AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0095030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095030 MtrunA17_Chr4g0042671 87.229 415 33 4 1 404 1 406 0.0 721
Msa0095030 MtrunA17_Chr4g0042621 85.061 328 28 5 89 404 15 333 0.0 536
Msa0095030 MtrunA17_Chr6g0453471 78.652 178 33 2 1 174 1 177 2.12e-99 300
Msa0095030 MtrunA17_Chr7g0217741 75.676 185 43 2 1 184 1 184 8.29e-98 294
Msa0095030 MtrunA17_Chr8g0349261 64.706 170 56 3 1 166 1 170 2.43e-72 228
Msa0095030 MtrunA17_Chr4g0048511 75.000 132 32 1 1 131 1 132 6.03e-72 229
Msa0095030 MtrunA17_Chr2g0281071 75.385 130 31 1 1 129 1 130 7.27e-71 226
Msa0095030 MtrunA17_Chr3g0115821 72.519 131 36 0 1 131 1 131 1.31e-70 226
Msa0095030 MtrunA17_Chr5g0417821 66.225 151 48 1 10 160 5 152 1.10e-68 219
Msa0095030 MtrunA17_Chr2g0323411 72.519 131 36 0 1 131 1 131 8.78e-68 218
Msa0095030 MtrunA17_Chr5g0410961 63.514 148 54 0 1 148 1 148 6.11e-67 216
Msa0095030 MtrunA17_Chr4g0039971 68.702 131 41 0 1 131 2 132 1.03e-66 216
Msa0095030 MtrunA17_Chr1g0203411 60.588 170 59 3 1 168 1 164 1.18e-65 211
Msa0095030 MtrunA17_Chr5g0395281 64.885 131 46 0 1 131 1 131 7.40e-62 201
Msa0095030 MtrunA17_Chr3g0103281 67.969 128 41 0 1 128 1 128 2.61e-60 198
Msa0095030 MtrunA17_Chr3g0110351 53.631 179 83 0 1 179 1 179 4.90e-60 197
Msa0095030 MtrunA17_Chr5g0434571 64.286 140 50 0 1 140 37 176 8.94e-60 197
Msa0095030 MtrunA17_Chr4g0057031 66.406 128 43 0 1 128 1 128 2.42e-59 194
Msa0095030 MtrunA17_Chr1g0193371 67.176 131 43 0 1 131 1 131 1.60e-58 195
Msa0095030 MtrunA17_Chr1g0193801 64.885 131 46 0 1 131 1 131 1.63e-58 195
Msa0095030 MtrunA17_Chr4g0058631 36.628 344 175 8 1 311 1 334 2.09e-58 194
Msa0095030 MtrunA17_Chr7g0274581 65.254 118 41 0 1 118 1 118 2.17e-58 189
Msa0095030 MtrunA17_Chr4g0037141 58.333 144 60 0 1 144 1 144 2.81e-58 192
Msa0095030 MtrunA17_Chr3g0131121 62.774 137 51 0 1 137 1 137 2.91e-58 192
Msa0095030 MtrunA17_Chr7g0261281 71.552 116 33 0 1 116 1 116 1.09e-57 190
Msa0095030 MtrunA17_Chr7g0270891 64.122 131 47 0 1 131 1 131 1.42e-57 192
Msa0095030 MtrunA17_Chr1g0187761 69.828 116 35 0 1 116 1 116 7.47e-57 187
Msa0095030 MtrunA17_Chr8g0385321 64.062 128 46 0 1 128 1 128 1.01e-56 189
Msa0095030 MtrunA17_Chr1g0167661 72.414 116 32 0 1 116 1 116 1.99e-56 186
Msa0095030 MtrunA17_Chr7g0254411 65.873 126 41 1 1 124 1 126 2.21e-56 188
Msa0095030 MtrunA17_Chr5g0435101 59.854 137 54 1 3 138 2 138 3.55e-56 184
Msa0095030 MtrunA17_Chr1g0167691 70.690 116 34 0 1 116 1 116 4.93e-56 185
Msa0095030 MtrunA17_Chr7g0217221 68.644 118 37 0 1 118 1 118 5.79e-56 185
Msa0095030 MtrunA17_Chr6g0452271 45.902 183 90 1 1 174 1 183 6.59e-56 187
Msa0095030 MtrunA17_Chr7g0228891 64.062 128 46 0 1 128 1 128 1.03e-55 184
Msa0095030 MtrunA17_Chr4g0060721 51.515 165 70 2 1 165 2 156 2.07e-55 186
Msa0095030 MtrunA17_Chr3g0121241 65.323 124 43 0 5 128 35 158 2.31e-55 184
Msa0095030 MtrunA17_Chr3g0117091 66.667 129 41 2 1 128 1 128 5.52e-55 185
Msa0095030 MtrunA17_Chr3g0092401 66.387 119 40 0 1 119 2 120 6.57e-55 184
Msa0095030 MtrunA17_Chr2g0323351 67.797 118 38 0 1 118 1 118 1.12e-54 181
Msa0095030 MtrunA17_Chr7g0271241 66.412 131 44 0 1 131 1 131 1.55e-54 185
Msa0095030 MtrunA17_Chr7g0247131 66.929 127 40 1 44 168 10 136 2.05e-54 181
Msa0095030 MtrunA17_Chr4g0042611 88.636 88 10 0 1 88 1 88 7.64e-54 173
Msa0095030 MtrunA17_Chr1g0211161 64.341 129 45 1 1 128 1 129 8.59e-54 178
Msa0095030 MtrunA17_Chr4g0068061 65.517 116 40 0 1 116 1 116 1.09e-52 179
Msa0095030 MtrunA17_Chr2g0311221 66.364 110 37 0 2 111 4 113 1.56e-52 178
Msa0095030 MtrunA17_Chr8g0346561 65.254 118 41 0 1 118 1 118 2.85e-52 176
Msa0095030 MtrunA17_Chr7g0275911 64.655 116 41 0 1 116 1 116 2.28e-51 172
Msa0095030 MtrunA17_Chr2g0309911 60.833 120 47 0 7 126 6 125 7.52e-51 173
Msa0095030 MtrunA17_Chr6g0453211 67.568 111 36 0 1 111 1 111 8.58e-51 173
Msa0095030 MtrunA17_Chr4g0022931 64.957 117 40 1 1 116 1 117 1.38e-50 171
Msa0095030 MtrunA17_Chr4g0022901 58.824 136 51 2 1 135 1 132 3.71e-50 170
Msa0095030 MtrunA17_Chr1g0194951 59.690 129 52 0 1 129 1 129 6.92e-50 172
Msa0095030 MtrunA17_Chr8g0342521 55.147 136 61 0 1 136 1 136 2.72e-49 170
Msa0095030 MtrunA17_Chr4g0022911 62.931 116 42 1 1 115 1 116 2.79e-49 168
Msa0095030 MtrunA17_Chr4g0070611 65.517 116 40 0 1 116 1 116 3.35e-49 169
Msa0095030 MtrunA17_Chr4g0070641 65.517 116 40 0 1 116 1 116 3.54e-49 164
Msa0095030 MtrunA17_Chr4g0028311 60.769 130 49 2 1 129 1 129 5.73e-49 169
Msa0095030 MtrunA17_Chr2g0330041 55.396 139 59 1 1 136 1 139 7.31e-49 170
Msa0095030 MtrunA17_Chr5g0400821 64.957 117 40 1 1 116 1 117 1.91e-48 167
Msa0095030 MtrunA17_Chr4g0044421 54.861 144 58 2 3 139 2 145 1.93e-48 163
Msa0095030 MtrunA17_Chr8g0342541 57.258 124 53 0 1 124 1 124 3.61e-48 167
Msa0095030 MtrunA17_Chr1g0152011 64.103 117 41 1 1 116 1 117 6.69e-48 166
Msa0095030 MtrunA17_Chr1g0151941 52.083 144 66 2 1 141 1 144 1.39e-47 162
Msa0095030 MtrunA17_Chr4g0032401 56.429 140 50 2 12 140 17 156 1.69e-47 165
Msa0095030 MtrunA17_Chr7g0264641 61.667 120 45 1 1 119 1 120 1.77e-47 163
Msa0095030 MtrunA17_Chr3g0135311 63.248 117 42 1 1 116 1 117 2.08e-47 165
Msa0095030 MtrunA17_Chr8g0387421 58.475 118 49 0 1 118 1 118 2.87e-47 164
Msa0095030 MtrunA17_Chr4g0022881 61.404 114 44 0 1 114 1 114 1.96e-46 159
Msa0095030 MtrunA17_Chr2g0327351 65.766 111 37 1 1 110 1 111 2.23e-46 162
Msa0095030 MtrunA17_Chr1g0203441 62.609 115 42 1 13 127 14 127 1.13e-45 158
Msa0095030 MtrunA17_Chr5g0397231 60.909 110 43 0 1 110 1 110 1.97e-45 159
Msa0095030 MtrunA17_Chr2g0328771 62.963 108 40 0 12 119 20 127 7.65e-45 157
Msa0095030 MtrunA17_Chr7g0269831 60.317 126 50 0 1 126 1 126 1.18e-44 158
Msa0095030 MtrunA17_Chr3g0088461 64.815 108 38 0 9 116 19 126 1.56e-44 157
Msa0095030 MtrunA17_Chr4g0054391 63.303 109 39 1 1 108 1 109 4.49e-44 155
Msa0095030 MtrunA17_Chr4g0022891 58.407 113 47 0 1 113 1 113 9.54e-44 152
Msa0095030 MtrunA17_Chr4g0072751 63.063 111 40 1 1 110 1 111 1.35e-43 155
Msa0095030 MtrunA17_Chr8g0342481 54.400 125 56 1 1 124 1 125 9.12e-43 154
Msa0095030 MtrunA17_Chr6g0470971 53.285 137 60 2 7 143 9 141 2.92e-42 150
Msa0095030 MtrunA17_Chr4g0055981 58.120 117 49 0 9 125 52 168 2.96e-41 145
Msa0095030 MtrunA17_Chr6g0487491 49.068 161 72 3 1 152 1 160 5.53e-41 145
Msa0095030 MtrunA17_Chr3g0080861 58.929 112 45 1 10 121 35 145 1.66e-40 150
Msa0095030 MtrunA17_Chr2g0294811 68.182 88 28 0 1 88 1 88 1.90e-40 139
Msa0095030 MtrunA17_Chr1g0186061 61.165 103 40 0 13 115 21 123 3.21e-40 144
Msa0095030 MtrunA17_Chr1g0168661 62.136 103 39 0 13 115 22 124 4.52e-40 143
Msa0095030 MtrunA17_Chr8g0354661 58.036 112 46 1 10 121 35 145 9.82e-40 149
Msa0095030 MtrunA17_Chr1g0209661 53.333 120 56 0 8 127 23 142 1.43e-39 143
Msa0095030 MtrunA17_Chr1g0194291 54.545 121 55 0 2 122 11 131 1.57e-39 142
Msa0095030 MtrunA17_Chr3g0099131 58.182 110 45 1 12 121 41 149 2.66e-39 147
Msa0095030 MtrunA17_Chr2g0322521 58.407 113 46 1 9 121 26 137 5.30e-39 144
