Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098890 | XP_003588984.1 | 93.827 | 81 | 5 | 0 | 1 | 81 | 368 | 448 | 5.55e-43 | 171 |
| Msa0098890 | XP_003588984.1 | 96.452 | 451 | 16 | 0 | 144 | 594 | 3 | 453 | 0.0 | 906 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098890 | sp|O04353|DES6_BOROF | 65.596 | 436 | 150 | 0 | 159 | 594 | 13 | 448 | 0.0 | 633 |
| Msa0098890 | sp|O04353|DES6_BOROF | 76.543 | 81 | 19 | 0 | 1 | 81 | 363 | 443 | 2.40e-36 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098890 | G7I9X4 | 93.827 | 81 | 5 | 0 | 1 | 81 | 368 | 448 | 2.65e-43 | 171 |
| Msa0098890 | G7I9X4 | 96.452 | 451 | 16 | 0 | 144 | 594 | 3 | 453 | 0.0 | 906 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0098890 | Msa0099030 | 0.894351 | 2.676549e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098890 | MtrunA17_Chr1g0151391 | 96.452 | 451 | 16 | 0 | 144 | 594 | 3 | 453 | 0.0 | 906 |
| Msa0098890 | MtrunA17_Chr1g0151391 | 93.827 | 81 | 5 | 0 | 1 | 81 | 368 | 448 | 5.10e-47 | 171 |
| Msa0098890 | MtrunA17_Chr8g0361931 | 61.830 | 448 | 170 | 1 | 148 | 594 | 2 | 449 | 0.0 | 597 |
| Msa0098890 | MtrunA17_Chr8g0361931 | 75.309 | 81 | 20 | 0 | 1 | 81 | 364 | 444 | 3.95e-33 | 132 |
| Msa0098890 | MtrunA17_Chr1g0151371 | 75.766 | 359 | 83 | 1 | 149 | 507 | 7 | 361 | 0.0 | 561 |
| Msa0098890 | MtrunA17_Chr1g0151381 | 89.552 | 67 | 6 | 1 | 82 | 147 | 73 | 139 | 8.17e-34 | 126 |
| Msa0098890 | MtrunA17_Chr1g0151361 | 68.056 | 72 | 22 | 1 | 88 | 158 | 205 | 276 | 4.36e-20 | 90.9 |
| Msa0098890 | MtrunA17_Chr5g0419651 | 36.111 | 72 | 45 | 1 | 156 | 226 | 9 | 80 | 1.75e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098890 | AT3G61580.1 | 63.964 | 444 | 160 | 0 | 151 | 594 | 6 | 449 | 0.0 | 616 |
| Msa0098890 | AT3G61580.1 | 70.370 | 81 | 24 | 0 | 1 | 81 | 364 | 444 | 4.91e-33 | 132 |
| Msa0098890 | AT2G46210.1 | 62.864 | 447 | 166 | 0 | 148 | 594 | 3 | 449 | 0.0 | 616 |
| Msa0098890 | AT2G46210.1 | 72.840 | 81 | 22 | 0 | 1 | 81 | 364 | 444 | 3.81e-34 | 135 |
| Msa0098890 | AT1G26340.1 | 42.857 | 70 | 39 | 1 | 156 | 224 | 9 | 78 | 6.12e-12 | 63.9 |
Find 144 sgRNAs with CRISPR-Local
Find 653 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACAATTGTGTGTCTTTC+TGG | 0.051765 | 1_3:+4916056 | Msa0098890:CDS |
| CGATTCCGAGAAATTTAATT+TGG | 0.111749 | 1_3:+4905041 | Msa0098890:CDS |
| CTTATAATTGCGTGTCTTTC+TGG | 0.115276 | 1_3:+4904951 | Msa0098890:CDS |
| ATGTTCTTTGTCAGTGTTTA+TGG | 0.122801 | 1_3:+4915212 | Msa0098890:CDS |
| TGGTTTCTTGTTTACCTAAT+TGG | 0.140709 | 1_3:+4915741 | Msa0098890:CDS |
| CAGTTTATGCAGATTCTTTC+TGG | 0.150958 | 1_3:+4915365 | Msa0098890:CDS |
