76710.4 26.404 178 102 6 487 660 72 224 9.78e-13 71.6
Msa0172100 AT1G77300.2 29.381 194 104 8 475 661 996 1163 8.56e-12 69.3
Msa0172100 AT1G77300.1 29.381 194 104 8 475 661 996 1163 1.07e-11 69.3
Msa0172100 AT4G30860.1 28.415 183 99 8 483 661 307 461 1.32e-11 68.2

Find 186 sgRNAs with CRISPR-Local

Find 520 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGAATGTAATTAAATTT+TGG 0.115496 1_4:-57045826 None:intergenic
TCACATCTTTGTTTGTAAAA+AGG 0.151094 1_4:-57047983 None:intergenic
TGTAAAGGTAATATTGTTAT+TGG 0.195476 1_4:+57045601 Msa0172100:CDS
AATAACAATATTACCTTTAC+AGG 0.207714 1_4:-57045599 None:intergenic
TTGGATTCTTGAAGCCCTTT+TGG 0.240953 1_4:-57051938 None:intergenic
CTAAGTCCTTCATAGCATTA+AGG 0.248100 1_4:-57043717 None:intergenic
TGAAATTATTTGCAGGATTA+TGG 0.255105 1_4:+57049346 Msa0172100:intron
TAAATTGTGATGCTGCATTA+AGG 0.275228 1_4:+57045659 Msa0172100:CDS
TCATTCTTAGTCCTCTCAAT+TGG 0.283626 1_4:-57046090 None:intergenic
AATAGTTTACCTGCAATTTA+CGG 0.292002 1_4:-57046227 None:intergenic
GGGTTCGGAAGTGGGATTAA+AGG 0.294538 1_4:+57046885 Msa0172100:CDS
TGCTTGGATGCAACACATAA+TGG 0.299187 1_4:+57046922 Msa0172100:CDS
TCTCCATCATGACAACTTAC+TGG 0.309078 1_4:-57044124 None:intergenic
AGATGTCCCTTGCATGATTC+AGG 0.322166 1_4:-57046120 None:intergenic
AATATTACCTTTACAGGTTC+TGG 0.338703 1_4:-57045593 None:intergenic
TATTGGTTCTTCTTCACCCT+TGG 0.357865 1_4:+57045618 Msa0172100:CDS
AGGTAAAGGAGGGGAGAGGC+TGG 0.360422 1_4:+57052001 Msa0172100:CDS
AGGTTTAAGCCGTAAATTGC+AGG 0.364369 1_4:+57046218 Msa0172100:CDS
TCCCTTGCATGATTCAGGTT+TGG 0.366414 1_4:-57046115 None:intergenic
TCTGGTTAGGAAGTTTATAA+AGG 0.366891 1_4:+57046140 Msa0172100:CDS
CTTTGATACATTGTGTTACA+TGG 0.369163 1_4:-57045844 None:intergenic
TTAGTATCGCCAGTTTCTAT+TGG 0.370950 1_4:+57051915 Msa0172100:CDS
CAGTCTGCATCAAGTGTTAC+AGG 0.375742 1_4:-57046862 None:intergenic
GATCAGAAGATTAAAGTATC+AGG 0.378923 1_4:+57044445 Msa0172100:CDS
GATCAGAAGATTAAAGTATC+AGG 0.378923 1_4:+57045016 Msa0172100:CDS
GATTGCTGCTCCGATTGTTC+AGG 0.382082 1_4:+57045907 Msa0172100:CDS
CCTGTCATATAATTCTGAAT+TGG 0.382980 1_4:-57046803 None:intergenic
TAAGTCCTTCATAGCATTAA+GGG 0.383476 1_4:-57043716 None:intergenic
AGTTTCCTGTTTAAAAGTCT+TGG 0.385683 1_4:-57044248 None:intergenic
GGCTTGAATTTAAATCGAAA+TGG 0.393994 1_4:+57045685 Msa0172100:CDS
ATTGGTTCTTCTTCACCCTT+GGG 0.396671 1_4:+57045619 Msa0172100:CDS
CATTCTTAGTCCTCTCAATT+GGG 0.399084 1_4:-57046089 None:intergenic
CAACATTGAAATGCTTCAAT+AGG 0.399389 1_4:-57049394 None:intergenic
CTTTGAGTCAAAGGAAGATA+AGG 0.400162 1_4:+57043876 Msa0172100:CDS
TGAAACCCTCTCAAATTTCC+AGG 0.401603 1_4:+57044272 Msa0172100:CDS
ACCAAGTGAAGTTTCTGTTT+AGG 0.402308 1_4:-57044151 None:intergenic
GACTCAAGAAGGAAAGGGCT+GGG 0.404908 1_4:+57046714 Msa0172100:CDS
TTATTGAAGATGACAATTAT+CGG 0.405456 1_4:+57043809 Msa0172100:CDS
ACTTGCTCGGATTGCGGATG+AGG 0.407887 1_4:+57045885 Msa0172100:CDS
TGCCGTGATAAGAAACAAAA+AGG 0.409219 1_4:+57049433 Msa0172100:CDS
AACCAGTTCGCAGGCATTCA+TGG 0.414985 1_4:+57044312 Msa0172100:CDS
GTTTCCTGTTTAAAAGTCTT+GGG 0.416453 1_4:-57044247 None:intergenic
TCAGGTGTCTCCACTTCAAC+AGG 0.424005 1_4:-57047700 None:intergenic
GGAAGTTTATAAAGGAGTGC+TGG 0.425648 1_4:+57046148 Msa0172100:CDS
GCCAGTTTCTATTGGCCAAA+AGG 0.427319 1_4:+57051923 Msa0172100:CDS
TGAATCATGCAAGGGACATC+TGG 0.436215 1_4:+57046122 Msa0172100:CDS
TACTAATCCAAGGGCAATCA+AGG 0.437821 1_4:+57043693 Msa0172100:CDS
CTGTAACACTTGATGCAGAC+TGG 0.438878 1_4:+57046863 Msa0172100:CDS
GCTTGGATGCAACACATAAT+GGG 0.439200 1_4:+57046923 Msa0172100:CDS
GAATGCCTGCGAACTGGTTG+TGG 0.444610 1_4:-57044308 None:intergenic
TGTGCATGCTCTCAAGAAAC+TGG 0.447117 1_4:+57045955 Msa0172100:CDS
GTGACATGCAGTGTGGAAAT+CGG 0.448940 1_4:+57046184 Msa0172100:CDS
TTGCAAGATTCATCAATCAT+AGG 0.449185 1_4:+57046950 Msa0172100:CDS
TTAAGGGCCTTGATTGCCCT+TGG 0.450224 1_4:-57043700 None:intergenic
AAGACAGTCGCCTGAACAAT+CGG 0.460644 1_4:-57045917 None:intergenic
GCAACTTGTCGAAACAGATC+CGG 0.461669 1_4:-57044491 None:intergenic
GCAACTTGTCGAAACAGATC+CGG 0.461669 1_4:-57045062 None:intergenic
CCAGTTTCTATTGGCCAAAA+GGG 0.463265 1_4:+57051924 Msa0172100:CDS
ATTTAAATCGAAATGGATCA+AGG 0.466304 1_4:+57045692 Msa0172100:CDS
CAGGTGTTCTTGACTCAAGA+AGG 0.467731 1_4:+57046703 Msa0172100:intron
GGATGGCTAAGTCCATCAAT+TGG 0.470158 1_4:-57044965 None:intergenic
CATTGTAAAGATCCAATTGA+TGG 0.470887 1_4:+57044382 Msa0172100:CDS
CATTGTAAAGATCCAATTGA+TGG 0.470887 1_4:+57044953 Msa0172100:CDS
TCCTTTGTCTGTGAATATGC+AGG 0.471253 1_4:+57046769 Msa0172100:CDS
CTTTGAGTCAAAGGAAGATA+AGG 0.471512 1_4:+57043849 Msa0172100:CDS
AATACACATAATGATGATGC+TGG 0.471715 1_4:-57046056 None:intergenic
CAAGGCCCTTAATGCTATGA+AGG 0.475493 1_4:+57043711 Msa0172100:CDS
TGCAGACTGGGGTTCGGAAG+TGG 0.479829 1_4:+57046876 Msa0172100:CDS
GGATGGCTAGGTCCATCAAT+TGG 0.481202 1_4:-57044394 None:intergenic
ATGTCAATATTTCACTTGCT+CGG 0.482161 1_4:+57045872 Msa0172100:CDS
ATATGTATGTCTATCATTGC+CGG 0.482653 1_4:-57046839 None:intergenic
TTCACAGACAAAGGATCCCT+TGG 0.485409 1_4:-57046761 None:intergenic
CATGCAAGGGACATCTGGTT+AGG 0.486296 1_4:+57046127 Msa0172100:CDS
TTTGACAGTAAGATTTCCAT+TGG 0.487180 1_4:-57045506 None:intergenic
GGTAAAGGAGGGGAGAGGCT+GGG 0.488450 1_4:+57052002 Msa0172100:CDS
ACAGATCCGGGATGAAACTT+AGG 0.488825 1_4:-57044478 None:intergenic
ACAGATCCGGGATGAAACTT+AGG 0.488825 1_4:-57045049 None:intergenic
TGACTCAAGAAGGAAAGGGC+TGG 0.490394 1_4:+57046713 Msa0172100:CDS
TGTGGGATTCATATCTTGCC+TGG 0.492190 1_4:-57044290 None:intergenic
ATCCATGAATGCCTGCGAAC+TGG 0.494735 1_4:-57044314 None:intergenic
ATTGAAATGCTTCAATAGGA+TGG 0.499430 1_4:-57049390 None:intergenic
AGATTGCATGTCCATGGTAA+AGG 0.499567 1_4:+57046029 Msa0172100:CDS
ACATGATAATAGTGGCGGTC+AGG 0.500724 1_4:-57047718 None:intergenic
AAATTCTCACATGATAATAG+TGG 0.504059 1_4:-57047726 None:intergenic
ACTTGATGCAGACTGGGGTT+CGG 0.504834 1_4:+57046870 Msa0172100:CDS
GGATGAAGAGGCATTATGCT+TGG 0.505357 1_4:+57046906 Msa0172100:CDS
AGATGCATACTTTGAGTCAA+AGG 0.508357 1_4:+57043840 Msa0172100:CDS
CAACTTGTCGAAACAGATCC+GGG 0.509028 1_4:-57044490 None:intergenic
CAACTTGTCGAAACAGATCC+GGG 0.509028 1_4:-57045061 None:intergenic
ACCTGCAGATGATGCTGCCC+CGG 0.510370 1_4:-57044359 None:intergenic
CTTAATGCTATGAAGGACTT+AGG 0.511792 1_4:+57043718 Msa0172100:CDS
TTTGACAGATTGCATGTCCA+TGG 0.511932 1_4:+57046023 Msa0172100:CDS
CCAATTCAGAATTATATGAC+AGG 0.514306 1_4:+57046803 Msa0172100:CDS
GGCTCACTAAATGCTTCCAA+TGG 0.514313 1_4:+57045490 Msa0172100:intron
TATGTTGAAGACATAACAAA+AGG 0.515772 1_4:+57045751 Msa0172100:CDS
TGTAACACTTGATGCAGACT+GGG 0.519571 1_4:+57046864 Msa0172100:CDS
TGACATGCAGTGTGGAAATC+GGG 0.519904 1_4:+57046185 Msa0172100:CDS
TAAGGCATACTTTGAGTCAA+AGG 0.523841 1_4:+57043867 Msa0172100:CDS
ACCTTCACATTCTGTGCAGT+AGG 0.524995 1_4:-57051982 None:intergenic
AATAGACATTCCTGTTGAAG+TGG 0.525349 1_4:+57047690 Msa0172100:CDS
GCAGACTGGGGTTCGGAAGT+GGG 0.526732 1_4:+57046877 Msa0172100:CDS
GACAGGATTGTGCATAGTAC+CGG 0.531414 1_4:+57046820 Msa0172100:CDS
GATTGCCCTTGGATTAGTAG+TGG 0.531861 1_4:-57043689 None:intergenic
TCTGGTGTTATTATTGCATG+TGG 0.532171 1_4:-57045575 None:intergenic
CTTAGGAATCTCGGAGGTCG+AGG 0.532485 1_4:+57043735 Msa0172100:CDS