Msa0095030 MtrunA17_Chr5g0434911 54.955 111 50 0 7 117 16 126 5.67e-39 140
Msa0095030 MtrunA17_Chr1g0154031 56.731 104 45 0 12 115 76 179 7.93e-39 144
Msa0095030 MtrunA17_Chr5g0434931 56.075 107 47 0 11 117 34 140 9.67e-39 140
Msa0095030 MtrunA17_Chr1g0194301 52.542 118 56 0 12 129 33 150 1.43e-38 140
Msa0095030 MtrunA17_Chr7g0220341 57.273 110 45 1 10 117 23 132 4.54e-38 138
Msa0095030 MtrunA17_Chr7g0228231 57.944 107 45 0 12 118 14 120 6.02e-38 136
Msa0095030 MtrunA17_Chr7g0240821 51.724 116 56 0 16 131 5 120 3.07e-37 135
Msa0095030 MtrunA17_Chr8g0343831 55.932 118 48 1 1 118 1 114 3.81e-37 135
Msa0095030 MtrunA17_Chr1g0180391 56.190 105 46 0 12 116 19 123 4.77e-37 134
Msa0095030 MtrunA17_Chr2g0327821 51.695 118 54 1 12 126 6 123 6.85e-37 134
Msa0095030 MtrunA17_Chr6g0450101 55.556 108 48 0 12 119 14 121 8.29e-37 133
Msa0095030 MtrunA17_Chr8g0360111 58.824 102 42 0 11 112 24 125 9.36e-37 134
Msa0095030 MtrunA17_Chr5g0434831 56.604 106 46 0 11 116 6 111 1.27e-36 132
Msa0095030 MtrunA17_Chr7g0228991 55.140 107 48 0 11 117 28 134 1.29e-36 134
Msa0095030 MtrunA17_Chr4g0030881 54.545 110 43 1 13 115 8 117 6.69e-36 132
Msa0095030 MtrunA17_Chr5g0434841 55.660 106 47 0 11 116 19 124 1.26e-35 133
Msa0095030 MtrunA17_Chr2g0323321 63.043 92 33 1 1 92 1 91 1.71e-35 126
Msa0095030 MtrunA17_Chr8g0342511 60.920 87 34 0 1 87 1 87 9.69e-35 124
Msa0095030 MtrunA17_Chr5g0395221 64.706 85 30 0 4 88 4 88 2.73e-34 122
Msa0095030 MtrunA17_Chr2g0293911 50.820 122 60 0 8 129 20 141 4.96e-34 129
Msa0095030 MtrunA17_Chr1g0192411 47.934 121 62 1 1 121 1 120 7.52e-34 130
Msa0095030 MtrunA17_Chr4g0068921 51.695 118 57 0 12 129 24 141 1.00e-33 124
Msa0095030 MtrunA17_Chr8g0342531 61.446 83 32 0 7 89 7 89 4.75e-33 122
Msa0095030 MtrunA17_Chr5g0440781 40.141 142 77 3 13 147 13 153 2.91e-32 120
Msa0095030 MtrunA17_Chr5g0440761 40.141 142 77 3 13 147 13 153 8.37e-32 121
Msa0095030 MtrunA17_Chr8g0334881 49.541 109 53 2 12 119 10 117 1.12e-31 122
Msa0095030 MtrunA17_Chr5g0441141 40.141 142 77 3 13 147 13 153 1.14e-31 121
Msa0095030 MtrunA17_Chr8g0342471 56.667 90 38 1 1 89 1 90 5.09e-31 115
Msa0095030 MtrunA17_Chr8g0342461 55.556 90 39 1 1 89 1 90 1.61e-30 114
Msa0095030 MtrunA17_Chr4g0013361 40.789 152 84 4 8 156 6 154 2.16e-30 118
Msa0095030 MtrunA17_Chr3g0099141 54.023 87 40 0 8 94 36 122 5.22e-30 113
Msa0095030 MtrunA17_Chr5g0441131 46.087 115 60 2 10 123 7 120 1.83e-29 112
Msa0095030 MtrunA17_Chr5g0401731 43.939 132 72 2 14 144 15 145 2.89e-29 116
Msa0095030 MtrunA17_Chr3g0093811 58.824 85 35 0 44 128 14 98 7.95e-29 113
Msa0095030 MtrunA17_Chr6g0454921 44.000 125 69 1 14 138 15 138 1.18e-28 111
Msa0095030 MtrunA17_Chr4g0008551 46.018 113 56 2 14 126 38 145 8.15e-28 112
Msa0095030 MtrunA17_Chr3g0133601 50.980 102 49 1 14 115 37 137 2.07e-27 108
Msa0095030 MtrunA17_Chr4g0053431 46.154 104 55 1 14 117 5 107 9.77e-27 107
Msa0095030 MtrunA17_Chr7g0238631 47.619 105 54 1 12 116 111 214 5.71e-26 109
Msa0095030 MtrunA17_Chr5g0429661 44.860 107 58 1 12 118 120 225 1.89e-25 106
Msa0095030 MtrunA17_Chr7g0229131 54.651 86 38 1 44 129 4 88 3.56e-24 98.2
Msa0095030 MtrunA17_Chr7g0229101 36.943 157 89 2 44 200 4 150 5.53e-24 98.6
Msa0095030 MtrunA17_Chr6g0453751 48.936 94 39 2 11 95 19 112 4.43e-23 94.0
Msa0095030 MtrunA17_Chr6g0480581 38.931 131 78 2 14 144 4 132 7.33e-23 96.7
Msa0095030 MtrunA17_Chr5g0434901 63.235 68 25 0 46 113 7 74 1.28e-22 92.4
Msa0095030 MtrunA17_Chr5g0437321 45.455 99 53 1 14 112 19 116 7.89e-22 94.7
Msa0095030 MtrunA17_Chr4g0058991 40.541 111 65 1 8 118 203 312 8.69e-22 97.1
Msa0095030 MtrunA17_Chr4g0042501 40.870 115 62 2 2 116 98 206 1.74e-21 95.9
Msa0095030 MtrunA17_Chr3g0139671 40.000 105 62 1 12 116 83 186 3.42e-21 96.3
Msa0095030 MtrunA17_Chr3g0139671 36.000 100 62 2 14 112 33 131 2.21e-12 68.9
Msa0095030 MtrunA17_Chr6g0460671 43.137 102 57 1 14 115 99 199 3.92e-21 94.0
Msa0095030 MtrunA17_Chr3g0117511 38.739 111 67 1 8 118 177 286 4.90e-21 94.7
Msa0095030 MtrunA17_Chr5g0425591 47.126 87 45 1 10 95 7 93 5.67e-21 87.0
Msa0095030 MtrunA17_Chr6g0460661 41.880 117 64 3 14 129 16 129 7.04e-21 89.0
Msa0095030 MtrunA17_Chr5g0417621 40.517 116 61 3 2 116 127 235 8.89e-21 94.0
Msa0095030 MtrunA17_Chr1g0157731 40.000 105 62 1 12 116 89 192 2.03e-20 94.0
Msa0095030 MtrunA17_Chr1g0157731 34.000 100 64 2 14 112 39 137 9.30e-12 67.0
Msa0095030 MtrunA17_Chr7g0228531 33.103 145 83 3 10 154 216 346 7.78e-20 90.9
Msa0095030 MtrunA17_Chr3g0125801 43.689 103 55 2 14 115 16 116 7.98e-20 89.0
Msa0095030 MtrunA17_Chr7g0254261 40.000 115 63 2 1 115 81 189 1.29e-19 89.4
Msa0095030 MtrunA17_Chr5g0397841 43.299 97 54 1 12 108 108 203 5.69e-19 88.6
Msa0095030 MtrunA17_Chr7g0228401 46.512 86 45 1 25 110 290 374 3.00e-18 86.7
Msa0095030 MtrunA17_Chr7g0238651 38.053 113 66 2 17 125 10 122 5.12e-18 84.7
Msa0095030 MtrunA17_Chr7g0228481 37.624 101 61 2 10 110 216 314 9.34e-17 81.6
Msa0095030 MtrunA17_Chr7g0233061 37.736 106 45 2 14 110 180 273 2.26e-16 80.1
Msa0095030 MtrunA17_Chr5g0395231 59.259 54 22 0 78 131 5 58 4.20e-16 77.4
Msa0095030 MtrunA17_Chr1g0177901 49.206 63 32 0 48 110 27 89 8.49e-16 75.9
Msa0095030 MtrunA17_Chr5g0416341 40.404 99 58 1 17 115 29 126 1.57e-15 78.2
Msa0095030 MtrunA17_Chr1g0193901 45.977 87 45 2 12 96 11 97 3.31e-15 71.2
Msa0095030 MtrunA17_Chr1g0193891 45.977 87 45 2 12 96 11 97 3.31e-15 71.2
Msa0095030 MtrunA17_Chr1g0193871 45.977 87 45 2 12 96 11 97 3.31e-15 71.2
Msa0095030 MtrunA17_Chr1g0193881 45.977 87 45 2 12 96 11 97 3.31e-15 71.2
Msa0095030 MtrunA17_Chr7g0247141 59.574 47 18 1 1 46 1 47 1.66e-13 65.1
Msa0095030 MtrunA17_Chr8g0362231 38.384 99 60 1 17 115 25 122 1.72e-13 71.6
Msa0095030 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 5.96e-12 60.8
Msa0095030 MtrunA17_Chr3g0145551 58.696 46 19 0 92 137 2 47 8.99e-12 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095030 AT3G01140.2 44.169 403 153 10 1 397 1 337 6.35e-96 291
Msa0095030 AT5G15310.4 73.913 184 46 1 1 182 1 184 6.72e-95 285
Msa0095030 AT5G15310.2 73.913 184 46 1 1 182 1 184 2.79e-94 286
Msa0095030 AT5G15310.1 73.913 184 46 1 1 182 1 184 4.07e-94 285
Msa0095030 AT3G01140.1 43.750 400 153 10 4 397 47 380 1.63e-92 283
Msa0095030 AT3G61250.1 67.273 165 54 0 1 165 1 165 1.08e-78 245
Msa0095030 AT4G21440.1 74.046 131 34 0 1 131 1 131 3.25e-72 230
Msa0095030 AT3G02940.2 74.046 131 34 0 1 131 1 131 1.77e-71 227
Msa0095030 AT3G02940.1 74.046 131 34 0 1 131 1 131 5.17e-71 226
Msa0095030 AT3G02940.3 74.046 131 34 0 1 131 1 131 5.17e-71 226
Msa0095030 AT4G05100.1 76.154 130 30 1 1 129 1 130 5.84e-71 226
Msa0095030 AT5G16770.4 73.282 131 35 0 1 131 1 131 1.23e-69 223
Msa0095030 AT5G16770.3 73.282 131 35 0 1 131 1 131 1.23e-69 223
Msa0095030 AT5G16770.1 73.282 131 35 0 1 131 1 131 3.84e-69 222
Msa0095030 AT5G16770.2 73.282 131 35 0 1 131 1 131 3.84e-69 222
Msa0095030 AT1G34670.1 73.282 131 35 0 1 131 1 131 5.98e-69 222