| GCGTTAGTGCACGTGCTTTC+TGG | 0.174585 | 1_3:+4915254 | Msa0098890:CDS |
| GCATAAACTGATTCCATTTC+CGG | 0.178406 | 1_3:-4915352 | None:intergenic |
| GAGGATTAATGGGTCTTCTT+TGG | 0.243891 | 1_3:+4915276 | Msa0098890:CDS |
| GGTTTCTTGTTTACCTAATT+GGG | 0.245592 | 1_3:+4915742 | Msa0098890:CDS |
| TCTTGGATGGATTGGTTTCA+TGG | 0.255282 | 1_3:+4904821 | None:intergenic |
| TCTTGGATGGATTGGTTTCA+TGG | 0.255282 | 1_3:+4915926 | Msa0098890:CDS |
| TTTGAGGAATGCGGCTTTGC+AGG | 0.255426 | 1_3:+4916105 | Msa0098890:CDS |
| CGTGCTTTCTGGAGGATTAA+TGG | 0.261392 | 1_3:+4915265 | Msa0098890:CDS |
| CTTTCTGGTAATGTTCTTGC+TGG | 0.262893 | 1_3:+4915380 | Msa0098890:CDS |
| TTGATGTGAAGTGTTCTTCT+TGG | 0.272066 | 1_3:+4915909 | Msa0098890:CDS |
| CTGGGTTTGTTCGAAGAAAA+AGG | 0.274037 | 1_3:+4915152 | Msa0098890:CDS |
| AAAGAACATAACAGAAATTA+TGG | 0.280581 | 1_3:-4915198 | None:intergenic |
| TCATGATTCTGGTCATTATC+AGG | 0.288041 | 1_3:+4915319 | Msa0098890:CDS |
| GGTTGGATTGGTCATGATTC+TGG | 0.304792 | 1_3:+4915308 | Msa0098890:CDS |
| AGATCTACGACGTTTCAAAA+TGG | 0.310327 | 1_3:+4914934 | Msa0098890:CDS |
| CGGTTCCGAGAAATTTAGTT+TGG | 0.314806 | 1_3:+4916146 | Msa0098890:CDS |
| AACTGCCAGTGGCAAAGTTT+TGG | 0.314883 | 1_3:-4915061 | None:intergenic |
| CAGAAAGACACGCAATTATA+AGG | 0.319932 | 1_3:-4904950 | None:intergenic |
| CATAAACTGCGCATCATAGA+AGG | 0.328530 | 1_3:+4907249 | Msa0098890:CDS |
| TTCTGGTCATTATCAGGTTA+TGG | 0.330574 | 1_3:+4915325 | Msa0098890:CDS |
| GCTTCCCAAATTAAATTTCT+CGG | 0.330951 | 1_3:-4905046 | None:intergenic |
| AAAACCCTCTCACCCCAATT+AGG | 0.338161 | 1_3:-4915755 | None:intergenic |
| AAAAGTTCCATCTTTCTATT+AGG | 0.338194 | 1_3:-4915683 | None:intergenic |
| ACATCCAAGTAGACACGATT+TGG | 0.362567 | 1_3:+4907360 | Msa0098890:intron |
| TTTCTCCGAACTAACCAAAC+TGG | 0.365435 | 1_3:+4915133 | Msa0098890:CDS |
| GTGCTTTCTGGAGGATTAAT+GGG | 0.367934 | 1_3:+4915266 | Msa0098890:CDS |
| TTTGAGGAAGATTTCGCCTT+TGG | 0.369780 | 1_3:+4916003 | Msa0098890:CDS |
| GAAAGTCTCGCCTTTGGTTA+AGG | 0.371815 | 1_3:+4904904 | Msa0098890:CDS |
| TGCTTACTATTCAGACTTTG+AGG | 0.372522 | 1_3:+4916089 | Msa0098890:CDS |
| GAAGATTTCGCCTTTGGTTA+AGG | 0.373280 | 1_3:+4916009 | Msa0098890:CDS |
| TTCTTTGGATTCAAAGTGGT+TGG | 0.376121 | 1_3:+4915291 | Msa0098890:CDS |
| TTCTTCGAACAAACCCAGTT+TGG | 0.378932 | 1_3:-4915147 | None:intergenic |
| AGGTTATGGTTAACCGGAAA+TGG | 0.379608 | 1_3:+4915339 | Msa0098890:CDS |
| CAAACCCAGTTTGGTTAGTT+CGG | 0.383963 | 1_3:-4915138 | None:intergenic |
| GTCCACCGACGGCTCATGAT+TGG | 0.391021 | 1_3:+4915861 | Msa0098890:CDS |