ATAGATAGAAAGATCTATCC+CGG 0.532951 1_4:+57044340 Msa0172100:CDS
TATTCTGATACACATCTGAC+AGG 0.533483 1_4:-57045531 None:intergenic
GTTCTTGACTCAAGAAGGAA+AGG 0.536862 1_4:+57046708 Msa0172100:CDS
CCCGGGGCAGCATCATCTGC+AGG 0.537644 1_4:+57044358 Msa0172100:CDS
AAGGAGTGCTGGAGGAAATG+TGG 0.543111 1_4:+57046159 Msa0172100:CDS
TTCTGTGCAGTAGGATGTGG+TGG 0.543716 1_4:-57051973 None:intergenic
AGAAGATTTAACTTCTCCCA+AGG 0.546782 1_4:-57045635 None:intergenic
ATGCTTCAATAGGATGGGTA+TGG 0.547473 1_4:-57049384 None:intergenic
AATAACACCAGAACCTGTAA+AGG 0.548607 1_4:+57045586 Msa0172100:CDS
ACATTCTGTGCAGTAGGATG+TGG 0.549149 1_4:-57051976 None:intergenic
GTGAAGGTAAAGGAGGGGAG+AGG 0.552043 1_4:+57051997 Msa0172100:CDS
GCTCCAGTAAGTTGTCATGA+TGG 0.552655 1_4:+57044121 Msa0172100:CDS
GAATCCCACAACCAGTTCGC+AGG 0.552736 1_4:+57044303 Msa0172100:CDS
TATTTCACTTGCTCGGATTG+CGG 0.555234 1_4:+57045879 Msa0172100:CDS
TATGTCTTCAACATATCGAA+AGG 0.556421 1_4:-57045743 None:intergenic
TGCACAGAATGTGAAGGTAA+AGG 0.556996 1_4:+57051987 Msa0172100:CDS
TTGAAATGCTTCAATAGGAT+GGG 0.559393 1_4:-57049389 None:intergenic
TCACAGACAAAGGATCCCTT+GGG 0.563094 1_4:-57046760 None:intergenic
CTGGTGTTATTATTGCATGT+GGG 0.563538 1_4:-57045574 None:intergenic
CCTGCAGATGATGCTGCCCC+GGG 0.564331 1_4:-57044358 None:intergenic
TGTGATGCTGCATTAAGGAC+TGG 0.565305 1_4:+57045664 Msa0172100:CDS
CTTGGTAGATATAGACAACC+AGG 0.566110 1_4:+57044168 Msa0172100:CDS
ATCTTGCCTGGAAATTTGAG+AGG 0.568497 1_4:-57044278 None:intergenic
CTCTGAATAGAAGGATGGCT+AGG 0.569399 1_4:-57044406 None:intergenic
TATGAAGGACTTAGGAATCT+CGG 0.570150 1_4:+57043726 Msa0172100:CDS
ACTCAAGAAGGAAAGGGCTG+GGG 0.575809 1_4:+57046715 Msa0172100:CDS
TCATGACCACTACTAATCCA+AGG 0.576059 1_4:+57043683 None:intergenic
GAAGATTTAACTTCTCCCAA+GGG 0.576136 1_4:-57045634 None:intergenic
CTCGGAGGTCGAGGTGACAC+CGG 0.577150 1_4:+57043744 Msa0172100:CDS
CCTTTGTCTGTGAATATGCA+GGG 0.579512 1_4:+57046770 Msa0172100:CDS
AATGCCTGCGAACTGGTTGT+GGG 0.580159 1_4:-57044307 None:intergenic
AAAAGGGCTTCAAGAATCCA+AGG 0.583197 1_4:+57051940 Msa0172100:CDS
CCCTGCATATTCACAGACAA+AGG 0.583203 1_4:-57046770 None:intergenic
TTCTTGACTCAAGAAGGAAA+GGG 0.585578 1_4:+57046709 Msa0172100:CDS
ATACACATAATGATGATGCT+GGG 0.585836 1_4:-57046055 None:intergenic
TTAGCCATCCTTCTATTCAG+AGG 0.586545 1_4:+57044978 Msa0172100:CDS
TAGATAGAAAGATCTATCCC+GGG 0.588092 1_4:+57044341 Msa0172100:CDS
ACCTAAACAGAAACTTCACT+TGG 0.589122 1_4:+57044150 Msa0172100:CDS
CAGAATGTGAAGGTAAAGGA+GGG 0.591703 1_4:+57051991 Msa0172100:CDS
GATAAACCTAAGTTTCATCC+CGG 0.594944 1_4:+57044472 Msa0172100:CDS
GATAAACCTAAGTTTCATCC+CGG 0.594944 1_4:+57045043 Msa0172100:CDS
ATGCTGGGGTTCCTTTACCA+TGG 0.596438 1_4:-57046040 None:intergenic
AACACTAGAAGATTTGCCCA+AGG 0.602862 1_4:+57046744 Msa0172100:CDS
GTTTCTTGAGAGCATGCACA+AGG 0.604033 1_4:-57045952 None:intergenic
TCTTGCCTGGAAATTTGAGA+GGG 0.606453 1_4:-57044277 None:intergenic
GAAGCATTTCAATGTTGTTG+TGG 0.608519 1_4:+57049400 Msa0172100:CDS
TCCTGTTTAAAAGTCTTGGG+AGG 0.609380 1_4:-57044244 None:intergenic
GTAAAGAGTGCCCAATTGAG+AGG 0.609557 1_4:+57046079 Msa0172100:CDS
GAGCATACGAGGAGTTGACC+TGG 0.613102 1_4:+57048006 Msa0172100:CDS
CTAGCCATCCTTCTATTCAG+AGG 0.613137 1_4:+57044407 Msa0172100:CDS
CAAAGATGTGAGAGCATACG+AGG 0.613209 1_4:+57047995 Msa0172100:CDS
GTGGTGGGAGATGACCTCCT+TGG 0.613281 1_4:-57051957 None:intergenic
GACCAAACCTGAATCATGCA+AGG 0.615446 1_4:+57046113 Msa0172100:CDS
AGTGGGATTAAAGGATGAAG+AGG 0.621432 1_4:+57046894 Msa0172100:CDS
ACAGAATGTGAAGGTAAAGG+AGG 0.621603 1_4:+57051990 Msa0172100:CDS
GCATGCTCTCAAGAAACTGG+TGG 0.621903 1_4:+57045958 Msa0172100:CDS
GTGTTTGCTTACACTTCACA+AGG 0.626768 1_4:+57045982 Msa0172100:CDS
AGTTGTCAGCTGATAAAACC+TGG 0.627203 1_4:-57044186 None:intergenic
TTCTCACATGATAATAGTGG+CGG 0.628566 1_4:-57047723 None:intergenic
TACACATAATGATGATGCTG+GGG 0.630004 1_4:-57046054 None:intergenic
ACACTAGAAGATTTGCCCAA+GGG 0.632238 1_4:+57046745 Msa0172100:CDS
CATGACCACTACTAATCCAA+GGG 0.633516 1_4:+57043684 None:intergenic
AGTTTATAAAGGAGTGCTGG+AGG 0.635155 1_4:+57046151 Msa0172100:CDS
ATCAAGGCAAACTCTTTCTG+AGG 0.636247 1_4:+57045708 Msa0172100:CDS
TCTGTTTCGACAAGTTGCAA+TGG 0.640527 1_4:+57044496 Msa0172100:CDS
TCTGTTTCGACAAGTTGCAA+TGG 0.640527 1_4:+57045067 Msa0172100:CDS
AGCATACGAGGAGTTGACCT+GGG 0.646180 1_4:+57048007 Msa0172100:CDS
AGAATGTGAAGGTAAAGGAG+GGG 0.653479 1_4:+57051992 Msa0172100:CDS
TCCTACTGCACAGAATGTGA+AGG 0.660378 1_4:+57051981 Msa0172100:CDS
ACCAAACCTGAATCATGCAA+GGG 0.670931 1_4:+57046114 Msa0172100:CDS
CTTTGTCTGTGAATATGCAG+GGG 0.680388 1_4:+57046771 Msa0172100:CDS
GTAACACTTGATGCAGACTG+GGG 0.705204 1_4:+57046865 Msa0172100:CDS
GTGTTGTCTGTAGAAGACAC+TGG 0.713454 1_4:+57044217 Msa0172100:CDS
TGTGGATGTGACATGCAGTG+TGG 0.717503 1_4:+57046177 Msa0172100:CDS
ATTAGATGAAACCAACAGTG+AGG 0.720508 1_4:+57045798 Msa0172100:CDS
AGATAGAAAGATCTATCCCG+GGG 0.720635 1_4:+57044342 Msa0172100:CDS
ATTCTGATACACATCTGACA+GGG 0.723160 1_4:-57045530 None:intergenic
TCTGTGCAGTAGGATGTGGT+GGG 0.730044 1_4:-57051972 None:intergenic
GGAAATCGGGTAGTGCAACG+AGG 0.738617 1_4:+57046198 Msa0172100:CDS
GAAGGACTTAGGAATCTCGG+AGG 0.784980 1_4:+57043729 Msa0172100:CDS
AGGGCTTCAAGAATCCAAGG+AGG 0.789697 1_4:+57051943 Msa0172100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAATAAAAGTTAATTATA+CGG - chr1_4:57044014-57044033 None:intergenic 10.0%
!!! CAAAATTGAATATATTTTTT+TGG - chr1_4:57050967-57050986 None:intergenic 10.0%
!!! CAAAAAAATATATTCAATTT+TGG + chr1_4:57050965-57050984 Msa0172100:intron 10.0%
!! ATAAATTGTATGATAAAAAG+TGG + chr1_4:57043782-57043801 Msa0172100:CDS 15.0%
!! TAAATTGTATGATAAAAAGT+GGG + chr1_4:57043783-57043802 Msa0172100:CDS 15.0%
!! TATAAAACACTAGTAATTAA+AGG - chr1_4:57043967-57043986 None:intergenic 15.0%
!! TGATGAATATAATATAGTTA+CGG - chr1_4:57045353-57045372 None:intergenic 15.0%
!! ATATCTTCATTATACTATAA+AGG - chr1_4:57046413-57046432 None:intergenic 15.0%
!! AATTAAAAAAGTTAAGTTTG+TGG + chr1_4:57046462-57046481 Msa0172100:intron 15.0%
!! ATTTCAATAACATTTCTAAT+TGG + chr1_4:57046983-57047002 Msa0172100:intron 15.0%
!! ACAATTAGTAAATACTTATA+AGG - chr1_4:57048738-57048757 None:intergenic 15.0%
!!! ATAATAACTCTTTTCATATA+GGG - chr1_4:57048770-57048789 None:intergenic 15.0%
!! GATGAAATTCAATAAAAAAA+TGG - chr1_4:57049692-57049711 None:intergenic 15.0%
!! TTGAACTAAATTAATTGATT+TGG + chr1_4:57050230-57050249 Msa0172100:intron 15.0%
!!! ACTTAATGTCATTATATTTT+GGG - chr1_4:57050315-57050334 None:intergenic 15.0%
!!! AACTTAATGTCATTATATTT+TGG - chr1_4:57050316-57050335 None:intergenic 15.0%
!! ATATAATGACATTAAGTTAT+TGG + chr1_4:57050318-57050337 Msa0172100:intron 15.0%
!! TTAAATATGAATAAGAGTTA+AGG + chr1_4:57050436-57050455 Msa0172100:intron 15.0%
!!! ACTTTTTTTTTTTTTTTGTG+AGG - chr1_4:57051559-57051578 None:intergenic 15.0%
!! TTATTGAAGATGACAATTAT+CGG + chr1_4:57043809-57043828 Msa0172100:CDS 20.0%
!!! CTTCTAGAAAGAATATAATT+AGG - chr1_4:57044080-57044099 None:intergenic 20.0%
!!! CACAAATTTTAAAAGAAAAC+AGG + chr1_4:57044718-57044737 Msa0172100:intron 20.0%
!! ATGAATATAATCTAGATACA+GGG - chr1_4:57044775-57044794 None:intergenic 20.0%
!! AAAATTCGTGCAAAAAATAT+AGG - chr1_4:57045284-57045303 None:intergenic 20.0%