Msa0095030 AT4G28110.1 72.868 129 35 0 1 129 1 129 1.21e-68 219
Msa0095030 AT5G10280.1 67.883 137 44 0 1 137 1 137 1.14e-67 218
Msa0095030 AT5G65230.1 70.229 131 39 0 1 131 1 131 1.88e-65 211
Msa0095030 AT5G54230.1 65.772 149 51 0 1 149 1 149 3.09e-64 208
Msa0095030 AT4G17785.2 70.455 132 38 1 1 131 1 132 3.98e-64 209
Msa0095030 AT4G17785.1 70.455 132 38 1 1 131 1 132 5.22e-64 209
Msa0095030 AT5G61420.2 70.312 128 38 0 1 128 1 128 1.79e-62 205
Msa0095030 AT5G07700.1 68.750 128 40 0 1 128 1 128 7.64e-62 203
Msa0095030 AT5G07700.2 68.750 128 40 0 1 128 1 128 7.64e-62 203
Msa0095030 AT1G74080.1 65.693 137 47 0 1 137 1 137 1.02e-61 202
Msa0095030 AT5G60890.1 68.750 128 40 0 1 128 1 128 1.16e-61 201
Msa0095030 AT2G31180.1 61.006 159 46 2 1 148 1 154 1.33e-61 199
Msa0095030 AT5G07690.1 69.531 128 39 0 1 128 1 128 1.77e-61 202
Msa0095030 AT1G18570.1 63.087 149 51 2 1 145 1 149 2.04e-61 202
Msa0095030 AT4G34990.1 63.830 141 51 0 1 141 1 141 3.15e-61 199
Msa0095030 AT5G16600.1 71.094 128 37 0 1 128 1 128 6.21e-61 200
Msa0095030 AT4G12350.1 61.184 152 50 1 1 143 1 152 1.81e-60 197
Msa0095030 AT4G22680.1 67.969 128 41 0 1 128 1 128 4.11e-60 196
Msa0095030 AT5G56110.1 67.188 128 42 0 1 128 1 128 5.81e-60 197
Msa0095030 AT4G38620.1 44.954 218 108 2 1 209 1 215 1.09e-59 196
Msa0095030 AT4G01680.3 64.029 139 50 0 1 139 1 139 2.78e-59 193
Msa0095030 AT1G66230.1 68.750 128 40 0 1 128 1 128 3.01e-59 194
Msa0095030 AT3G23250.1 67.692 130 38 1 1 130 1 126 3.78e-59 194
Msa0095030 AT1G35515.1 63.235 136 50 0 1 136 1 136 1.07e-58 191
Msa0095030 AT4G01680.1 64.029 139 50 0 1 139 1 139 1.75e-58 194
Msa0095030 AT4G09460.1 62.774 137 51 0 1 137 1 137 3.99e-58 190
Msa0095030 AT2G16720.1 49.468 188 88 3 1 181 1 188 8.14e-58 190
Msa0095030 AT5G26660.1 67.188 128 42 0 1 128 1 128 1.70e-57 192
Msa0095030 AT1G22640.1 64.567 127 45 0 1 127 1 127 1.79e-57 189
Msa0095030 AT1G06180.1 74.138 116 30 0 1 116 1 116 2.00e-57 188
Msa0095030 AT5G62470.2 53.939 165 74 2 1 165 1 163 2.41e-57 192
Msa0095030 AT1G74430.1 64.615 130 46 0 1 130 1 130 2.77e-57 189
Msa0095030 AT3G47600.1 67.227 119 39 0 1 119 1 119 1.50e-56 189
Msa0095030 AT1G08810.1 60.839 143 55 1 1 143 1 142 1.94e-56 187
Msa0095030 AT1G18710.1 60.870 138 54 0 1 138 1 138 4.94e-56 186
Msa0095030 AT3G13540.1 63.200 125 46 0 4 128 15 139 7.28e-56 184
Msa0095030 AT1G79180.1 68.376 117 37 0 2 118 4 120 1.19e-55 185
Msa0095030 AT5G62470.1 53.939 165 73 3 1 165 1 162 1.71e-55 187
Msa0095030 AT1G57560.2 57.143 147 63 0 1 147 1 147 2.04e-55 184
Msa0095030 AT4G01680.2 58.940 151 50 1 1 139 1 151 5.34e-55 185
Msa0095030 AT1G57560.1 62.500 128 48 0 1 128 1 128 6.57e-55 184
Msa0095030 AT1G74650.1 67.227 119 39 0 1 119 1 119 1.38e-54 184
Msa0095030 AT1G09540.1 61.832 131 50 0 1 131 1 131 1.46e-54 185
Msa0095030 AT5G62320.1 60.902 133 45 1 2 127 3 135 2.83e-54 180
Msa0095030 AT5G14340.1 58.647 133 55 0 1 133 13 145 6.58e-54 180
Msa0095030 AT3G28910.1 64.754 122 43 0 1 122 1 122 2.90e-53 180
Msa0095030 AT1G16490.1 65.517 116 40 0 2 117 4 119 1.19e-52 177
Msa0095030 AT3G28470.1 63.281 128 47 0 1 128 1 128 2.38e-51 175
Msa0095030 AT1G56160.1 65.517 116 40 0 2 117 4 119 7.39e-51 173
Msa0095030 AT5G49330.1 63.793 116 42 0 1 116 1 116 2.39e-50 173
Msa0095030 AT3G62610.1 60.800 125 49 0 1 125 1 125 5.82e-50 172
Msa0095030 AT2G47460.1 62.931 116 43 0 1 116 1 116 4.20e-49 171
Msa0095030 AT1G79180.2 53.333 150 37 1 2 118 4 153 7.76e-49 169
Msa0095030 AT1G63910.1 52.817 142 67 0 1 142 1 142 8.92e-49 170
Msa0095030 AT3G49690.1 65.812 117 39 1 1 116 1 117 1.20e-48 167
Msa0095030 AT3G13890.2 61.207 116 45 0 1 116 1 116 1.23e-48 169
Msa0095030 AT3G12720.1 57.500 120 51 0 7 126 17 136 2.30e-48 167
Msa0095030 AT5G57620.1 64.103 117 41 1 1 116 1 117 4.43e-48 167
Msa0095030 AT5G23000.1 62.393 117 43 1 1 116 1 117 2.07e-47 165
Msa0095030 AT5G65790.1 64.957 117 40 1 1 116 1 117 2.47e-47 166
Msa0095030 AT3G12820.1 60.345 116 46 0 3 118 5 120 6.28e-46 158
Msa0095030 AT3G13890.1 56.800 125 45 1 1 116 1 125 1.19e-45 161
Msa0095030 AT2G36890.1 58.268 127 52 1 1 126 1 127 1.46e-45 159
Msa0095030 AT2G36890.2 58.268 127 52 1 1 126 42 168 2.98e-45 159
Msa0095030 AT4G37780.1 58.974 117 47 1 1 116 1 117 1.17e-44 157
Msa0095030 AT5G12870.1 63.889 108 39 0 12 119 18 125 1.50e-44 156
Msa0095030 AT5G14750.1 61.538 104 40 0 13 116 17 120 1.23e-42 149
Msa0095030 AT4G26930.1 60.714 112 43 1 10 121 17 127 1.24e-42 154
Msa0095030 AT5G55020.1 63.393 112 40 1 10 121 24 134 1.49e-42 156
Msa0095030 AT2G26960.1 41.919 198 102 5 9 198 17 209 1.89e-42 154
Msa0095030 AT3G08500.1 63.810 105 38 0 12 116 30 134 9.26e-42 150
Msa0095030 AT5G40330.1 60.577 104 41 0 13 116 13 116 1.79e-41 146
Msa0095030 AT5G52600.1 61.682 107 41 0 9 115 9 115 6.55e-41 144
Msa0095030 AT2G32460.1 56.667 120 51 1 8 127 14 132 1.62e-40 150
Msa0095030 AT5G35550.1 62.857 105 39 0 12 116 14 118 2.10e-40 144
Msa0095030 AT2G32460.2 57.265 117 49 1 11 127 5 120 2.26e-40 150
Msa0095030 AT4G25560.1 56.522 115 48 1 1 115 1 113 4.07e-40 144
Msa0095030 AT1G48000.1 54.167 120 55 0 10 129 30 149 6.44e-40 142
Msa0095030 AT5G26660.2 76.190 84 20 0 45 128 14 97 9.63e-40 144
Msa0095030 AT5G06100.1 57.658 111 46 1 11 121 31 140 1.03e-39 147
Msa0095030 AT3G27920.1 59.048 105 43 0 13 117 15 119 1.12e-39 141
Msa0095030 AT3G24310.1 60.952 105 41 0 11 115 17 121 1.30e-39 142
Msa0095030 AT3G48920.1 53.226 124 57 1 13 136 19 141 1.78e-39 142
Msa0095030 AT1G25340.1 55.652 115 51 0 13 127 19 133 2.50e-39 142
Msa0095030 AT5G06100.5 57.658 111 46 1 11 121 31 140 3.05e-39 147
Msa0095030 AT5G06100.2 57.658 111 46 1 11 121 31 140 3.05e-39 147
Msa0095030 AT5G06100.3 57.658 111 46 1 11 121 31 140 3.05e-39 147
Msa0095030 AT5G06100.4 57.658 111 46 1 11 121 31 140 3.05e-39 147
Msa0095030 AT5G40350.1 52.273 132 54 2 12 143 17 139 4.84e-39 139
Msa0095030 AT4G13480.1 61.165 103 40 0 13 115 7 109 5.07e-39 141
Msa0095030 AT5G52260.1 64.078 103 37 0 13 115 13 115 5.24e-39 141
Msa0095030 AT3G11440.2 56.364 110 47 1 12 121 41 149 5.53e-39 145
Msa0095030 AT3G30210.1 59.615 104 42 0 11 114 26 129 1.61e-38 140
Msa0095030 AT3G11440.3 56.364 110 47 1 12 121 41 149 1.99e-38 145
Msa0095030 AT3G11440.4 56.364 110 47 1 12 121 41 149 1.99e-38 145
Msa0095030 AT3G11440.1 56.364 110 47 1 12 121 41 149 1.99e-38 145
Msa0095030 AT1G66370.1 55.652 115 47 1 1 115 1 111 5.14e-38 137
Msa0095030 AT3G01530.1 56.881 109 47 0 8 116 21 129 5.62e-38 136
Msa0095030 AT3G27810.1 53.509 114 53 0 12 125 20 133 1.03e-37 136
Msa0095030 AT3G46130.1 57.143 105 45 0 11 115 8 112 6.01e-37 135
Msa0095030 AT2G47190.1 52.174 115 55 0 8 122 16 130 6.45e-37 135
Msa0095030 AT3G53200.1 56.364 110 48 0 6 115 3 112 9.65e-37 134
Msa0095030 AT5G59780.3 56.731 104 45 0 12 115 8 111 1.10e-36 134
Msa0095030 AT1G68320.1 52.586 116 55 0 12 127 19 134 1.03e-35 133
Msa0095030 AT3G06490.1 53.279 122 57 0 8 129 15 136 3.08e-35 132
