AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0094290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0094290 MtrunA17_Chr4g0076161 79.273 275 51 2 1 270 75 348 2.75e-149 431
Msa0094290 MtrunA17_Chr4g0076161 80.909 110 20 1 256 365 190 298 9.62e-52 179
Msa0094290 MtrunA17_Chr6g0463791 73.551 276 64 3 1 270 73 345 4.99e-132 387
Msa0094290 MtrunA17_Chr6g0463791 74.312 109 25 1 257 365 190 295 3.98e-47 167
Msa0094290 MtrunA17_Chr5g0403351 60.227 264 99 1 1 258 72 335 9.87e-110 330
Msa0094290 MtrunA17_Chr5g0403351 49.138 116 53 1 256 365 187 302 1.16e-27 113
Msa0094290 MtrunA17_Chr6g0463611 68.584 226 67 2 1 225 87 309 1.68e-106 315
Msa0094290 MtrunA17_Chr6g0463611 65.179 112 36 1 256 367 203 311 3.75e-44 155
Msa0094290 MtrunA17_Chr5g0403331 55.682 264 111 1 1 258 73 336 7.59e-100 305
Msa0094290 MtrunA17_Chr5g0403331 43.478 115 59 1 257 365 189 303 4.12e-24 103
Msa0094290 MtrunA17_Chr5g0403321 55.056 267 111 2 1 258 72 338 1.59e-94 291
Msa0094290 MtrunA17_Chr5g0403321 44.538 119 57 2 256 365 187 305 1.31e-24 104
Msa0094290 MtrunA17_Chr3g0101761 48.855 262 129 1 1 257 71 332 6.17e-88 274
Msa0094290 MtrunA17_Chr3g0101761 39.474 114 64 1 256 364 186 299 1.38e-20 93.2
Msa0094290 MtrunA17_Chr3g0101821 48.855 262 129 1 1 257 71 332 3.83e-86 269
Msa0094290 MtrunA17_Chr3g0101821 37.719 114 66 1 256 364 186 299 6.80e-20 90.9
Msa0094290 MtrunA17_Chr3g0101751 45.357 280 144 2 1 271 78 357 8.60e-85 266
Msa0094290 MtrunA17_Chr3g0101751 35.088 114 69 1 256 364 193 306 2.63e-17 83.2
Msa0094290 MtrunA17_Chr8g0357431 48.092 262 132 1 1 258 73 334 1.58e-83 263
Msa0094290 MtrunA17_Chr8g0357431 37.168 113 67 1 256 364 188 300 4.34e-16 79.3
Msa0094290 MtrunA17_Chr5g0445441 49.084 273 134 3 1 269 116 387 2.82e-83 263
Msa0094290 MtrunA17_Chr5g0445441 38.739 111 64 3 256 364 231 339 1.67e-16 80.9
Msa0094290 MtrunA17_Chr8g0357421 46.565 262 135 2 1 258 73 333 3.86e-83 261
Msa0094290 MtrunA17_Chr8g0357421 34.821 112 70 1 256 364 188 299 2.08e-17 83.6
Msa0094290 MtrunA17_Chr1g0162811 49.808 261 126 3 1 257 73 332 1.75e-82 260
Msa0094290 MtrunA17_Chr1g0162811 37.719 114 64 4 256 364 188 299 1.80e-12 68.6
Msa0094290 MtrunA17_Chr3g0101731 44.803 279 146 2 1 271 72 350 1.35e-81 258
Msa0094290 MtrunA17_Chr3g0101731 38.053 113 66 1 256 364 187 299 1.13e-16 81.3
Msa0094290 MtrunA17_Chr3g0101691 47.368 285 140 4 1 275 74 358 2.56e-81 257
Msa0094290 MtrunA17_Chr3g0101691 38.261 115 65 3 256 364 189 303 1.55e-17 84.0
Msa0094290 MtrunA17_Chr8g0361471 48.106 264 131 2 1 258 70 333 4.79e-81 256
Msa0094290 MtrunA17_Chr8g0361471 35.652 115 68 2 256 364 185 299 1.49e-14 74.7
Msa0094290 MtrunA17_Chr5g0445461 44.863 292 148 4 1 280 75 365 6.53e-81 256
Msa0094290 MtrunA17_Chr5g0445461 35.455 110 69 2 256 364 190 298 7.91e-16 78.6
Msa0094290 MtrunA17_Chr1g0162801 47.909 263 130 3 1 257 73 334 8.51e-81 256
Msa0094290 MtrunA17_Chr1g0162801 34.783 115 68 3 256 364 188 301 3.13e-13 70.9
Msa0094290 MtrunA17_Chr5g0445451 48.062 258 132 2 1 257 75 331 1.84e-80 254
Msa0094290 MtrunA17_Chr5g0445451 36.937 111 66 3 256 364 190 298 2.96e-17 83.2
Msa0094290 MtrunA17_Chr3g0101741 42.086 278 153 3 1 271 1 277 2.18e-80 252
Msa0094290 MtrunA17_Chr3g0101741 33.036 112 71 2 256 364 116 226 1.32e-16 80.9
Msa0094290 MtrunA17_Chr3g0101631 48.485 264 123 3 1 258 72 328 4.18e-80 253
Msa0094290 MtrunA17_Chr3g0101631 33.913 115 63 3 256 364 187 294 1.47e-12 68.6
Msa0094290 MtrunA17_Chr3g0101721 46.183 262 136 2 1 257 73 334 4.71e-80 254
Msa0094290 MtrunA17_Chr3g0101721 38.596 114 65 2 256 364 188 301 5.35e-19 88.2
Msa0094290 MtrunA17_Chr5g0431641 48.263 259 132 2 1 258 75 332 6.38e-80 253
Msa0094290 MtrunA17_Chr5g0431641 36.036 111 67 3 256 364 190 298 2.27e-13 71.2
Msa0094290 MtrunA17_Chr3g0101611 47.909 263 132 1 1 258 73 335 1.25e-79 253
Msa0094290 MtrunA17_Chr3g0101611 38.053 113 63 2 256 362 188 299 1.15e-16 81.3
Msa0094290 MtrunA17_Chr3g0101711 48.485 264 130 4 1 258 73 336 2.05e-79 252
Msa0094290 MtrunA17_Chr3g0101711 36.207 116 68 3 256 365 188 303 2.79e-17 83.2
Msa0094290 MtrunA17_Chr3g0101661 45.775 284 145 3 1 275 74 357 2.28e-79 252
Msa0094290 MtrunA17_Chr3g0101661 35.652 115 69 2 256 365 189 303 1.42e-16 80.9
Msa0094290 MtrunA17_Chr3g0101701 49.430 263 127 3 1 257 74 336 9.72e-79 250
Msa0094290 MtrunA17_Chr3g0101701 37.391 115 66 3 256 364 189 303 5.72e-16 79.3
Msa0094290 MtrunA17_Chr5g0445531 46.693 257 136 1 1 257 75 330 3.70e-78 248
Msa0094290 MtrunA17_Chr5g0445531 36.697 109 68 1 256 364 190 297 4.45e-18 85.5
Msa0094290 MtrunA17_Chr6g0465511 46.212 264 136 2 1 258 70 333 9.10e-78 248
Msa0094290 MtrunA17_Chr6g0465511 35.652 115 68 2 256 364 185 299 3.83e-14 73.6
Msa0094290 MtrunA17_Chr3g0101571 46.743 261 136 1 1 258 71 331 1.10e-77 247
Msa0094290 MtrunA17_Chr3g0101571 32.143 112 73 1 256 364 186 297 1.02e-14 75.5
Msa0094290 MtrunA17_Chr3g0101671 46.591 264 135 2 1 258 74 337 2.10e-77 247
Msa0094290 MtrunA17_Chr3g0101671 35.652 115 68 2 256 364 189 303 4.58e-15 76.3
Msa0094290 MtrunA17_Chr6g0466331 46.212 264 136 2 1 258 70 333 2.51e-77 246
Msa0094290 MtrunA17_Chr6g0466331 35.652 115 68 2 256 364 185 299 4.04e-14 73.6
Msa0094290 MtrunA17_Chr3g0101801 44.106 263 140 2 1 257 78 339 4.01e-77 246
Msa0094290 MtrunA17_Chr3g0101801 37.391 115 65 2 256 364 193 306 9.22e-19 87.4
Msa0094290 MtrunA17_Chr3g0101581 46.008 263 137 2 1 258 72 334 1.80e-76 244
Msa0094290 MtrunA17_Chr3g0101581 32.456 114 72 2 256 364 187 300 1.79e-13 71.6
Msa0094290 MtrunA17_Chr1g0167321 49.049 263 127 4 1 257 70 331 2.50e-75 241
Msa0094290 MtrunA17_Chr1g0167321 42.241 116 58 5 256 364 185 298 2.25e-14 74.3
Msa0094290 MtrunA17_Chr3g0101651 46.591 264 135 3 1 258 74 337 5.66e-75 240
Msa0094290 MtrunA17_Chr3g0101651 36.207 116 68 3 256 365 189 304 3.38e-15 76.6
Msa0094290 MtrunA17_Chr5g0445381 47.876 259 133 2 1 258 106 363 7.72e-75 241
Msa0094290 MtrunA17_Chr5g0445381 37.838 111 65 3 256 364 221 329 2.24e-15 77.4
Msa0094290 MtrunA17_Chr3g0101831 45.977 261 137 2 1 257 73 333 1.10e-74 239
Msa0094290 MtrunA17_Chr3g0101831 35.398 113 69 1 256 364 188 300 1.30e-14 75.1
Msa0094290 MtrunA17_Chr3g0101811 42.182 275 141 4 1 257 73 347 2.09e-74 239
Msa0094290 MtrunA17_Chr3g0101811 35.652 115 70 1 256 366 188 302 3.59e-17 82.8
Msa0094290 MtrunA17_Chr5g0431671 45.174 259 140 2 1 258 76 333 2.75e-74 238
Msa0094290 MtrunA17_Chr5g0431671 36.937 111 66 3 256 364 191 299 1.39e-14 75.1
Msa0094290 MtrunA17_Chr3g0101601 46.591 264 128 2 1 258 72 328 4.43e-74 238
Msa0094290 MtrunA17_Chr3g0101601 36.522 115 60 4 256 364 187 294 1.11e-12 68.9
Msa0094290 MtrunA17_Chr4g0024771 43.590 273 149 3 1 269 75 346 2.65e-73 236
Msa0094290 MtrunA17_Chr4g0024771 33.636 110 71 2 256 364 190 298 3.03e-14 73.9
Msa0094290 MtrunA17_Chr3g0101621 46.360 261 130 2 1 258 69 322 3.06e-73 235
Msa0094290 MtrunA17_Chr3g0101621 36.607 112 61 3 256 364 184 288 1.36e-12 68.9
Msa0094290 MtrunA17_Chr4g0020041 44.275 262 140 3 1 257 73 333 4.21e-73 236
Msa0094290 MtrunA17_Chr4g0020041 31.579 114 72 3 256 364 188 300 8.79e-11 63.2
Msa0094290 MtrunA17_Chr3g0116681 44.697 264 135 3 1 257 75 334 2.70e-72 233
Msa0094290 MtrunA17_Chr3g0116681 43.011 93 49 2 273 364 212 301 4.81e-16 79.3
Msa0094290 MtrunA17_Chr2g0280261 46.209 277 137 4 1 270 70 341 1.70e-69 226
Msa0094290 MtrunA17_Chr5g0445421 46.768 263 109 5 1 258 149 385 4.03e-69 226
Msa0094290 MtrunA17_Chr5g0446161 43.273 275 146 4 1 269 77 347 1.18e-65 216
Msa0094290 MtrunA17_Chr6g0463801 41.971 274 153 3 1 270 73 344 3.98e-65 214
Msa0094290 MtrunA17_Chr5g0445751 44.737 228 125 1 1 227 80 307 4.70e-64 206
Msa0094290 MtrunA17_Chr5g0445751 41.818 110 63 1 256 364 195 304 3.01e-17 81.6
Msa0094290 MtrunA17_Chr5g0446151 42.029 276 149 4 1 269 77 348 4.79e-63 209
Msa0094290 MtrunA17_Chr1g0156101 37.370 289 161 5 1 271 68 354 3.69e-55 189
Msa0094290 MtrunA17_Chr4g0058231 37.037 270 157 3 1 257 63 332 1.20e-53 184
Msa0094290 MtrunA17_Chr4g0058191 36.260 262 162 2 1 257 60 321 2.60e-53 183
Msa0094290 MtrunA17_Chr3g0116741 37.542 301 157 9 3 280 88 380 5.27e-53 183
Msa0094290 MtrunA17_Chr1g0156081 36.934 287 161 5 1 269 92 376 1.45e-52 182
Msa0094290 MtrunA17_Chr4g0076181 86.869 99 11 1 269 367 68 164 6.83e-52 170
Msa0094290 MtrunA17_Chr4g0076181 44.783 230 54 8 1 225 1 162 1.01e-43 149
Msa0094290 MtrunA17_Chr4g0058201 33.974 312 185 6 1 295 63 370 1.94e-51 178
Msa0094290 MtrunA17_Chr5g0405001 33.775 302 176 7 1 280 79 378 1.04e-49 174
Msa0094290 MtrunA17_Chr6g0472311 37.591 274 152 6 1 257 76 347 1.40e-49 174
Msa0094290 MtrunA17_Chr8g0372251 33.444 302 176 8 2 280 71 370 1.79e-49 173
Msa0094290 MtrunA17_Chr4g0047661 36.090 266 161 4 1 257 83 348 2.78e-49 173
Msa0094290 MtrunA17_Chr2g0310381 36.429 280 163 5 1 268 63 339 2.51e-48 170
Msa0094290 MtrunA17_Chr4g0047631 37.165 261 159 3 1 257 84 343 3.71e-48 170
Msa0094290 MtrunA17_Chr4g0011881 38.023 263 152 4 3 257 68 327 8.26e-48 169
Msa0094290 MtrunA17_Chr1g0174461 34.701 268 163 4 1 257 71 337 1.97e-47 168
Msa0094290 MtrunA17_Chr8g0390881 34.962 266 163 4 1 257 71 335 6.29e-47 166
Msa0094290 MtrunA17_Chr2g0310391 34.643 280 168 5 1 268 63 339 1.32e-46 165
Msa0094290 MtrunA17_Chr7g0218601 35.496 262 162 3 3 257 72 333 1.99e-46 165
Msa0094290 MtrunA17_Chr5g0430031 35.094 265 162 6 1 257 72 334 2.10e-46 165
Msa0094290 MtrunA17_Chr4g0058281 33.333 300 178 7 1 280 81 378 2.29e-46 165
Msa0094290 MtrunA17_Chr4g0058261 33.557 298 174 8 1 276 97 392 2.70e-46 165
Msa0094290 MtrunA17_Chr4g0011961 37.050 278 161 5 3 269 67 341 3.64e-46 164
Msa0094290 MtrunA17_Chr5g0430081 36.162 271 151 7 1 257 70 332 4.55e-46 164
Msa0094290 MtrunA17_Chr8g0382901 35.986 289 174 6 1 281 527 812 1.20e-45 167
Msa0094290 MtrunA17_Chr8g0382901 38.194 288 143 10 1 275 63 328 4.30e-44 162
Msa0094290 MtrunA17_Chr4g0035921 31.949 313 172 10 2 280 73 378 2.93e-45 162
Msa0094290 MtrunA17_Chr1g0174441 34.074 270 164 5 1 257 91 359 7.64e-45 161
Msa0094290 MtrunA17_Chr5g0430131 35.472 265 160 6 1 257 72 333 1.31e-44 160
Msa0094290 MtrunA17_Chr4g0011981 37.410 278 161 4 3 269 67 342 2.88e-44 159
Msa0094290 MtrunA17_Chr5g0430111 32.740 281 175 6 1 269 72 350 2.97e-44 157
Msa0094290 MtrunA17_Chr4g0047691 35.361 263 161 4 1 257 87 346 3.97e-44 159
Msa0094290 MtrunA17_Chr1g0174451 33.955 268 165 4 1 257 72 338 4.19e-44 159
Msa0094290 MtrunA17_Chr5g0431511 36.330 267 158 6 1 257 69 333 7.10e-44 158
Msa0094290 MtrunA17_Chr4g0047641 33.840 263 168 3 1 257 85 347 8.01e-44 158
Msa0094290 MtrunA17_Chr5g0419691 36.882 263 156 3 3 257 67 327 2.96e-43 156
Msa0094290 MtrunA17_Chr5g0430091 33.962 265 165 5 1 257 72 334 8.48e-43 155
Msa0094290 MtrunA17_Chr5g0406651 36.882 263 156 3 3 257 68 328 1.22e-42 155
Msa0094290 MtrunA17_Chr4g0011871 36.742 264 156 3 3 257 67 328 1.44e-42 154
Msa0094290 MtrunA17_Chr8g0362481 32.714 269 167 5 1 257 1 267 1.57e-42 153
Msa0094290 MtrunA17_Chr7g0218611 36.260 262 160 3 3 257 71 332 1.81e-42 154
Msa0094290 MtrunA17_Chr6g0484841 31.970 269 165 5 1 257 72 334 3.67e-42 154
Msa0094290 MtrunA17_Chr4g0011901 35.587 281 166 5 3 270 67 345 1.42e-41 152