!!! CACGAATTTTAAAAGAAAAT+AGG + chr1_4:57045294-57045313 Msa0172100:intron 20.0%
!! ATGAATATAATATAGTTACG+GGG - chr1_4:57045351-57045370 None:intergenic 20.0%
!! GATGAATATAATATAGTTAC+GGG - chr1_4:57045352-57045371 None:intergenic 20.0%
!!! TTTTCTTGTTGATTTTCTAT+AGG + chr1_4:57044897-57044916 Msa0172100:intron 20.0%
!! AATAACAATATTACCTTTAC+AGG - chr1_4:57045602-57045621 None:intergenic 20.0%
!! TGTAAAGGTAATATTGTTAT+TGG + chr1_4:57045601-57045620 Msa0172100:CDS 20.0%
!!! CATGGAATGTAATTAAATTT+TGG - chr1_4:57045829-57045848 None:intergenic 20.0%
!! TGTTATGTTAGATGAAATTA+TGG + chr1_4:57046323-57046342 Msa0172100:intron 20.0%
!! TTCATTATACTATAAAGGTA+TGG - chr1_4:57046408-57046427 None:intergenic 20.0%
!!! ATCTCCTATATGTTTTTATT+TGG + chr1_4:57046503-57046522 Msa0172100:intron 20.0%
!! TGATCCAAATAAAAACATAT+AGG - chr1_4:57046510-57046529 None:intergenic 20.0%
!!! TTTGGATCACTATATTATTT+TGG + chr1_4:57046521-57046540 Msa0172100:intron 20.0%
!!! TAATAAGAATCACCATTTTA+CGG - chr1_4:57046612-57046631 None:intergenic 20.0%
!! AATAAGTTTAGCAACAATAA+CGG - chr1_4:57046642-57046661 None:intergenic 20.0%
!! AAGAAATAGTTGTACTTATT+TGG - chr1_4:57047155-57047174 None:intergenic 20.0%
!!! AGTACAACTATTTCTTTTTT+TGG + chr1_4:57047159-57047178 Msa0172100:intron 20.0%
!!! GTACAACTATTTCTTTTTTT+GGG + chr1_4:57047160-57047179 Msa0172100:intron 20.0%
!! AAAGAAAAAATGTTGTCTTA+TGG - chr1_4:57047412-57047431 None:intergenic 20.0%
!! AAAGAAAAAATGTTGTCTTA+TGG - chr1_4:57047412-57047431 None:intergenic 20.0%
!! AATAACAGAGAAAAGAATAT+TGG - chr1_4:57047594-57047613 None:intergenic 20.0%
!! ATACACAATCAAAATTCAAA+AGG - chr1_4:57048113-57048132 None:intergenic 20.0%
!!! CATAATAACTCTTTTCATAT+AGG - chr1_4:57048771-57048790 None:intergenic 20.0%
!! TAACTAATCATTACATATTC+AGG + chr1_4:57048888-57048907 Msa0172100:intron 20.0%
!! AACTAATCATTACATATTCA+GGG + chr1_4:57048889-57048908 Msa0172100:intron 20.0%
!!! TTTTTGGGTAATAGTTATTT+TGG - chr1_4:57048916-57048935 None:intergenic 20.0%
!!! GAGAAATTGTGATTTTTTTT+GGG - chr1_4:57048931-57048950 None:intergenic 20.0%
!!! TGAGAAATTGTGATTTTTTT+TGG - chr1_4:57048932-57048951 None:intergenic 20.0%
!!! GTATTTTTTTTCAGCAAAAT+TGG - chr1_4:57049179-57049198 None:intergenic 20.0%
!! TTGTTGAAATAACATAATCA+AGG + chr1_4:57049245-57049264 Msa0172100:intron 20.0%
!! CTCTTATTAATTATAGTTAG+TGG - chr1_4:57049728-57049747 None:intergenic 20.0%
!!! ATTTTTTTGTCTTAACTCTA+CGG + chr1_4:57050070-57050089 Msa0172100:intron 20.0%
!!! ATCAATTAATTTAGTTCAAG+TGG - chr1_4:57050229-57050248 None:intergenic 20.0%
!!! AACTAAATTAATTGATTTGG+TGG + chr1_4:57050233-57050252 Msa0172100:intron 20.0%
!! AATTGAATCTATTTGAATCA+AGG - chr1_4:57050865-57050884 None:intergenic 20.0%
!! AAAATTGATTATGACATGTT+TGG - chr1_4:57051019-57051038 None:intergenic 20.0%
!!! AAATTGATTTTTCGTATGTT+TGG - chr1_4:57051081-57051100 None:intergenic 20.0%
!!! CATAAGTTTGATTCTAATTT+TGG - chr1_4:57051126-57051145 None:intergenic 20.0%
!!! CAAAATTATTTTCACCTATA+TGG - chr1_4:57051841-57051860 None:intergenic 20.0%
!!! TAGGTGAAAATAATTTTGTT+TGG + chr1_4:57051843-57051862 Msa0172100:intron 20.0%
!!! AGGTGAAAATAATTTTGTTT+GGG + chr1_4:57051844-57051863 Msa0172100:intron 20.0%
!!! TTTGGGAATTCATTTTTTTT+AGG + chr1_4:57051861-57051880 Msa0172100:intron 20.0%
!!! TTGGGAATTCATTTTTTTTA+GGG + chr1_4:57051862-57051881 Msa0172100:intron 20.0%
!!! AATTCATTTTTTTTAGGGAT+TGG + chr1_4:57051867-57051886 Msa0172100:intron 20.0%
!!! TTATACAACTTTTTCAACAC+CGG - chr1_4:57043766-57043785 None:intergenic 25.0%
!! ATATTTTTCCTCTGAATAGA+AGG - chr1_4:57044418-57044437 None:intergenic 25.0%
! GATGAATATAATCTAGATAC+AGG - chr1_4:57044776-57044795 None:intergenic 25.0%
!! CAACAATATATGCTTTTCTT+AGG - chr1_4:57044828-57044847 None:intergenic 25.0%
!! ATATTTTTCCTCTGAATAGA+AGG - chr1_4:57044418-57044437 None:intergenic 25.0%
!! CAACAATATATGCTTTTCTT+AGG - chr1_4:57044828-57044847 None:intergenic 25.0%
! ATTTAAATCGAAATGGATCA+AGG + chr1_4:57045692-57045711 Msa0172100:CDS 25.0%
! TATGTTGAAGACATAACAAA+AGG + chr1_4:57045751-57045770 Msa0172100:CDS 25.0%
! AATAGTTTACCTGCAATTTA+CGG - chr1_4:57046230-57046249 None:intergenic 25.0%
! ATACGAATGCAATATGTTTA+AGG + chr1_4:57046349-57046368 Msa0172100:intron 25.0%
! AAGGTATGGAATATAAATAG+AGG - chr1_4:57046394-57046413 None:intergenic 25.0%
! TCTGAATTTCTAACTTGATT+AGG - chr1_4:57046436-57046455 None:intergenic 25.0%
!! AATAAGAATCACCATTTTAC+GGG - chr1_4:57046611-57046630 None:intergenic 25.0%
! TATTGTTGCTAAACTTATTG+TGG + chr1_4:57046643-57046662 Msa0172100:intron 25.0%
!!! ACTATTTCTTTTTTTGGGTT+TGG + chr1_4:57047165-57047184 Msa0172100:intron 25.0%
! TCAATCATAATGCAAGAAAT+TGG - chr1_4:57047358-57047377 None:intergenic 25.0%
! AAATTCTCACATGATAATAG+TGG - chr1_4:57047729-57047748 None:intergenic 25.0%
! ACTATTATCATGTGAGAATT+TGG + chr1_4:57047728-57047747 Msa0172100:intron 25.0%
!! CACATCTTTGTTTGTAAAAA+GGG - chr1_4:57047985-57048004 None:intergenic 25.0%
!! TCACATCTTTGTTTGTAAAA+AGG - chr1_4:57047986-57048005 None:intergenic 25.0%
! AAATGATATGTATTGTTCTG+AGG - chr1_4:57048039-57048058 None:intergenic 25.0%
! GATAGGATATAAAATCATCA+TGG - chr1_4:57048191-57048210 None:intergenic 25.0%
! TAAGATAAGGTATGTATAAG+GGG - chr1_4:57048213-57048232 None:intergenic 25.0%
! GTAAGATAAGGTATGTATAA+GGG - chr1_4:57048214-57048233 None:intergenic 25.0%
! TTCTTAATGGGAAAATACTT+GGG + chr1_4:57048270-57048289 Msa0172100:intron 25.0%
! GTTGTCTAATGTGAAAAAAT+AGG - chr1_4:57048513-57048532 None:intergenic 25.0%
! TATCATTGTGTACTAAGTAT+AGG - chr1_4:57049037-57049056 None:intergenic 25.0%
!!! AGACAACTTTAATTTGAACA+TGG + chr1_4:57049081-57049100 Msa0172100:intron 25.0%
! AATTTAACACCTGAAAATTG+TGG + chr1_4:57049138-57049157 Msa0172100:intron 25.0%
!! AAAGATTTACCACAATTTTC+AGG - chr1_4:57049150-57049169 None:intergenic 25.0%
! TGAAATTATTTGCAGGATTA+TGG + chr1_4:57049346-57049365 Msa0172100:intron 25.0%
!! GGTTTGTGTATGAATTTTAA+GGG - chr1_4:57049804-57049823 None:intergenic 25.0%
!! AGGTTTGTGTATGAATTTTA+AGG - chr1_4:57049805-57049824 None:intergenic 25.0%
! CTCAAAATAATAGTCATTCA+AGG - chr1_4:57049825-57049844 None:intergenic 25.0%
!!! GAATGACTATTATTTTGAGA+CGG + chr1_4:57049826-57049845 Msa0172100:intron 25.0%
!!! AATGACTATTATTTTGAGAC+GGG + chr1_4:57049827-57049846 Msa0172100:intron 25.0%
! TTTCTGATGGAAACAATATT+TGG - chr1_4:57050158-57050177 None:intergenic 25.0%
! GGAATATAGAAAAACAAACA+AGG - chr1_4:57050598-57050617 None:intergenic 25.0%
!!! GTTTTGATGAAAGAATCTTT+GGG - chr1_4:57050623-57050642 None:intergenic 25.0%
!!! AGTTTTGATGAAAGAATCTT+TGG - chr1_4:57050624-57050643 None:intergenic 25.0%
! TTTGTTTGATTACTCTCAAA+TGG - chr1_4:57050669-57050688 None:intergenic 25.0%
!!! TATTTTTTTGGTTGTGTCTA+GGG - chr1_4:57050955-57050974 None:intergenic 25.0%
!!! ATATTTTTTTGGTTGTGTCT+AGG - chr1_4:57050956-57050975 None:intergenic 25.0%
!! TAATTTTCTTAGACACTTAC+TGG - chr1_4:57051261-57051280 None:intergenic 25.0%
! GAGTAAAGGAAAATAATGTT+TGG - chr1_4:57051292-57051311 None:intergenic 25.0%
!!! TTCTTTTGATATGTTTTTGC+AGG + chr1_4:57051393-57051412 Msa0172100:intron 25.0%
! GTCAATTGAGTTAAGTTTAA+CGG - chr1_4:57051488-57051507 None:intergenic 25.0%
!! TGTTAAATGTTCTTTCTAGT+CGG + chr1_4:57051759-57051778 Msa0172100:intron 25.0%