| CAAATTAAATTTCTCGGAAT+CGG | 0.394288 | 1_3:-4905040 | None:intergenic |
| GTCGTAGATCTTGCCGTCAA+TGG | 0.400669 | 1_3:-4914922 | None:intergenic |
| GTTTGGTTAGTTCGGAGAAA+AGG | 0.402748 | 1_3:-4915130 | None:intergenic |
| GGCTACCTCGGTGTAGTCTA+AGG | 0.404877 | 1_3:+4904882 | Msa0098890:CDS |
| AGTCTCCTTCTTGGATGGAT+TGG | 0.406129 | 1_3:+4904813 | None:intergenic |
| TAAGCATTGAATGGTGGAAA+TGG | 0.406654 | 1_3:+4915405 | Msa0098890:CDS |
| AATGGTAAATGTTGAAGATC+AGG | 0.410263 | 1_3:-4915473 | None:intergenic |
| GCTTCCCAAACTAAATTTCT+CGG | 0.412040 | 1_3:-4916151 | None:intergenic |
| ATTATCAGGTTATGGTTAAC+CGG | 0.413560 | 1_3:+4915333 | Msa0098890:CDS |
| TTGGATTTGGTACCCTTTGT+TGG | 0.423243 | 1_3:+4915721 | Msa0098890:CDS |
| CTTAGTTGTGGAATTTATCA+AGG | 0.423928 | 1_3:+4907314 | Msa0098890:CDS |
| ATCTGTTTCCGCGGCTACCT+CGG | 0.427424 | 1_3:+4904870 | Msa0098890:CDS |
| CAAACTAAATTTCTCGGAAC+CGG | 0.433414 | 1_3:-4916145 | None:intergenic |
| AGTGTTCTTCTTGGATGGAT+TGG | 0.433868 | 1_3:+4915918 | Msa0098890:CDS |
| GATTCCGAGAAATTTAATTT+GGG | 0.446329 | 1_3:+4905042 | Msa0098890:CDS |
| GGAATGCTGCTTTGCAAGCT+CGG | 0.448095 | 1_3:+4905005 | Msa0098890:CDS |
| TTTGGTTAGTTCGGAGAAAA+GGG | 0.451322 | 1_3:-4915129 | None:intergenic |
| CATCTTGGCCGGCGAGGTTG+AGG | 0.457435 | 1_3:-4914989 | None:intergenic |
| GATCTACGACGTTTCAAAAT+GGG | 0.459792 | 1_3:+4914935 | Msa0098890:CDS |
| CAGAAAGACACACAATTGTA+AGG | 0.461532 | 1_3:-4916055 | None:intergenic |
| GTCTTCCACGGTGTAATTTG+AGG | 0.464009 | 1_3:+4915987 | Msa0098890:CDS |
| GGCAAGGGATCTTACTAAAC+CGG | 0.465661 | 1_3:+4916126 | Msa0098890:CDS |
| TGTGAAGTGTTCTTCTTGGA+TGG | 0.468484 | 1_3:+4915913 | Msa0098890:CDS |
| TCTTGGTCAGTTACCAGCAT+TGG | 0.468669 | 1_3:+4915579 | Msa0098890:CDS |
| TGGGAAGCTGTTAATACTCA+TGG | 0.473340 | 1_3:+4916166 | Msa0098890:CDS |
| TCTAAGGAAAGTCTCGCCTT+TGG | 0.473776 | 1_3:+4904898 | Msa0098890:CDS |
| TGGATTCAAAGTGGTTGGAT+TGG | 0.479141 | 1_3:+4915296 | Msa0098890:CDS |
| CTCGCCGCCGGGATGGTGGT+TGG | 0.480612 | 1_3:-4914958 | None:intergenic |
| ATTTGTTTCCGCGTCTTCCA+CGG | 0.485220 | 1_3:+4915975 | Msa0098890:CDS |
| TGCGGGTATAGTTTCATCCA+TGG | 0.486447 | 1_3:-4907193 | None:intergenic |
| GGAATGCATCAGTGACATCT+TGG | 0.491255 | 1_3:-4915004 | None:intergenic |
| GAGATAAACCTTTCCATTCA+CGG | 0.491318 | 1_3:+4907388 | Msa0098890:CDS |
| CGTCTGAATGGTAAGTAGAT+TGG | 0.492566 | 1_3:-4904978 | None:intergenic |
| GGTTCCGAGAAATTTAGTTT+GGG | 0.492737 | 1_3:+4916147 | Msa0098890:CDS |
| GTTTCTTGTTTACCTAATTG+GGG | 0.497767 | 1_3:+4915743 | Msa0098890:CDS |
| GTTTACCTAATTGGGGTGAG+AGG | 0.499023 | 1_3:+4915750 | Msa0098890:CDS |