Msa0094290 MtrunA17_Chr6g0484811 30.943 265 174 4 1 257 72 335 2.88e-41 151
Msa0094290 MtrunA17_Chr5g0430101 32.830 265 166 6 1 257 71 331 4.16e-41 151
Msa0094290 MtrunA17_Chr4g0030711 31.365 271 169 4 3 257 74 343 4.53e-41 151
Msa0094290 MtrunA17_Chr8g0362701 31.970 269 169 5 1 257 70 336 6.21e-41 150
Msa0094290 MtrunA17_Chr1g0207841 29.617 287 183 4 3 272 75 359 1.13e-40 150
Msa0094290 MtrunA17_Chr4g0011921 34.892 278 168 4 3 269 67 342 1.05e-39 147
Msa0094290 MtrunA17_Chr4g0061381 30.682 264 167 4 1 252 66 325 1.24e-39 147
Msa0094290 MtrunA17_Chr7g0258211 31.970 269 166 6 1 258 74 336 3.25e-39 145
Msa0094290 MtrunA17_Chr1g0156061 34.432 273 120 7 1 269 91 308 4.00e-39 145
Msa0094290 MtrunA17_Chr1g0174481 33.582 268 163 5 1 257 69 332 7.59e-39 144
Msa0094290 MtrunA17_Chr5g0431501 35.094 265 160 5 3 257 71 333 9.97e-39 144
Msa0094290 MtrunA17_Chr5g0431461 35.094 265 160 5 3 257 71 333 9.97e-39 144
Msa0094290 MtrunA17_Chr3g0084921 30.996 271 172 6 1 257 70 339 2.63e-38 143
Msa0094290 MtrunA17_Chr8g0344151 29.963 267 173 4 1 256 71 334 2.65e-38 143
Msa0094290 MtrunA17_Chr1g0174471 31.955 266 167 5 5 257 89 353 2.76e-38 143
Msa0094290 MtrunA17_Chr7g0235551 30.627 271 169 6 1 257 69 334 2.51e-37 140
Msa0094290 MtrunA17_Chr5g0445411 64.516 93 33 0 1 93 82 174 3.00e-37 132
Msa0094290 MtrunA17_Chr7g0258221 32.342 269 169 5 1 257 69 336 1.12e-36 139
Msa0094290 MtrunA17_Chr8g0344191 30.189 265 175 4 1 256 104 367 6.90e-36 137
Msa0094290 MtrunA17_Chr3g0086661 31.111 270 170 6 1 257 67 333 7.75e-36 136
Msa0094290 MtrunA17_Chr1g0174421 32.759 232 147 4 1 224 83 313 8.92e-36 133
Msa0094290 MtrunA17_Chr3g0086651 30.515 272 169 6 1 257 67 333 1.48e-35 135
Msa0094290 MtrunA17_Chr4g0011861 35.498 231 138 3 3 224 67 295 2.43e-35 131
Msa0094290 MtrunA17_Chr3g0086691 28.102 274 183 5 1 262 67 338 2.98e-35 135
Msa0094290 MtrunA17_Chr8g0344181 30.189 265 175 4 1 256 73 336 4.14e-35 134
Msa0094290 MtrunA17_Chr5g0401681 33.099 284 164 9 3 270 69 342 1.02e-34 133
Msa0094290 MtrunA17_Chr4g0030701 28.309 272 179 3 1 257 70 340 1.29e-34 133
Msa0094290 MtrunA17_Chr4g0039391 32.721 272 167 7 3 262 72 339 2.18e-34 132
Msa0094290 MtrunA17_Chr5g0445341 66.265 83 27 1 1 82 1 83 3.41e-34 121
Msa0094290 MtrunA17_Chr2g0296661 30.769 286 174 8 3 269 69 349 2.87e-33 129
Msa0094290 MtrunA17_Chr3g0094231 28.731 268 172 7 1 257 71 330 5.11e-33 129
Msa0094290 MtrunA17_Chr5g0431601 65.060 83 28 1 1 83 1 82 5.62e-33 118
Msa0094290 MtrunA17_Chr7g0254641 29.779 272 174 6 1 257 72 341 7.88e-33 128
Msa0094290 MtrunA17_Chr4g0030741 29.020 255 168 6 3 250 101 349 1.03e-32 125
Msa0094290 MtrunA17_Chr3g0094171 28.409 264 181 3 1 257 75 337 1.37e-32 127
Msa0094290 MtrunA17_Chr7g0224561 28.195 266 174 5 3 257 69 328 2.31e-32 127
Msa0094290 MtrunA17_Chr7g0224551 28.195 266 174 5 3 257 69 328 2.78e-32 127
Msa0094290 MtrunA17_Chr4g0057001 29.008 262 178 4 3 257 87 347 3.13e-32 126
Msa0094290 MtrunA17_Chr4g0011931 35.217 230 139 3 3 224 67 294 3.89e-32 122
Msa0094290 MtrunA17_Chr8g0351801 29.856 278 174 7 1 258 69 345 1.94e-31 124
Msa0094290 MtrunA17_Chr4g0056951 27.757 263 181 3 3 257 81 342 2.02e-31 124
Msa0094290 MtrunA17_Chr1g0200961 29.630 270 173 8 1 257 63 328 4.77e-31 123
Msa0094290 MtrunA17_Chr6g0451751 29.537 281 176 5 3 262 80 359 6.18e-30 120
Msa0094290 MtrunA17_Chr7g0255531 27.715 267 173 4 5 257 67 327 1.17e-29 119
Msa0094290 MtrunA17_Chr4g0008101 30.035 283 174 5 3 262 78 359 1.58e-29 119
Msa0094290 MtrunA17_Chr4g0052851 29.197 274 171 8 3 267 71 330 6.19e-29 117
Msa0094290 MtrunA17_Chr6g0451691 29.286 280 172 7 3 257 80 358 6.96e-29 117
Msa0094290 MtrunA17_Chr1g0205371 26.838 272 180 6 1 261 70 333 1.26e-28 116
Msa0094290 MtrunA17_Chr2g0296651 30.545 275 168 7 3 262 68 334 1.47e-28 116
Msa0094290 MtrunA17_Chr5g0431591 35.762 151 94 2 110 258 1 150 2.50e-28 112
Msa0094290 MtrunA17_Chr5g0431591 32.143 112 71 3 256 364 7 116 4.57e-12 66.2
Msa0094290 MtrunA17_Chr5g0431631 64.000 75 27 0 1 75 87 161 4.30e-28 107
Msa0094290 MtrunA17_Chr4g0046331 28.731 268 169 10 3 257 73 331 4.80e-28 114
Msa0094290 MtrunA17_Chr4g0046321 27.612 268 172 10 3 257 73 331 4.82e-28 114
Msa0094290 MtrunA17_Chr4g0017411 31.227 269 164 8 3 263 68 323 4.91e-28 114
Msa0094290 MtrunA17_Chr1g0160851 26.866 268 177 6 1 257 69 328 1.25e-27 113
Msa0094290 MtrunA17_Chr1g0205361 26.667 270 175 8 1 257 69 328 1.31e-27 113
Msa0094290 MtrunA17_Chr8g0355961 27.675 271 173 9 1 257 76 337 1.64e-27 113
Msa0094290 MtrunA17_Chr4g0046351 28.358 268 170 10 3 257 73 331 1.89e-27 113
Msa0094290 MtrunA17_Chr2g0304871 29.412 272 171 6 3 257 78 345 2.63e-27 112
Msa0094290 MtrunA17_Chr2g0314721 27.652 264 181 5 1 257 79 339 2.68e-27 112
Msa0094290 MtrunA17_Chr4g0053621 27.953 254 160 6 21 257 86 333 4.40e-27 112
Msa0094290 MtrunA17_Chr8g0346261 29.478 268 163 10 1 257 122 374 5.53e-27 112
Msa0094290 MtrunA17_Chr1g0176831 28.413 271 170 7 1 257 98 358 8.51e-27 111
Msa0094290 MtrunA17_Chr6g0451781 29.348 276 173 5 3 257 113 387 1.15e-26 111
Msa0094290 MtrunA17_Chr8g0356001 27.306 271 174 9 1 257 76 337 1.24e-26 110
Msa0094290 MtrunA17_Chr8g0339311 27.899 276 182 7 3 262 83 357 1.87e-26 110
Msa0094290 MtrunA17_Chr6g0451741 28.470 281 172 7 3 257 99 376 2.06e-25 107
Msa0094290 MtrunA17_Chr5g0401691 29.057 265 170 6 3 257 88 344 5.08e-25 106
Msa0094290 MtrunA17_Chr4g0039901 27.306 271 173 7 1 257 70 330 1.08e-24 105
Msa0094290 MtrunA17_Chr6g0484771 34.677 124 79 1 1 122 1 124 3.41e-24 97.1
Msa0094290 MtrunA17_Chr6g0466941 27.174 276 179 8 3 257 73 347 8.97e-24 102
Msa0094290 MtrunA17_Chr1g0207851 25.105 239 160 4 3 224 75 311 1.26e-23 100
Msa0094290 MtrunA17_Chr5g0419451 27.881 269 169 10 1 257 95 350 1.78e-23 101
Msa0094290 MtrunA17_Chr1g0200951 26.148 283 183 8 1 268 100 371 3.55e-23 100
Msa0094290 MtrunA17_Chr7g0265611 25.614 285 196 5 1 270 81 364 4.69e-23 100
Msa0094290 MtrunA17_Chr2g0314731 26.236 263 182 6 1 255 68 326 4.91e-23 100
Msa0094290 MtrunA17_Chr5g0430171 33.758 157 100 3 1 154 72 227 8.17e-23 95.5
Msa0094290 MtrunA17_Chr5g0395321 26.923 260 179 6 1 257 77 328 1.32e-22 99.0
Msa0094290 MtrunA17_Chr8g0339331 24.627 268 189 2 3 257 78 345 1.39e-22 99.0
Msa0094290 MtrunA17_Chr7g0246151 26.838 272 177 8 1 257 69 333 1.84e-22 98.6
Msa0094290 MtrunA17_Chr4g0052861 26.119 268 178 5 3 257 69 329 2.17e-22 98.2
Msa0094290 MtrunA17_Chr5g0395331 25.436 287 187 8 1 268 72 350 2.41e-22 98.2
Msa0094290 MtrunA17_Chr6g0466901 24.662 296 200 8 3 278 73 365 3.98e-22 97.8
Msa0094290 MtrunA17_Chr7g0246221 26.471 272 179 7 1 257 69 334 5.59e-22 97.1
Msa0094290 MtrunA17_Chr3g0117321 51.190 84 41 0 1 84 42 125 7.48e-22 89.7
Msa0094290 MtrunA17_Chr2g0310371 48.193 83 43 0 1 83 63 145 1.01e-21 90.1
Msa0094290 MtrunA17_Chr7g0246131 26.829 287 186 7 1 268 69 350 2.13e-21 95.5
Msa0094290 MtrunA17_Chr3g0082701 27.957 279 176 7 3 257 78 355 3.37e-21 95.1
Msa0094290 MtrunA17_Chr7g0246121 25.448 279 197 6 1 271 69 344 4.02e-21 94.7
Msa0094290 MtrunA17_Chr6g0458561 25.185 270 186 4 1 257 92 358 5.00e-21 94.4
Msa0094290 MtrunA17_Chr3g0116721 27.749 191 124 5 73 252 2 189 1.09e-20 89.0
Msa0094290 MtrunA17_Chr4g0052881 25.397 252 167 5 20 257 86 330 1.29e-20 93.2
Msa0094290 MtrunA17_Chr7g0246181 24.823 282 196 7 1 268 69 348 1.99e-20 92.4
Msa0094290 MtrunA17_Chr4g0046671 25.532 235 159 4 3 223 83 315 2.95e-19 87.4
Msa0094290 MtrunA17_Chr4g0046691 27.273 187 131 2 3 185 78 263 4.87e-19 86.7
Msa0094290 MtrunA17_Chr6g0451641 25.182 274 182 7 3 257 78 347 9.48e-19 87.4
Msa0094290 MtrunA17_Chr2g0314771 27.500 160 110 2 1 154 1 160 1.10e-18 82.4
Msa0094290 MtrunA17_Chr5g0395381 23.810 273 172 6 1 268 77 318 1.28e-18 87.0
Msa0094290 MtrunA17_Chr5g0432751 24.354 271 182 6 3 257 71 334 1.95e-18 86.7
Msa0094290 MtrunA17_Chr1g0164211 24.151 265 190 5 1 258 66 326 1.97e-18 86.7
Msa0094290 MtrunA17_Chr8g0377341 27.174 276 162 11 1 257 104 359 2.46e-18 86.3
Msa0094290 MtrunA17_Chr5g0402971 26.667 240 152 6 3 223 79 313 3.60e-18 84.3
Msa0094290 MtrunA17_Chr1g0197871 24.906 265 185 6 1 257 69 327 5.66e-18 85.1
Msa0094290 MtrunA17_Chr1g0210091 23.913 276 175 8 3 257 103 364 8.37e-18 84.7
Msa0094290 MtrunA17_Chr3g0107541 24.176 273 181 8 3 256 90 355 9.62e-18 84.7
Msa0094290 MtrunA17_Chr4g0046631 25.100 251 164 6 3 236 85 328 1.79e-17 83.6
Msa0094290 MtrunA17_Chr8g0370651 23.443 273 186 6 3 256 84 352 5.87e-17 82.0
Msa0094290 MtrunA17_Chr5g0446101 29.530 149 100 2 110 257 1 145 6.33e-17 80.5
Msa0094290 MtrunA17_Chr8g0370641 23.077 273 187 6 3 256 80 348 3.37e-16 79.7
Msa0094290 MtrunA17_Chr6g0451801 26.000 250 151 7 3 224 78 321 4.26e-16 78.6
Msa0094290 MtrunA17_Chr5g0430071 31.383 188 119 6 78 257 2 187 7.54e-16 78.2
Msa0094290 MtrunA17_Chr6g0451681 39.583 96 58 0 3 98 100 195 1.60e-15 77.8
Msa0094290 MtrunA17_Chr1g0197851 23.485 264 190 5 1 257 69 327 2.29e-15 77.4
Msa0094290 MtrunA17_Chr1g0197891 22.727 264 192 5 1 257 69 327 5.30e-15 76.3
Msa0094290 MtrunA17_Chr1g0197881 23.106 264 191 5 1 257 68 326 5.40e-15 76.3
Msa0094290 MtrunA17_Chr3g0107611 23.022 278 183 8 3 256 90 360 2.94e-14 73.9
Msa0094290 MtrunA17_Chr3g0105751 27.197 239 148 8 3 222 87 318 7.57e-14 72.4
Msa0094290 MtrunA17_Chr3g0101641 38.158 76 47 0 110 185 1 76 2.39e-13 65.5
Msa0094290 MtrunA17_Chr3g0101641 38.571 70 43 0 256 325 7 76 2.52e-12 62.4
Msa0094290 MtrunA17_Chr1g0213671 23.551 276 196 6 1 263 70 343 2.67e-13 70.9
Msa0094290 MtrunA17_Chr1g0176851 25.229 218 141 8 53 257 2 210 4.04e-13 68.2
Msa0094290 MtrunA17_Chr3g0107561 31.818 88 60 0 3 90 85 172 4.67e-12 66.6
Msa0094290 MtrunA17_Chr5g0445541 70.270 37 11 0 1 37 75 111 7.13e-12 62.4
Msa0094290 MtrunA17_Chr5g0445641 39.744 78 47 0 67 144 22 99 4.05e-11 59.7
Msa0094290 MtrunA17_Chr2g0280081 22.846 267 188 7 1 255 569 829 4.80e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0094290 AT3G48280.1 36.226 265 166 1 1 265 65 326 3.10e-53 183
Msa0094290 AT3G26310.1 37.226 274 156 6 1 263 65 333 8.34e-53 182
Msa0094290 AT3G48270.1 33.208 265 173 1 1 265 66 326 8.09e-50 174
Msa0094290 AT3G48310.1 35.206 267 165 3 1 265 67 327 1.78e-49 173
Msa0094290 AT4G13310.2 34.375 288 175 7 1 280 67 348 1.99e-49 171
Msa0094290 AT3G48320.1 34.340 265 170 1 1 265 67 327 3.18e-49 172
Msa0094290 AT3G26320.1 37.828 267 154 6 1 258 66 329 4.06e-49 172
Msa0094290 AT3G26300.1 35.587 281 165 6 1 270 66 341 1.35e-48 171
Msa0094290 AT4G13310.1 34.375 288 175 7 1 280 67 348 1.47e-48 171
Msa0094290 AT5G06900.1 33.663 303 178 7 1 283 69 368 7.44e-48 169
Msa0094290 AT4G36220.1 32.573 307 177 8 2 280 76 380 1.50e-47 169
Msa0094290 AT5G25120.1 35.000 280 168 6 1 271 64 338 8.16e-46 164
Msa0094290 AT4G13290.1 33.456 272 163 5 1 265 68 328 1.09e-45 163
Msa0094290 AT3G48300.1 32.075 265 176 1 1 265 64 324 3.90e-45 162
Msa0094290 AT3G48300.2 32.075 265 176 1 1 265 66 326 4.04e-45 162
Msa0094290 AT3G26330.1 35.581 267 160 6 1 258 66 329 7.66e-45 161
Msa0094290 AT5G25180.1 33.453 278 173 5 1 270 64 337 1.95e-44 160
Msa0094290 AT5G25140.1 35.714 266 159 5 1 258 64 325 2.37e-44 160
Msa0094290 AT5G57260.1 35.294 272 155 7 1 258 65 329 3.70e-44 159