TAAGTCCTTCATAGCATTAA+GGG - chr1_4:57043719-57043738 None:intergenic 30.0%
GTTTCCTGTTTAAAAGTCTT+GGG - chr1_4:57044250-57044269 None:intergenic 30.0%
AGTTTCCTGTTTAAAAGTCT+TGG - chr1_4:57044251-57044270 None:intergenic 30.0%
ATAGATAGAAAGATCTATCC+CGG + chr1_4:57044340-57044359 Msa0172100:CDS 30.0%
CATTGTAAAGATCCAATTGA+TGG + chr1_4:57044382-57044401 Msa0172100:CDS 30.0%
! GATCAGAAGATTAAAGTATC+AGG + chr1_4:57044445-57044464 Msa0172100:CDS 30.0%
AGGACAAATGAAAGAAAAAC+AGG - chr1_4:57044616-57044635 None:intergenic 30.0%
AGATGCAGAAAACTTTAAGT+TGG - chr1_4:57044801-57044820 None:intergenic 30.0%
CATTGTAAAGATCCAATTGA+TGG + chr1_4:57044382-57044401 Msa0172100:CDS 30.0%
! GATCAGAAGATTAAAGTATC+AGG + chr1_4:57044445-57044464 Msa0172100:CDS 30.0%
AGGACAAATGAAAGAAAAAC+AGG - chr1_4:57044616-57044635 None:intergenic 30.0%
TTTCATTTGTCCTATCTGAA+TGG + chr1_4:57045204-57045223 Msa0172100:intron 30.0%
TTTGACAGTAAGATTTCCAT+TGG - chr1_4:57045509-57045528 None:intergenic 30.0%
AATATTACCTTTACAGGTTC+TGG - chr1_4:57045596-57045615 None:intergenic 30.0%
TAAATTGTGATGCTGCATTA+AGG + chr1_4:57045659-57045678 Msa0172100:CDS 30.0%
GGCTTGAATTTAAATCGAAA+TGG + chr1_4:57045685-57045704 Msa0172100:CDS 30.0%
TATGTCTTCAACATATCGAA+AGG - chr1_4:57045746-57045765 None:intergenic 30.0%
CTTTGATACATTGTGTTACA+TGG - chr1_4:57045847-57045866 None:intergenic 30.0%
ATGTCAATATTTCACTTGCT+CGG + chr1_4:57045872-57045891 Msa0172100:CDS 30.0%
! ATACACATAATGATGATGCT+GGG - chr1_4:57046058-57046077 None:intergenic 30.0%
! AATACACATAATGATGATGC+TGG - chr1_4:57046059-57046078 None:intergenic 30.0%
TCTGGTTAGGAAGTTTATAA+AGG + chr1_4:57046140-57046159 Msa0172100:CDS 30.0%
GTTAGTTAAATCCCGTAAAA+TGG + chr1_4:57046597-57046616 Msa0172100:intron 30.0%
CTGAAGAATAAAAGATAAGC+AGG - chr1_4:57046686-57046705 None:intergenic 30.0%
! CTGCTTATCTTTTATTCTTC+AGG + chr1_4:57046684-57046703 Msa0172100:intron 30.0%
CCTGTCATATAATTCTGAAT+TGG - chr1_4:57046806-57046825 None:intergenic 30.0%
CCAATTCAGAATTATATGAC+AGG + chr1_4:57046803-57046822 Msa0172100:CDS 30.0%
ATATGTATGTCTATCATTGC+CGG - chr1_4:57046842-57046861 None:intergenic 30.0%
TTGCAAGATTCATCAATCAT+AGG + chr1_4:57046950-57046969 Msa0172100:CDS 30.0%
! TGAATAGCCTCAAATGTTTT+TGG + chr1_4:57047014-57047033 Msa0172100:intron 30.0%
AAAATCAAGTGCAATTACTG+TGG + chr1_4:57047068-57047087 Msa0172100:intron 30.0%
GAAATGAAGAGAAAAAGTGA+AGG - chr1_4:57047198-57047217 None:intergenic 30.0%
TAAGAGAGAGATAAAGAGTA+AGG + chr1_4:57047297-57047316 Msa0172100:intron 30.0%
AAAGATGTAGAGAAAAGTGA+CGG + chr1_4:57047322-57047341 Msa0172100:intron 30.0%
CAAACAAGATGAATGCAAAA+CGG - chr1_4:57047558-57047577 None:intergenic 30.0%
TGCATAATATATGCAAGATC+CGG + chr1_4:57047855-57047874 Msa0172100:intron 30.0%
ACACCACCAAAAAAAATCAA+TGG + chr1_4:57047892-57047911 Msa0172100:intron 30.0%
!!! TGTCCTCCATTGATTTTTTT+TGG - chr1_4:57047901-57047920 None:intergenic 30.0%
GGTAAGATAAGGTATGTATA+AGG - chr1_4:57048215-57048234 None:intergenic 30.0%
ATTGGAATGTAGGTAAGATA+AGG - chr1_4:57048226-57048245 None:intergenic 30.0%
! CAAGTATTTTCCCATTAAGA+AGG - chr1_4:57048271-57048290 None:intergenic 30.0%
CTTCTTAATGGGAAAATACT+TGG + chr1_4:57048269-57048288 Msa0172100:intron 30.0%
TAGTAAACTTGCCAAATCTT+GGG + chr1_4:57048487-57048506 Msa0172100:intron 30.0%
ATGTCCGAAAAGAAAAAAGA+AGG + chr1_4:57048576-57048595 Msa0172100:intron 30.0%
TGTCCGAAAAGAAAAAAGAA+GGG + chr1_4:57048577-57048596 Msa0172100:intron 30.0%
!!! TACCCCTTCTTTTTTCTTTT+CGG - chr1_4:57048583-57048602 None:intergenic 30.0%
GACTGATATGACAATATTGA+AGG - chr1_4:57048716-57048735 None:intergenic 30.0%
AGATGTGTGAAATTATTTGC+AGG + chr1_4:57049339-57049358 Msa0172100:intron 30.0%
TTGAAATGCTTCAATAGGAT+GGG - chr1_4:57049392-57049411 None:intergenic 30.0%
ATTGAAATGCTTCAATAGGA+TGG - chr1_4:57049393-57049412 None:intergenic 30.0%
CAACATTGAAATGCTTCAAT+AGG - chr1_4:57049397-57049416 None:intergenic 30.0%
!! GACCTTTTTGTTTCTTATCA+CGG - chr1_4:57049438-57049457 None:intergenic 30.0%
!! AATAAAGTGTTGAACAACCT+TGG - chr1_4:57050048-57050067 None:intergenic 30.0%
AATCAAACTCCAGATTACAA+AGG - chr1_4:57050115-57050134 None:intergenic 30.0%
! TTTGTAATCTGGAGTTTGAT+TGG + chr1_4:57050114-57050133 Msa0172100:intron 30.0%
! TTGTAATCTGGAGTTTGATT+GGG + chr1_4:57050115-57050134 Msa0172100:intron 30.0%
TTTCCATCAGAAATCAAACT+TGG + chr1_4:57050165-57050184 Msa0172100:intron 30.0%
TTCCATCAGAAATCAAACTT+GGG + chr1_4:57050166-57050185 Msa0172100:intron 30.0%
TTGAACAACATATTAGTGTG+AGG - chr1_4:57050345-57050364 None:intergenic 30.0%
! GTTTATAGTTCTACATTGGA+TGG - chr1_4:57050379-57050398 None:intergenic 30.0%
! GTGAGTTTATAGTTCTACAT+TGG - chr1_4:57050383-57050402 None:intergenic 30.0%
AGAAAAACAAACAAGGATCA+TGG - chr1_4:57050591-57050610 None:intergenic 30.0%
AACATGTCAAAGTGTATGTT+TGG + chr1_4:57050687-57050706 Msa0172100:intron 30.0%
GACAATGCATAATATATGCA+AGG + chr1_4:57050916-57050935 Msa0172100:intron 30.0%
!! ATGTTTGGTTTCACTTTTAG+AGG - chr1_4:57051066-57051085 None:intergenic 30.0%
! TTATAAGCTAACAGAGTACT+CGG - chr1_4:57051151-57051170 None:intergenic 30.0%
TACTGTAGACAATATAGATG+TGG - chr1_4:57051194-57051213 None:intergenic 30.0%
AAAAGTTACATTTCCAAGTG+AGG + chr1_4:57051573-57051592 Msa0172100:intron 30.0%
!!! TTTTTTAGGGATTGGATTGT+CGG + chr1_4:57051875-57051894 Msa0172100:intron 30.0%
CTAAGTCCTTCATAGCATTA+AGG - chr1_4:57043720-57043739 None:intergenic 35.0%
CTTAATGCTATGAAGGACTT+AGG + chr1_4:57043718-57043737 Msa0172100:CDS 35.0%
TATGAAGGACTTAGGAATCT+CGG + chr1_4:57043726-57043745 Msa0172100:CDS 35.0%
AGATGCATACTTTGAGTCAA+AGG + chr1_4:57043840-57043859 Msa0172100:CDS 35.0%
CTTTGAGTCAAAGGAAGATA+AGG + chr1_4:57043849-57043868 Msa0172100:CDS 35.0%
TAAGGCATACTTTGAGTCAA+AGG + chr1_4:57043867-57043886 Msa0172100:CDS 35.0%
CTTTGAGTCAAAGGAAGATA+AGG + chr1_4:57043849-57043868 Msa0172100:CDS 35.0%
ACCTAAACAGAAACTTCACT+TGG + chr1_4:57044150-57044169 Msa0172100:CDS 35.0%
ACCAAGTGAAGTTTCTGTTT+AGG - chr1_4:57044154-57044173 None:intergenic 35.0%
TAGATAGAAAGATCTATCCC+GGG + chr1_4:57044341-57044360 Msa0172100:CDS 35.0%
! TTTTCCTCTGAATAGAAGGA+TGG - chr1_4:57044414-57044433 None:intergenic 35.0%
GATAAACCTAAGTTTCATCC+CGG + chr1_4:57044472-57044491 Msa0172100:CDS 35.0%
GTTGCAATGGTAATCATGAT+AGG + chr1_4:57044509-57044528 Msa0172100:intron 35.0%
AACTTTCTATGAGTCCTGAA+AGG + chr1_4:57044587-57044606 Msa0172100:intron 35.0%
ATTTGTCCTGTCTGAATGAA+TGG + chr1_4:57044627-57044646 Msa0172100:intron 35.0%
! ATTACAAACCAGCTGATTTC+AGG - chr1_4:57044674-57044693 None:intergenic 35.0%
! TTTTCCTCTGAATAGAAGGA+TGG - chr1_4:57044414-57044433 None:intergenic 35.0%
GATAAACCTAAGTTTCATCC+CGG + chr1_4:57044472-57044491 Msa0172100:CDS 35.0%
GTTGCAATGGTAATCATGAT+AGG + chr1_4:57044509-57044528 Msa0172100:intron 35.0%
CTATCAATTTGAGTCCTGAA+AGG + chr1_4:57045168-57045187 Msa0172100:intron 35.0%
ATTTGTCCTATCTGAATGGT+AGG + chr1_4:57045208-57045227 Msa0172100:intron 35.0%
TAGTATCCTACCATTCAGAT+AGG - chr1_4:57045217-57045236 None:intergenic 35.0%
! ATTACCAACCAACTGATTTC+AGG - chr1_4:57045251-57045270 None:intergenic 35.0%
ATTCTGATACACATCTGACA+GGG - chr1_4:57045533-57045552 None:intergenic 35.0%
TATTCTGATACACATCTGAC+AGG - chr1_4:57045534-57045553 None:intergenic 35.0%