Msa0095030 AT1G25340.2 53.043 115 49 1 13 127 19 128 1.43e-34 129
Msa0095030 AT1G25340.3 53.043 115 49 1 13 127 19 128 2.71e-34 129
Msa0095030 AT1G66380.1 59.048 105 43 0 11 115 7 111 4.44e-34 124
Msa0095030 AT5G49620.1 50.820 122 60 0 8 129 22 143 2.57e-33 127
Msa0095030 AT1G56650.1 58.095 105 44 0 11 115 7 111 4.26e-33 125
Msa0095030 AT1G66390.1 57.143 105 45 0 11 115 7 111 7.23e-33 124
Msa0095030 AT3G60460.1 51.754 114 53 2 7 119 6 118 9.08e-33 125
Msa0095030 AT3G47600.2 47.887 142 69 3 45 184 39 177 3.49e-32 124
Msa0095030 AT5G15310.3 60.396 101 38 1 84 182 5 105 6.20e-31 119
Msa0095030 AT5G35550.2 69.231 78 24 0 39 116 44 121 3.00e-30 117
Msa0095030 AT5G14750.3 65.385 78 24 1 39 116 12 86 6.87e-30 114
Msa0095030 AT5G49620.2 45.588 136 60 1 8 129 22 157 8.93e-30 117
Msa0095030 AT3G12820.2 69.014 71 22 0 48 118 2 72 4.65e-29 112
Msa0095030 AT2G26950.1 44.248 113 62 1 9 121 13 124 3.22e-28 114
Msa0095030 AT3G46130.3 66.667 72 24 0 44 115 9 80 1.00e-27 109
Msa0095030 AT3G53200.2 63.636 77 28 0 39 115 3 79 1.21e-27 108
Msa0095030 AT5G40350.2 53.535 99 37 2 45 143 5 94 1.56e-27 107
Msa0095030 AT5G59780.2 66.197 71 24 0 45 115 20 90 2.73e-27 108
Msa0095030 AT1G71030.1 55.556 90 39 1 38 127 7 95 3.11e-27 107
Msa0095030 AT3G46130.4 66.197 71 24 0 45 115 20 90 4.99e-27 108
Msa0095030 AT3G27810.2 55.556 81 36 0 45 125 4 84 1.81e-26 105
Msa0095030 AT1G22640.3 63.768 69 25 0 59 127 2 70 1.95e-26 105
Msa0095030 AT5G67300.1 49.020 102 51 1 14 115 6 106 1.99e-26 108
Msa0095030 AT1G71030.2 58.442 77 32 0 51 127 5 81 2.29e-26 104
Msa0095030 AT1G18960.1 45.299 117 57 3 14 128 10 121 1.31e-25 105
Msa0095030 AT4G37260.1 47.664 107 55 1 14 120 13 118 1.57e-25 106
Msa0095030 AT2G23290.1 48.077 104 53 1 14 117 13 115 2.83e-25 105
Msa0095030 AT5G02320.1 45.714 105 56 1 12 116 125 228 3.14e-25 108
Msa0095030 AT5G02320.2 45.714 105 56 1 12 116 125 228 3.14e-25 108
Msa0095030 AT3G50060.1 45.536 112 59 2 14 125 6 115 3.55e-25 104
Msa0095030 AT5G02320.3 45.714 105 56 1 12 116 65 168 3.56e-25 107
Msa0095030 AT2G39880.1 49.020 102 51 1 14 115 50 150 1.39e-24 104
Msa0095030 AT3G09230.1 47.573 103 53 1 14 116 55 156 1.47e-24 104
Msa0095030 AT4G18770.1 36.747 166 88 4 8 169 211 363 1.97e-24 104
Msa0095030 AT3G09370.2 45.192 104 56 1 12 115 133 235 2.19e-24 105
Msa0095030 AT3G09370.2 35.000 100 63 2 14 112 83 181 1.40e-11 66.6
Msa0095030 AT3G09370.1 45.192 104 56 1 12 115 128 230 2.48e-24 105
Msa0095030 AT3G09370.1 35.000 100 63 2 14 112 78 176 1.61e-11 66.2
Msa0095030 AT3G09370.3 45.192 104 56 1 12 115 141 243 3.39e-24 104
Msa0095030 AT3G09370.3 35.000 100 63 2 14 112 91 189 1.65e-11 66.2
Msa0095030 AT3G23250.2 66.667 72 20 1 59 130 2 69 6.11e-24 99.8
Msa0095030 AT1G17950.1 47.573 103 51 2 14 115 5 105 9.84e-24 99.4
Msa0095030 AT5G40360.1 40.517 116 67 2 1 116 145 258 5.39e-23 99.8
Msa0095030 AT3G55730.1 44.340 106 58 1 14 119 56 160 5.61e-23 100
Msa0095030 AT5G58850.1 46.939 98 49 2 12 108 103 198 5.76e-23 100
Msa0095030 AT1G66380.3 66.197 71 24 0 45 115 8 78 7.63e-23 92.8
Msa0095030 AT1G69560.1 43.119 109 59 2 9 116 102 208 7.71e-23 98.6
Msa0095030 AT1G69560.2 43.119 109 59 2 9 116 118 224 1.00e-22 98.6
Msa0095030 AT3G27785.1 41.441 111 64 1 8 118 183 292 1.75e-22 99.4
Msa0095030 AT5G11510.3 43.119 109 53 2 12 116 79 182 6.17e-22 99.0
Msa0095030 AT5G11510.1 43.119 109 53 2 12 116 79 182 6.17e-22 99.0
Msa0095030 AT5G11510.4 43.119 109 53 2 12 116 79 182 6.17e-22 99.0
Msa0095030 AT5G11050.1 44.898 98 51 2 14 110 105 200 6.89e-22 97.4
Msa0095030 AT5G11510.5 43.119 109 53 2 12 116 79 182 7.73e-22 98.6
Msa0095030 AT5G11510.2 43.119 109 53 2 12 116 79 182 8.10e-22 98.2
Msa0095030 AT1G26780.1 44.762 105 55 2 12 115 96 198 8.80e-22 94.7
Msa0095030 AT1G26780.2 44.340 106 56 2 12 116 96 199 1.00e-21 95.9
Msa0095030 AT4G32730.1 41.905 105 60 1 12 116 85 188 1.48e-21 97.4
Msa0095030 AT4G32730.1 36.000 100 62 2 14 112 35 133 1.21e-12 70.1
Msa0095030 AT4G32730.5 41.905 105 60 1 12 116 85 188 1.49e-21 97.8
Msa0095030 AT4G32730.5 36.000 100 62 2 14 112 35 133 1.18e-12 70.5
Msa0095030 AT4G32730.4 41.905 105 60 1 12 116 85 188 1.49e-21 97.8
Msa0095030 AT4G32730.4 36.000 100 62 2 14 112 35 133 1.18e-12 70.5
Msa0095030 AT4G32730.3 41.905 105 60 1 12 116 85 188 1.49e-21 97.8
Msa0095030 AT4G32730.3 36.000 100 62 2 14 112 35 133 1.18e-12 70.5
Msa0095030 AT4G32730.2 41.905 105 60 1 12 116 85 188 1.49e-21 97.8
Msa0095030 AT4G32730.2 36.000 100 62 2 14 112 35 133 1.18e-12 70.5
Msa0095030 AT4G33450.1 39.815 108 64 1 8 115 13 119 3.25e-21 92.4
Msa0095030 AT1G66380.2 56.250 80 35 0 11 90 7 86 4.64e-21 88.2
Msa0095030 AT1G73410.1 45.098 102 55 1 14 115 6 106 7.70e-21 91.3
Msa0095030 AT5G14750.4 65.517 58 20 0 59 116 2 59 7.82e-21 88.6
Msa0095030 AT5G14750.2 65.517 58 20 0 59 116 2 59 7.82e-21 88.6
Msa0095030 AT1G73410.2 43.697 119 60 3 14 132 6 117 9.58e-21 90.1
Msa0095030 AT5G17800.1 41.228 114 65 2 2 115 82 193 4.53e-20 90.9
Msa0095030 AT2G25230.1 40.171 117 69 1 4 120 16 131 1.12e-19 87.8
Msa0095030 AT5G61420.1 77.083 48 11 0 81 128 2 49 1.75e-18 85.5
Msa0095030 AT5G39700.1 41.346 104 59 2 15 118 57 158 8.59e-18 81.3
Msa0095030 AT3G29020.1 34.400 125 73 3 14 131 65 187 1.04e-17 82.0
Msa0095030 AT3G29020.2 33.871 124 75 2 14 131 67 189 2.37e-17 82.4
Msa0095030 AT2G02820.3 41.414 99 57 1 17 115 33 130 1.02e-16 81.3
Msa0095030 AT2G02820.1 41.414 99 57 1 17 115 33 130 1.13e-16 82.0
Msa0095030 AT2G02820.2 41.414 99 57 1 17 115 33 130 1.28e-16 82.0
Msa0095030 AT2G37630.1 38.000 100 60 1 17 114 7 106 1.70e-16 80.9
Msa0095030 AT4G00540.2 39.815 108 61 2 12 116 101 207 5.27e-16 79.7
Msa0095030 AT4G00540.1 38.739 111 64 2 12 119 99 208 7.48e-16 79.3
Msa0095030 AT4G28110.2 71.429 42 12 0 88 129 4 45 2.70e-15 74.3
Msa0095030 AT5G40430.1 33.333 117 76 2 4 120 44 158 2.88e-15 75.5
Msa0095030 AT1G14350.2 39.394 99 59 1 17 115 28 125 4.27e-15 77.0
Msa0095030 AT1G14350.1 39.394 99 59 1 17 115 28 125 4.27e-15 77.0
Msa0095030 AT1G74650.3 71.429 42 12 0 78 119 2 43 7.99e-14 71.2
Msa0095030 AT3G28910.2 64.444 45 16 0 78 122 2 46 1.73e-13 70.5
Msa0095030 AT5G59780.1 65.116 43 15 0 73 115 4 46 3.48e-13 67.8
Msa0095030 AT3G46130.2 65.116 43 15 0 73 115 4 46 6.16e-13 67.4
Msa0095030 AT4G25560.2 64.444 45 16 0 71 115 3 47 8.86e-13 67.8
Msa0095030 AT1G74430.2 53.704 54 25 0 77 130 8 61 1.97e-12 66.2
Msa0095030 AT1G22640.2 65.000 40 14 0 88 127 16 55 8.66e-12 63.9
Msa0095030 AT5G14340.2 50.000 54 26 1 81 133 2 55 1.09e-11 63.9
Msa0095030 AT3G18100.1 34.000 100 57 2 13 108 545 639 2.16e-11 66.2
Msa0095030 AT3G18100.4 34.000 100 57 2 13 108 384 478 2.48e-11 65.9
Msa0095030 AT3G18100.3 34.000 100 57 2 13 108 497 591 2.52e-11 66.2
Msa0095030 AT3G18100.2 34.000 100 57 2 13 108 332 426 2.99e-11 65.9

Find 88 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCATCATTGGTGTTAT+TGG 0.154714 1_2:-78608332 None:intergenic
ATCTCATTGTCTGTTCTTCT+TGG 0.155064 1_2:-78607749 None:intergenic