Msa0094290 AT5G24950.1 31.203 266 167 4 1 257 67 325 4.12e-44 159
Msa0094290 AT3G26290.2 35.145 276 149 9 1 258 79 342 4.67e-44 159
Msa0094290 AT3G26290.1 35.145 276 149 9 1 258 66 329 5.80e-44 159
Msa0094290 AT5G25130.1 33.574 277 176 4 1 271 64 338 1.08e-43 158
Msa0094290 AT3G26210.1 34.962 266 163 5 1 257 66 330 1.10e-43 158
Msa0094290 AT4G31500.1 34.100 261 165 4 3 257 67 326 1.23e-43 158
Msa0094290 AT5G04330.1 32.686 309 181 8 1 284 67 373 1.76e-43 157
Msa0094290 AT1G13080.1 36.029 272 159 6 3 262 68 336 1.83e-43 157
Msa0094290 AT1G13110.1 34.074 270 162 7 1 257 67 333 5.93e-42 153
Msa0094290 AT3G26280.1 35.036 274 153 9 1 257 67 332 7.73e-42 153
Msa0094290 AT3G26280.2 35.036 274 153 9 1 257 84 349 8.73e-42 153
Msa0094290 AT3G48290.1 32.794 247 162 1 1 247 68 310 8.86e-42 152
Msa0094290 AT2G30750.1 33.080 263 165 4 1 257 68 325 7.82e-41 150
Msa0094290 AT2G24180.1 36.704 267 154 7 3 258 73 335 9.26e-41 150
Msa0094290 AT2G30770.1 31.559 263 169 4 1 257 68 325 4.94e-40 148
Msa0094290 AT1G11610.1 31.939 263 168 4 1 257 68 325 1.08e-39 147
Msa0094290 AT1G11610.2 31.939 263 168 4 1 257 68 325 1.27e-39 147
Msa0094290 AT1G13090.2 32.721 272 167 6 3 262 65 332 1.84e-39 146
Msa0094290 AT5G24960.2 30.483 269 179 4 1 264 68 333 2.16e-39 144
Msa0094290 AT5G07990.1 30.483 269 168 6 1 257 68 329 2.37e-39 146
Msa0094290 AT5G24960.1 30.483 269 179 4 1 264 68 333 1.57e-38 144
Msa0094290 AT3G44250.1 33.459 266 163 5 3 257 65 327 2.49e-38 143
Msa0094290 AT2G02580.1 35.955 267 159 6 1 258 66 329 4.50e-38 143
Msa0094290 AT3G26200.1 34.672 274 154 8 1 257 63 328 1.08e-37 142
Msa0094290 AT5G42590.1 30.000 270 182 3 1 265 67 334 3.26e-37 140
Msa0094290 AT3G26190.1 32.601 273 161 7 1 257 63 328 1.10e-36 139
Msa0094290 AT3G48290.2 29.670 273 162 2 1 247 68 336 1.87e-36 139
Msa0094290 AT3G53280.1 31.183 279 167 8 1 261 63 334 1.96e-36 138
Msa0094290 AT4G13770.1 30.827 266 173 4 1 258 66 328 4.16e-36 137
Msa0094290 AT1G13100.1 33.210 271 160 8 3 257 62 327 4.57e-36 137
Msa0094290 AT3G26270.1 32.222 270 166 7 1 257 67 332 4.98e-36 137
Msa0094290 AT4G20240.2 27.508 309 179 7 1 280 68 360 4.98e-36 135
Msa0094290 AT3G26170.1 32.234 273 165 6 1 258 65 332 9.01e-36 136
Msa0094290 AT4G37320.1 31.022 274 169 7 1 263 69 333 1.35e-35 136
Msa0094290 AT4G20240.1 27.508 309 179 7 1 280 68 360 1.78e-35 135
Msa0094290 AT5G67310.1 30.769 273 173 7 3 265 80 346 7.57e-35 134
Msa0094290 AT3G26180.1 33.091 275 160 9 1 258 65 332 1.01e-34 134
Msa0094290 AT4G12300.1 32.197 264 169 4 3 257 79 341 1.99e-34 133
Msa0094290 AT3G26160.1 31.387 274 166 8 1 258 65 332 5.37e-34 131
Msa0094290 AT3G26220.1 31.900 279 163 8 3 262 66 336 7.91e-34 131
Msa0094290 AT2G23220.1 30.797 276 171 5 3 267 86 352 1.23e-33 130
Msa0094290 AT4G12320.1 31.203 266 171 5 3 257 79 343 3.74e-33 129
Msa0094290 AT3G26150.1 31.985 272 167 7 1 258 65 332 4.84e-33 129
Msa0094290 AT2G42250.1 30.769 273 178 4 1 263 76 347 6.21e-33 129
Msa0094290 AT1G01280.1 27.597 308 189 8 1 280 67 368 1.07e-32 128
Msa0094290 AT3G26230.1 32.014 278 164 7 3 262 63 333 1.16e-32 128
Msa0094290 AT3G28740.1 31.461 267 163 6 3 258 79 336 2.66e-32 127
Msa0094290 AT4G12310.1 30.451 266 173 5 3 257 81 345 3.58e-31 124
Msa0094290 AT2G40890.1 27.907 301 186 7 5 280 66 360 6.73e-31 123
Msa0094290 AT5G44620.1 28.195 266 177 4 3 257 83 345 1.05e-30 122
Msa0094290 AT4G22710.1 28.947 266 173 5 1 255 89 349 3.70e-30 121
Msa0094290 AT4G22690.1 28.947 266 173 5 1 255 120 380 5.60e-30 121
Msa0094290 AT3G26830.1 29.478 268 171 6 3 257 65 327 1.30e-29 119
Msa0094290 AT4G37330.1 29.963 267 166 6 1 257 69 324 2.06e-29 119
Msa0094290 AT4G37310.1 28.102 274 180 7 3 263 69 338 7.62e-29 117
Msa0094290 AT4G37400.1 28.679 265 169 7 3 257 68 322 1.38e-28 116
Msa0094290 AT3G61040.2 27.402 281 184 8 1 268 68 341 2.30e-28 114
Msa0094290 AT4G37340.1 28.731 268 168 6 3 257 70 327 6.66e-28 114
Msa0094290 AT5G35715.1 28.464 267 176 6 1 255 1 264 1.01e-27 113
Msa0094290 AT3G61040.1 27.402 281 184 8 1 268 68 341 1.20e-27 114
Msa0094290 AT3G53300.1 30.370 270 171 7 1 257 63 328 1.28e-27 114
Msa0094290 AT5G06905.1 26.042 288 194 5 1 277 66 345 3.18e-27 112
Msa0094290 AT5G09970.1 26.599 297 187 8 1 288 107 381 3.61e-27 112
Msa0094290 AT4G37430.1 28.058 278 174 8 3 263 65 333 4.94e-27 112
Msa0094290 AT4G37370.1 28.571 266 170 6 3 257 70 326 7.12e-27 111
Msa0094290 AT1G13090.1 29.487 234 149 6 3 224 65 294 8.92e-27 108
Msa0094290 AT5G42580.1 26.154 260 180 3 1 258 75 324 1.37e-26 110
Msa0094290 AT2G45570.1 25.461 271 186 7 1 258 73 340 1.54e-26 110
Msa0094290 AT2G23190.1 28.159 277 177 7 3 267 115 381 2.44e-26 110
Msa0094290 AT2G45560.1 26.277 274 179 7 1 258 73 339 2.59e-26 110
Msa0094290 AT5G36220.1 30.855 269 165 8 1 257 74 333 3.83e-26 109
Msa0094290 AT2G14100.1 29.286 280 164 8 3 261 81 347 5.06e-26 109
Msa0094290 AT1G50520.1 28.571 280 174 8 1 262 79 350 8.49e-26 108
Msa0094290 AT4G31940.1 29.286 280 174 6 1 257 70 348 9.63e-26 108
Msa0094290 AT1G50560.1 26.316 285 177 6 1 263 79 352 1.30e-25 108
Msa0094290 AT5G57220.1 28.571 273 172 9 3 263 67 328 2.51e-25 107
Msa0094290 AT1G74110.1 25.974 308 188 9 1 289 102 388 4.61e-25 106
Msa0094290 AT4G37410.1 27.985 268 173 7 1 257 66 324 5.11e-25 106
Msa0094290 AT1G74550.1 26.871 294 185 8 5 280 66 347 7.66e-25 105
Msa0094290 AT4G12330.1 25.940 266 182 5 3 257 83 344 1.45e-24 105
Msa0094290 AT3G32047.1 26.515 264 179 4 3 257 80 337 1.56e-24 105
Msa0094290 AT3G20090.2 26.165 279 179 6 1 261 79 348 1.80e-24 105
Msa0094290 AT5G10610.1 28.000 300 189 9 1 280 68 360 3.70e-24 103
Msa0094290 AT3G20110.1 27.969 261 180 2 1 255 75 333 5.13e-24 103
Msa0094290 AT2G45550.1 25.556 270 186 8 1 258 73 339 6.05e-24 103
Msa0094290 AT5G10600.1 28.053 303 187 12 1 280 82 376 6.69e-24 103
Msa0094290 AT2G25160.2 29.682 283 168 10 4 263 74 348 1.06e-23 102
Msa0094290 AT4G15350.1 27.481 262 175 7 1 252 71 327 1.08e-23 102
Msa0094290 AT2G05180.1 26.502 283 192 7 1 270 77 356 1.69e-23 101
Msa0094290 AT3G20940.1 25.912 274 188 6 1 262 78 348 2.25e-23 101
Msa0094290 AT2G25160.1 28.622 283 171 8 4 263 74 348 2.60e-23 101
Msa0094290 AT4G20235.1 33.721 172 95 4 13 184 82 234 8.99e-23 98.2
Msa0094290 AT3G20130.1 25.461 271 190 4 1 261 78 346 1.30e-22 99.4
Msa0094290 AT3G25180.2 27.985 268 175 8 3 257 78 340 1.85e-22 98.2
Msa0094290 AT4G37360.1 27.239 268 172 6 3 257 70 327 2.42e-22 98.6
Msa0094290 AT5G47990.1 26.336 262 178 6 1 252 78 334 2.50e-22 98.6
Msa0094290 AT2G27000.1 27.445 317 204 10 1 302 75 380 3.82e-22 98.2
Msa0094290 AT4G31970.1 27.240 279 180 6 1 257 70 347 5.80e-22 97.4
Msa0094290 AT3G25180.1 27.985 268 175 8 3 257 78 340 6.80e-22 97.4
Msa0094290 AT3G20120.4 27.863 262 179 5 1 255 77 335 7.17e-22 97.4
Msa0094290 AT3G20950.1 26.374 273 187 6 1 262 82 351 8.06e-22 97.1
Msa0094290 AT2G46660.1 26.136 264 174 8 1 257 108 357 9.04e-22 97.1
Msa0094290 AT3G20140.1 24.528 265 188 4 1 257 78 338 9.90e-22 96.7
Msa0094290 AT3G53305.1 39.516 124 73 1 1 122 1 124 1.85e-21 94.4
Msa0094290 AT3G20960.2 23.162 272 198 4 1 262 77 347 5.53e-21 94.7
Msa0094290 AT3G61880.2 28.625 269 157 12 1 253 104 353 5.73e-21 94.7
Msa0094290 AT1G33720.1 26.119 268 185 6 1 257 73 338 6.16e-21 94.4
Msa0094290 AT3G61880.1 28.625 269 157 12 1 253 104 353 6.30e-21 94.7
Msa0094290 AT3G53290.1 31.839 223 127 8 19 224 11 225 9.55e-21 93.2
Msa0094290 AT1G66540.1 30.000 220 131 7 52 257 4 214 9.59e-21 92.8
Msa0094290 AT4G15360.1 25.000 256 186 2 8 257 83 338 9.75e-21 94.0
Msa0094290 AT3G20100.1 25.461 271 191 4 1 261 77 346 1.08e-20 94.0
Msa0094290 AT1G13080.2 30.151 199 124 5 76 262 23 218 1.22e-20 92.8
Msa0094290 AT4G15380.1 24.427 262 190 4 1 258 78 335 3.32e-20 92.4
Msa0094290 AT1G28430.1 25.461 271 174 7 1 255 76 334 8.74e-20 91.3
Msa0094290 AT2G45580.3 27.106 273 180 7 1 258 73 341 2.43e-19 89.0
Msa0094290 AT2G45580.1 27.106 273 180 7 1 258 73 341 5.38e-19 88.6
Msa0094290 AT4G15330.1 22.222 261 195 2 1 255 74 332 7.74e-19 88.2
Msa0094290 AT3G52970.1 24.739 287 196 8 1 271 72 354 9.56e-19 87.8
Msa0094290 AT1G13710.1 24.815 270 176 10 1 255 86 343 2.64e-18 86.7
Msa0094290 AT3G20130.2 25.000 248 174 4 24 261 73 318 6.36e-18 85.5
Msa0094290 AT3G52970.2 24.080 299 197 7 1 271 72 368 1.96e-17 84.0
Msa0094290 AT2G30490.1 24.549 277 183 7 3 262 71 338 2.68e-17 83.6
Msa0094290 AT3G20080.2 22.846 267 193 6 1 258 78 340 9.16e-17 82.0
Msa0094290 AT3G20080.1 22.846 267 193 6 1 258 78 340 9.16e-17 82.0
Msa0094290 AT4G39950.2 25.092 271 182 6 3 256 136 402 1.11e-15 79.0
Msa0094290 AT4G39950.1 25.092 271 182 6 3 256 96 362 1.17e-15 78.6
Msa0094290 AT2G22330.1 23.048 269 190 5 3 256 98 364 2.52e-15 77.8
Msa0094290 AT2G22330.2 23.048 269 190 5 3 256 121 387 2.61e-15 77.8
Msa0094290 AT3G10560.1 23.507 268 182 6 1 255 84 341 5.25e-15 76.6
Msa0094290 AT5G04630.1 24.528 265 182 10 3 255 78 336 7.83e-15 76.3
Msa0094290 AT3G20960.1 22.944 231 167 4 42 262 15 244 2.10e-14 74.3
Msa0094290 AT1G01190.2 24.151 265 169 10 1 253 116 360 3.58e-14 74.3
Msa0094290 AT1G01190.1 24.151 265 169 10 1 253 111 355 3.58e-14 74.3
Msa0094290 AT1G33720.4 25.604 207 142 5 61 257 2 206 4.09e-14 73.6
Msa0094290 AT1G33720.3 25.604 207 142 5 61 257 2 206 4.09e-14 73.6
Msa0094290 AT1G33720.5 25.604 207 142 5 61 257 2 206 4.09e-14 73.6
Msa0094290 AT4G15330.2 21.008 238 180 2 24 255 69 304 9.13e-14 72.8
Msa0094290 AT5G61320.1 23.922 255 181 7 3 247 71 322 9.69e-14 72.8
Msa0094290 AT2G12190.1 23.381 278 188 8 1 255 62 337 2.97e-13 71.2
Msa0094290 AT1G16410.2 21.898 274 191 6 3 256 85 355 4.00e-13 70.5
Msa0094290 AT1G16410.1 21.898 274 191 6 3 256 85 355 7.75e-13 70.1
Msa0094290 AT2G45560.2 22.318 233 160 6 1 217 73 300 1.39e-12 68.2
Msa0094290 AT4G31950.1 23.571 280 178 8 1 257 70 336 1.65e-12 68.9
Msa0094290 AT1G33730.1 24.257 202 139 6 67 257 4 202 3.10e-12 67.8
Msa0094290 AT1G33730.2 24.257 202 139 6 67 257 4 202 3.10e-12 67.8
Msa0094290 AT1G58260.1 19.708 274 194 7 4 256 78 346 1.36e-11 66.2
Msa0094290 AT1G64950.1 22.581 279 189 8 1 255 62 337 1.65e-11 65.9
Msa0094290 AT1G16400.1 22.180 266 186 7 10 256 91 354 2.35e-11 65.5
Msa0094290 AT2G45560.3 23.353 167 111 4 1 154 73 235 2.36e-11 63.5
Msa0094290 AT3G20120.2 25.743 202 140 5 61 255 1 199 5.41e-11 63.9
Msa0094290 AT3G20120.3 25.743 202 140 5 61 255 1 199 5.41e-11 63.9
Msa0094290 AT3G20120.1 25.743 202 140 5 61 255 1 199 5.41e-11 63.9
Msa0094290 AT5G04660.1 22.433 263 190 8 3 255 81 339 8.86e-11 63.5

Find 105 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAACTTCTTAGTGCTAAA+AGG 0.156998 1_2:+77495821 Msa0094290:CDS
ATGGCCCTGGTGGAAGTTTA+TGG 0.181679 1_2:-77495501 None:intergenic
CAGCAACCCAAATCCGAAAA+TGG 0.203925 1_2:+77493747 Msa0094290:five_prime_UTR
TACTAGGTTGAAAGCTAAAT+TGG 0.205393 1_2:+77496098 Msa0094290:CDS
TTGCTCCATATGGTGATTAT+TGG 0.212477 1_2:+77495773 Msa0094290:CDS
GAAAGTCAAGGAGAGAAATT+TGG 0.213808 1_2:+77495477 Msa0094290:five_prime_UTR
TCTTGTTCTCCACTTCTCTT+TGG 0.257459 1_2:+77493703 Msa0094290:five_prime_UTR
TAGCTTTAGTCCTAGTAATA+AGG 0.261616 1_2:-77502079 None:intergenic