!! CTGGTGTTATTATTGCATGT+GGG - chr1_4:57045577-57045596 None:intergenic 35.0%
!! TCTGGTGTTATTATTGCATG+TGG - chr1_4:57045578-57045597 None:intergenic 35.0%
AATAACACCAGAACCTGTAA+AGG + chr1_4:57045586-57045605 Msa0172100:CDS 35.0%
! GAAGATTTAACTTCTCCCAA+GGG - chr1_4:57045637-57045656 None:intergenic 35.0%
! AGAAGATTTAACTTCTCCCA+AGG - chr1_4:57045638-57045657 None:intergenic 35.0%
ATTAGATGAAACCAACAGTG+AGG + chr1_4:57045798-57045817 Msa0172100:CDS 35.0%
!! TTTTGGAAATTCCTCACTGT+TGG - chr1_4:57045812-57045831 None:intergenic 35.0%
! TACACATAATGATGATGCTG+GGG - chr1_4:57046057-57046076 None:intergenic 35.0%
CATTCTTAGTCCTCTCAATT+GGG - chr1_4:57046092-57046111 None:intergenic 35.0%
TCATTCTTAGTCCTCTCAAT+TGG - chr1_4:57046093-57046112 None:intergenic 35.0%
AACTGTTCTCTGAATACTCT+TGG + chr1_4:57046257-57046276 Msa0172100:intron 35.0%
ACGGGATTTAACTAACAATG+TGG - chr1_4:57046593-57046612 None:intergenic 35.0%
TTCTTGACTCAAGAAGGAAA+GGG + chr1_4:57046709-57046728 Msa0172100:CDS 35.0%
ATTCAGGCCAAAAACATTTG+AGG - chr1_4:57047024-57047043 None:intergenic 35.0%
TTAGCCAACTCAATCACTTA+AGG + chr1_4:57047043-57047062 Msa0172100:intron 35.0%
!! TTAGCCTTAAGTGATTGAGT+TGG - chr1_4:57047050-57047069 None:intergenic 35.0%
TGACCTAGATCAAAATCTTC+AGG + chr1_4:57047100-57047119 Msa0172100:intron 35.0%
GACCTAGATCAAAATCTTCA+GGG + chr1_4:57047101-57047120 Msa0172100:intron 35.0%
!! ATCCCTGAAGATTTTGATCT+AGG - chr1_4:57047106-57047125 None:intergenic 35.0%
AAAATCTTCAGGGATGAAAG+AGG + chr1_4:57047111-57047130 Msa0172100:intron 35.0%
AAATCTTCAGGGATGAAAGA+GGG + chr1_4:57047112-57047131 Msa0172100:intron 35.0%
TAAGAGAAAGATGGAGACTA+AGG - chr1_4:57047224-57047243 None:intergenic 35.0%
GAGTGAGATTAAGAGAAAGA+TGG - chr1_4:57047233-57047252 None:intergenic 35.0%
TGTTGTCTTATGGTAGACTT+CGG - chr1_4:57047402-57047421 None:intergenic 35.0%
! CGTTTTGCATTCATCTTGTT+TGG + chr1_4:57047556-57047575 Msa0172100:intron 35.0%
AATAGACATTCCTGTTGAAG+TGG + chr1_4:57047690-57047709 Msa0172100:CDS 35.0%
TTCTCACATGATAATAGTGG+CGG - chr1_4:57047726-57047745 None:intergenic 35.0%
! TGTGAGAATTTGGTAGTCAT+AGG + chr1_4:57047738-57047757 Msa0172100:intron 35.0%
GCATAATATATGCAAGATCC+GGG + chr1_4:57047856-57047875 Msa0172100:intron 35.0%
!!! TGATTTTTTTTGGTGGTGTC+CGG - chr1_4:57047891-57047910 None:intergenic 35.0%
!!! CCTCCATTGATTTTTTTTGG+TGG - chr1_4:57047898-57047917 None:intergenic 35.0%
CCACCAAAAAAAATCAATGG+AGG + chr1_4:57047895-57047914 Msa0172100:intron 35.0%
TAAGGTATGTATAAGGGGAT+AGG - chr1_4:57048208-57048227 None:intergenic 35.0%
ATTAAATCTGGGTCACACAA+AGG + chr1_4:57048313-57048332 Msa0172100:intron 35.0%
GCACAAACATCATTAAGAAG+GGG - chr1_4:57048457-57048476 None:intergenic 35.0%
GGCACAAACATCATTAAGAA+GGG - chr1_4:57048458-57048477 None:intergenic 35.0%
AGGCACAAACATCATTAAGA+AGG - chr1_4:57048459-57048478 None:intergenic 35.0%
AGATTTGGCAAGTTTACTAG+AGG - chr1_4:57048486-57048505 None:intergenic 35.0%
CTAGTAAACTTGCCAAATCT+TGG + chr1_4:57048486-57048505 Msa0172100:intron 35.0%
GAAAAAATAGGCCCAAGATT+TGG - chr1_4:57048501-57048520 None:intergenic 35.0%
TACACATACTAAGAGGAATG+TGG - chr1_4:57048555-57048574 None:intergenic 35.0%
GGACATTTACACATACTAAG+AGG - chr1_4:57048562-57048581 None:intergenic 35.0%
GTCCGAAAAGAAAAAAGAAG+GGG + chr1_4:57048578-57048597 Msa0172100:intron 35.0%
AGACATCTTATATGCAAGTG+TGG + chr1_4:57049007-57049026 Msa0172100:intron 35.0%
GTTTGAACACGTGAAAAGAT+TGG - chr1_4:57049111-57049130 None:intergenic 35.0%
AGCTAAGATTCTCAATTCCT+AGG + chr1_4:57049279-57049298 Msa0172100:intron 35.0%
TAAACTTCATCTAGAGACCT+AGG - chr1_4:57049299-57049318 None:intergenic 35.0%
CTCTAGATGAAGTTTATGTG+AGG + chr1_4:57049303-57049322 Msa0172100:intron 35.0%
! GAAGCATTTCAATGTTGTTG+TGG + chr1_4:57049400-57049419 Msa0172100:CDS 35.0%
TGCCGTGATAAGAAACAAAA+AGG + chr1_4:57049433-57049452 Msa0172100:CDS 35.0%
AAATGTGATGTAAAAGAGCG+AGG - chr1_4:57049517-57049536 None:intergenic 35.0%
AGTTAGTGGAGTAGTTAAGT+TGG - chr1_4:57049714-57049733 None:intergenic 35.0%
!!! TATTATTTTGAGACGGGTGA+AGG + chr1_4:57049833-57049852 Msa0172100:intron 35.0%
GTAAGTTAGAAGTCTCTTGT+TGG - chr1_4:57049887-57049906 None:intergenic 35.0%
! TTACAATGGTATCGAGAGTA+TGG - chr1_4:57050002-57050021 None:intergenic 35.0%
CGATACCATTGTAAGAGTTA+TGG + chr1_4:57050008-57050027 Msa0172100:intron 35.0%
CTTCACCATAACTCTTACAA+TGG - chr1_4:57050016-57050035 None:intergenic 35.0%
TCTTAACTCTACGGTTCTTT+GGG + chr1_4:57050079-57050098 Msa0172100:intron 35.0%
! AACCCAAGTTTGATTTCTGA+TGG - chr1_4:57050171-57050190 None:intergenic 35.0%
! ATTTGGTGGATCAACACATT+GGG + chr1_4:57050247-57050266 Msa0172100:intron 35.0%
!! TTATATTTTGGGTGAAGACG+TGG - chr1_4:57050304-57050323 None:intergenic 35.0%
TGATGCTTCCAGAATTGATT+AGG - chr1_4:57050468-57050487 None:intergenic 35.0%
TGATGAAAGAATCTTTGGGT+TGG - chr1_4:57050619-57050638 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG + chr1_4:57050921-57050940 Msa0172100:intron 35.0%
GCATAATATATGCAAGGTCT+GGG + chr1_4:57050922-57050941 Msa0172100:intron 35.0%
CATAATATATGCAAGGTCTG+GGG + chr1_4:57050923-57050942 Msa0172100:intron 35.0%
ATATAGATGTGGAAACAGAG+AGG - chr1_4:57051183-57051202 None:intergenic 35.0%
! TCGCAGTATCGAAAAATTAG+AGG - chr1_4:57051217-57051236 None:intergenic 35.0%
CTGGCAAAATGTTTAATGTG+AGG - chr1_4:57051242-57051261 None:intergenic 35.0%
GGAAAAAATCTGAGGGTAAA+AGG - chr1_4:57051314-57051333 None:intergenic 35.0%
AATTGACAATGCTGAGATTG+TGG + chr1_4:57051501-57051520 Msa0172100:intron 35.0%
!! AACTTTGATTTGCAACGTTG+TGG - chr1_4:57051628-57051647 None:intergenic 35.0%
! CAAGTAGATTATTGCTGTTG+CGG + chr1_4:57051805-57051824 Msa0172100:intron 35.0%
! ATTATTGCTGTTGCGGTATT+TGG + chr1_4:57051812-57051831 Msa0172100:intron 35.0%
!! TTTTTAGGGATTGGATTGTC+GGG + chr1_4:57051876-57051895 Msa0172100:intron 35.0%
TTAGTATCGCCAGTTTCTAT+TGG + chr1_4:57051915-57051934 Msa0172100:CDS 35.0%
TACTAATCCAAGGGCAATCA+AGG + chr1_4:57043693-57043712 Msa0172100:CDS 40.0%
TCTCCATCATGACAACTTAC+TGG - chr1_4:57044127-57044146 None:intergenic 40.0%
CTTGGTAGATATAGACAACC+AGG + chr1_4:57044168-57044187 Msa0172100:CDS 40.0%
AGTTGTCAGCTGATAAAACC+TGG - chr1_4:57044189-57044208 None:intergenic 40.0%
! ACCTCCCAAGACTTTTAAAC+AGG + chr1_4:57044243-57044262 Msa0172100:CDS 40.0%
TCCTGTTTAAAAGTCTTGGG+AGG - chr1_4:57044247-57044266 None:intergenic 40.0%
TGAAACCCTCTCAAATTTCC+AGG + chr1_4:57044272-57044291 Msa0172100:CDS 40.0%
TCTTGCCTGGAAATTTGAGA+GGG - chr1_4:57044280-57044299 None:intergenic 40.0%
ATCTTGCCTGGAAATTTGAG+AGG - chr1_4:57044281-57044300 None:intergenic 40.0%
AGATAGAAAGATCTATCCCG+GGG + chr1_4:57044342-57044361 Msa0172100:CDS 40.0%
TCTGTTTCGACAAGTTGCAA+TGG + chr1_4:57044496-57044515 Msa0172100:CDS 40.0%
AGAAAAACAGGAGACCTTTC+AGG - chr1_4:57044604-57044623 None:intergenic 40.0%
ATCCTACCATTCATTCAGAC+AGG - chr1_4:57044636-57044655 None:intergenic 40.0%
GAATGGTAGGATACTAGTAG+TGG + chr1_4:57044644-57044663 Msa0172100:intron 40.0%
!! TGTCAGAACTGCTCACTTTT+TGG - chr1_4:57044745-57044764 None:intergenic 40.0%
!! TCCATTGGAAGCATTTAGTG+AGG - chr1_4:57044922-57044941 None:intergenic 40.0%
AATGACCTGCAGATTTCCAT+TGG - chr1_4:57044937-57044956 None:intergenic 40.0%