TCTATCATTGAACAATTTAT+TGG 0.211916 1_2:+78604757 None:intergenic
ATTCAACTTCATGCCCTTCT+TGG 0.237204 1_2:+78605215 Msa0095030:CDS
ATAGCTTATATTGAAGAATT+TGG 0.246166 1_2:+78604952 Msa0095030:CDS
ACTATAGGGAGTACTTAATT+AGG 0.252519 1_2:+78608727 Msa0095030:three_prime_UTR
TCATTGGTGTTATTGGTTAA+AGG 0.282090 1_2:-78608325 None:intergenic
AAACCAACACGTGAATGTTT+TGG 0.284406 1_2:-78604829 None:intergenic
CGTGTATTGCCTTCCAAATC+TGG 0.287344 1_2:+78604988 Msa0095030:CDS
TCGAGGAGAATAAGCATTAT+TGG 0.289886 1_2:+78608599 Msa0095030:CDS
AAGAGGAAAGTTTAGTTTGC+AGG 0.291765 1_2:+78605178 Msa0095030:CDS
GCTAAGGTTTATTGAGTCTT+TGG 0.292150 1_2:-78607873 None:intergenic
AAGAATTTGGTCATGGAAAC+TGG 0.296931 1_2:+78604965 Msa0095030:CDS
TCAGCAAGATGATGATATTA+TGG 0.317696 1_2:+78608438 Msa0095030:CDS
GATAAAATACCAACCAGATT+TGG 0.322185 1_2:-78605001 None:intergenic
GGGTGGTGATCAGGAAAATT+TGG 0.325554 1_2:+78608549 Msa0095030:CDS
GTTATTGTTTGAGTCCTCTT+TGG 0.331275 1_2:-78608125 None:intergenic
TGAAGAACATTTGTTGAAAC+AGG 0.336938 1_2:-78608517 None:intergenic
TATAGTAGCTGTTTGACTAT+AGG 0.357467 1_2:+78608712 Msa0095030:three_prime_UTR
ATAGTAGCTGTTTGACTATA+GGG 0.362893 1_2:+78608713 Msa0095030:three_prime_UTR
CATTATTGGAATAGCATACT+TGG 0.366602 1_2:+78608613 Msa0095030:CDS
ATGAACTTTGCCATGCTTTG+AGG 0.375041 1_2:-78608078 None:intergenic
TGGAGATTCAATATCATCAT+TGG 0.381293 1_2:-78608185 None:intergenic
CCAATGATGATGATGAGATA+TGG 0.393529 1_2:+78608341 Msa0095030:CDS
TTCATGCCCTTCTTGGAAAC+AGG 0.394656 1_2:+78605222 Msa0095030:CDS
ACAATGAGATCAAGAACTAT+TGG 0.395892 1_2:+78607762 Msa0095030:CDS
AAGAAAAGACTAACAAGAAT+GGG 0.399087 1_2:+78607797 Msa0095030:CDS
TTGGTGCTACTACCAGTTGT+GGG 0.400406 1_2:-78607854 None:intergenic
TCTTCCAGTTTCTGCTCCTA+TGG 0.401490 1_2:+78608264 Msa0095030:CDS
CCCATTGAGCCATGTGGCTA+AGG 0.403768 1_2:-78607889 None:intergenic
TCTTGGAAGTTGAGCTGCTA+TGG 0.403900 1_2:-78607732 None:intergenic
AGTTCTTGAGGGTGGTGATC+AGG 0.406530 1_2:+78608540 Msa0095030:CDS
AAAGGAAGCAATGTTGTTCC+AGG 0.407247 1_2:-78608226 None:intergenic
CCTTAGCCACATGGCTCAAT+GGG 0.408477 1_2:+78607889 Msa0095030:CDS
CCATATCTCATCATCATCAT+TGG 0.411752 1_2:-78608341 None:intergenic
TCAAAGCATGGCAAAGTTCA+TGG 0.422135 1_2:+78608080 Msa0095030:CDS
TTTGCCATAGGAGCAGAAAC+TGG 0.426377 1_2:-78608268 None:intergenic
TCTTGCAGGTGGCTGTGGTT+TGG 0.436301 1_2:-78607996 None:intergenic
ACATCCACTTTGAACTTCCC+TGG 0.436918 1_2:+78608208 Msa0095030:CDS
TGGTCTTCCTCAGGAGTCCA+TGG 0.445498 1_2:-78604922 None:intergenic
ACCTTAGCCACATGGCTCAA+TGG 0.446584 1_2:+78607888 Msa0095030:CDS
TGCAGGTGGCTGTGGTTTGG+AGG 0.449544 1_2:-78607993 None:intergenic
TCAATGGGAGAGTGCTCGTT+TGG 0.451606 1_2:+78607904 Msa0095030:CDS
TAAGAAAAGACTAACAAGAA+TGG 0.460689 1_2:+78607796 Msa0095030:CDS
AGAGGAACAGAAAGAGGTAA+AGG 0.463876 1_2:-78608244 None:intergenic
ATAATGAAGCTATAGATCAT+AGG 0.468681 1_2:+78608675 Msa0095030:exon
AATGTTCTTCAAGTTCTTGA+GGG 0.469624 1_2:+78608529 Msa0095030:CDS
TCACCTTTCTGTGAGAAAGT+TGG 0.471226 1_2:+78604886 Msa0095030:CDS
AAAAGTCTTGCAGGTGGCTG+TGG 0.471467 1_2:-78608001 None:intergenic
TATTTACCTGTTTCCAAGAA+GGG 0.477583 1_2:-78605228 None:intergenic
CTCCCAAAACATTCACGTGT+TGG 0.477591 1_2:+78604826 Msa0095030:five_prime_UTR
GGAAGTAAACTTTGATTGAG+TGG 0.486242 1_2:-78608304 None:intergenic
AATCCAACTTTCTCACAGAA+AGG 0.486486 1_2:-78604889 None:intergenic
TTTGGTGCTACTACCAGTTG+TGG 0.499502 1_2:-78607855 None:intergenic
ACTAAGCATAACACAGAAGC+TGG 0.503690 1_2:+78608379 Msa0095030:CDS
AAATGTTCTTCAAGTTCTTG+AGG 0.511287 1_2:+78608528 Msa0095030:CDS
GAGAAAGTTGGATTGAAGAA+AGG 0.514106 1_2:+78604898 Msa0095030:CDS
TATATTGAAGAATTTGGTCA+TGG 0.517029 1_2:+78604958 Msa0095030:CDS
GAAAGAGCTGCAGACTAAGA+TGG 0.517757 1_2:+78605129 Msa0095030:CDS
ACTGGAAGAGGAACAGAAAG+AGG 0.527531 1_2:-78608250 None:intergenic
TGATGATATTATGGCGGCTG+TGG 0.535815 1_2:+78608447 Msa0095030:CDS
TCAATATTATTGTTTGCCAT+AGG 0.538126 1_2:-78608280 None:intergenic
ATAAAAGGGCTTCAAAGATG+TGG 0.553160 1_2:+78605107 Msa0095030:intron
AGTTGATAATAATGCAATGT+CGG 0.557474 1_2:+78608761 Msa0095030:three_prime_UTR
GGGAAGTTCAAAGTGGATGT+TGG 0.558335 1_2:-78608205 None:intergenic
TCAAGACAAGGTGGAAGTGA+AGG 0.564353 1_2:-78608052 None:intergenic
CTCAATAAACCTTAGCCACA+TGG 0.568772 1_2:+78607880 Msa0095030:CDS
GTATTTACCTGTTTCCAAGA+AGG 0.577278 1_2:-78605229 None:intergenic
GTTCTTCAAGTTCTTGAGGG+TGG 0.594370 1_2:+78608532 Msa0095030:CDS
GGTGATCAGGAAAATTTGGA+TGG 0.594953 1_2:+78608553 Msa0095030:CDS
AGAACATTTGTTGAAACAGG+AGG 0.603056 1_2:-78608514 None:intergenic
TGGTGCTACTACCAGTTGTG+GGG 0.604408 1_2:-78607853 None:intergenic
ATAGGAGCAGAAACTGGAAG+AGG 0.612177 1_2:-78608262 None:intergenic
AAATACCAACCAGATTTGGA+AGG 0.621794 1_2:-78604997 None:intergenic
GTCTTGATATCCTCAAAGCA+TGG 0.625732 1_2:+78608068 Msa0095030:CDS
GTGGAAGCATTTAGAGCAAG+CGG 0.626593 1_2:+78608466 Msa0095030:CDS
CACTCTCCCATTGAGCCATG+TGG 0.631905 1_2:-78607895 None:intergenic
TTGGATTGAAGAAAGGACCA+TGG 0.646456 1_2:+78604905 Msa0095030:CDS
GAAGCATTTAGAGCAAGCGG+TGG 0.653606 1_2:+78608469 Msa0095030:CDS
GGAAGTGAAGGTTGAATCAG+TGG 0.655194 1_2:-78608040 None:intergenic
AAGGAAGCAATGTTGTTCCA+GGG 0.660492 1_2:-78608225 None:intergenic
AGAAAAGACTAACAAGAATG+GGG 0.662196 1_2:+78607798 Msa0095030:CDS
GAAAGGACCATGGACTCCTG+AGG 0.668803 1_2:+78604915 Msa0095030:CDS
TGTTCCAGGGAAGTTCAAAG+TGG 0.675761 1_2:-78608212 None:intergenic
GCAAGATGATGATATTATGG+CGG 0.691629 1_2:+78608441 Msa0095030:CDS
TTGAGGATATCAAGACAAGG+TGG 0.701426 1_2:-78608061 None:intergenic
GCTTTGAGGATATCAAGACA+AGG 0.746052 1_2:-78608064 None:intergenic
GATGTGTAACGTGAATCTCG+AGG 0.750691 1_2:+78608582 Msa0095030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAAAAAATTATAAAT+GGG - chr1_2:78605408-78605427 None:intergenic 0.0%
!! TATTATTAAAAAATTATAAA+TGG - chr1_2:78605409-78605428 None:intergenic 0.0%
!!! AAATTTTTTTTGTTTGAAAA+TGG + chr1_2:78605841-78605860 Msa0095030:intron 10.0%
!!! TTTTTTATTTTTTAATTACG+TGG - chr1_2:78605962-78605981 None:intergenic 10.0%
!!! TATAATTTTCAGATTTTTTT+CGG - chr1_2:78606126-78606145 None:intergenic 10.0%
!!! AATTTATTTTCAGATTTTTT+CGG - chr1_2:78606012-78606031 None:intergenic 10.0%
!!! AAATTTATTTTCAGATTTTT+CGG + chr1_2:78606469-78606488 Msa0095030:intron 10.0%
!!! AAATTTATTTTCAGATTTTT+CGG + chr1_2:78606469-78606488 Msa0095030:intron 10.0%
!!! TCAAATAAAAAATTTTTTAC+AGG + chr1_2:78606772-78606791 Msa0095030:intron 10.0%
!!! CAAATAAAAAATTTTTTACA+GGG + chr1_2:78606773-78606792 Msa0095030:intron 10.0%
!!! ACTTAAATAATTTAGTTTTT+TGG - chr1_2:78606977-78606996 None:intergenic 10.0%
!! TGAAAAATAAATAATTAATG+TGG + chr1_2:78607213-78607232 Msa0095030:intron 10.0%
!!! TTTTTAATATTAAAAGAGTG+CGG + chr1_2:78605532-78605551 Msa0095030:intron 15.0%
!!! AGTATATTAAGCTTTTATAT+AGG + chr1_2:78605734-78605753 Msa0095030:intron 15.0%
!! TCAAACAAAAAAAATTTACA+GGG - chr1_2:78605838-78605857 None:intergenic 15.0%
!! TTCAAACAAAAAAAATTTAC+AGG - chr1_2:78605839-78605858 None:intergenic 15.0%