ATTATTTCTTTGGCTATATC+AGG 0.266239 1_2:-77495667 None:intergenic
ACAATGTCAAAGCCGTGATA+TGG 0.301798 1_2:+77502261 Msa0094290:CDS
TTGACATTGTCTTGTGTGAT+TGG 0.321627 1_2:-77502248 None:intergenic
ATAATAATGGTGATTCAATT+AGG 0.321794 1_2:+77494028 Msa0094290:five_prime_UTR
TTCTACCTCATCTTCTCTAA+TGG 0.324917 1_2:-77495860 None:intergenic
ACCTCTTATGCATCTTCAAC+TGG 0.328958 1_2:+77495615 Msa0094290:exon
TTGACATTGTTATCTGTGAT+TGG 0.329086 1_2:-77496261 None:intergenic
TACTAAAATAGCTTTCTCTT+TGG 0.330023 1_2:+77495930 Msa0094290:CDS
TGTGCCTTCTTCCTCACTCT+TGG 0.337068 1_2:-77499949 None:intergenic
TGATGCAAGTTTCCTATTAG+AGG 0.344056 1_2:-77495532 None:intergenic
TGCAATATCTGTTGATTCAT+AGG 0.355741 1_2:-77495749 None:intergenic
GATATTGCATTTGCTCCATA+TGG 0.357338 1_2:+77495763 Msa0094290:CDS
CCATGGAAGCTTCCTCTAAT+AGG 0.361382 1_2:+77495520 Msa0094290:five_prime_UTR
AACCTAGTAATTAGATGAAT+AGG 0.370566 1_2:-77496084 None:intergenic
ACAATGTCAAAGCCGTCATA+TGG 0.379414 1_2:+77496274 Msa0094290:CDS
GAGATAGATTTCCAAGTGTA+TGG 0.380798 1_2:-77495582 None:intergenic
AAACTATTCACCTTATTACT+AGG 0.384037 1_2:+77502069 Msa0094290:CDS
GAGTCTTCTAAAAGTGTTGA+TGG 0.393309 1_2:+77494141 Msa0094290:five_prime_UTR
GTTTATCATGAGAAGAGAAA+TGG 0.400563 1_2:-77493664 None:intergenic
TCAAACCATGCCGGCATTCA+AGG 0.400717 1_2:+77496183 Msa0094290:CDS
AAAGAAGGGGTTGATAATAA+TGG 0.403623 1_2:+77494015 Msa0094290:five_prime_UTR
TGACATTGTTATCTGTGATT+GGG 0.406245 1_2:-77496260 None:intergenic
GTGAAGAACATAGAAGAATC+TGG 0.406640 1_2:-77493637 None:intergenic
TGACATTGTCTTGTGTGATT+GGG 0.414184 1_2:-77502247 None:intergenic
AATTCAAAACATTGAAAAGA+TGG 0.417894 1_2:-77493794 None:intergenic
GGAGAATATGCAAAAGAAGT+TGG 0.425179 1_2:+77496119 Msa0094290:CDS
GCTCAAGGAATCAGTGGAAA+TGG 0.433727 1_2:+77502007 Msa0094290:CDS
AGAACTTCTTAGTGCTAAAA+GGG 0.440041 1_2:+77495822 Msa0094290:CDS
AAAGTCAAGGAGAGAAATTT+GGG 0.441802 1_2:+77495478 Msa0094290:five_prime_UTR
CTAATAAACAAGGGAAAAGA+AGG 0.444587 1_2:+77494000 Msa0094290:five_prime_UTR
ATTCAAAACATTGAAAAGAT+GGG 0.446797 1_2:-77493793 None:intergenic
AGATGAATAGGTTTAAATGA+AGG 0.449231 1_2:-77496072 None:intergenic
AACCTATTCATCTAATTACT+AGG 0.449566 1_2:+77496082 Msa0094290:CDS
AAGCTTATACAATCTATTCA+AGG 0.450095 1_2:+77495883 Msa0094290:CDS
TTTATCATGAGAAGAGAAAT+GGG 0.452880 1_2:-77493663 None:intergenic
GACCAGGATGTGTTTGGTGC+TGG 0.459348 1_2:+77499871 Msa0094290:intron
TCAATCCATGCCGGCATACA+AGG 0.459493 1_2:+77502170 Msa0094290:CDS
AATTGAAATGAGAAAAGAAA+TGG 0.460612 1_2:+77493900 Msa0094290:five_prime_UTR
CCCAGTTGAAGATGCATAAG+AGG 0.467270 1_2:-77495616 None:intergenic
GTGTTTAGCTTTAGAGAGGA+TGG 0.473641 1_2:+77494078 Msa0094290:five_prime_UTR
TTAGTTACAAGGGCAGCGTT+TGG 0.474877 1_2:+77495961 Msa0094290:CDS
GTCTTTACAACTATATATGT+AGG 0.480422 1_2:+77493850 Msa0094290:five_prime_UTR
CCTATTAGAGGAAGCTTCCA+TGG 0.481130 1_2:-77495520 None:intergenic
CAATGTCAAAGCCGTGATAT+GGG 0.482517 1_2:+77502262 Msa0094290:CDS
GATGAATAGGTTTAAATGAA+GGG 0.485300 1_2:-77496071 None:intergenic
TTTGTTTCAAGAGCAGCGTT+TGG 0.486303 1_2:+77501948 Msa0094290:intron
TGGTAAGCACCTTAGTTACA+AGG 0.495911 1_2:+77495950 Msa0094290:CDS
AGCAACCCAAATCCGAAAAT+GGG 0.499785 1_2:+77493748 Msa0094290:five_prime_UTR
TGTCTCCAATAATCACCATA+TGG 0.501068 1_2:-77495778 None:intergenic
AAACGCTGCCCTTGTAACTA+AGG 0.503281 1_2:-77495959 None:intergenic
AACTTGCATCAACTAGCATT+AGG 0.509938 1_2:+77495544 Msa0094290:five_prime_UTR
GATGTAGCCACGGACAGTAT+TGG 0.510382 1_2:+77494108 Msa0094290:five_prime_UTR
TGGAATGACCAGGATGTGTT+TGG 0.510986 1_2:+77499865 Msa0094290:intron
ACCAGGATGTGTTTGGTGCT+GGG 0.511606 1_2:+77499872 Msa0094290:intron
AGAGGAAGCTTCCATGGCCC+TGG 0.512385 1_2:-77495514 None:intergenic
ATAAACTTCCACCAGGGCCA+TGG 0.516122 1_2:+77495503 Msa0094290:five_prime_UTR
CGAACTTCTGTGTTTGCTCA+AGG 0.523922 1_2:+77501992 Msa0094290:CDS
CAATGTCAAAGCCGTCATAT+GGG 0.529916 1_2:+77496275 Msa0094290:CDS
TTCAAAACATTGAAAAGATG+GGG 0.532990 1_2:-77493792 None:intergenic
TATTGTGTTTAGCTTTAGAG+AGG 0.547675 1_2:+77494074 Msa0094290:five_prime_UTR
TTTCACCTTGTATGCCGGCA+TGG 0.551920 1_2:-77502175 None:intergenic
ACAATCAAACCAAAGAGAAG+TGG 0.554692 1_2:-77493712 None:intergenic
AACATAGAAGAATCTGGATG+AGG 0.556306 1_2:-77493631 None:intergenic
TTATTAGCTAACCCATATCA+CGG 0.568603 1_2:-77502273 None:intergenic
TTCTTCCATTAGAGAAGATG+AGG 0.568950 1_2:+77495855 Msa0094290:CDS
GCAGAGTATGCAAAAGAAGT+CGG 0.571850 1_2:+77502106 Msa0094290:CDS
TTTCACCTTGAATGCCGGCA+TGG 0.576533 1_2:-77496188 None:intergenic
AAATCCAAGAGTGAGGAAGA+AGG 0.578999 1_2:+77499945 Msa0094290:CDS
TTGGGCCATAAACTTCCACC+AGG 0.579315 1_2:+77495496 Msa0094290:five_prime_UTR
CCTCTTATGCATCTTCAACT+GGG 0.581249 1_2:+77495616 Msa0094290:exon
GTGTTTGCTCAAGGAATCAG+TGG 0.587074 1_2:+77502001 Msa0094290:CDS
TCACTTCCACACCATACACT+TGG 0.588929 1_2:+77495571 Msa0094290:five_prime_UTR
GGAAGCTTCCATGGCCCTGG+TGG 0.591888 1_2:-77495511 None:intergenic
TAATAAACAAGGGAAAAGAA+GGG 0.597223 1_2:+77494001 Msa0094290:five_prime_UTR
CAATCAAATTCAAACCATGC+CGG 0.598143 1_2:+77496174 Msa0094290:CDS
CTTCAGCAACAGCAATAGAG+TGG 0.604062 1_2:+77499902 Msa0094290:CDS
ATGATAACTAACCCATATGA+CGG 0.607587 1_2:-77496286 None:intergenic
AAAGGTAGATCTAATAAACA+AGG 0.610032 1_2:+77493990 Msa0094290:five_prime_UTR
GTGATTATTGGAGACAGATG+AGG 0.610195 1_2:+77495785 Msa0094290:CDS
ACTGGGTGAAATTTCTGCAG+TGG 0.612358 1_2:+77495633 Msa0094290:CDS
CAAACAAATTCAATCCATGC+CGG 0.612524 1_2:+77502161 Msa0094290:CDS
TTGCATCAACTAGCATTAGG+AGG 0.615760 1_2:+77495547 Msa0094290:five_prime_UTR
AATCTGGATGAGGAAGAAGA+TGG 0.620659 1_2:-77493621 None:intergenic
TGGATCATTTGATGTAGCCA+CGG 0.631475 1_2:+77494098 Msa0094290:five_prime_UTR
TTCAGCAACAGCAATAGAGT+GGG 0.633641 1_2:+77499903 Msa0094290:CDS
AATAAACAAGGGAAAAGAAG+GGG 0.634683 1_2:+77494002 Msa0094290:five_prime_UTR
GGTAAGCACCTTAGTTACAA+GGG 0.635339 1_2:+77495951 Msa0094290:CDS
AGATTTCCAAGTGTATGGTG+TGG 0.641771 1_2:-77495577 None:intergenic
CTCAAAGCTAGTGAGTCGAA+AGG 0.642988 1_2:+77494176 Msa0094290:five_prime_UTR
TCAACAAAGTGGCTGTCTCG+AGG 0.645976 1_2:+77502223 Msa0094290:CDS
AATTTATAAACAGAAAGTCA+AGG 0.656726 1_2:+77495465 Msa0094290:five_prime_UTR
TTTGGCACCAATACTGTCCG+TGG 0.657856 1_2:-77494115 None:intergenic
AAGGTAGATCTAATAAACAA+GGG 0.660472 1_2:+77493991 Msa0094290:five_prime_UTR
GAATCAGTGGAAATGGCAAG+TGG 0.661181 1_2:+77502014 Msa0094290:CDS
GAAGCAGTGGAAATGTGTGG+TGG 0.711407 1_2:+77496027 Msa0094290:CDS
TGGGCCATAAACTTCCACCA+GGG 0.734679 1_2:+77495497 Msa0094290:five_prime_UTR
AAGGAAGCAGTGGAAATGTG+TGG 0.736423 1_2:+77496024 Msa0094290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTCAAATTAAATAAATTT+TGG - chr1_2:77494602-77494621 None:intergenic 10.0%
!!! ATCAAATCAATTTTTTTAAT+TGG - chr1_2:77494678-77494697 None:intergenic 10.0%
!!! ATAATTTCTATATTTTTTTG+TGG - chr1_2:77499206-77499225 None:intergenic 10.0%
!!! TTTTAAATAAATAATATGCT+AGG + chr1_2:77500638-77500657 Msa0094290:intron 10.0%
!! TTTAAATAAATAATATGCTA+GGG + chr1_2:77500639-77500658 Msa0094290:intron 10.0%
!!! TGGAAACAATTAAAATATTT+TGG - chr1_2:77494658-77494677 None:intergenic 15.0%
!! ATATTTAGAAATTTGTAAAC+AGG - chr1_2:77496361-77496380 None:intergenic 15.0%
!!! AAACTCATTATTTTATGTTT+TGG + chr1_2:77496588-77496607 Msa0094290:intron 15.0%
!!! ATTTGTTGACTTTTATTATA+AGG + chr1_2:77497129-77497148 Msa0094290:intron 15.0%
!! TAGTTAGTATAGTTTATTTA+AGG + chr1_2:77497298-77497317 Msa0094290:intron 15.0%
!! AGTTAGTATAGTTTATTTAA+GGG + chr1_2:77497299-77497318 Msa0094290:intron 15.0%
!!! ACTTTAAAAAAAAAAAAGGA+GGG - chr1_2:77497357-77497376 None:intergenic 15.0%
!!! AACTTTAAAAAAAAAAAAGG+AGG - chr1_2:77497358-77497377 None:intergenic 15.0%
!! AACCAAAAAAAAAAACAATA+GGG - chr1_2:77497491-77497510 None:intergenic 15.0%
!! GAACCAAAAAAAAAAAAATA+GGG - chr1_2:77497614-77497633 None:intergenic 15.0%
!! TGAACCAAAAAAAAAAAAAT+AGG - chr1_2:77497615-77497634 None:intergenic 15.0%
!!! ACAATCTCTAAATTTTTAAT+GGG - chr1_2:77498374-77498393 None:intergenic 15.0%
!!! AACAATCTCTAAATTTTTAA+TGG - chr1_2:77498375-77498394 None:intergenic 15.0%
!!! ATTAACAATGCAATTTTTTT+CGG - chr1_2:77498995-77499014 None:intergenic 15.0%
!!! ATTTTAATCATTTACTTAAG+AGG - chr1_2:77499050-77499069 None:intergenic 15.0%
!! TATCAATAACTAATCTTTAT+GGG - chr1_2:77499147-77499166 None:intergenic 15.0%
!! TTATCAATAACTAATCTTTA+TGG - chr1_2:77499148-77499167 None:intergenic 15.0%
!! AGAAGAAATTTAAAAGTAAA+AGG + chr1_2:77499319-77499338 Msa0094290:intron 15.0%
!! GAAGAAATTTAAAAGTAAAA+GGG + chr1_2:77499320-77499339 Msa0094290:intron 15.0%
!!! TTAAAATTAGTCATCTTTTT+AGG + chr1_2:77499546-77499565 Msa0094290:intron 15.0%
!! GAAAAAAACTAAAAACTTAA+AGG + chr1_2:77499732-77499751 Msa0094290:intron 15.0%
!! TTAAATAAATAATATGCTAG+GGG + chr1_2:77500640-77500659 Msa0094290:intron 15.0%
!! ATTCAAAACATTGAAAAGAT+GGG - chr1_2:77493796-77493815 None:intergenic 20.0%
!! AATTCAAAACATTGAAAAGA+TGG - chr1_2:77493797-77493816 None:intergenic 20.0%
!! TGTAAAGACAAAAAAAAGAT+GGG - chr1_2:77493839-77493858 None:intergenic 20.0%
!! TTGTAAAGACAAAAAAAAGA+TGG - chr1_2:77493840-77493859 None:intergenic 20.0%
!! AATTGAAATGAGAAAAGAAA+TGG + chr1_2:77493900-77493919 Msa0094290:five_prime_UTR 20.0%
!! ATAATAATGGTGATTCAATT+AGG + chr1_2:77494028-77494047 Msa0094290:five_prime_UTR 20.0%
!! AAATTGAGAATTGTGTTAAA+TGG - chr1_2:77494222-77494241 None:intergenic 20.0%
!!! TGTTCAATTTTTTAATGATG+TGG - chr1_2:77494753-77494772 None:intergenic 20.0%
!! TAAACCAATTAAAACGTTAT+GGG - chr1_2:77495038-77495057 None:intergenic 20.0%
!! TTAAACCAATTAAAACGTTA+TGG - chr1_2:77495039-77495058 None:intergenic 20.0%
!! AAAATACATTGTTTAATGGA+TGG - chr1_2:77495252-77495271 None:intergenic 20.0%
!! AGACAAAATACATTGTTTAA+TGG - chr1_2:77495256-77495275 None:intergenic 20.0%
!! AATTTATAAACAGAAAGTCA+AGG + chr1_2:77495465-77495484 Msa0094290:five_prime_UTR 20.0%
!!! ATGTGTTTTCATTATTTCTT+TGG - chr1_2:77495680-77495699 None:intergenic 20.0%
!! AAATTATGACCAAGTATTAT+TGG - chr1_2:77496431-77496450 None:intergenic 20.0%
!! ATATTTAGAAATCTGTAAAC+AGG - chr1_2:77496458-77496477 None:intergenic 20.0%
!! TTCTAGACAAAATTCAAATT+TGG - chr1_2:77496625-77496644 None:intergenic 20.0%
!! TATGCTATAAAATATTCGTA+TGG + chr1_2:77496664-77496683 Msa0094290:intron 20.0%
!! CAAAACAATGTAAACAAAAT+AGG - chr1_2:77496776-77496795 None:intergenic 20.0%
!! AAAGCGAATAAAATAACAAT+TGG + chr1_2:77496904-77496923 Msa0094290:intron 20.0%
!! TATTTCCATGTATCAAAAAA+TGG + chr1_2:77496934-77496953 Msa0094290:intron 20.0%
!!! AGTTTATTTTTACAAGAGAA+AGG + chr1_2:77497269-77497288 Msa0094290:intron 20.0%
!! GAACCAAAAAAAAAAACAAT+AGG - chr1_2:77497492-77497511 None:intergenic 20.0%
!!! ACACCCTATTTTTTTTTTTT+TGG + chr1_2:77497608-77497627 Msa0094290:intron 20.0%
!!! ATGATAAAGCATTAACAATA+GGG - chr1_2:77497785-77497804 None:intergenic 20.0%
!!! AATGATAAAGCATTAACAAT+AGG - chr1_2:77497786-77497805 None:intergenic 20.0%
!! AAAATGCTATGATTATATCA+TGG - chr1_2:77497844-77497863 None:intergenic 20.0%
!! ATCTAAAGGTGAAAAAAAAA+TGG - chr1_2:77498046-77498065 None:intergenic 20.0%
!!! TTTGAAGCTTTTTAAATTCT+TGG + chr1_2:77498304-77498323 Msa0094290:intron 20.0%