TTAGCCATCCTTCTATTCAG+AGG + chr1_4:57044978-57044997 Msa0172100:CDS 40.0%
TCTGTTTCGACAAGTTGCAA+TGG + chr1_4:57044496-57044515 Msa0172100:CDS 40.0%
AGAAAAACAGGAGACCTTTC+AGG - chr1_4:57044604-57044623 None:intergenic 40.0%
GAATGGTAGGATACTAGTAG+TGG + chr1_4:57044644-57044663 Msa0172100:intron 40.0%
AGATCCTGAAATCAGTTGGT+TGG + chr1_4:57045244-57045263 Msa0172100:intron 40.0%
TGTCAGAATTGCTCACTTTC+TGG - chr1_4:57045321-57045340 None:intergenic 40.0%
!! TATTGGTTCTTCTTCACCCT+TGG + chr1_4:57045618-57045637 Msa0172100:CDS 40.0%
! ATTGGTTCTTCTTCACCCTT+GGG + chr1_4:57045619-57045638 Msa0172100:CDS 40.0%
ATCAAGGCAAACTCTTTCTG+AGG + chr1_4:57045708-57045727 Msa0172100:CDS 40.0%
TATTTCACTTGCTCGGATTG+CGG + chr1_4:57045879-57045898 Msa0172100:CDS 40.0%
GTGTTTGCTTACACTTCACA+AGG + chr1_4:57045982-57046001 Msa0172100:CDS 40.0%
TTTGACAGATTGCATGTCCA+TGG + chr1_4:57046023-57046042 Msa0172100:CDS 40.0%
AGATTGCATGTCCATGGTAA+AGG + chr1_4:57046029-57046048 Msa0172100:CDS 40.0%
ACCAAACCTGAATCATGCAA+GGG + chr1_4:57046114-57046133 Msa0172100:CDS 40.0%
! GGAAGTTTATAAAGGAGTGC+TGG + chr1_4:57046148-57046167 Msa0172100:CDS 40.0%
!! AGTTTATAAAGGAGTGCTGG+AGG + chr1_4:57046151-57046170 Msa0172100:CDS 40.0%
AGGTTTAAGCCGTAAATTGC+AGG + chr1_4:57046218-57046237 Msa0172100:CDS 40.0%
GTTCTTGACTCAAGAAGGAA+AGG + chr1_4:57046708-57046727 Msa0172100:CDS 40.0%
AACACTAGAAGATTTGCCCA+AGG + chr1_4:57046744-57046763 Msa0172100:CDS 40.0%
ACACTAGAAGATTTGCCCAA+GGG + chr1_4:57046745-57046764 Msa0172100:CDS 40.0%
TCCTTTGTCTGTGAATATGC+AGG + chr1_4:57046769-57046788 Msa0172100:CDS 40.0%
CCTTTGTCTGTGAATATGCA+GGG + chr1_4:57046770-57046789 Msa0172100:CDS 40.0%
CTTTGTCTGTGAATATGCAG+GGG + chr1_4:57046771-57046790 Msa0172100:CDS 40.0%
TGTAACACTTGATGCAGACT+GGG + chr1_4:57046864-57046883 Msa0172100:CDS 40.0%
AGTGGGATTAAAGGATGAAG+AGG + chr1_4:57046894-57046913 Msa0172100:CDS 40.0%
TGCTTGGATGCAACACATAA+TGG + chr1_4:57046922-57046941 Msa0172100:CDS 40.0%
GCTTGGATGCAACACATAAT+GGG + chr1_4:57046923-57046942 Msa0172100:CDS 40.0%
!! GTGATTGAGTTGGCTAATTC+AGG - chr1_4:57047040-57047059 None:intergenic 40.0%
TAGACTTCGGTACAAGTGAT+GGG - chr1_4:57047467-57047486 None:intergenic 40.0%
TGCAAAACGGTACAAGTGAT+GGG - chr1_4:57047545-57047564 None:intergenic 40.0%
ATGCAAAACGGTACAAGTGA+TGG - chr1_4:57047546-57047565 None:intergenic 40.0%
! ACACAACAGCAAAAGCGTAA+AGG - chr1_4:57047624-57047643 None:intergenic 40.0%
!!! ATTTTTTTTGGTGGTGTCCG+GGG - chr1_4:57047889-57047908 None:intergenic 40.0%
!!! GATTTTTTTTGGTGGTGTCC+GGG - chr1_4:57047890-57047909 None:intergenic 40.0%
AAATCAATGGAGGACAGTGA+AGG + chr1_4:57047905-57047924 Msa0172100:intron 40.0%
AAGGGGAACTATTGGAATGT+AGG - chr1_4:57048236-57048255 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG + chr1_4:57048301-57048320 Msa0172100:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr1_4:57048302-57048321 Msa0172100:intron 40.0%
GTGACCCAGATTTAATGTCA+CGG - chr1_4:57048407-57048426 None:intergenic 40.0%
CACAACACATACAACACATC+TGG - chr1_4:57048355-57048374 None:intergenic 40.0%
GATGTGTTGTATGTGTTGTG+TGG + chr1_4:57048355-57048374 Msa0172100:intron 40.0%
GTGACCCAGATTTAATGTCA+CGG + chr1_4:57048407-57048426 Msa0172100:intron 40.0%
GTCACCGTGACATTAAATCT+GGG - chr1_4:57048302-57048321 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG - chr1_4:57048301-57048320 None:intergenic 40.0%
!! ATTAAGAAGGGGAAGCACTT+GGG - chr1_4:57048446-57048465 None:intergenic 40.0%
TTGGCAAGTTTACTAGAGGA+GGG - chr1_4:57048482-57048501 None:intergenic 40.0%
TTTGGCAAGTTTACTAGAGG+AGG - chr1_4:57048483-57048502 None:intergenic 40.0%
! TTTTCACATTAGACAACGCC+TGG + chr1_4:57048516-57048535 Msa0172100:intron 40.0%
ACATACTAAGAGGAATGTGG+AGG - chr1_4:57048552-57048571 None:intergenic 40.0%
ACCAACAGAATGCACAATCA+TGG + chr1_4:57048829-57048848 Msa0172100:intron 40.0%
TCCATGATTGTGCATTCTGT+TGG - chr1_4:57048833-57048852 None:intergenic 40.0%
TACAATTCCCTCAGAATTGC+AGG - chr1_4:57048980-57048999 None:intergenic 40.0%
ATGCTTCAATAGGATGGGTA+TGG - chr1_4:57049387-57049406 None:intergenic 40.0%
TCCTCAAATGTGAGACTCTA+TGG + chr1_4:57049928-57049947 Msa0172100:intron 40.0%
!! TTGAACAACCTTGGTGTCTA+AGG - chr1_4:57050039-57050058 None:intergenic 40.0%
GTCTTAACTCTACGGTTCTT+TGG + chr1_4:57050078-57050097 Msa0172100:intron 40.0%
CTTAACTCTACGGTTCTTTG+GGG + chr1_4:57050080-57050099 Msa0172100:intron 40.0%
! AAGAGTGTGCCTTTGTAATC+TGG + chr1_4:57050103-57050122 Msa0172100:intron 40.0%
! TAATCTGGAGTTTGATTGGG+AGG + chr1_4:57050118-57050137 Msa0172100:intron 40.0%
!! GATTTGGTGGATCAACACAT+TGG + chr1_4:57050246-57050265 Msa0172100:intron 40.0%
! GTTTTCAAAACTCACTCGTG+TGG - chr1_4:57050282-57050301 None:intergenic 40.0%
GGAACTCACCTAATCAATTC+TGG + chr1_4:57050457-57050476 Msa0172100:intron 40.0%
GAATGTTTGAGCAAGGAACT+TGG - chr1_4:57050491-57050510 None:intergenic 40.0%
!!! GGTTTTGGAATGTTTGAGCA+AGG - chr1_4:57050498-57050517 None:intergenic 40.0%
GCAACAAGTTTGAGTGGTAT+GGG - chr1_4:57050548-57050567 None:intergenic 40.0%
AGCAACAAGTTTGAGTGGTA+TGG - chr1_4:57050549-57050568 None:intergenic 40.0%
GAAAGAGCAACAAGTTTGAG+TGG - chr1_4:57050554-57050573 None:intergenic 40.0%
CTCAAATGGAGAGAAGTTCA+TGG - chr1_4:57050655-57050674 None:intergenic 40.0%
TCTGAGGGTAAAAGGAGTAA+AGG - chr1_4:57051306-57051325 None:intergenic 40.0%
CATGGAGGGAAAAAATCTGA+GGG - chr1_4:57051321-57051340 None:intergenic 40.0%
ACATGGAGGGAAAAAATCTG+AGG - chr1_4:57051322-57051341 None:intergenic 40.0%
AGAGTTTCGAAGAACATGGA+GGG - chr1_4:57051335-57051354 None:intergenic 40.0%
TTCGAGAGTTTCGAAGAACA+TGG - chr1_4:57051339-57051358 None:intergenic 40.0%
TTGTGGAATCTCTTCCCTTA+AGG + chr1_4:57051518-57051537 Msa0172100:intron 40.0%
AGTGACAAACACCACCTTAA+GGG - chr1_4:57051535-57051554 None:intergenic 40.0%
AAGTGACAAACACCACCTTA+AGG - chr1_4:57051536-57051555 None:intergenic 40.0%
CCATTAGATTCAACCTCACT+TGG - chr1_4:57051589-57051608 None:intergenic 40.0%
CCAAGTGAGGTTGAATCTAA+TGG + chr1_4:57051586-57051605 Msa0172100:intron 40.0%
!! TTTTAGGGATTGGATTGTCG+GGG + chr1_4:57051877-57051896 Msa0172100:intron 40.0%
CCAGTTTCTATTGGCCAAAA+GGG + chr1_4:57051924-57051943 Msa0172100:CDS 40.0%
! TTGGATTCTTGAAGCCCTTT+TGG - chr1_4:57051941-57051960 None:intergenic 40.0%
AAAAGGGCTTCAAGAATCCA+AGG + chr1_4:57051940-57051959 Msa0172100:CDS 40.0%
TGCACAGAATGTGAAGGTAA+AGG + chr1_4:57051987-57052006 Msa0172100:CDS 40.0%
ACAGAATGTGAAGGTAAAGG+AGG + chr1_4:57051990-57052009 Msa0172100:CDS 40.0%
CAGAATGTGAAGGTAAAGGA+GGG + chr1_4:57051991-57052010 Msa0172100:CDS 40.0%
AGAATGTGAAGGTAAAGGAG+GGG + chr1_4:57051992-57052011 Msa0172100:CDS 40.0%
!! GATTGCCCTTGGATTAGTAG+TGG - chr1_4:57043692-57043711 None:intergenic 45.0%
CAAGGCCCTTAATGCTATGA+AGG + chr1_4:57043711-57043730 Msa0172100:CDS 45.0%
GCTCCAGTAAGTTGTCATGA+TGG + chr1_4:57044121-57044140 Msa0172100:CDS 45.0%
GTGTTGTCTGTAGAAGACAC+TGG + chr1_4:57044217-57044236 Msa0172100:CDS 45.0%
TGTGGGATTCATATCTTGCC+TGG - chr1_4:57044293-57044312 None:intergenic 45.0%
CTCTGAATAGAAGGATGGCT+AGG - chr1_4:57044409-57044428 None:intergenic 45.0%
CTAGCCATCCTTCTATTCAG+AGG + chr1_4:57044407-57044426 Msa0172100:CDS 45.0%
ACAGATCCGGGATGAAACTT+AGG - chr1_4:57044481-57044500 None:intergenic 45.0%