!!! TAAATTTTTTCGAAAAACAA+TGG + chr1_2:78606231-78606250 Msa0095030:intron 15.0%
!!! AATTCAAACTTTTTTTTTAC+AGG + chr1_2:78606800-78606819 Msa0095030:intron 15.0%
!!! ATTCAAACTTTTTTTTTACA+GGG + chr1_2:78606801-78606820 Msa0095030:intron 15.0%
!! GTAACATATCAATATATAAA+AGG - chr1_2:78606876-78606895 None:intergenic 15.0%
!!! ACTTAAATTTTTCCATTAAA+GGG + chr1_2:78607487-78607506 Msa0095030:intron 15.0%
!! CTAATGGAAAAATTTAAAAA+GGG - chr1_2:78607635-78607654 None:intergenic 15.0%
!! ACTAATGGAAAAATTTAAAA+AGG - chr1_2:78607636-78607655 None:intergenic 15.0%
!! ATAGCTTATATTGAAGAATT+TGG + chr1_2:78604952-78604971 Msa0095030:CDS 20.0%
!!! TTTTAATATTAAAAGAGTGC+GGG + chr1_2:78605533-78605552 Msa0095030:intron 20.0%
!!! TTCAAACTTTTTTTTTGACA+GGG - chr1_2:78605809-78605828 None:intergenic 20.0%
!!! ATTCAAACTTTTTTTTTGAC+AGG - chr1_2:78605810-78605829 None:intergenic 20.0%
!! TTTGGTGAAATATTGAAATT+AGG - chr1_2:78606959-78606978 None:intergenic 20.0%
!!! ATACAGAGTATTGTTTATAT+TGG - chr1_2:78607301-78607320 None:intergenic 20.0%
!!! TTTTATAAGTTGAATATGCA+AGG - chr1_2:78607423-78607442 None:intergenic 20.0%
!!! TTACTTTTACTTTTTCTTAG+TGG + chr1_2:78607464-78607483 Msa0095030:intron 20.0%
!!! GACTTAAATTTTTCCATTAA+AGG + chr1_2:78607486-78607505 Msa0095030:intron 20.0%
!!! CTTAAATTTTTCCATTAAAG+GGG + chr1_2:78607488-78607507 Msa0095030:intron 20.0%
!! CAATATAAGCTATGAGTTTT+TGG - chr1_2:78604945-78604964 None:intergenic 25.0%
! TATATTGAAGAATTTGGTCA+TGG + chr1_2:78604958-78604977 Msa0095030:CDS 25.0%
!! GTTATTGATAGTTGATTAGT+GGG - chr1_2:78605491-78605510 None:intergenic 25.0%
!! AGTTATTGATAGTTGATTAG+TGG - chr1_2:78605492-78605511 None:intergenic 25.0%
!!! ATTAAGGAGAATCTTTTTCA+GGG - chr1_2:78605608-78605627 None:intergenic 25.0%
! TGAAAAAGATTCTCCTTAAT+GGG + chr1_2:78605608-78605627 Msa0095030:intron 25.0%
! ATAAAAGCTTAATATACTGC+CGG - chr1_2:78605732-78605751 None:intergenic 25.0%
!!! TTTTATTTGAAAATGGTTCC+TGG - chr1_2:78606762-78606781 None:intergenic 25.0%
! ACTATGTAATCATCTACTAA+TGG - chr1_2:78607651-78607670 None:intergenic 25.0%
!!! TTCTTGTTAGTCTTTTCTTA+AGG - chr1_2:78607796-78607815 None:intergenic 25.0%
! TAAGAAAAGACTAACAAGAA+TGG + chr1_2:78607796-78607815 Msa0095030:CDS 25.0%
! AAGAAAAGACTAACAAGAAT+GGG + chr1_2:78607797-78607816 Msa0095030:CDS 25.0%
! TCAATATTATTGTTTGCCAT+AGG - chr1_2:78608283-78608302 None:intergenic 25.0%
! ATAATGAAGCTATAGATCAT+AGG + chr1_2:78608675-78608694 Msa0095030:exon 25.0%
ATAGTCTAGAGGTTGAAAAA+TGG + chr1_2:78604858-78604877 Msa0095030:exon 30.0%
TAGTCTAGAGGTTGAAAAAT+GGG + chr1_2:78604859-78604878 Msa0095030:exon 30.0%
GATAAAATACCAACCAGATT+TGG - chr1_2:78605004-78605023 None:intergenic 30.0%
! AACTTTCCTCTTTTTATGTC+TGG - chr1_2:78605170-78605189 None:intergenic 30.0%
TATTTACCTGTTTCCAAGAA+GGG - chr1_2:78605231-78605250 None:intergenic 30.0%
TCTCACACAAAGTTCTTAAA+TGG + chr1_2:78605463-78605482 Msa0095030:intron 30.0%
! CATTAAGGAGAATCTTTTTC+AGG - chr1_2:78605609-78605628 None:intergenic 30.0%
CTGAAAAAGATTCTCCTTAA+TGG + chr1_2:78605607-78605626 Msa0095030:intron 30.0%
GAAAAAGATTCTCCTTAATG+GGG + chr1_2:78605609-78605628 Msa0095030:intron 30.0%
AAAAAGATTCTCCTTAATGG+GGG + chr1_2:78605610-78605629 Msa0095030:intron 30.0%
!! TTTTGTTTGAAAATGGTCAC+TGG + chr1_2:78605848-78605867 Msa0095030:intron 30.0%
AGAGACTATGAACATCATAT+TGG - chr1_2:78606904-78606923 None:intergenic 30.0%
TAACATACAACTGATCTAAG+TGG + chr1_2:78607086-78607105 Msa0095030:intron 30.0%
ATGTGGTTAAACGAACTTAA+TGG + chr1_2:78607230-78607249 Msa0095030:intron 30.0%
AAAATTTAAAAAGGGCAACC+CGG - chr1_2:78607627-78607646 None:intergenic 30.0%
ACAATGAGATCAAGAACTAT+TGG + chr1_2:78607762-78607781 Msa0095030:CDS 30.0%
AGAAAAGACTAACAAGAATG+GGG + chr1_2:78607798-78607817 Msa0095030:CDS 30.0%
!!! TTTTTGGTTTGTGAGTTGTA+GGG - chr1_2:78607829-78607848 None:intergenic 30.0%
TTGTTAAGAAAAAGTCTTGC+AGG - chr1_2:78608013-78608032 None:intergenic 30.0%
!!! TCTTTGGTTGTTGTTGTTTT+TGG - chr1_2:78608112-78608131 None:intergenic 30.0%
AAAAACAACAACAACCAAAG+AGG + chr1_2:78608111-78608130 Msa0095030:CDS 30.0%
TGGAGATTCAATATCATCAT+TGG - chr1_2:78608188-78608207 None:intergenic 30.0%
!! TCATTGGTGTTATTGGTTAA+AGG - chr1_2:78608328-78608347 None:intergenic 30.0%
!! ATCATCATCATTGGTGTTAT+TGG - chr1_2:78608335-78608354 None:intergenic 30.0%
TCAGCAAGATGATGATATTA+TGG + chr1_2:78608438-78608457 Msa0095030:CDS 30.0%
! TGAAGAACATTTGTTGAAAC+AGG - chr1_2:78608520-78608539 None:intergenic 30.0%
! AAATGTTCTTCAAGTTCTTG+AGG + chr1_2:78608528-78608547 Msa0095030:CDS 30.0%
! AATGTTCTTCAAGTTCTTGA+GGG + chr1_2:78608529-78608548 Msa0095030:CDS 30.0%
CATTATTGGAATAGCATACT+TGG + chr1_2:78608613-78608632 Msa0095030:CDS 30.0%
TATAGTAGCTGTTTGACTAT+AGG + chr1_2:78608712-78608731 Msa0095030:three_prime_UTR 30.0%
ATAGTAGCTGTTTGACTATA+GGG + chr1_2:78608713-78608732 Msa0095030:three_prime_UTR 30.0%
!! ACTATAGGGAGTACTTAATT+AGG + chr1_2:78608727-78608746 Msa0095030:three_prime_UTR 30.0%
! AACCAACACGTGAATGTTTT+GGG - chr1_2:78604831-78604850 None:intergenic 35.0%
! AAACCAACACGTGAATGTTT+TGG - chr1_2:78604832-78604851 None:intergenic 35.0%
!!! GGTTTTGTTCTATAGTCTAG+AGG + chr1_2:78604847-78604866 Msa0095030:five_prime_UTR 35.0%
AATCCAACTTTCTCACAGAA+AGG - chr1_2:78604892-78604911 None:intergenic 35.0%
GAGAAAGTTGGATTGAAGAA+AGG + chr1_2:78604898-78604917 Msa0095030:CDS 35.0%
AAGAATTTGGTCATGGAAAC+TGG + chr1_2:78604965-78604984 Msa0095030:CDS 35.0%
AAATACCAACCAGATTTGGA+AGG - chr1_2:78605000-78605019 None:intergenic 35.0%
ATAAAAGGGCTTCAAAGATG+TGG + chr1_2:78605107-78605126 Msa0095030:intron 35.0%
!! AAGAGGAAAGTTTAGTTTGC+AGG + chr1_2:78605178-78605197 Msa0095030:CDS 35.0%
GTATTTACCTGTTTCCAAGA+AGG - chr1_2:78605232-78605251 None:intergenic 35.0%
ATGCTAAGCAATCATTCATG+TGG - chr1_2:78605329-78605348 None:intergenic 35.0%
AAAAATGGATGTCTCCATTG+TGG - chr1_2:78605352-78605371 None:intergenic 35.0%
! ACAATGGAGACATCCATTTT+TGG + chr1_2:78605351-78605370 Msa0095030:intron 35.0%
!! CAATGGAGACATCCATTTTT+GGG + chr1_2:78605352-78605371 Msa0095030:intron 35.0%
CCTAGTTAAGTACCCAAAAA+TGG - chr1_2:78605367-78605386 None:intergenic 35.0%
!!! CCATTTTTGGGTACTTAACT+AGG + chr1_2:78605364-78605383 Msa0095030:intron 35.0%
TTAAAGACCCAGTACCTATT+AGG - chr1_2:78605638-78605657 None:intergenic 35.0%
ATAGTAAGACCATCTCCAAT+GGG - chr1_2:78605672-78605691 None:intergenic 35.0%
! GATTTTCGTCCCTGTAATAT+AGG + chr1_2:78605766-78605785 Msa0095030:intron 35.0%
CAAAACACGCCTATATTACA+GGG - chr1_2:78606832-78606851 None:intergenic 35.0%
TCAAAACACGCCTATATTAC+AGG - chr1_2:78606831-78606850 None:intergenic 35.0%
TCAAAACACGCCTATATTAC+AGG + chr1_2:78606831-78606850 Msa0095030:intron 35.0%
CAAAACACGCCTATATTACA+GGG + chr1_2:78606832-78606851 Msa0095030:intron 35.0%
! GATTTTCGTCCCTGTAATAT+AGG - chr1_2:78605766-78605785 None:intergenic 35.0%
TAACATACAGCTGATCTAAG+TGG + chr1_2:78607047-78607066 Msa0095030:intron 35.0%
TACAACTGATCTAAGTGGTA+AGG + chr1_2:78607091-78607110 Msa0095030:intron 35.0%