!!! GGGTTTTATTTTGAAAAAAT+TGG - chr1_2:77498354-77498373 None:intergenic 20.0%
!! AAAAAAAAAACCCAGAAATT+TGG + chr1_2:77498459-77498478 Msa0094290:intron 20.0%
!! TTGCATTGTTAATAATGAAT+TGG + chr1_2:77499002-77499021 Msa0094290:intron 20.0%
!! ATGATTAAAATTGCTTGATT+TGG + chr1_2:77499059-77499078 Msa0094290:intron 20.0%
!! TATAGAGAAAATTCAATTAG+AGG + chr1_2:77499091-77499110 Msa0094290:intron 20.0%
!! ATAGAGAAAATTCAATTAGA+GGG + chr1_2:77499092-77499111 Msa0094290:intron 20.0%
!! ATCAATAACTAATCTTTATG+GGG - chr1_2:77499146-77499165 None:intergenic 20.0%
!!! TATCAATACAAAGTCTTTTA+AGG - chr1_2:77499280-77499299 None:intergenic 20.0%
!!! AAAGATGACTAATTTTAAGT+GGG - chr1_2:77499544-77499563 None:intergenic 20.0%
!!! AAAAGATGACTAATTTTAAG+TGG - chr1_2:77499545-77499564 None:intergenic 20.0%
!!! GTTTTTAGTTTTTTTCAAAG+TGG - chr1_2:77499728-77499747 None:intergenic 20.0%
!!! GACTTTTAACATAATATATG+TGG + chr1_2:77499845-77499864 Msa0094290:intron 20.0%
!!! TAAACTTAGTTACTTTAAGT+TGG + chr1_2:77500029-77500048 Msa0094290:intron 20.0%
!!! ACTATCACTTTAGTTTTTAT+AGG - chr1_2:77500147-77500166 None:intergenic 20.0%
!!! GATTTTTTGCCTTAAATATA+TGG - chr1_2:77500486-77500505 None:intergenic 20.0%
!! ACAACATAATTTCCTATATA+TGG + chr1_2:77500670-77500689 Msa0094290:intron 20.0%
!!! TTTTGATCAAATGACATTTA+GGG - chr1_2:77500762-77500781 None:intergenic 20.0%
!!! TTTTTGATCAAATGACATTT+AGG - chr1_2:77500763-77500782 None:intergenic 20.0%
!! TCATTTGATCAAAAACTATT+TGG + chr1_2:77500768-77500787 Msa0094290:intron 20.0%
! TTTATCATGAGAAGAGAAAT+GGG - chr1_2:77493666-77493685 None:intergenic 25.0%
! TTCAAAACATTGAAAAGATG+GGG - chr1_2:77493795-77493814 None:intergenic 25.0%
!!! AAAAGATGGGGTTTTTATTT+GGG - chr1_2:77493826-77493845 None:intergenic 25.0%
!! AAAAAGATGGGGTTTTTATT+TGG - chr1_2:77493827-77493846 None:intergenic 25.0%
! GTAAAGACAAAAAAAAGATG+GGG - chr1_2:77493838-77493857 None:intergenic 25.0%
! GTCTTTACAACTATATATGT+AGG + chr1_2:77493850-77493869 Msa0094290:five_prime_UTR 25.0%
!! TCTTTTCTCATTTCAATTTG+TGG - chr1_2:77493898-77493917 None:intergenic 25.0%
! AAAGGTAGATCTAATAAACA+AGG + chr1_2:77493990-77494009 Msa0094290:five_prime_UTR 25.0%
! AAGGTAGATCTAATAAACAA+GGG + chr1_2:77493991-77494010 Msa0094290:five_prime_UTR 25.0%
! TAATAAACAAGGGAAAAGAA+GGG + chr1_2:77494001-77494020 Msa0094290:five_prime_UTR 25.0%
! GCTTTGTGAACTATATATTT+GGG - chr1_2:77494261-77494280 None:intergenic 25.0%
!! AGCTTTGTGAACTATATATT+TGG - chr1_2:77494262-77494281 None:intergenic 25.0%
! TGTCATTCTAAATTGCTTTA+AGG + chr1_2:77494456-77494475 Msa0094290:intron 25.0%
! TAAGAGAAAAAAAGATGTGT+TGG + chr1_2:77494495-77494514 Msa0094290:intron 25.0%
!!! CGAGTTTTTAGTTTTATTGT+TGG + chr1_2:77494573-77494592 Msa0094290:intron 25.0%
!!! TGTTAATGTCATTTTCTTGA+TGG + chr1_2:77494702-77494721 Msa0094290:intron 25.0%
!! AATTGAACAAATCAGCATTT+TGG + chr1_2:77494764-77494783 Msa0094290:intron 25.0%
!! ATTGAACAAATCAGCATTTT+GGG + chr1_2:77494765-77494784 Msa0094290:intron 25.0%
! GCAACAAAAATGATAAATGA+AGG + chr1_2:77494817-77494836 Msa0094290:intron 25.0%
! CAAAAATGATAAATGAAGGA+TGG + chr1_2:77494821-77494840 Msa0094290:intron 25.0%
!!! TGGTTTTGTTCTGTTTAAAA+AGG + chr1_2:77494841-77494860 Msa0094290:intron 25.0%
!!! GGTTTTGTTCTGTTTAAAAA+GGG + chr1_2:77494842-77494861 Msa0094290:intron 25.0%
! GATCTTAGAAAAATGATCAT+TGG - chr1_2:77494974-77494993 None:intergenic 25.0%
! TTTAACAGTCCCTTAATATA+TGG + chr1_2:77495054-77495073 Msa0094290:intron 25.0%
! TTAACAGTCCCTTAATATAT+GGG + chr1_2:77495055-77495074 Msa0094290:intron 25.0%
!! TAAATTAAATAAGTACCGTG+AGG - chr1_2:77495215-77495234 None:intergenic 25.0%
! GGAAATCTATCTCAAAAATA+TGG + chr1_2:77495592-77495611 Msa0094290:five_prime_UTR 25.0%
!! ATTATTTCTTTGGCTATATC+AGG - chr1_2:77495670-77495689 None:intergenic 25.0%
!! ATGATCTTTCTTTTGTTCAT+AGG + chr1_2:77495698-77495717 Msa0094290:CDS 25.0%
!! GATTCATAGGATAGTATTTT+AGG - chr1_2:77495739-77495758 None:intergenic 25.0%
! AAGCTTATACAATCTATTCA+AGG + chr1_2:77495883-77495902 Msa0094290:CDS 25.0%
!!! GCTATTTTAGTAATATCAAG+TGG - chr1_2:77495922-77495941 None:intergenic 25.0%
! TACTAAAATAGCTTTCTCTT+TGG + chr1_2:77495930-77495949 Msa0094290:CDS 25.0%
!!! TGAACTTTTGTTTTTGCTTA+AGG + chr1_2:77496005-77496024 Msa0094290:CDS 25.0%
! GATGAATAGGTTTAAATGAA+GGG - chr1_2:77496074-77496093 None:intergenic 25.0%
! AGATGAATAGGTTTAAATGA+AGG - chr1_2:77496075-77496094 None:intergenic 25.0%
! AACCTATTCATCTAATTACT+AGG + chr1_2:77496082-77496101 Msa0094290:CDS 25.0%
! AACCTAGTAATTAGATGAAT+AGG - chr1_2:77496087-77496106 None:intergenic 25.0%
! AATTCTTTGAATCGTTTACT+TGG + chr1_2:77496322-77496341 Msa0094290:intron 25.0%
! GTTATTGATCCAATAATACT+TGG + chr1_2:77496419-77496438 Msa0094290:intron 25.0%
! TAATACTTGGTCATAATTTC+AGG + chr1_2:77496432-77496451 Msa0094290:intron 25.0%
! TTATTGATCCAATAATTGAG+AGG + chr1_2:77496517-77496536 Msa0094290:intron 25.0%
! TATTGATCCAATAATTGAGA+GGG + chr1_2:77496518-77496537 Msa0094290:intron 25.0%
!! GCATTTTCTCTTTACTATAA+TGG - chr1_2:77496857-77496876 None:intergenic 25.0%
!!! CTTATCCATTTTTTGATACA+TGG - chr1_2:77496942-77496961 None:intergenic 25.0%
! CATGTATCAAAAAATGGATA+AGG + chr1_2:77496940-77496959 Msa0094290:intron 25.0%
!!! CACCCTATTGTTTTTTTTTT+TGG + chr1_2:77497486-77497505 Msa0094290:intron 25.0%
! TCATGTAAATACAACTCATT+TGG + chr1_2:77497923-77497942 Msa0094290:intron 25.0%
! TGAGTTTAAATACTAGAGTA+CGG + chr1_2:77497977-77497996 Msa0094290:intron 25.0%
! TAGTAGGTGATTTAATCTAA+AGG - chr1_2:77498060-77498079 None:intergenic 25.0%
! AACATGAAGAGAAGAATATT+TGG - chr1_2:77498230-77498249 None:intergenic 25.0%
!!! GGATGAAAACTAATTTTTTC+TGG - chr1_2:77498268-77498287 None:intergenic 25.0%
! TCAAACTTGTAGATTTATGA+TGG - chr1_2:77498289-77498308 None:intergenic 25.0%
! TATCAACTCAAATTATTCTC+TGG - chr1_2:77498549-77498568 None:intergenic 25.0%
!! ACAAGTCATTATTTCTTGAT+GGG + chr1_2:77498642-77498661 Msa0094290:intron 25.0%
!! ATTATTTCTTGATGGGATAA+TGG + chr1_2:77498649-77498668 Msa0094290:intron 25.0%
! ACTCAAAAACAACATAAATC+TGG - chr1_2:77498798-77498817 None:intergenic 25.0%
!!! TTTATGTTGTTTTTGAGTTG+TGG + chr1_2:77498800-77498819 Msa0094290:intron 25.0%
! ACGAGAGAAATAAAATGATT+TGG + chr1_2:77498852-77498871 Msa0094290:intron 25.0%
!!! AGAAATAAAATGATTTGGTG+TGG + chr1_2:77498857-77498876 Msa0094290:intron 25.0%
! AATCTAAACCACAGAAAAAA+TGG + chr1_2:77498911-77498930 Msa0094290:intron 25.0%
!! TAATAATGAATTGGTTCAAG+TGG + chr1_2:77499011-77499030 Msa0094290:intron 25.0%
!!! TTGGAACTTTTGAAACTTAA+AGG - chr1_2:77499413-77499432 None:intergenic 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG - chr1_2:77499654-77499673 None:intergenic 25.0%
! GAAACGATTCAAAAACTAAA+AGG - chr1_2:77499644-77499663 None:intergenic 25.0%
! GAAACGATTCAAAAACTAAA+AGG + chr1_2:77499644-77499663 Msa0094290:intron 25.0%
!! TGAAACTTAAAGACTTGTTT+AGG + chr1_2:77499683-77499702 Msa0094290:intron 25.0%
!!! TTAGGACTTTTGAAACTTAA+AGG + chr1_2:77499701-77499720 Msa0094290:intron 25.0%
! TAAAGTGATAGTAAATGCAT+GGG + chr1_2:77500155-77500174 Msa0094290:intron 25.0%
! GTGCTATAAAAAACCTATAA+AGG - chr1_2:77500519-77500538 None:intergenic 25.0%
! AAAAAAGAAGGTAAATGACT+TGG - chr1_2:77500567-77500586 None:intergenic 25.0%
!!! ATGACTTGCTTAAAAAAAGA+AGG - chr1_2:77500579-77500598 None:intergenic 25.0%
! AGGAAATAAAAAACACTAGA+TGG - chr1_2:77500727-77500746 None:intergenic 25.0%
! GGTTTAATCATCTTAAATCA+AGG - chr1_2:77500824-77500843 None:intergenic 25.0%
! ATCTTAGTAAGTTAAAACAC+CGG + chr1_2:77500953-77500972 Msa0094290:intron 25.0%
! TTACACATTGAAAATGTAGT+TGG - chr1_2:77501032-77501051 None:intergenic 25.0%
!!! GGTACTTACTTTTTTTTTGA+GGG - chr1_2:77501210-77501229 None:intergenic 25.0%
! AATTTCTGCTTATAAGTTCT+TGG - chr1_2:77501450-77501469 None:intergenic 25.0%
! TACTAAAATAGCTTTCTCTT+TGG + chr1_2:77495930-77495949 Msa0094290:CDS 25.0%
! AAACTATTCACCTTATTACT+AGG + chr1_2:77502069-77502088 Msa0094290:CDS 25.0%
GTTTATCATGAGAAGAGAAA+TGG - chr1_2:77493667-77493686 None:intergenic 30.0%
!!! AAAAGATGGGGTTTTGATTT+GGG - chr1_2:77493783-77493802 None:intergenic 30.0%
AAGCGAAAAATGCAACAAAA+AGG + chr1_2:77493972-77493991 Msa0094290:five_prime_UTR 30.0%
CTAATAAACAAGGGAAAAGA+AGG + chr1_2:77494000-77494019 Msa0094290:five_prime_UTR 30.0%
AATAAACAAGGGAAAAGAAG+GGG + chr1_2:77494002-77494021 Msa0094290:five_prime_UTR 30.0%
!! AAAGAAGGGGTTGATAATAA+TGG + chr1_2:77494015-77494034 Msa0094290:five_prime_UTR 30.0%
!! TATTGTGTTTAGCTTTAGAG+AGG + chr1_2:77494074-77494093 Msa0094290:five_prime_UTR 30.0%
!! ATCAACACTTTTAGAAGACT+CGG - chr1_2:77494142-77494161 None:intergenic 30.0%
!!! TTGGTATGTGATGGTTTTTT+GGG + chr1_2:77494514-77494533 Msa0094290:intron 30.0%
AGAACATTCATCTTCTTCAT+TGG - chr1_2:77494553-77494572 None:intergenic 30.0%
TAAAGTTGAAGAATCACACT+TGG - chr1_2:77494901-77494920 None:intergenic 30.0%
AAGTTTGAATTGTATCGTCT+TGG - chr1_2:77494950-77494969 None:intergenic 30.0%
ATCACTTAAATTCACAACCA+TGG + chr1_2:77494991-77495010 Msa0094290:intron 30.0%
TTTCGTGTTCATTTAAACCA+TGG - chr1_2:77495011-77495030 None:intergenic 30.0%
!! ATAGCCCATAACGTTTTAAT+TGG + chr1_2:77495031-77495050 Msa0094290:intron 30.0%
TGCTGTTACCCATATATTAA+GGG - chr1_2:77495066-77495085 None:intergenic 30.0%
ACTATTTGACATTTCGATAC+CGG - chr1_2:77495161-77495180 None:intergenic 30.0%
GTATCGAAATGTCAAATAGT+AGG + chr1_2:77495161-77495180 Msa0094290:intron 30.0%
AAGTAAGAAGAAGATGAATG+AGG - chr1_2:77495434-77495453 None:intergenic 30.0%
AAAGTCAAGGAGAGAAATTT+GGG + chr1_2:77495478-77495497 Msa0094290:five_prime_UTR 30.0%
!! TGCAATATCTGTTGATTCAT+AGG - chr1_2:77495752-77495771 None:intergenic 30.0%
AGAACTTCTTAGTGCTAAAA+GGG + chr1_2:77495822-77495841 Msa0094290:CDS 30.0%
! TACTAGGTTGAAAGCTAAAT+TGG + chr1_2:77496098-77496117 Msa0094290:CDS 30.0%
TGACATTGTTATCTGTGATT+GGG - chr1_2:77496263-77496282 None:intergenic 30.0%
TTGACATTGTTATCTGTGAT+TGG - chr1_2:77496264-77496283 None:intergenic 30.0%
ATGATAACTAACCCATATGA+CGG - chr1_2:77496289-77496308 None:intergenic 30.0%
GTTTACTTGGTCATAATTTC+AGG + chr1_2:77496335-77496354 Msa0094290:intron 30.0%
ATTGATCCAATAATTGAGAG+GGG + chr1_2:77496519-77496538 Msa0094290:intron 30.0%
TCTCTTTACTATAATGGTGA+TGG - chr1_2:77496851-77496870 None:intergenic 30.0%
ATTCGCTTTCGTTAATAGAT+TGG - chr1_2:77496893-77496912 None:intergenic 30.0%
ACCTTAAGATATGAACAGTT+CGG - chr1_2:77497000-77497019 None:intergenic 30.0%
ATCATCTGATTGAGATTGAA+TGG - chr1_2:77497069-77497088 None:intergenic 30.0%
AGCATTGCTTTATATTACGA+AGG - chr1_2:77497196-77497215 None:intergenic 30.0%
TCGTAAAAATGGTTTAAAGG+CGG - chr1_2:77497452-77497471 None:intergenic 30.0%
GTCTCGTAAAAATGGTTTAA+AGG - chr1_2:77497455-77497474 None:intergenic 30.0%
CTAATATGGTCTCGTAAAAA+TGG - chr1_2:77497463-77497482 None:intergenic 30.0%
TCGTAAAAATGGTTTAAAGG+CGG - chr1_2:77497452-77497471 None:intergenic 30.0%
GTCTCGTAAAAATGGTTTAA+AGG - chr1_2:77497455-77497474 None:intergenic 30.0%
CTAATATGGTCTCGTAAAAA+TGG - chr1_2:77497463-77497482 None:intergenic 30.0%
AAAATAGGGTGTGTCTAATA+TGG - chr1_2:77497600-77497619 None:intergenic 30.0%
!! TGGAGATATTTTTGAAAGTG+TGG + chr1_2:77497670-77497689 Msa0094290:intron 30.0%