CAACTTGTCGAAACAGATCC+GGG - chr1_4:57044493-57044512 None:intergenic 45.0%
GCAACTTGTCGAAACAGATC+CGG - chr1_4:57044494-57044513 None:intergenic 45.0%
GTCCTGTCTGAATGAATGGT+AGG + chr1_4:57044631-57044650 Msa0172100:intron 45.0%
GCCTCACTAAATGCTTCCAA+TGG + chr1_4:57044918-57044937 Msa0172100:intron 45.0%
TGCTTCCAATGGAAATCTGC+AGG + chr1_4:57044929-57044948 Msa0172100:intron 45.0%
GGATGGCTAAGTCCATCAAT+TGG - chr1_4:57044968-57044987 None:intergenic 45.0%
ACAGATCCGGGATGAAACTT+AGG - chr1_4:57044481-57044500 None:intergenic 45.0%
CAACTTGTCGAAACAGATCC+GGG - chr1_4:57044493-57044512 None:intergenic 45.0%
GCAACTTGTCGAAACAGATC+CGG - chr1_4:57044494-57044513 None:intergenic 45.0%
GTGGAGATCCTGAAATCAGT+TGG + chr1_4:57045240-57045259 Msa0172100:intron 45.0%
GGCTCACTAAATGCTTCCAA+TGG + chr1_4:57045490-57045509 Msa0172100:intron 45.0%
TGTGATGCTGCATTAAGGAC+TGG + chr1_4:57045664-57045683 Msa0172100:CDS 45.0%
AAGACAGTCGCCTGAACAAT+CGG - chr1_4:57045920-57045939 None:intergenic 45.0%
! GTTTCTTGAGAGCATGCACA+AGG - chr1_4:57045955-57045974 None:intergenic 45.0%
TGTGCATGCTCTCAAGAAAC+TGG + chr1_4:57045955-57045974 Msa0172100:CDS 45.0%
!! GTAAAGAGTGCCCAATTGAG+AGG + chr1_4:57046079-57046098 Msa0172100:CDS 45.0%
GACCAAACCTGAATCATGCA+AGG + chr1_4:57046113-57046132 Msa0172100:CDS 45.0%
! TCCCTTGCATGATTCAGGTT+TGG - chr1_4:57046118-57046137 None:intergenic 45.0%
AGATGTCCCTTGCATGATTC+AGG - chr1_4:57046123-57046142 None:intergenic 45.0%
TGAATCATGCAAGGGACATC+TGG + chr1_4:57046122-57046141 Msa0172100:CDS 45.0%
GTGACATGCAGTGTGGAAAT+CGG + chr1_4:57046184-57046203 Msa0172100:CDS 45.0%
TGACATGCAGTGTGGAAATC+GGG + chr1_4:57046185-57046204 Msa0172100:CDS 45.0%
CAGGTGTTCTTGACTCAAGA+AGG + chr1_4:57046703-57046722 Msa0172100:intron 45.0%
TCACAGACAAAGGATCCCTT+GGG - chr1_4:57046763-57046782 None:intergenic 45.0%
TTCACAGACAAAGGATCCCT+TGG - chr1_4:57046764-57046783 None:intergenic 45.0%
CCCTGCATATTCACAGACAA+AGG - chr1_4:57046773-57046792 None:intergenic 45.0%
GACAGGATTGTGCATAGTAC+CGG + chr1_4:57046820-57046839 Msa0172100:CDS 45.0%
CAGTCTGCATCAAGTGTTAC+AGG - chr1_4:57046865-57046884 None:intergenic 45.0%
CTGTAACACTTGATGCAGAC+TGG + chr1_4:57046863-57046882 Msa0172100:CDS 45.0%
GTAACACTTGATGCAGACTG+GGG + chr1_4:57046865-57046884 Msa0172100:CDS 45.0%
!! GGATGAAGAGGCATTATGCT+TGG + chr1_4:57046906-57046925 Msa0172100:CDS 45.0%
GTAGACTTCGGTACAAGTGA+TGG - chr1_4:57047468-57047487 None:intergenic 45.0%
ACATGATAATAGTGGCGGTC+AGG - chr1_4:57047721-57047740 None:intergenic 45.0%
AAGATCCGGGATTTAAACCC+CGG + chr1_4:57047869-57047888 Msa0172100:intron 45.0%
! CAAAGATGTGAGAGCATACG+AGG + chr1_4:57047995-57048014 Msa0172100:CDS 45.0%
!! TTGTTCTGAGGAACTTACCC+AGG - chr1_4:57048027-57048046 None:intergenic 45.0%
CAGCTCAGCTCCTTCTTAAT+GGG + chr1_4:57048258-57048277 Msa0172100:intron 45.0%
!! CACAAAGGTGTTGTGTTGTG+TGG + chr1_4:57048328-57048347 Msa0172100:intron 45.0%
CACATTGCCACACAACATCT+GGG - chr1_4:57048381-57048400 None:intergenic 45.0%
ACACATTGCCACACAACATC+TGG - chr1_4:57048382-57048401 None:intergenic 45.0%
!! CATTAAGAAGGGGAAGCACT+TGG - chr1_4:57048447-57048466 None:intergenic 45.0%
ATGCAAAGCCTGCAATTCTG+AGG + chr1_4:57048969-57048988 Msa0172100:intron 45.0%
TGCAAAGCCTGCAATTCTGA+GGG + chr1_4:57048970-57048989 Msa0172100:intron 45.0%
GCCATAGAGTCTCACATTTG+AGG - chr1_4:57049932-57049951 None:intergenic 45.0%
!! AGAGTATGGTTCGACTTGGT+GGG - chr1_4:57049988-57050007 None:intergenic 45.0%
! ATCGAGAGTATGGTTCGACT+TGG - chr1_4:57049992-57050011 None:intergenic 45.0%
CGTAAACGATTCGTCCTAAG+AGG + chr1_4:57050193-57050212 Msa0172100:intron 45.0%
GTGGTTAACGATCACCTCTT+AGG - chr1_4:57050210-57050229 None:intergenic 45.0%
CATTCCAAAACCCTAGCTCA+TGG + chr1_4:57050506-57050525 Msa0172100:intron 45.0%
AAGCAAGAGACCATGAGCTA+GGG - chr1_4:57050519-57050538 None:intergenic 45.0%
AGTTTGAGTGGTATGGGCAA+AGG - chr1_4:57050542-57050561 None:intergenic 45.0%
TACCAACTGAGCTTAGCTCA+CGG - chr1_4:57050894-57050913 None:intergenic 45.0%
ATGTGGAAACAGAGAGGAGT+GGG - chr1_4:57051177-57051196 None:intergenic 45.0%
GAGAGTTTCGAAGAACATGG+AGG - chr1_4:57051336-57051355 None:intergenic 45.0%
TGGAATCTCTTCCCTTAAGG+TGG + chr1_4:57051521-57051540 Msa0172100:intron 45.0%
GCCAGTTTCTATTGGCCAAA+AGG + chr1_4:57051923-57051942 Msa0172100:CDS 45.0%
! CCCTTTTGGCCAATAGAAAC+TGG - chr1_4:57051927-57051946 None:intergenic 45.0%
ACATTCTGTGCAGTAGGATG+TGG - chr1_4:57051979-57051998 None:intergenic 45.0%
TCCTACTGCACAGAATGTGA+AGG + chr1_4:57051981-57052000 Msa0172100:CDS 45.0%
ACCTTCACATTCTGTGCAGT+AGG - chr1_4:57051985-57052004 None:intergenic 45.0%
TTAAGGGCCTTGATTGCCCT+TGG - chr1_4:57043703-57043722 None:intergenic 50.0%
GAAGGACTTAGGAATCTCGG+AGG + chr1_4:57043729-57043748 Msa0172100:CDS 50.0%
AATGCCTGCGAACTGGTTGT+GGG - chr1_4:57044310-57044329 None:intergenic 50.0%
AACCAGTTCGCAGGCATTCA+TGG + chr1_4:57044312-57044331 Msa0172100:CDS 50.0%
ATCCATGAATGCCTGCGAAC+TGG - chr1_4:57044317-57044336 None:intergenic 50.0%
GGATGGCTAGGTCCATCAAT+TGG - chr1_4:57044397-57044416 None:intergenic 50.0%
GTGGAGATCCTGAAATCAGC+TGG + chr1_4:57044663-57044682 Msa0172100:intron 50.0%
GATTGCTGCTCCGATTGTTC+AGG + chr1_4:57045907-57045926 Msa0172100:CDS 50.0%
GCATGCTCTCAAGAAACTGG+TGG + chr1_4:57045958-57045977 Msa0172100:CDS 50.0%
ATGCTGGGGTTCCTTTACCA+TGG - chr1_4:57046043-57046062 None:intergenic 50.0%
CATGCAAGGGACATCTGGTT+AGG + chr1_4:57046127-57046146 Msa0172100:CDS 50.0%
!! AAGGAGTGCTGGAGGAAATG+TGG + chr1_4:57046159-57046178 Msa0172100:CDS 50.0%
TGTGGATGTGACATGCAGTG+TGG + chr1_4:57046177-57046196 Msa0172100:CDS 50.0%
TGACTCAAGAAGGAAAGGGC+TGG + chr1_4:57046713-57046732 Msa0172100:CDS 50.0%
GACTCAAGAAGGAAAGGGCT+GGG + chr1_4:57046714-57046733 Msa0172100:CDS 50.0%
ACTCAAGAAGGAAAGGGCTG+GGG + chr1_4:57046715-57046734 Msa0172100:CDS 50.0%
ACTTGATGCAGACTGGGGTT+CGG + chr1_4:57046870-57046889 Msa0172100:CDS 50.0%
GGGTTCGGAAGTGGGATTAA+AGG + chr1_4:57046885-57046904 Msa0172100:CDS 50.0%
TCAGGTGTCTCCACTTCAAC+AGG - chr1_4:57047703-57047722 None:intergenic 50.0%
AGCATACGAGGAGTTGACCT+GGG + chr1_4:57048007-57048026 Msa0172100:CDS 50.0%
CCATTAAGAAGGAGCTGAGC+TGG - chr1_4:57048260-57048279 None:intergenic 50.0%
CCAGCTCAGCTCCTTCTTAA+TGG + chr1_4:57048257-57048276 Msa0172100:intron 50.0%
GCAAGTTTACTAGAGGAGGG+AGG - chr1_4:57048479-57048498 None:intergenic 50.0%
AGGAATGTGGAGGCTGACAT+TGG - chr1_4:57048542-57048561 None:intergenic 50.0%
GCGGAAGTGGTTCTTGGTAT+TGG - chr1_4:57049961-57049980 None:intergenic 50.0%
!! GAGAGTATGGTTCGACTTGG+TGG - chr1_4:57049989-57050008 None:intergenic 50.0%
TGGTGAAGCCTTAGACACCA+AGG + chr1_4:57050028-57050047 Msa0172100:intron 50.0%
! GAGACCATGAGCTAGGGTTT+TGG - chr1_4:57050513-57050532 None:intergenic 50.0%
GAAGCAAGAGACCATGAGCT+AGG - chr1_4:57050520-57050539 None:intergenic 50.0%
TTCCGTGAGCTAAGCTCAGT+TGG + chr1_4:57050889-57050908 Msa0172100:intron 50.0%
GATGTGGAAACAGAGAGGAG+TGG - chr1_4:57051178-57051197 None:intergenic 50.0%
GCGGTATTTGGCTGCCATAT+AGG + chr1_4:57051824-57051843 Msa0172100:intron 50.0%
AGGGCTTCAAGAATCCAAGG+AGG + chr1_4:57051943-57051962 Msa0172100:CDS 50.0%
TCTGTGCAGTAGGATGTGGT+GGG - chr1_4:57051975-57051994 None:intergenic 50.0%
TTCTGTGCAGTAGGATGTGG+TGG - chr1_4:57051976-57051995 None:intergenic 50.0%