TGGTTAAACGAACTTAATGG+TGG + chr1_2:78607233-78607252 Msa0095030:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr1_2:78607529-78607548 Msa0095030:intron 35.0%
AGTGAAGTGTAGATGATTTG+AGG + chr1_2:78607668-78607687 Msa0095030:intron 35.0%
ATCTCATTGTCTGTTCTTCT+TGG - chr1_2:78607752-78607771 None:intergenic 35.0%
!!! GTTTTTGGTTTGTGAGTTGT+AGG - chr1_2:78607830-78607849 None:intergenic 35.0%
GCTAAGGTTTATTGAGTCTT+TGG - chr1_2:78607876-78607895 None:intergenic 35.0%
TTAAGAAAAAGTCTTGCAGG+TGG - chr1_2:78608010-78608029 None:intergenic 35.0%
!!! GGTTGTTGTTGTTTTTGGTT+TGG - chr1_2:78608107-78608126 None:intergenic 35.0%
GTTATTGTTTGAGTCCTCTT+TGG - chr1_2:78608128-78608147 None:intergenic 35.0%
GGAAGTAAACTTTGATTGAG+TGG - chr1_2:78608307-78608326 None:intergenic 35.0%
CCATATCTCATCATCATCAT+TGG - chr1_2:78608344-78608363 None:intergenic 35.0%
! CCAATGATGATGATGAGATA+TGG + chr1_2:78608341-78608360 Msa0095030:CDS 35.0%
GCAAGATGATGATATTATGG+CGG + chr1_2:78608441-78608460 Msa0095030:CDS 35.0%
! AGAACATTTGTTGAAACAGG+AGG - chr1_2:78608517-78608536 None:intergenic 35.0%
TCGAGGAGAATAAGCATTAT+TGG + chr1_2:78608599-78608618 Msa0095030:CDS 35.0%
CTAGAGGTTGAAAAATGGGT+AGG + chr1_2:78604863-78604882 Msa0095030:exon 40.0%
TCACCTTTCTGTGAGAAAGT+TGG + chr1_2:78604886-78604905 Msa0095030:CDS 40.0%
TTGGATTGAAGAAAGGACCA+TGG + chr1_2:78604905-78604924 Msa0095030:CDS 40.0%
!!! ATGAGTTTTTGGTCTTCCTC+AGG - chr1_2:78604934-78604953 None:intergenic 40.0%
TATTGCCTTCCAAATCTGGT+TGG + chr1_2:78604992-78605011 Msa0095030:intron 40.0%
! CTCTTTTTATGTCTGGTCGA+AGG - chr1_2:78605163-78605182 None:intergenic 40.0%
CTTCGACCAGACATAAAAAG+AGG + chr1_2:78605161-78605180 Msa0095030:CDS 40.0%
ATTCAACTTCATGCCCTTCT+TGG + chr1_2:78605215-78605234 Msa0095030:CDS 40.0%
CAACACTCTCTCATATACTC+CGG + chr1_2:78605296-78605315 Msa0095030:intron 40.0%
TCATTCATGTGGTGACTAAC+CGG - chr1_2:78605318-78605337 None:intergenic 40.0%
TGATTGCTTAGCATCCACAA+TGG + chr1_2:78605335-78605354 Msa0095030:intron 40.0%
ACTTTGTGTGAGATCTGAGT+TGG - chr1_2:78605456-78605475 None:intergenic 40.0%
TTAATGTCTAACCCTCCCAT+TGG + chr1_2:78605654-78605673 Msa0095030:intron 40.0%
CATAGTAAGACCATCTCCAA+TGG - chr1_2:78605673-78605692 None:intergenic 40.0%
ATAGTACTCACTCCCTAACT+TGG + chr1_2:78605695-78605714 Msa0095030:intron 40.0%
GTGGTCAACTTTCCAAGTTA+GGG - chr1_2:78605710-78605729 None:intergenic 40.0%
TAACTTGGAAAGTTGACCAC+CGG + chr1_2:78605710-78605729 Msa0095030:intron 40.0%
AAAGCTTAATATACTGCCGG+TGG - chr1_2:78605729-78605748 None:intergenic 40.0%
CGTTTCAAAAGTTGCACAGT+CGG - chr1_2:78605921-78605940 None:intergenic 40.0%
!!! ACTGTGCAACTTTTGAAACG+TGG + chr1_2:78605921-78605940 Msa0095030:intron 40.0%
TACAGCTGATCTAAGTGGTA+AGG + chr1_2:78607052-78607071 Msa0095030:intron 40.0%
AAAAGGACATGTTGCTCTTG+AGG + chr1_2:78607343-78607362 Msa0095030:intron 40.0%
TTCCATTAAAGGGGAAACCT+TGG + chr1_2:78607497-78607516 Msa0095030:intron 40.0%
ATTGATCATGTGCACACAGA+TGG + chr1_2:78607705-78607724 Msa0095030:intron 40.0%
CTCAATAAACCTTAGCCACA+TGG + chr1_2:78607880-78607899 Msa0095030:CDS 40.0%
TTGAGGATATCAAGACAAGG+TGG - chr1_2:78608064-78608083 None:intergenic 40.0%
!! GCTTTGAGGATATCAAGACA+AGG - chr1_2:78608067-78608086 None:intergenic 40.0%
GTCTTGATATCCTCAAAGCA+TGG + chr1_2:78608068-78608087 Msa0095030:CDS 40.0%
ATGAACTTTGCCATGCTTTG+AGG - chr1_2:78608081-78608100 None:intergenic 40.0%
TCAAAGCATGGCAAAGTTCA+TGG + chr1_2:78608080-78608099 Msa0095030:CDS 40.0%
AAGGAAGCAATGTTGTTCCA+GGG - chr1_2:78608228-78608247 None:intergenic 40.0%
AAAGGAAGCAATGTTGTTCC+AGG - chr1_2:78608229-78608248 None:intergenic 40.0%
AGAGGAACAGAAAGAGGTAA+AGG - chr1_2:78608247-78608266 None:intergenic 40.0%
ACTAAGCATAACACAGAAGC+TGG + chr1_2:78608379-78608398 Msa0095030:CDS 40.0%
GGTGATCAGGAAAATTTGGA+TGG + chr1_2:78608553-78608572 Msa0095030:CDS 40.0%
CTCCCAAAACATTCACGTGT+TGG + chr1_2:78604826-78604845 Msa0095030:five_prime_UTR 45.0%
CGTGTATTGCCTTCCAAATC+TGG + chr1_2:78604988-78605007 Msa0095030:CDS 45.0%
GAAAGAGCTGCAGACTAAGA+TGG + chr1_2:78605129-78605148 Msa0095030:CDS 45.0%
TTCATGCCCTTCTTGGAAAC+AGG + chr1_2:78605222-78605241 Msa0095030:CDS 45.0%
! CGGAGTATATGAGAGAGTGT+TGG - chr1_2:78605298-78605317 None:intergenic 45.0%
! TGTGTGAGATCTGAGTTGGA+GGG - chr1_2:78605452-78605471 None:intergenic 45.0%
! TTGTGTGAGATCTGAGTTGG+AGG - chr1_2:78605453-78605472 None:intergenic 45.0%
TAAGACCCCCCAACTTTAAG+CGG - chr1_2:78605561-78605580 None:intergenic 45.0%
GGGGGTCTTAAATAAGACTC+TGG + chr1_2:78605571-78605590 Msa0095030:intron 45.0%
CCTATTAGGTACCCCCATTA+AGG - chr1_2:78605624-78605643 None:intergenic 45.0%
!! CCTTAATGGGGGTACCTAAT+AGG + chr1_2:78605621-78605640 Msa0095030:intron 45.0%
TAAGACCATCTCCAATGGGA+GGG - chr1_2:78605668-78605687 None:intergenic 45.0%
GGTGGTCAACTTTCCAAGTT+AGG - chr1_2:78605711-78605730 None:intergenic 45.0%
TTGGCATGGTATTTGTCACG+TGG + chr1_2:78605889-78605908 Msa0095030:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr1_2:78607533-78607552 Msa0095030:intron 45.0%
! TTACCCAGTTTTTGCACACC+AGG - chr1_2:78607584-78607603 None:intergenic 45.0%
TCTTGGAAGTTGAGCTGCTA+TGG - chr1_2:78607735-78607754 None:intergenic 45.0%
!! TTGGTGCTACTACCAGTTGT+GGG - chr1_2:78607857-78607876 None:intergenic 45.0%
!! TTTGGTGCTACTACCAGTTG+TGG - chr1_2:78607858-78607877 None:intergenic 45.0%
GGAAGTGAAGGTTGAATCAG+TGG - chr1_2:78608043-78608062 None:intergenic 45.0%
TCAAGACAAGGTGGAAGTGA+AGG - chr1_2:78608055-78608074 None:intergenic 45.0%
GGGAAGTTCAAAGTGGATGT+TGG - chr1_2:78608208-78608227 None:intergenic 45.0%
ACATCCACTTTGAACTTCCC+TGG + chr1_2:78608208-78608227 Msa0095030:CDS 45.0%
TGTTCCAGGGAAGTTCAAAG+TGG - chr1_2:78608215-78608234 None:intergenic 45.0%
ACTGGAAGAGGAACAGAAAG+AGG - chr1_2:78608253-78608272 None:intergenic 45.0%
ATAGGAGCAGAAACTGGAAG+AGG - chr1_2:78608265-78608284 None:intergenic 45.0%
TCTTCCAGTTTCTGCTCCTA+TGG + chr1_2:78608264-78608283 Msa0095030:CDS 45.0%
TTTGCCATAGGAGCAGAAAC+TGG - chr1_2:78608271-78608290 None:intergenic 45.0%
TGATGATATTATGGCGGCTG+TGG + chr1_2:78608447-78608466 Msa0095030:CDS 45.0%
!! GTGGAAGCATTTAGAGCAAG+CGG + chr1_2:78608466-78608485 Msa0095030:CDS 45.0%
! GTTCTTCAAGTTCTTGAGGG+TGG + chr1_2:78608532-78608551 Msa0095030:CDS 45.0%
GGGTGGTGATCAGGAAAATT+TGG + chr1_2:78608549-78608568 Msa0095030:CDS 45.0%
GATGTGTAACGTGAATCTCG+AGG + chr1_2:78608582-78608601 Msa0095030:CDS 45.0%
!!! TTTATAAAATTTTTGATAAA+AGG + chr1_2:78605092-78605111 Msa0095030:intron 5.0%
!!! TTATAAAATTTTTGATAAAA+GGG + chr1_2:78605093-78605112 Msa0095030:intron 5.0%
!!! AAATTTATTTTAAGATTTTT+CGG - chr1_2:78606085-78606104 None:intergenic 5.0%
!!! TTATAATTTTCATATTTTTT+CGG + chr1_2:78606499-78606518 Msa0095030:intron 5.0%
!!! TTTTAAAATTTAATATTATG+TGG + chr1_2:78606659-78606678 Msa0095030:intron 5.0%
!!! AAAAATTTTTTATTTGAAAA+TGG - chr1_2:78606769-78606788 None:intergenic 5.0%
!!! ATAACTTTTTATATTAAAAA+AGG + chr1_2:78607326-78607345 Msa0095030:intron 5.0%
AAGACCCCCCAACTTTAAGC+GGG - chr1_2:78605560-78605579 None:intergenic 50.0%