AAACTCACACATTATAAGTG+TGG - chr1_2:77497964-77497983 None:intergenic 30.0%
!!! GAGTACGGTGAATTTTAATT+TGG + chr1_2:77497992-77498011 Msa0094290:intron 30.0%
TAATTTGGACCAGTTTATGT+TGG + chr1_2:77498007-77498026 Msa0094290:intron 30.0%
! GAAATTTTATGGGTCAGATT+TGG - chr1_2:77498106-77498125 None:intergenic 30.0%
! GAGAGAGAGAGAAATTTTAT+GGG - chr1_2:77498116-77498135 None:intergenic 30.0%
! AGAGAGAGAGAGAAATTTTA+TGG - chr1_2:77498117-77498136 None:intergenic 30.0%
TCTTAGAAACTCAAGAACAA+TGG - chr1_2:77498403-77498422 None:intergenic 30.0%
AAAATCATGGGAATAAAGTC+TGG - chr1_2:77498433-77498452 None:intergenic 30.0%
AATATGAGAGGAAGAAGAAA+GGG - chr1_2:77498488-77498507 None:intergenic 30.0%
AAATATGAGAGGAAGAAGAA+AGG - chr1_2:77498489-77498508 None:intergenic 30.0%
CAAAGCAATAGAAATATGAG+AGG - chr1_2:77498500-77498519 None:intergenic 30.0%
TAAAGCATGTGGAAAAACTT+TGG + chr1_2:77498598-77498617 Msa0094290:intron 30.0%
AAAGCATGTGGAAAAACTTT+GGG + chr1_2:77498599-77498618 Msa0094290:intron 30.0%
!!! GGAAAAACTTTGGGATTTTA+AGG + chr1_2:77498608-77498627 Msa0094290:intron 30.0%
! GACAAGTCATTATTTCTTGA+TGG + chr1_2:77498641-77498660 Msa0094290:intron 30.0%
!! TTGATGGGATAATGGAATTA+TGG + chr1_2:77498657-77498676 Msa0094290:intron 30.0%
ATGAGAATGAAGATAAAGGT+GGG + chr1_2:77498719-77498738 Msa0094290:intron 30.0%
!! ATAAAATGATTTGGTGTGGA+TGG + chr1_2:77498861-77498880 Msa0094290:intron 30.0%
GGATGGTACATAAAATGATT+TGG + chr1_2:77498878-77498897 Msa0094290:intron 30.0%
! TGGTACATAAAATGATTTGG+TGG + chr1_2:77498881-77498900 Msa0094290:intron 30.0%
!! GGTACATAAAATGATTTGGT+GGG + chr1_2:77498882-77498901 Msa0094290:intron 30.0%
!!! AACTTAGACCATTTTTTCTG+TGG - chr1_2:77498922-77498941 None:intergenic 30.0%
! CTAAGTTGAACCAATCTAAT+TGG + chr1_2:77498935-77498954 Msa0094290:intron 30.0%
TGTGGTGATATCATGTTTAT+AGG - chr1_2:77499188-77499207 None:intergenic 30.0%
TTTAGATGCATTTGACCAAT+AGG - chr1_2:77499356-77499375 None:intergenic 30.0%
TATTGGTCAAATGCATCTAA+AGG + chr1_2:77499355-77499374 Msa0094290:intron 30.0%
GGGAAAAACGAAAAACTTAA+AGG - chr1_2:77499382-77499401 None:intergenic 30.0%
GAAACTTAAAGGACTACTTT+GGG - chr1_2:77499402-77499421 None:intergenic 30.0%
TGAAACTTAAAGGACTACTT+TGG - chr1_2:77499403-77499422 None:intergenic 30.0%
CCAACTATGTTATCTACATT+AGG - chr1_2:77499473-77499492 None:intergenic 30.0%
CCTAATGTAGATAACATAGT+TGG + chr1_2:77499470-77499489 Msa0094290:intron 30.0%
!! ACTAATTTTAAGTGGGTGTT+AGG - chr1_2:77499537-77499556 None:intergenic 30.0%
!! ATCTTTTTAGGCATGACAAA+TGG + chr1_2:77499558-77499577 Msa0094290:intron 30.0%
! TTTCAAACAAGTCCTTTTAG+AGG - chr1_2:77499628-77499647 None:intergenic 30.0%
ATTTGACCAAACCTATTTGT+AGG + chr1_2:77499767-77499786 Msa0094290:intron 30.0%
ATAATATATGTGGAATGACC+AGG + chr1_2:77499855-77499874 Msa0094290:intron 30.0%
CTAAAGTGATAGTAAATGCA+TGG + chr1_2:77500154-77500173 Msa0094290:intron 30.0%
ATTATTGTACCACTTCAACT+GGG + chr1_2:77500365-77500384 Msa0094290:intron 30.0%
ATTCCGACACCATATATTTA+AGG + chr1_2:77500474-77500493 Msa0094290:intron 30.0%
TTGCCTTAAATATATGGTGT+CGG - chr1_2:77500480-77500499 None:intergenic 30.0%
ATCCTCATGTAATCCTTTAT+AGG + chr1_2:77500503-77500522 Msa0094290:intron 30.0%
AACCTATAAAGGATTACATG+AGG - chr1_2:77500508-77500527 None:intergenic 30.0%
GACATCGTTAATCCATATAT+AGG - chr1_2:77500685-77500704 None:intergenic 30.0%
ACTATTTGGATTTCTCCATT+TGG + chr1_2:77500782-77500801 Msa0094290:intron 30.0%
ATATGTCTTATCGTTCCAAA+TGG - chr1_2:77500800-77500819 None:intergenic 30.0%
ATCTCATCAACTCTTCAATA+AGG - chr1_2:77500929-77500948 None:intergenic 30.0%
CATAATAAACATAGCCCATA+GGG - chr1_2:77500988-77501007 None:intergenic 30.0%
TCATAATAAACATAGCCCAT+AGG - chr1_2:77500989-77501008 None:intergenic 30.0%
!!! TACTTTTTTTGTGACCACAT+AGG + chr1_2:77501124-77501143 Msa0094290:intron 30.0%
!!! ACTTACTTTTTTTTTGAGGG+AGG - chr1_2:77501207-77501226 None:intergenic 30.0%
!!! GGGTACTTACTTTTTTTTTG+AGG - chr1_2:77501211-77501230 None:intergenic 30.0%
AGATGAATGAGAAAATGTAG+AGG - chr1_2:77501356-77501375 None:intergenic 30.0%
CGAAATCTGTCACAAAAATA+TGG + chr1_2:77501579-77501598 Msa0094290:intron 30.0%
ATATCTCTTTGGCTAAATCA+GGG - chr1_2:77501656-77501675 None:intergenic 30.0%
AATATCTCTTTGGCTAAATC+AGG - chr1_2:77501657-77501676 None:intergenic 30.0%
GAATCATAGGCTAATATGTT+AGG - chr1_2:77501726-77501745 None:intergenic 30.0%
GACAATATCTGTTGAATCAT+AGG - chr1_2:77501739-77501758 None:intergenic 30.0%
AGAACTTCTTAGTGCTAAAA+GGG + chr1_2:77495822-77495841 Msa0094290:CDS 30.0%
AAGCTTATACAATCCATTCA+AGG + chr1_2:77501870-77501889 Msa0094290:intron 30.0%
!!! GCTATTTTAGTAACATCAAG+TGG - chr1_2:77501909-77501928 None:intergenic 30.0%
!!! GGTGAATAGTTTTGAATGAA+GGG - chr1_2:77502061-77502080 None:intergenic 30.0%
!!! AGGTGAATAGTTTTGAATGA+AGG - chr1_2:77502062-77502081 None:intergenic 30.0%
!! TAGCTTTAGTCCTAGTAATA+AGG - chr1_2:77502082-77502101 None:intergenic 30.0%
AACATAGAAGAATCTGGATG+AGG - chr1_2:77493634-77493653 None:intergenic 35.0%
GTGAAGAACATAGAAGAATC+TGG - chr1_2:77493640-77493659 None:intergenic 35.0%
ACAATCAAACCAAAGAGAAG+TGG - chr1_2:77493715-77493734 None:intergenic 35.0%
!!! GAAAAGATGGGGTTTTGATT+TGG - chr1_2:77493784-77493803 None:intergenic 35.0%
TGACAAGAAAAAAGACAGCA+AGG + chr1_2:77493927-77493946 Msa0094290:five_prime_UTR 35.0%
! TTGTTGCATTTTTCGCTTGA+AGG - chr1_2:77493970-77493989 None:intergenic 35.0%
!! ACTTTTAGAAGACTCGGATT+TGG - chr1_2:77494136-77494155 None:intergenic 35.0%
!! GAGTCTTCTAAAAGTGTTGA+TGG + chr1_2:77494141-77494160 Msa0094290:five_prime_UTR 35.0%
AAACCAAGCATTACAGATTC+TGG - chr1_2:77494309-77494328 None:intergenic 35.0%
ATCAAAATCACCACCAAAAG+CGG + chr1_2:77494349-77494368 Msa0094290:intron 35.0%
AGAAATCAAGCGAGAAAACA+CGG - chr1_2:77494398-77494417 None:intergenic 35.0%
! AAAGATGTGTTGGTATGTGA+TGG + chr1_2:77494505-77494524 Msa0094290:intron 35.0%
!!! GTTGGTATGTGATGGTTTTT+TGG + chr1_2:77494513-77494532 Msa0094290:intron 35.0%
!! AGCATTTTGGGAGGATAAAA+TGG + chr1_2:77494777-77494796 Msa0094290:intron 35.0%
!! ATTTTGGGAGGATAAAATGG+AGG + chr1_2:77494780-77494799 Msa0094290:intron 35.0%
!! TTTTGGGAGGATAAAATGGA+GGG + chr1_2:77494781-77494800 Msa0094290:intron 35.0%
! GTGCTGTTACCCATATATTA+AGG - chr1_2:77495067-77495086 None:intergenic 35.0%
TACAATAGACTCAACCACAA+CGG - chr1_2:77495120-77495139 None:intergenic 35.0%
CTATTTGACATTTCGATACC+GGG - chr1_2:77495160-77495179 None:intergenic 35.0%
CGAGAAGATCAATTTCAAAG+TGG + chr1_2:77495347-77495366 Msa0094290:intron 35.0%
TGAGGAAATGATCAGGAATA+AGG - chr1_2:77495416-77495435 None:intergenic 35.0%
AGATGAATGAGGAAATGATC+AGG - chr1_2:77495423-77495442 None:intergenic 35.0%
GAAAGTCAAGGAGAGAAATT+TGG + chr1_2:77495477-77495496 Msa0094290:five_prime_UTR 35.0%
TGATGCAAGTTTCCTATTAG+AGG - chr1_2:77495535-77495554 None:intergenic 35.0%
AACTTGCATCAACTAGCATT+AGG + chr1_2:77495544-77495563 Msa0094290:five_prime_UTR 35.0%
GAGATAGATTTCCAAGTGTA+TGG - chr1_2:77495585-77495604 None:intergenic 35.0%
!!! AGGATAGTATTTTAGGACAG+AGG - chr1_2:77495732-77495751 None:intergenic 35.0%
GATATTGCATTTGCTCCATA+TGG + chr1_2:77495763-77495782 Msa0094290:CDS 35.0%
TTGCTCCATATGGTGATTAT+TGG + chr1_2:77495773-77495792 Msa0094290:CDS 35.0%
TGTCTCCAATAATCACCATA+TGG - chr1_2:77495781-77495800 None:intergenic 35.0%
CAGAACTTCTTAGTGCTAAA+AGG + chr1_2:77495821-77495840 Msa0094290:CDS 35.0%
TTCTTCCATTAGAGAAGATG+AGG + chr1_2:77495855-77495874 Msa0094290:CDS 35.0%
TTCTACCTCATCTTCTCTAA+TGG - chr1_2:77495863-77495882 None:intergenic 35.0%
GGAGAATATGCAAAAGAAGT+TGG + chr1_2:77496119-77496138 Msa0094290:CDS 35.0%
CAATCAAATTCAAACCATGC+CGG + chr1_2:77496174-77496193 Msa0094290:CDS 35.0%
! TAGATTTTCACCTTGAATGC+CGG - chr1_2:77496196-77496215 None:intergenic 35.0%
ATTAGACCCCTCTCAATTAT+TGG - chr1_2:77496528-77496547 None:intergenic 35.0%
TTGCTATGTGACGATTCATT+TGG + chr1_2:77496793-77496812 Msa0094290:intron 35.0%
TGCTATGTGACGATTCATTT+GGG + chr1_2:77496794-77496813 Msa0094290:intron 35.0%
ATTCATTTGGGTAGGTGTTT+GGG + chr1_2:77496806-77496825 Msa0094290:intron 35.0%
ATCGAACGGTAATAAGATGT+CGG - chr1_2:77496971-77496990 None:intergenic 35.0%
TCTTATTACCGTTCGATCTT+TGG + chr1_2:77496974-77496993 Msa0094290:intron 35.0%
ACAATAGGGTGTGTCTAATA+TGG - chr1_2:77497477-77497496 None:intergenic 35.0%
!!! TTTTTGGTTCAATAGCCTAG+TGG + chr1_2:77497502-77497521 Msa0094290:intron 35.0%
!! GATCACACTTTTTGAAAGTG+TGG + chr1_2:77497528-77497547 Msa0094290:intron 35.0%
!!! TTTTTGGTTCAATAGCCTAG+TGG + chr1_2:77497502-77497521 Msa0094290:intron 35.0%
!! GATCACACTTTTTGAAAGTG+TGG + chr1_2:77497528-77497547 Msa0094290:intron 35.0%
!! TTTTTGAAAGTGTGGAGAAG+TGG + chr1_2:77497678-77497697 Msa0094290:intron 35.0%
!! TTTTGAAAGTGTGGAGAAGT+GGG + chr1_2:77497679-77497698 Msa0094290:intron 35.0%
! CTTTCTAGAAAAGTAGAGAC+TGG - chr1_2:77497894-77497913 None:intergenic 35.0%
GAAAAAAAAATGGTCCAAGC+TGG - chr1_2:77498036-77498055 None:intergenic 35.0%
GGTGCATAACAAGATTTAGT+AGG - chr1_2:77498076-77498095 None:intergenic 35.0%
GAAAGGGATTCCAAATTTCT+GGG - chr1_2:77498472-77498491 None:intergenic 35.0%
AGAAAGGGATTCCAAATTTC+TGG - chr1_2:77498473-77498492 None:intergenic 35.0%
TTGTGTTTATCAATGTGTGC+AGG - chr1_2:77498526-77498545 None:intergenic 35.0%
GATAAGATTTGACTGACATG+AGG + chr1_2:77498565-77498584 Msa0094290:intron 35.0%
GATTCAAGGTATAAAGCATG+TGG + chr1_2:77498587-77498606 Msa0094290:intron 35.0%
AATGGAATTATGGAAAGCCA+AGG + chr1_2:77498667-77498686 Msa0094290:intron 35.0%
GTCGATGAGAATGAAGATAA+AGG + chr1_2:77498715-77498734 Msa0094290:intron 35.0%
GATGAGAATGAAGATAAAGG+TGG + chr1_2:77498718-77498737 Msa0094290:intron 35.0%
! AATGAAGATAAAGGTGGGTT+GGG + chr1_2:77498724-77498743 Msa0094290:intron 35.0%
!!! ATGTTGTTTTTGAGTTGTGG+TGG + chr1_2:77498803-77498822 Msa0094290:intron 35.0%
AGTTGAACCAATCTAATTGG+TGG + chr1_2:77498938-77498957 Msa0094290:intron 35.0%
!! TTTTTCGGTCAAGTACTCTA+GGG - chr1_2:77498980-77498999 None:intergenic 35.0%
!!! TTTTTTCGGTCAAGTACTCT+AGG - chr1_2:77498981-77499000 None:intergenic 35.0%
!! TTTTTAGGCATGACAAATGG+TGG + chr1_2:77499561-77499580 Msa0094290:intron 35.0%
GTTTGGTCAAATGCATCTAA+AGG - chr1_2:77499759-77499778 None:intergenic 35.0%
!! GAGTGTTACTTAGTAGTTAG+TGG - chr1_2:77499796-77499815 None:intergenic 35.0%
TGATGAAAAATCCAAGAGTG+AGG + chr1_2:77499938-77499957 Msa0094290:CDS 35.0%
TGAAATAAGAGAAGCCTTCA+AGG + chr1_2:77499975-77499994 Msa0094290:intron 35.0%
GAAATAAGAGAAGCCTTCAA+GGG + chr1_2:77499976-77499995 Msa0094290:intron 35.0%
AATTCTCTTCTTTCCCTTGA+AGG - chr1_2:77499992-77500011 None:intergenic 35.0%
ATAGTAAATGCATGGGTACT+GGG + chr1_2:77500162-77500181 Msa0094290:intron 35.0%
TCTGCGTCATACCAATAATT+GGG - chr1_2:77500195-77500214 None:intergenic 35.0%
!!! AGTTTTGAGTACATCCCTTT+TGG + chr1_2:77500276-77500295 Msa0094290:intron 35.0%
!! GTTTTGAGTACATCCCTTTT+GGG + chr1_2:77500277-77500296 Msa0094290:intron 35.0%
!! TTTTGAGTACATCCCTTTTG+GGG + chr1_2:77500278-77500297 Msa0094290:intron 35.0%
! GTGTGTCCTGGAATTTTATT+TGG + chr1_2:77500312-77500331 Msa0094290:intron 35.0%
GCTAAGCCAAATAAAATTCC+AGG - chr1_2:77500321-77500340 None:intergenic 35.0%
CATTATTGTACCACTTCAAC+TGG + chr1_2:77500364-77500383 Msa0094290:intron 35.0%