CTTAGGAATCTCGGAGGTCG+AGG + chr1_4:57043735-57043754 Msa0172100:CDS 55.0%
GAATCCCACAACCAGTTCGC+AGG + chr1_4:57044303-57044322 Msa0172100:CDS 55.0%
GAATGCCTGCGAACTGGTTG+TGG - chr1_4:57044311-57044330 None:intergenic 55.0%
ACTTGCTCGGATTGCGGATG+AGG + chr1_4:57045885-57045904 Msa0172100:CDS 55.0%
GGAAATCGGGTAGTGCAACG+AGG + chr1_4:57046198-57046217 Msa0172100:CDS 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr1_4:57047826-57047845 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr1_4:57047823-57047842 Msa0172100:intron 55.0%
GGTGTCCGGGGTTTAAATCC+CGG - chr1_4:57047877-57047896 None:intergenic 55.0%
GAGCATACGAGGAGTTGACC+TGG + chr1_4:57048006-57048025 Msa0172100:CDS 55.0%
GAGCTGGCAAGGGGAACTAT+TGG - chr1_4:57048244-57048263 None:intergenic 55.0%
AGAAGGAGCTGAGCTGGCAA+GGG - chr1_4:57048254-57048273 None:intergenic 55.0%
AAGAAGGAGCTGAGCTGGCA+AGG - chr1_4:57048255-57048274 None:intergenic 55.0%
TGTGTGGCCCAGATGTTGTG+TGG + chr1_4:57048371-57048390 Msa0172100:intron 55.0%
!! GTATGGTTCGACTTGGTGGG+AGG - chr1_4:57049985-57050004 None:intergenic 55.0%
GTGAAGGTAAAGGAGGGGAG+AGG + chr1_4:57051997-57052016 Msa0172100:CDS 55.0%
ACCTGCAGATGATGCTGCCC+CGG - chr1_4:57044362-57044381 None:intergenic 60.0%
TGCAGACTGGGGTTCGGAAG+TGG + chr1_4:57046876-57046895 Msa0172100:CDS 60.0%
GCAGACTGGGGTTCGGAAGT+GGG + chr1_4:57046877-57046896 Msa0172100:CDS 60.0%
GAAGGAGCTGAGCTGGCAAG+GGG - chr1_4:57048253-57048272 None:intergenic 60.0%
TGTGGAGGCTGACATTGGCC+AGG - chr1_4:57048537-57048556 None:intergenic 60.0%
GGAGGAGCGGAAGTGGTTCT+TGG - chr1_4:57049967-57049986 None:intergenic 60.0%
!! GTTCGACTTGGTGGGAGGAG+CGG - chr1_4:57049980-57049999 None:intergenic 60.0%
! GTGGTGGGAGATGACCTCCT+TGG - chr1_4:57051960-57051979 None:intergenic 60.0%
AGGTAAAGGAGGGGAGAGGC+TGG + chr1_4:57052001-57052020 Msa0172100:CDS 60.0%
GGTAAAGGAGGGGAGAGGCT+GGG + chr1_4:57052002-57052021 Msa0172100:CDS 60.0%
CTCGGAGGTCGAGGTGACAC+CGG + chr1_4:57043744-57043763 Msa0172100:CDS 65.0%
CCTGCAGATGATGCTGCCCC+GGG - chr1_4:57044361-57044380 None:intergenic 65.0%
CTTGGTGGGAGGAGCGGAAG+TGG - chr1_4:57049974-57049993 None:intergenic 65.0%
CCCGGGGCAGCATCATCTGC+AGG + chr1_4:57044358-57044377 Msa0172100:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 57043685 57052028 57043685 ID=Msa0172100;Name=Msa0172100
chr1_4 mRNA 57043685 57052028 57043685 ID=Msa0172100-mRNA-1;Parent=Msa0172100;Name=Msa0172100-mRNA-1;_AED=0.13;_eAED=0.17;_QI=0|0.37|0.33|0.88|1|1|9|0|714
chr1_4 exon 57043685 57043897 57043685 ID=Msa0172100-mRNA-1:exon:17378;Parent=Msa0172100-mRNA-1
chr1_4 exon 57044097 57044517 57044097 ID=Msa0172100-mRNA-1:exon:17379;Parent=Msa0172100-mRNA-1
chr1_4 exon 57044951 57045088 57044951 ID=Msa0172100-mRNA-1:exon:17380;Parent=Msa0172100-mRNA-1
chr1_4 exon 57045491 57046239 57045491 ID=Msa0172100-mRNA-1:exon:17381;Parent=Msa0172100-mRNA-1
chr1_4 exon 57046706 57046971 57046706 ID=Msa0172100-mRNA-1:exon:17382;Parent=Msa0172100-mRNA-1
chr1_4 exon 57047672 57047738 57047672 ID=Msa0172100-mRNA-1:exon:17383;Parent=Msa0172100-mRNA-1
chr1_4 exon 57047978 57048028 57047978 ID=Msa0172100-mRNA-1:exon:17384;Parent=Msa0172100-mRNA-1
chr1_4 exon 57049361 57049454 57049361 ID=Msa0172100-mRNA-1:exon:17385;Parent=Msa0172100-mRNA-1
chr1_4 exon 57051883 57052028 57051883 ID=Msa0172100-mRNA-1:exon:17386;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57043685 57043897 57043685 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57044097 57044517 57044097 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57044951 57045088 57044951 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57045491 57046239 57045491 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57046706 57046971 57046706 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57047672 57047738 57047672 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57047978 57048028 57047978 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57049361 57049454 57049361 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
chr1_4 CDS 57051883 57052028 57051883 ID=Msa0172100-mRNA-1:cds;Parent=Msa0172100-mRNA-1
Gene Sequence

>Msa0172100

ATGACCACTACTAATCCAAGGGCAATCAAGGCCCTTAATGCTATGAAGGACTTAGGAATCTCGGAGGTCGAGGTGACACCGGTGTTGAAAAAGTTGTATAAATTGTATGATAAAAAGTGGGAGCTTATTGAAGATGACAATTATCGGACACTTATAGATGCATACTTTGAGTCAAAGGAAGATAAGGCATACTTTGAGTCAAAGGAAGATAAGAAGCAAGAAGATCATAAGAGAAAAGCTCCAGTAAGTTGTCATGATGGAGAGAAACCTAAACAGAAACTTCACTTGGTAGATATAGACAACCAGGTTTTATCAGCTGACAACTCAAGACAAGTGTTGTCTGTAGAAGACACTGGCATACCTCCCAAGACTTTTAAACAGGAAACTATGAAACCCTCTCAAATTTCCAGGCAAGATATGAATCCCACAACCAGTTCGCAGGCATTCATGGATGCTATAGATAGAAAGATCTATCCCGGGGCAGCATCATCTGCAGGTCATTGTAAAGATCCAATTGATGGACCTAGCCATCCTTCTATTCAGAGGAAAAATATGTCAAGTGATCAGAAGATTAAAGTATCAGGAAATGATAAACCTAAGTTTCATCCCGGATCTGTTTCGACAAGTTGCAATGGTCATTGTAAAGATCCAATTGATGGACTTAGCCATCCTTCTATTCAGAGGAAAAATATGTCAAGTGATCAGAAGATTAAAGTATCAGGAAATGATAAACCTAAGTTTCATCCCGGATCTGTTTCGACAAGTTGCAATGGCTCACTAAATGCTTCCAATGGAAATCTTACTGTCAAATCCCTGTCAGATGTGTATCAGAATACACACAAGATAGAAGCTACTCCCACATGCAATAATAACACCAGAACCTGTAAAGGTAATATTGTTATTGGTTCTTCTTCACCCTTGGGAGAAGTTAAATCTTCTTTAAATTGTGATGCTGCATTAAGGACTGGCTTGAATTTAAATCGAAATGGATCAAGGCAAACTCTTTCTGAGGATAAAAAGAAATCCTTTCGATATGTTGAAGACATAACAAAAGGTTCTGAAAACATTCACATATCATTATTAGATGAAACCAACAGTGAGGAATTTCCAAAATTTAATTACATTCCATGTAACACAATGTATCAAAGTGCAAATGTCAATATTTCACTTGCTCGGATTGCGGATGAGGATTGCTGCTCCGATTGTTCAGGCGACTGTCTTTCTTTGTCAATTCCTTGTGCATGCTCTCAAGAAACTGGTGGAGTGTTTGCTTACACTTCACAAGGTTTGTTGAGTGAAAAGTTTTTGACAGATTGCATGTCCATGGTAAAGGAACCCCAGCATCATCATTATGTGTATTGTAAAGAGTGCCCAATTGAGAGGACTAAGAATGAGACCAAACCTGAATCATGCAAGGGACATCTGGTTAGGAAGTTTATAAAGGAGTGCTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGGGTAGTGCAACGAGGTTTAAGCCGTAAATTGCAGGTGTTCTTGACTCAAGAAGGAAAGGGCTGGGGCGTTAGAACACTAGAAGATTTGCCCAAGGGATCCTTTGTCTGTGAATATGCAGGGGAGATTTTAACCAATTCAGAATTATATGACAGGATTGTGCATAGTACCGGCAATGATAGACATACATATCCTGTAACACTTGATGCAGACTGGGGTTCGGAAGTGGGATTAAAGGATGAAGAGGCATTATGCTTGGATGCAACACATAATGGGAATGTTGCAAGATTCATCAATCATAGATGCTTCGATGCAAATCTAATAGACATTCCTGTTGAAGTGGAGACACCTGACCGCCACTATTATCATCTTGCCCTTTTTACAAACAAAGATGTGAGAGCATACGAGGAGTTGACCTGGGATTATGGCATTGACTTTGATGACCATACCCATCCTATTGAAGCATTTCAATGTTGTTGTGGAAGCGCTTTCTGCCGTGATAAGAAACAAAAAGGGATTGGATTGTCGGGGAATTCTTTTGTAAATTTAGTATCGCCAGTTTCTATTGGCCAAAAGGGCTTCAAGAATCCAAGGAGGTCATCTCCCACCACATCCTACTGCACAGAATGTGAAGGTAAAGGAGGGGAGAGGCTGGGTTAA
Protein sequence

>Msa0172100

MTTTNPRAIKALNAMKDLGISEVEVTPVLKKLYKLYDKKWELIEDDNYRTLIDAYFESKEDKAYFESKEDKKQEDHKRKAPVSCHDGEKPKQKLHLVDIDNQVLSADNSRQVLSVEDTGIPPKTFKQETMKPSQISRQDMNPTTSSQAFMDAIDRKIYPGAASSAGHCKDPIDGPSHPSIQRKNMSSDQKIKVSGNDKPKFHPGSVSTSCNGHCKDPIDGLSHPSIQRKNMSSDQKIKVSGNDKPKFHPGSVSTSCNGSLNASNGNLTVKSLSDVYQNTHKIEATPTCNNNTRTCKGNIVIGSSSPLGEVKSSLNCDAALRTGLNLNRNGSRQTLSEDKKKSFRYVEDITKGSENIHISLLDETNSEEFPKFNYIPCNTMYQSANVNISLARIADEDCCSDCSGDCLSLSIPCACSQETGGVFAYTSQGLLSEKFLTDCMSMVKEPQHHHYVYCKECPIERTKNETKPESCKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLSRKLQVFLTQEGKGWGVRTLEDLPKGSFVCEYAGEILTNSELYDRIVHSTGNDRHTYPVTLDADWGSEVGLKDEEALCLDATHNGNVARFINHRCFDANLIDIPVEVETPDRHYYHLALFTNKDVRAYEELTWDYGIDFDDHTHPIEAFQCCCGSAFCRDKKQKGIGLSGNSFVNLVSPVSIGQKGFKNPRRSSPTTSYCTECEGKGGERLG*