!! TGGGGGTACCTAATAGGTAC+TGG + chr1_2:78605627-78605646 Msa0095030:intron 50.0%
!! GGGGGTACCTAATAGGTACT+GGG + chr1_2:78605628-78605647 Msa0095030:intron 50.0%
TCTAACCCTCCCATTGGAGA+TGG + chr1_2:78605660-78605679 Msa0095030:intron 50.0%
GTAAGACCATCTCCAATGGG+AGG - chr1_2:78605669-78605688 None:intergenic 50.0%
TGCCAAGTCAGCTGAACAGT+GGG - chr1_2:78606735-78606754 None:intergenic 50.0%
ATGCCAAGTCAGCTGAACAG+TGG - chr1_2:78606734-78606753 None:intergenic 50.0%
!! ACTGTTCAGCTGACTTGGCA+TGG + chr1_2:78605875-78605894 Msa0095030:intron 50.0%
ATATTATGTGGCACGCCACG+TGG + chr1_2:78606671-78606690 Msa0095030:intron 50.0%
! ACTGTGCAACTTTTGCCACG+TGG - chr1_2:78606689-78606708 None:intergenic 50.0%
!!! CAGCTGACTTGGCATGGTTT+TGG - chr1_2:78606729-78606748 None:intergenic 50.0%
!! ACTGTTCAGCTGACTTGGCA+TGG - chr1_2:78605875-78605894 None:intergenic 50.0%
ATGCCAAGTCAGCTGAACAG+TGG + chr1_2:78606734-78606753 Msa0095030:intron 50.0%
TGCCAAGTCAGCTGAACAGT+GGG + chr1_2:78606735-78606754 Msa0095030:intron 50.0%
CGCCAAGGTTTCCCCTTTAA+TGG - chr1_2:78607502-78607521 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr1_2:78607517-78607536 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr1_2:78607539-78607558 Msa0095030:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr1_2:78607540-78607559 Msa0095030:intron 50.0%
TTCAAGTCCTGGAAACAGCC+TGG + chr1_2:78607563-78607582 Msa0095030:intron 50.0%
ACAGCCTGGTGTGCAAAAAC+TGG + chr1_2:78607577-78607596 Msa0095030:intron 50.0%
CAGCCTGGTGTGCAAAAACT+GGG + chr1_2:78607578-78607597 Msa0095030:intron 50.0%
! CCAGTTGTGGGGTCTGTTTT+TGG - chr1_2:78607845-78607864 None:intergenic 50.0%
CCAAAAACAGACCCCACAAC+TGG + chr1_2:78607842-78607861 Msa0095030:CDS 50.0%
!! TGGTGCTACTACCAGTTGTG+GGG - chr1_2:78607856-78607875 None:intergenic 50.0%
ACCTTAGCCACATGGCTCAA+TGG + chr1_2:78607888-78607907 Msa0095030:CDS 50.0%
CCTTAGCCACATGGCTCAAT+GGG + chr1_2:78607889-78607908 Msa0095030:CDS 50.0%
!! TCAATGGGAGAGTGCTCGTT+TGG + chr1_2:78607904-78607923 Msa0095030:CDS 50.0%
AAAAGTCTTGCAGGTGGCTG+TGG - chr1_2:78608004-78608023 None:intergenic 50.0%
! GAAGCATTTAGAGCAAGCGG+TGG + chr1_2:78608469-78608488 Msa0095030:CDS 50.0%
AGTTCTTGAGGGTGGTGATC+AGG + chr1_2:78608540-78608559 Msa0095030:CDS 50.0%
GAAAGGACCATGGACTCCTG+AGG + chr1_2:78604915-78604934 Msa0095030:CDS 55.0%
TGGTCTTCCTCAGGAGTCCA+TGG - chr1_2:78604925-78604944 None:intergenic 55.0%
TGCGGGTCCCGCTTAAAGTT+GGG + chr1_2:78605550-78605569 Msa0095030:intron 55.0%
GCCAAGTCAGCTGAACAGTG+GGG - chr1_2:78606736-78606755 None:intergenic 55.0%
!! TTTGAAACGTGGCGCTGACG+TGG + chr1_2:78605932-78605951 Msa0095030:intron 55.0%
!!! TTGGCATGGTTTTGGCCACG+TGG - chr1_2:78606721-78606740 None:intergenic 55.0%
GCCAAGTCAGCTGAACAGTG+GGG + chr1_2:78606736-78606755 Msa0095030:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr1_2:78607552-78607571 Msa0095030:intron 55.0%
! TTGCACACCAGGCTGTTTCC+AGG - chr1_2:78607573-78607592 None:intergenic 55.0%
GCTGCGCGAGATTAATGCAC+CGG + chr1_2:78607605-78607624 Msa0095030:intron 55.0%
CTGCGCGAGATTAATGCACC+GGG + chr1_2:78607606-78607625 Msa0095030:intron 55.0%
CCCATTGAGCCATGTGGCTA+AGG - chr1_2:78607892-78607911 None:intergenic 55.0%
CACTCTCCCATTGAGCCATG+TGG - chr1_2:78607898-78607917 None:intergenic 55.0%
TCTTGCAGGTGGCTGTGGTT+TGG - chr1_2:78607999-78608018 None:intergenic 55.0%
GTGCGGGTCCCGCTTAAAGT+TGG + chr1_2:78605549-78605568 Msa0095030:intron 60.0%
GCGGGTCCCGCTTAAAGTTG+GGG + chr1_2:78605551-78605570 Msa0095030:intron 60.0%
CGGGTCCCGCTTAAAGTTGG+GGG + chr1_2:78605552-78605571 Msa0095030:intron 60.0%
GGGTCCCGCTTAAAGTTGGG+GGG + chr1_2:78605553-78605572 Msa0095030:intron 60.0%
GCCCCACTGTTCAGCTGACT+TGG + chr1_2:78605870-78605889 Msa0095030:intron 60.0%
CACAGTCAGCAACTGCCACG+TGG + chr1_2:78606703-78606722 Msa0095030:intron 60.0%
GCCCCACTGTTCAGCTGACT+TGG - chr1_2:78605870-78605889 None:intergenic 60.0%
AGGGGAAACCTTGGCGCAAC+TGG + chr1_2:78607506-78607525 Msa0095030:intron 60.0%
! TGCAGGTGGCTGTGGTTTGG+AGG - chr1_2:78607996-78608015 None:intergenic 60.0%
!! GAAACGTGGCGCTGACGTGG+CGG + chr1_2:78605935-78605954 Msa0095030:intron 65.0%
GTCAGCTGAACAGTGGGGCC+AGG + chr1_2:78606741-78606760 Msa0095030:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 78604772 78608783 78604772 ID=Msa0095030;Name=Msa0095030
chr1_2 mRNA 78604772 78608783 78604772 ID=Msa0095030-mRNA-1;Parent=Msa0095030;Name=Msa0095030-mRNA-1;_AED=0.03;_eAED=0.03;_QI=105|1|1|1|1|1|3|108|404
chr1_2 exon 78604772 78605009 78604772 ID=Msa0095030-mRNA-1:exon:28013;Parent=Msa0095030-mRNA-1
chr1_2 exon 78605114 78605243 78605114 ID=Msa0095030-mRNA-1:exon:28014;Parent=Msa0095030-mRNA-1
chr1_2 exon 78607724 78608783 78607724 ID=Msa0095030-mRNA-1:exon:28015;Parent=Msa0095030-mRNA-1
chr1_2 five_prime_UTR 78604772 78604876 78604772 ID=Msa0095030-mRNA-1:five_prime_utr;Parent=Msa0095030-mRNA-1
chr1_2 CDS 78604877 78605009 78604877 ID=Msa0095030-mRNA-1:cds;Parent=Msa0095030-mRNA-1
chr1_2 CDS 78605114 78605243 78605114 ID=Msa0095030-mRNA-1:cds;Parent=Msa0095030-mRNA-1
chr1_2 CDS 78607724 78608675 78607724 ID=Msa0095030-mRNA-1:cds;Parent=Msa0095030-mRNA-1
chr1_2 three_prime_UTR 78608676 78608783 78608676 ID=Msa0095030-mRNA-1:three_prime_utr;Parent=Msa0095030-mRNA-1
Gene Sequence

>Msa0095030

ATGGGTAGGTCACCTTTCTGTGAGAAAGTTGGATTGAAGAAAGGACCATGGACTCCTGAGGAAGACCAAAAACTCATAGCTTATATTGAAGAATTTGGTCATGGAAACTGGCGTGTATTGCCTTCCAAATCTGGGCTTCAAAGATGTGGAAAGAGCTGCAGACTAAGATGGACTAACTACCTTCGACCAGACATAAAAAGAGGAAAGTTTAGTTTGCAGGAAGAACAAACTATTATTCAACTTCATGCCCTTCTTGGAAACAGATGGTCATCCATAGCAGCTCAACTTCCAAGAAGAACAGACAATGAGATCAAGAACTATTGGAGCACACACCTTAAGAAAAGACTAACAAGAATGGGGATAGACCCTACAACTCACAAACCAAAAACAGACCCCACAACTGGTAGTAGCACCAAAGACTCAATAAACCTTAGCCACATGGCTCAATGGGAGAGTGCTCGTTTGGAAGCAGAAGCAAGATTTGTTAGAGAATCTAATAAGCTGAAAGCTCAAAGACAACTTGAGTTTGAATCCTCCAAACCACAGCCACCTGCAAGACTTTTTCTTAACAAAATCACACCACTGATTCAACCTTCACTTCCACCTTGTCTTGATATCCTCAAAGCATGGCAAAGTTCATGGTCCAAACCAAAAACAACAACAACCAAAGAGGACTCAAACAATAACAACAACAAAATGCATACTATGTATGCTATGATGTTATCCAATGATGATATTGAATCTCCAACATCCACTTTGAACTTCCCTGGAACAACATTGCTTCCTTTACCTCTTTCTGTTCCTCTTCCAGTTTCTGCTCCTATGGCAAACAATAATATTGAACCACTCAATCAAAGTTTACTTCCTTTAACCAATAACACCAATGATGATGATGAGATATGGAAACAATTCAATTTTACTAAGCATAACACAGAAGCTGGTCGTGATCATGATGACAATAACACTATGTTGAACTTTCAGCAAGATGATGATATTATGGCGGCTGTGGAAGCATTTAGAGCAAGCGGTGGATTTGATAATAATATCAATACACCTCCTGTTTCAACAAATGTTCTTCAAGTTCTTGAGGGTGGTGATCAGGAAAATTTGGATGGAAGCATGATGTGTAACGTGAATCTCGAGGAGAATAAGCATTATTGGAATAGCATACTTGGTTTGATTAATGAATCTGATGATATGAACATTGTTCTATAA
Protein sequence

>Msa0095030

MGRSPFCEKVGLKKGPWTPEEDQKLIAYIEEFGHGNWRVLPSKSGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSSIAAQLPRRTDNEIKNYWSTHLKKRLTRMGIDPTTHKPKTDPTTGSSTKDSINLSHMAQWESARLEAEARFVRESNKLKAQRQLEFESSKPQPPARLFLNKITPLIQPSLPPCLDILKAWQSSWSKPKTTTTKEDSNNNNNKMHTMYAMMLSNDDIESPTSTLNFPGTTLLPLPLSVPLPVSAPMANNNIEPLNQSLLPLTNNTNDDDEIWKQFNFTKHNTEAGRDHDDNNTMLNFQQDDDIMAAVEAFRASGGFDNNINTPPVSTNVLQVLEGGDQENLDGSMMCNVNLEENKHYWNSILGLINESDDMNIVL*