! GACATTTAGGGTTCAAGAAT+GGG - chr1_2:77500750-77500769 None:intergenic 35.0%
! TGACATTTAGGGTTCAAGAA+TGG - chr1_2:77500751-77500770 None:intergenic 35.0%
CAAGCCAATTTCAAATGCTA+TGG + chr1_2:77500859-77500878 Msa0094290:intron 35.0%
! GTAGCCATAGCATTTGAAAT+TGG - chr1_2:77500866-77500885 None:intergenic 35.0%
!! ACATAGGTTATGAAAGCGTT+CGG + chr1_2:77501140-77501159 Msa0094290:intron 35.0%
!!! TTGAGGGAGGTACTTTTTAT+GGG - chr1_2:77501194-77501213 None:intergenic 35.0%
!!! TTTGAGGGAGGTACTTTTTA+TGG - chr1_2:77501195-77501214 None:intergenic 35.0%
!!! AGCACGCAAGTTTTTTTTAG+GGG - chr1_2:77501231-77501250 None:intergenic 35.0%
!!! CAGCACGCAAGTTTTTTTTA+GGG - chr1_2:77501232-77501251 None:intergenic 35.0%
CTAAAAAAAACTTGCGTGCT+GGG + chr1_2:77501231-77501250 Msa0094290:intron 35.0%
CGAGAAGATCAATTTCAAAG+TGG + chr1_2:77495347-77495366 Msa0094290:intron 35.0%
ACCATAGAACAGTGTGAAAT+TGG - chr1_2:77501306-77501325 None:intergenic 35.0%
GAATGAGAAAATGTAGAGGA+AGG - chr1_2:77501352-77501371 None:intergenic 35.0%
GAAATTCAAAGTGACAAGTG+TGG + chr1_2:77501464-77501483 Msa0094290:intron 35.0%
TGGTTTATAAACTTCCACCA+GGG + chr1_2:77501484-77501503 Msa0094290:intron 35.0%
AATAGGAAGCTTACACCAAT+TGG + chr1_2:77501524-77501543 Msa0094290:intron 35.0%
TATCTCTTTGGCTAAATCAG+GGG - chr1_2:77501655-77501674 None:intergenic 35.0%
ACGTGTCTTCAATATCTCTT+TGG - chr1_2:77501667-77501686 None:intergenic 35.0%
! ATGTTAGGAGCAATGAGTTT+TGG - chr1_2:77501711-77501730 None:intergenic 35.0%
GATATTGTCTTTGCTCCTTA+CGG + chr1_2:77501750-77501769 Msa0094290:intron 35.0%
GTGATTATTGGAGACAAATG+AGG + chr1_2:77501772-77501791 Msa0094290:intron 35.0%
CAGAACTTCTTAGTGCTAAA+AGG + chr1_2:77495821-77495840 Msa0094290:CDS 35.0%
TTCTTCCATTAGAGAAGATG+AGG + chr1_2:77495855-77495874 Msa0094290:CDS 35.0%
TTCTACCTCATCTTCTCTAA+TGG - chr1_2:77495863-77495882 None:intergenic 35.0%
TAGTGAAAGTGAACCTTGAA+TGG - chr1_2:77501886-77501905 None:intergenic 35.0%
CAAACAAATTCAATCCATGC+CGG + chr1_2:77502161-77502180 Msa0094290:CDS 35.0%
! TAGATTTTCACCTTGTATGC+CGG - chr1_2:77502183-77502202 None:intergenic 35.0%
TGACATTGTCTTGTGTGATT+GGG - chr1_2:77502250-77502269 None:intergenic 35.0%
TTGACATTGTCTTGTGTGAT+TGG - chr1_2:77502251-77502270 None:intergenic 35.0%
TCTTGTTCTCCACTTCTCTT+TGG + chr1_2:77493703-77493722 Msa0094290:five_prime_UTR 40.0%
AGCAACCCAAATCCGAAAAT+GGG + chr1_2:77493748-77493767 Msa0094290:five_prime_UTR 40.0%
! TGCTACCCATTTTCGGATTT+GGG - chr1_2:77493756-77493775 None:intergenic 40.0%
! TTGCTACCCATTTTCGGATT+TGG - chr1_2:77493757-77493776 None:intergenic 40.0%
!! GTGTTTAGCTTTAGAGAGGA+TGG + chr1_2:77494078-77494097 Msa0094290:five_prime_UTR 40.0%
TGGATCATTTGATGTAGCCA+CGG + chr1_2:77494098-77494117 Msa0094290:five_prime_UTR 40.0%
!! CAAAGCTTTGTTTGTGCAAC+CGG + chr1_2:77494275-77494294 Msa0094290:intron 40.0%
TCACCAGAATCTGTAATGCT+TGG + chr1_2:77494303-77494322 Msa0094290:intron 40.0%
!! TGGTGGTGATTTTGATGACT+TGG - chr1_2:77494345-77494364 None:intergenic 40.0%
! GAACAAATCAGCATTTTGGG+AGG + chr1_2:77494768-77494787 Msa0094290:intron 40.0%
!! GGTCGAAGAGTTTTGTCTTT+TGG - chr1_2:77494880-77494899 None:intergenic 40.0%
TCCATGGCATAGAGTGAAAT+TGG - chr1_2:77495379-77495398 None:intergenic 40.0%
GGTAGCAGATTTGAATTCCA+TGG - chr1_2:77495395-77495414 None:intergenic 40.0%
TTGCATCAACTAGCATTAGG+AGG + chr1_2:77495547-77495566 Msa0094290:five_prime_UTR 40.0%
AGATTTCCAAGTGTATGGTG+TGG - chr1_2:77495580-77495599 None:intergenic 40.0%
ACCTCTTATGCATCTTCAAC+TGG + chr1_2:77495615-77495634 Msa0094290:exon 40.0%
CCTCTTATGCATCTTCAACT+GGG + chr1_2:77495616-77495635 Msa0094290:exon 40.0%
!!! ATTTTAGGACAGAGGAGTTC+TGG - chr1_2:77495724-77495743 None:intergenic 40.0%
GTGATTATTGGAGACAGATG+AGG + chr1_2:77495785-77495804 Msa0094290:CDS 40.0%
TGGTAAGCACCTTAGTTACA+AGG + chr1_2:77495950-77495969 Msa0094290:CDS 40.0%
GGTAAGCACCTTAGTTACAA+GGG + chr1_2:77495951-77495970 Msa0094290:CDS 40.0%
! GTTTTTGCTTAAGGAAGCAG+TGG + chr1_2:77496014-77496033 Msa0094290:CDS 40.0%
ACAATGTCAAAGCCGTCATA+TGG + chr1_2:77496274-77496293 Msa0094290:CDS 40.0%
CAATGTCAAAGCCGTCATAT+GGG + chr1_2:77496275-77496294 Msa0094290:CDS 40.0%
ATGTGACGATTCATTTGGGT+AGG + chr1_2:77496798-77496817 Msa0094290:intron 40.0%
GATTCATTTGGGTAGGTGTT+TGG + chr1_2:77496805-77496824 Msa0094290:intron 40.0%
GCCGAACTGTTCATATCTTA+AGG + chr1_2:77496996-77497015 Msa0094290:intron 40.0%
AAGGACGCATACAACTTACA+AGG + chr1_2:77497148-77497167 Msa0094290:intron 40.0%
! AAAAGTGTGATCTTGCCACT+AGG - chr1_2:77497520-77497539 None:intergenic 40.0%
! AAAAGTGTGATCTTGCCACT+AGG - chr1_2:77497520-77497539 None:intergenic 40.0%
! TTTGAAAGTGTGGAGAAGTG+GGG + chr1_2:77497680-77497699 Msa0094290:intron 40.0%
TATCAGGGACAATGTTTGCA+GGG - chr1_2:77497728-77497747 None:intergenic 40.0%
TACCAACTGAGCTACACTTA+CGG + chr1_2:77497750-77497769 Msa0094290:intron 40.0%
!! TTTATGGGTCAGATTTGGTG+TGG - chr1_2:77498101-77498120 None:intergenic 40.0%
TTGACTGACATGAGGATTCA+AGG + chr1_2:77498573-77498592 Msa0094290:intron 40.0%
ATTATGGAAAGCCAAGGTCA+AGG + chr1_2:77498673-77498692 Msa0094290:intron 40.0%
GAATGAAGATAAAGGTGGGT+TGG + chr1_2:77498723-77498742 Msa0094290:intron 40.0%
!!! TGTTTTTGAGTTGTGGTGGT+TGG + chr1_2:77498807-77498826 Msa0094290:intron 40.0%
!! GGGGAAATCTTTGAGATAGA+AGG - chr1_2:77499127-77499146 None:intergenic 40.0%
! AAGGGTGCATCAAAACCTAT+TGG + chr1_2:77499338-77499357 Msa0094290:intron 40.0%
TGCTACCTTGAACTCATCTT+TGG + chr1_2:77499497-77499516 Msa0094290:intron 40.0%
TGGTACCAAAGATGAGTTCA+AGG - chr1_2:77499505-77499524 None:intergenic 40.0%
CTCATCTTTGGTACCAAATC+TGG + chr1_2:77499509-77499528 Msa0094290:intron 40.0%
CATCACCATCATCCTCTAAA+AGG + chr1_2:77499613-77499632 Msa0094290:intron 40.0%
!! CAAGTCCTTTTAGAGGATGA+TGG - chr1_2:77499621-77499640 None:intergenic 40.0%
TGGATGCCTACAAATAGGTT+TGG - chr1_2:77499776-77499795 None:intergenic 40.0%
! GTTAGTGGATGCCTACAAAT+AGG - chr1_2:77499781-77499800 None:intergenic 40.0%
TTCAGCAACAGCAATAGAGT+GGG + chr1_2:77499903-77499922 Msa0094290:CDS 40.0%
AAATCCAAGAGTGAGGAAGA+AGG + chr1_2:77499945-77499964 Msa0094290:CDS 40.0%
TGGTGATCAAAGAAACCATG+AGG + chr1_2:77500049-77500068 Msa0094290:intron 40.0%
GATAGTAAATGCATGGGTAC+TGG + chr1_2:77500161-77500180 Msa0094290:intron 40.0%
TGGGAAGAGATCCCAATTAT+TGG + chr1_2:77500181-77500200 Msa0094290:intron 40.0%
CTCTGCGTCATACCAATAAT+TGG - chr1_2:77500196-77500215 None:intergenic 40.0%
CAGAGAAGTTTATACCTGAG+AGG + chr1_2:77500211-77500230 Msa0094290:intron 40.0%
TGGTACAATAATGCAGCAAG+AGG - chr1_2:77500357-77500376 None:intergenic 40.0%
TTCAACTGGGAACTTCCTAA+TGG + chr1_2:77500378-77500397 Msa0094290:intron 40.0%
TCCTAATGGAATGAAACCAG+AGG + chr1_2:77500392-77500411 Msa0094290:intron 40.0%
! TCCTCTGGTTTCATTCCATT+AGG - chr1_2:77500396-77500415 None:intergenic 40.0%
TTGGATATGACTGAAGCCTT+TGG + chr1_2:77500417-77500436 Msa0094290:intron 40.0%
! ATGGTGTCGGAATCAAATAC+AGG - chr1_2:77500467-77500486 None:intergenic 40.0%
! ATTTAGGGTTCAAGAATGGG+AGG - chr1_2:77500747-77500766 None:intergenic 40.0%
!!! GGCTTGCTCATGTTTTTTCA+TGG - chr1_2:77500845-77500864 None:intergenic 40.0%
!! TAAGGCTCTTGGCATTGATT+AGG - chr1_2:77500911-77500930 None:intergenic 40.0%
CAACTCTTCAATAAGGCTCT+TGG - chr1_2:77500922-77500941 None:intergenic 40.0%
GTAGTTGGAAGAGATTCAAG+CGG - chr1_2:77501017-77501036 None:intergenic 40.0%
GAACGCTTTCATAACCTATG+TGG - chr1_2:77501141-77501160 None:intergenic 40.0%
!!! CCAGCACGCAAGTTTTTTTT+AGG - chr1_2:77501233-77501252 None:intergenic 40.0%
CCTAAAAAAAACTTGCGTGC+TGG + chr1_2:77501230-77501249 Msa0094290:intron 40.0%
! TGCTGGGTGCTATATATCAT+GGG + chr1_2:77501247-77501266 Msa0094290:intron 40.0%
GCCAATTTCACACTGTTCTA+TGG + chr1_2:77501302-77501321 Msa0094290:intron 40.0%
TGTAGAGGAAGGAAGATTTG+AGG - chr1_2:77501341-77501360 None:intergenic 40.0%
GTGGTTTATAAACTTCCACC+AGG + chr1_2:77501483-77501502 Msa0094290:intron 40.0%
TGGTGTAAGCTTCCTATTAG+AGG - chr1_2:77501522-77501541 None:intergenic 40.0%
! GTGATTTTGCAAAGGCCAAT+TGG - chr1_2:77501542-77501561 None:intergenic 40.0%
! GTGTGGAAGTGATTTTGCAA+AGG - chr1_2:77501550-77501569 None:intergenic 40.0%
AGATTTCGAAGTGTATGGTG+TGG - chr1_2:77501567-77501586 None:intergenic 40.0%
GTGACAGATTTCGAAGTGTA+TGG - chr1_2:77501572-77501591 None:intergenic 40.0%
CCTAGCTGAAGATGCATAAT+AGG - chr1_2:77501606-77501625 None:intergenic 40.0%
CCTATTATGCATCTTCAGCT+AGG + chr1_2:77501603-77501622 Msa0094290:intron 40.0%
TTGCTCCTTACGGTGATTAT+TGG + chr1_2:77501760-77501779 Msa0094290:intron 40.0%
TGTCTCCAATAATCACCGTA+AGG - chr1_2:77501768-77501787 None:intergenic 40.0%
AAACGCTGCTCTTGAAACAA+AGG - chr1_2:77501949-77501968 None:intergenic 40.0%
TTTGTTTCAAGAGCAGCGTT+TGG + chr1_2:77501948-77501967 Msa0094290:intron 40.0%
GCAGAGTATGCAAAAGAAGT+CGG + chr1_2:77502106-77502125 Msa0094290:CDS 40.0%
ACAATGTCAAAGCCGTGATA+TGG + chr1_2:77502261-77502280 Msa0094290:CDS 40.0%
CAATGTCAAAGCCGTGATAT+GGG + chr1_2:77502262-77502281 Msa0094290:CDS 40.0%
CAGCAACCCAAATCCGAAAA+TGG + chr1_2:77493747-77493766 Msa0094290:five_prime_UTR 45.0%
! GGGTTGTTGCTACCCATTTT+CGG - chr1_2:77493763-77493782 None:intergenic 45.0%
CTCAAAGCTAGTGAGTCGAA+AGG + chr1_2:77494176-77494195 Msa0094290:five_prime_UTR 45.0%
ACAGATTCTGGTGAACTCAC+CGG - chr1_2:77494297-77494316 None:intergenic 45.0%
TTCTTGATGGAAATGCCACC+TGG + chr1_2:77494715-77494734 Msa0094290:intron 45.0%
TCTTGATGGAAATGCCACCT+GGG + chr1_2:77494716-77494735 Msa0094290:intron 45.0%
!! ATGTGGACTAAAAAGCACCC+AGG - chr1_2:77494736-77494755 None:intergenic 45.0%
AACGGTACACAAGGGAAACT+GGG - chr1_2:77495102-77495121 None:intergenic 45.0%
TCAACCACAACGGTACACAA+GGG - chr1_2:77495110-77495129 None:intergenic 45.0%
AGAGTAGAATGTGACTGACC+CGG + chr1_2:77495139-77495158 Msa0094290:intron 45.0%
TAACCATCTCGTTTGCCTCA+CGG + chr1_2:77495197-77495216 Msa0094290:intron 45.0%
GCCAATTTCACTCTATGCCA+TGG + chr1_2:77495375-77495394 Msa0094290:intron 45.0%
CCTATTAGAGGAAGCTTCCA+TGG - chr1_2:77495523-77495542 None:intergenic 45.0%
CCATGGAAGCTTCCTCTAAT+AGG + chr1_2:77495520-77495539 Msa0094290:five_prime_UTR 45.0%
TCACTTCCACACCATACACT+TGG + chr1_2:77495571-77495590 Msa0094290:five_prime_UTR 45.0%
CCCAGTTGAAGATGCATAAG+AGG - chr1_2:77495619-77495638 None:intergenic 45.0%
ACTGGGTGAAATTTCTGCAG+TGG + chr1_2:77495633-77495652 Msa0094290:CDS 45.0%
AAACGCTGCCCTTGTAACTA+AGG - chr1_2:77495962-77495981 None:intergenic 45.0%
TTAGTTACAAGGGCAGCGTT+TGG + chr1_2:77495961-77495980 Msa0094290:CDS 45.0%
AAGGAAGCAGTGGAAATGTG+TGG + chr1_2:77496024-77496043 Msa0094290:CDS 45.0%
! CTTTTGCGTGTTCAGCAAAG+TGG + chr1_2:77496225-77496244 Msa0094290:CDS 45.0%
TAGACTCACAAGTGAACCGT+GGG - chr1_2:77496551-77496570 None:intergenic 45.0%
ATAGACTCACAAGTGAACCG+TGG - chr1_2:77496552-77496571 None:intergenic 45.0%
ATCAGGGACAATGTTTGCAG+GGG - chr1_2:77497727-77497746 None:intergenic 45.0%
CTATCAGGGACAATGTTTGC+AGG - chr1_2:77497729-77497748 None:intergenic 45.0%
!! AGCTCAGTTGGTAGCTATCA+GGG - chr1_2:77497743-77497762 None:intergenic 45.0%
!! TAGCTCAGTTGGTAGCTATC+AGG - chr1_2:77497744-77497763 None:intergenic 45.0%
ACCAACTGAGCTACACTTAC+GGG + chr1_2:77497751-77497770 Msa0094290:intron 45.0%
AGCTGGAGACCAACATAAAC+TGG - chr1_2:77498019-77498038 None:intergenic 45.0%