| TTTACCTAATTGGGGTGAGA+GGG | 0.503473 | 1_3:+4915751 | Msa0098890:CDS |
| GAGGAGAGGAAGCTCGCCGC+CGG | 0.506758 | 1_3:-4914970 | None:intergenic |
| TGGTTTGAGAAGCAAGCTCA+TGG | 0.509660 | 1_3:+4915881 | Msa0098890:CDS |
| AAAAGTGCCTAATAGAAAGA+TGG | 0.513187 | 1_3:+4915676 | Msa0098890:CDS |
| GCGAGGACTAGAACCGTGAA+TGG | 0.513821 | 1_3:-4907401 | None:intergenic |
| GAATGCTGCTTTGCAAGCTC+GGG | 0.516848 | 1_3:+4905006 | Msa0098890:CDS |
| GAAGCTCGCCGCCGGGATGG+TGG | 0.525178 | 1_3:-4914962 | None:intergenic |
| CAATTGTGTGTCTTTCTGGA+AGG | 0.526261 | 1_3:+4916060 | Msa0098890:CDS |
| AACTCTAAAGCATCTTCTGC+GGG | 0.527388 | 1_3:-4907210 | None:intergenic |
| CAGGATAATAACTCCAATGC+TGG | 0.530353 | 1_3:-4915592 | None:intergenic |
| TGTTGACAGTTCAGAATCCA+TGG | 0.537906 | 1_3:+4907176 | Msa0098890:CDS |
| AGCATTCCTCAACGTCTGAA+TGG | 0.538587 | 1_3:-4904990 | None:intergenic |
| GGAATGCGGCTTTGCAGGCA+AGG | 0.538823 | 1_3:+4916110 | Msa0098890:CDS |
| TGCATCAGTGACATCTTGGC+CGG | 0.539741 | 1_3:-4915000 | None:intergenic |
| TTCTCCGAACTAACCAAACT+GGG | 0.542349 | 1_3:+4915134 | Msa0098890:CDS |
| TGAATTGACAAGCTTAGTTG+TGG | 0.543500 | 1_3:+4907302 | Msa0098890:CDS |
| ACAACACTCGCGGCGATGCA+TGG | 0.546353 | 1_3:+4914895 | Msa0098890:CDS |
| CTGCGCATCATAGAAGGGGC+TGG | 0.549088 | 1_3:+4907255 | Msa0098890:CDS |
| ATAAACTGCGCATCATAGAA+GGG | 0.549312 | 1_3:+4907250 | Msa0098890:CDS |
| TTGCTGGTATAAGCATTGAA+TGG | 0.551437 | 1_3:+4915396 | Msa0098890:CDS |
| GAGGAAGCTCGCCGCCGGGA+TGG | 0.553344 | 1_3:-4914965 | None:intergenic |
| AAATGGGCCAACCACCATCC+CGG | 0.554203 | 1_3:+4914951 | Msa0098890:CDS |
| GTCTGTAAGCGGATGGAGGG+TGG | 0.555473 | 1_3:-4915034 | None:intergenic |
| GTAAACAAGAAACCAACAAA+GGG | 0.556044 | 1_3:-4915733 | None:intergenic |
| TAATTGCGTGTCTTTCTGGA+AGG | 0.560208 | 1_3:+4904955 | Msa0098890:CDS |
| AGGAGAGGAAGCTCGCCGCC+GGG | 0.564363 | 1_3:-4914969 | None:intergenic |
| CAAGACTATTACAAGCAAGA+TGG | 0.565814 | 1_3:-4915442 | None:intergenic |
| AAGACACACAATTGTAAGGA+AGG | 0.570281 | 1_3:-4916051 | None:intergenic |
| TGTTTATGTTGGTCCACCGA+CGG | 0.571686 | 1_3:+4915850 | Msa0098890:CDS |
| CATCTCCAAAACTTTGCCAC+TGG | 0.575527 | 1_3:+4915056 | Msa0098890:CDS |
| TGGAGATGTCTGTAAGCGGA+TGG | 0.578065 | 1_3:-4915041 | None:intergenic |
| AAGTAGACACGATTTGGAAG+AGG | 0.578521 | 1_3:+4907366 | Msa0098890:intron |
| TATTCAGACTTTGAGGAATG+CGG | 0.578567 | 1_3:+4916096 | Msa0098890:CDS |
| TTGCACAGATCCTTAACCAA+AGG | 0.578750 | 1_3:-4904914 | None:intergenic |
| TTGCACAGATCCTTAACCAA+AGG | 0.580004 | 1_3:-4916019 | None:intergenic |
| GATGCATGGATCTCCATTGA+CGG | 0.586989 | 1_3:+4914909 | Msa0098890:CDS |