! GTTTATGTTGGTCTCCAGCT+TGG + chr1_2:77498019-77498038 Msa0094290:intron 45.0%
!!! AAAGGTGGGTTGGGTGATTT+TGG + chr1_2:77498733-77498752 Msa0094290:intron 45.0%
GCTTGCACCACCAATTAGAT+TGG - chr1_2:77498948-77498967 None:intergenic 45.0%
TGGAATGACCAGGATGTGTT+TGG + chr1_2:77499865-77499884 Msa0094290:intron 45.0%
CTTCAGCAACAGCAATAGAG+TGG + chr1_2:77499902-77499921 Msa0094290:CDS 45.0%
GAAGCAACAAAGGAACAGGT+GGG - chr1_2:77500080-77500099 None:intergenic 45.0%
CTTGGAAGCAACAAAGGAAC+AGG - chr1_2:77500084-77500103 None:intergenic 45.0%
CACTCTCTTGGAAGCAACAA+AGG - chr1_2:77500090-77500109 None:intergenic 45.0%
TAGGAAGTTCCCAGTTGAAG+TGG - chr1_2:77500377-77500396 None:intergenic 45.0%
TGGAATGAAACCAGAGGACT+TGG + chr1_2:77500398-77500417 Msa0094290:intron 45.0%
TCAGTCATATCCAAGTCCTC+TGG - chr1_2:77500411-77500430 None:intergenic 45.0%
ACCGGTTAAACAGACCCTAT+GGG + chr1_2:77500971-77500990 Msa0094290:intron 45.0%
!! TTATGAAAGCGTTCGGCAAG+CGG + chr1_2:77501147-77501166 Msa0094290:intron 45.0%
! GTGCTGGGTGCTATATATCA+TGG + chr1_2:77501246-77501265 Msa0094290:intron 45.0%
! GGGTGCTATATATCATGGGA+AGG + chr1_2:77501251-77501270 Msa0094290:intron 45.0%
CTGTTCTATGGTCTATGCCA+TGG + chr1_2:77501314-77501333 Msa0094290:intron 45.0%
! GAAGGAAGATTTGAGGTCCA+TGG - chr1_2:77501334-77501353 None:intergenic 45.0%
CCTATTAGAGGAAGCTTCCA+TGG - chr1_2:77495523-77495542 None:intergenic 45.0%
CCATGGAAGCTTCCTCTAAT+AGG + chr1_2:77495520-77495539 Msa0094290:five_prime_UTR 45.0%
CGAACTTCTGTGTTTGCTCA+AGG + chr1_2:77501992-77502011 Msa0094290:CDS 45.0%
GTGTTTGCTCAAGGAATCAG+TGG + chr1_2:77502001-77502020 Msa0094290:CDS 45.0%
GCTCAAGGAATCAGTGGAAA+TGG + chr1_2:77502007-77502026 Msa0094290:CDS 45.0%
GAATCAGTGGAAATGGCAAG+TGG + chr1_2:77502014-77502033 Msa0094290:CDS 45.0%
! CTTTTGCGCGTTCAACAAAG+TGG + chr1_2:77502212-77502231 Msa0094290:CDS 45.0%
!! TTAAAAAAAAAAAAAAAACT+AGG - chr1_2:77496740-77496759 None:intergenic 5.0%
!!! TAAAACTTTAAAAAAAAAAA+AGG - chr1_2:77497361-77497380 None:intergenic 5.0%
!!! TTTTTTTATAAAAAAATCAT+GGG - chr1_2:77498445-77498464 None:intergenic 5.0%
!!! TTTTTTTTATAAAAAAATCA+TGG - chr1_2:77498446-77498465 None:intergenic 5.0%
GATGTAGCCACGGACAGTAT+TGG + chr1_2:77494108-77494127 Msa0094290:five_prime_UTR 50.0%
TTTGGCACCAATACTGTCCG+TGG - chr1_2:77494118-77494137 None:intergenic 50.0%
!! AGAAAACACGGTGTCGGCTA+CGG - chr1_2:77494386-77494405 None:intergenic 50.0%
CAAGCGAGAAAACACGGTGT+CGG - chr1_2:77494392-77494411 None:intergenic 50.0%
!! TGGACTAAAAAGCACCCAGG+TGG - chr1_2:77494733-77494752 None:intergenic 50.0%
GGGAGGATAAAATGGAGGGT+AGG + chr1_2:77494785-77494804 Msa0094290:intron 50.0%
CAACGGTACACAAGGGAAAC+TGG - chr1_2:77495103-77495122 None:intergenic 50.0%
GTTTCCCTTGTGTACCGTTG+TGG + chr1_2:77495103-77495122 Msa0094290:intron 50.0%
CTCAACCACAACGGTACACA+AGG - chr1_2:77495111-77495130 None:intergenic 50.0%
TTGGGCCATAAACTTCCACC+AGG + chr1_2:77495496-77495515 Msa0094290:five_prime_UTR 50.0%
TGGGCCATAAACTTCCACCA+GGG + chr1_2:77495497-77495516 Msa0094290:five_prime_UTR 50.0%
ATGGCCCTGGTGGAAGTTTA+TGG - chr1_2:77495504-77495523 None:intergenic 50.0%
ATAAACTTCCACCAGGGCCA+TGG + chr1_2:77495503-77495522 Msa0094290:five_prime_UTR 50.0%
GAAGCAGTGGAAATGTGTGG+TGG + chr1_2:77496027-77496046 Msa0094290:CDS 50.0%
TCAAACCATGCCGGCATTCA+AGG + chr1_2:77496183-77496202 Msa0094290:CDS 50.0%
TTTCACCTTGAATGCCGGCA+TGG - chr1_2:77496191-77496210 None:intergenic 50.0%
TTGAGAGGGGTCTAATCCCA+CGG + chr1_2:77496532-77496551 Msa0094290:intron 50.0%
CAGTTCGGCCAAAGATCGAA+CGG - chr1_2:77496985-77497004 None:intergenic 50.0%
TCCCGTAAGTGTAGCTCAGT+TGG - chr1_2:77497755-77497774 None:intergenic 50.0%
!! TGGGTCAGATTTGGTGTGGA+TGG - chr1_2:77498097-77498116 None:intergenic 50.0%
ATGGAAAGCCAAGGTCAAGG+TGG + chr1_2:77498676-77498695 Msa0094290:intron 50.0%
TGGAAAGCCAAGGTCAAGGT+GGG + chr1_2:77498677-77498696 Msa0094290:intron 50.0%
!! TGGTGGTTGGTGATAGACCA+GGG + chr1_2:77498820-77498839 Msa0094290:intron 50.0%
! TTCGGTCAAGTACTCTAGGG+TGG - chr1_2:77498977-77498996 None:intergenic 50.0%
TGGGTGTTAGGAGCCAGATT+TGG - chr1_2:77499525-77499544 None:intergenic 50.0%
!! ACCAGGATGTGTTTGGTGCT+GGG + chr1_2:77499872-77499891 Msa0094290:intron 50.0%
TGTGCCTTCTTCCTCACTCT+TGG - chr1_2:77499952-77499971 None:intergenic 50.0%
AACAGGTGGGTGTAACCTCA+TGG - chr1_2:77500067-77500086 None:intergenic 50.0%
GGAAGCAACAAAGGAACAGG+TGG - chr1_2:77500081-77500100 None:intergenic 50.0%
! TGTTGCTTCCAAGAGAGTGC+AGG + chr1_2:77500091-77500110 Msa0094290:intron 50.0%
! GTTGCTTCCAAGAGAGTGCA+GGG + chr1_2:77500092-77500111 Msa0094290:intron 50.0%
CCAGTGTCATGAAACCTCTC+AGG - chr1_2:77500228-77500247 None:intergenic 50.0%
CCTGAGAGGTTTCATGACAC+TGG + chr1_2:77500225-77500244 Msa0094290:intron 50.0%
! CACCGGTTAAACAGACCCTA+TGG + chr1_2:77500970-77500989 Msa0094290:intron 50.0%
GCCCATAGGGTCTGTTTAAC+CGG - chr1_2:77500975-77500994 None:intergenic 50.0%
ATAAACTTCCACCAGGGCCA+TGG + chr1_2:77495503-77495522 Msa0094290:five_prime_UTR 50.0%
TCAATCCATGCCGGCATACA+AGG + chr1_2:77502170-77502189 Msa0094290:CDS 50.0%
TTTCACCTTGTATGCCGGCA+TGG - chr1_2:77502178-77502197 None:intergenic 50.0%
TCAACAAAGTGGCTGTCTCG+AGG + chr1_2:77502223-77502242 Msa0094290:CDS 50.0%
GTACCGTGAGGCAAACGAGA+TGG - chr1_2:77495203-77495222 None:intergenic 55.0%
GTGTGGAGAAGTGGGGAATC+CGG + chr1_2:77497687-77497706 Msa0094290:intron 55.0%
TGTGGAGAAGTGGGGAATCC+GGG + chr1_2:77497688-77497707 Msa0094290:intron 55.0%
GGAAAGCCAAGGTCAAGGTG+GGG + chr1_2:77498678-77498697 Msa0094290:intron 55.0%
!! GTGGTGGTTGGTGATAGACC+AGG + chr1_2:77498819-77498838 Msa0094290:intron 55.0%
GTGATAGACCAGGGAGAGAG+AGG + chr1_2:77498829-77498848 Msa0094290:intron 55.0%
!! GACCAGGATGTGTTTGGTGC+TGG + chr1_2:77499871-77499890 Msa0094290:intron 55.0%
TCCCAGCACCAAACACATCC+TGG - chr1_2:77499876-77499895 None:intergenic 55.0%
! CTTCCAAGAGAGTGCAGGGA+GGG + chr1_2:77500096-77500115 Msa0094290:intron 55.0%
TGCAGGGAGGGTTGCAAGAT+AGG + chr1_2:77500108-77500127 Msa0094290:intron 55.0%
AGGGAGGGTTGCAAGATAGG+TGG + chr1_2:77500111-77500130 Msa0094290:intron 55.0%
!!! GAGTACATCCCTTTTGGGGC+AGG + chr1_2:77500282-77500301 Msa0094290:intron 55.0%
!!! ACATCCCTTTTGGGGCAGGT+AGG + chr1_2:77500286-77500305 Msa0094290:intron 55.0%
CTCTCCTACCTGCCCCAAAA+GGG - chr1_2:77500293-77500312 None:intergenic 55.0%
ACTCTCCTACCTGCCCCAAA+AGG - chr1_2:77500294-77500313 None:intergenic 55.0%
!! TGAAGCCTTTGGAGCTGCTG+TGG + chr1_2:77500428-77500447 Msa0094290:intron 55.0%
!!! GATGGCGGAACCGCTTTTGG+TGG - chr1_2:77494362-77494381 None:intergenic 60.0%
AGAGGAAGCTTCCATGGCCC+TGG - chr1_2:77495517-77495536 None:intergenic 60.0%
GTGGAGAAGTGGGGAATCCG+GGG + chr1_2:77497689-77497708 Msa0094290:intron 60.0%
GACAATGTTTGCAGGGGCCG+GGG - chr1_2:77497721-77497740 None:intergenic 60.0%
GGACAATGTTTGCAGGGGCC+GGG - chr1_2:77497722-77497741 None:intergenic 60.0%
GGGACAATGTTTGCAGGGGC+CGG - chr1_2:77497723-77497742 None:intergenic 60.0%
AAGCCAAGGTCAAGGTGGGG+TGG + chr1_2:77498681-77498700 Msa0094290:intron 60.0%
AGCCAAGGTCAAGGTGGGGT+GGG + chr1_2:77498682-77498701 Msa0094290:intron 60.0%
TCTCTCGTCCTCTCTCTCCC+TGG - chr1_2:77498840-77498859 None:intergenic 60.0%
! GCTTCCAAGAGAGTGCAGGG+AGG + chr1_2:77500095-77500114 Msa0094290:intron 60.0%
CAACCCTCCCTGCACTCTCT+TGG - chr1_2:77500102-77500121 None:intergenic 60.0%
! GCAGGTAGGAGAGTGTGTCC+TGG + chr1_2:77500300-77500319 Msa0094290:intron 60.0%
CCTAGCCACAGCAGCTCCAA+AGG - chr1_2:77500436-77500455 None:intergenic 60.0%
!! CCTTTGGAGCTGCTGTGGCT+AGG + chr1_2:77500433-77500452 Msa0094290:intron 60.0%
TTGGAGCTGCTGTGGCTAGG+AGG + chr1_2:77500436-77500455 Msa0094290:intron 60.0%
!! TGAAAGCGTTCGGCAAGCGG+TGG + chr1_2:77501150-77501169 Msa0094290:intron 60.0%
AGAGGAAGCTTCCATGGCCC+TGG - chr1_2:77495517-77495536 None:intergenic 60.0%
!!! GGCGATGGCGGAACCGCTTT+TGG - chr1_2:77494365-77494384 None:intergenic 65.0%
GGAAGCTTCCATGGCCCTGG+TGG - chr1_2:77495514-77495533 None:intergenic 65.0%
GGAATCCGGGGTTCGAACCC+CGG + chr1_2:77497701-77497720 Msa0094290:intron 65.0%
CACCCACCCCACCTTGACCT+TGG - chr1_2:77498687-77498706 None:intergenic 65.0%
GGAAGCTTCCATGGCCCTGG+TGG - chr1_2:77495514-77495533 None:intergenic 65.0%
!! GGTGTCGGCTACGGCGATGG+CGG - chr1_2:77494377-77494396 None:intergenic 70.0%
!! CACGGTGTCGGCTACGGCGA+TGG - chr1_2:77494380-77494399 None:intergenic 70.0%
AGGGGCCGGGGTTCGAACCC+CGG - chr1_2:77497709-77497728 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 77493624 77502292 77493624 ID=Msa0094290;Name=Msa0094290
chr1_2 mRNA 77493624 77502292 77493624 ID=Msa0094290-mRNA-1;Parent=Msa0094290;Name=Msa0094290-mRNA-1;_AED=0.31;_eAED=0.31;_QI=735|0.66|0.5|1|0.66|0.75|4|0|367
chr1_2 exon 77493624 77494197 77493624 ID=Msa0094290-mRNA-1:exon:27508;Parent=Msa0094290-mRNA-1
chr1_2 exon 77495461 77496296 77495461 ID=Msa0094290-mRNA-1:exon:27509;Parent=Msa0094290-mRNA-1
chr1_2 exon 77499877 77499971 77499877 ID=Msa0094290-mRNA-1:exon:27510;Parent=Msa0094290-mRNA-1
chr1_2 exon 77501959 77502292 77501959 ID=Msa0094290-mRNA-1:exon:27511;Parent=Msa0094290-mRNA-1
chr1_2 five_prime_UTR 77493624 77494197 77493624 ID=Msa0094290-mRNA-1:five_prime_utr;Parent=Msa0094290-mRNA-1
chr1_2 five_prime_UTR 77495461 77495621 77495461 ID=Msa0094290-mRNA-1:five_prime_utr;Parent=Msa0094290-mRNA-1
chr1_2 CDS 77495622 77496296 77495622 ID=Msa0094290-mRNA-1:cds;Parent=Msa0094290-mRNA-1
chr1_2 CDS 77499877 77499971 77499877 ID=Msa0094290-mRNA-1:cds;Parent=Msa0094290-mRNA-1
chr1_2 CDS 77501959 77502292 77501959 ID=Msa0094290-mRNA-1:cds;Parent=Msa0094290-mRNA-1
Gene Sequence

>Msa0094290

ATGCATCTTCAACTGGGTGAAATTTCTGCAGTGGTTGTTTCATCTCCTGATATAGCCAAAGAAATAATGAAAACACATGATCTTTCTTTTGTTCATAGGCCAGAACTCCTCTGTCCTAAAATACTATCCTATGAATCAACAGATATTGCATTTGCTCCATATGGTGATTATTGGAGACAGATGAGGAAAATATGTACATCAGAACTTCTTAGTGCTAAAAGGGTTCAATCTTTTTCTTCCATTAGAGAAGATGAGGTAGAAAAGCTTATACAATCTATTCAAGGTTCACTCTCTCTACCACTTGATATTACTAAAATAGCTTTCTCTTTGGTAAGCACCTTAGTTACAAGGGCAGCGTTTGGTAAAATGTCAAAGTATGAAGATGAACTTTTGTTTTTGCTTAAGGAAGCAGTGGAAATGTGTGGTGGTTTTGATGTTGCTGATTTGTTCCCTTCATTTAAACCTATTCATCTAATTACTAGGTTGAAAGCTAAATTGGAGAATATGCAAAAGAAGTTGGATAAGATTTTAGTAAGCATTATCAATGAGCATCAATCAAATTCAAACCATGCCGGCATTCAAGGTGAAAATCTAATTGAAGTTCTTTTGCGTGTTCAGCAAAGTGGAAGTCTTGAGATCCCAATCACAGATAACAATGTCAAAGCCGTCATATGGGATGTGTTTGGTGCTGGGAGTGATACTTCAGCAACAGCAATAGAGTGGGCTATGTCAGAGTTGATGAAAAATCCAAGAGTGAGGAAGAAGGCACAAGCAGCGTTTGGTACAAAATCTAAATATGAAGACGAACTTCTGTGTTTGCTCAAGGAATCAGTGGAAATGGCAAGTGGTTTCGATGTTGCTGATTTGTTCCCTTCATTCAAAACTATTCACCTTATTACTAGGACTAAAGCTAAATTGCAGAGTATGCAAAAGAAGTCGGATAAGATTTTAGAAAGCATTATCAACGAGCATCAAACAAATTCAATCCATGCCGGCATACAAGGTGAAAATCTAGTTGATGTTCTTTTGCGCGTTCAACAAAGTGGCTGTCTCGAGGTCCCAATCACACAAGACAATGTCAAAGCCGTGATATGGGTTAGCTAA
Protein sequence

>Msa0094290

MHLQLGEISAVVVSSPDIAKEIMKTHDLSFVHRPELLCPKILSYESTDIAFAPYGDYWRQMRKICTSELLSAKRVQSFSSIREDEVEKLIQSIQGSLSLPLDITKIAFSLVSTLVTRAAFGKMSKYEDELLFLLKEAVEMCGGFDVADLFPSFKPIHLITRLKAKLENMQKKLDKILVSIINEHQSNSNHAGIQGENLIEVLLRVQQSGSLEIPITDNNVKAVIWDVFGAGSDTSATAIEWAMSELMKNPRVRKKAQAAFGTKSKYEDELLCLLKESVEMASGFDVADLFPSFKTIHLITRTKAKLQSMQKKSDKILESIINEHQTNSIHAGIQGENLVDVLLRVQQSGCLEVPITQDNVKAVIWVS*