| TACTTACCATTCAGACGTTG+AGG | 0.590398 | 1_3:+4904984 | Msa0098890:CDS |
| AAGACACGCAATTATAAGGA+AGG | 0.591285 | 1_3:-4904946 | None:intergenic |
| CTTCCTCTCCTCAACCTCGC+CGG | 0.591399 | 1_3:+4914981 | Msa0098890:CDS |
| AACCAATCATGAGCCGTCGG+TGG | 0.594561 | 1_3:-4915863 | None:intergenic |
| AGCCTAGCAAAACACATCAC+AGG | 0.594917 | 1_3:-4915611 | None:intergenic |
| AAATTACACCGTGGAAGACG+CGG | 0.594958 | 1_3:-4915983 | None:intergenic |
| GAGGTAGCCGCGGAAACAGA+TGG | 0.597433 | 1_3:-4904868 | None:intergenic |
| CGGATGGAGGGTGGAAAGCG+AGG | 0.606786 | 1_3:-4915025 | None:intergenic |
| GATGTCTGTAAGCGGATGGA+GGG | 0.608266 | 1_3:-4915037 | None:intergenic |
| TTAGTGCACGTGCTTTCTGG+AGG | 0.608555 | 1_3:+4915257 | Msa0098890:CDS |
| GACTAGAACCGTGAATGGAA+AGG | 0.613325 | 1_3:-4907396 | None:intergenic |
| GGTAAACAAGAAACCAACAA+AGG | 0.615111 | 1_3:-4915734 | None:intergenic |
| GAATGCGGCTTTGCAGGCAA+GGG | 0.625318 | 1_3:+4916111 | Msa0098890:CDS |
| GGTCTTCTTTGGATTCAAAG+TGG | 0.627395 | 1_3:+4915287 | Msa0098890:CDS |
| TTGAACACCATCTGTTTCCG+CGG | 0.627778 | 1_3:+4904861 | Msa0098890:CDS |
| TCAAACCAATCATGAGCCGT+CGG | 0.628168 | 1_3:-4915866 | None:intergenic |
| CAGTGACATCTTGGCCGGCG+AGG | 0.636188 | 1_3:-4914995 | None:intergenic |
| AAACTCTAAAGCATCTTCTG+CGG | 0.642659 | 1_3:-4907211 | None:intergenic |
| TAAACTGCGCATCATAGAAG+GGG | 0.651146 | 1_3:+4907251 | Msa0098890:CDS |
| CTGGTATAAGCATTGAATGG+TGG | 0.657971 | 1_3:+4915399 | Msa0098890:CDS |
| TATCAAGGTTAATAATGACA+AGG | 0.658895 | 1_3:+4907329 | Msa0098890:CDS |
| AGATGTCTGTAAGCGGATGG+AGG | 0.661041 | 1_3:-4915038 | None:intergenic |
| AGACTACACCGAGGTAGCCG+CGG | 0.665511 | 1_3:-4904878 | None:intergenic |
| TGGATGGATTGGTTTCATGG+TGG | 0.679425 | 1_3:+4904824 | None:intergenic |
| TGGATGGATTGGTTTCATGG+TGG | 0.682579 | 1_3:+4915929 | Msa0098890:CDS |
| GTCACGTAGGTAACTGCCAG+TGG | 0.687851 | 1_3:-4915072 | None:intergenic |
| TGGCCGGCGAGGTTGAGGAG+AGG | 0.689110 | 1_3:-4914984 | None:intergenic |
| CAGAGACGACGTAGTCACGT+AGG | 0.725034 | 1_3:-4915085 | None:intergenic |
| TGGGCCAACCACCATCCCGG+CGG | 0.736027 | 1_3:+4914954 | Msa0098890:CDS |
| ATCTTCCTCAAATTACACCG+TGG | 0.747566 | 1_3:-4915992 | None:intergenic |
| ACTTTCCTTAGACTACACCG+AGG | 0.848048 | 1_3:-4904887 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATAAAATTTAATATT+TGG | - | chr1_3:4911181-4911200 | None:intergenic | 0.0% |
| !!! | AATAAAAAATTAAAATTTTA+AGG | + | chr1_3:4913230-4913249 | Msa0098890:intron | 0.0% |
| !! | AAAAATAAAAATAAATAAAA+TGG | + | chr1_3:4914646-4914665 | Msa0098890:intron | 0.0% |
| !!! | TTTTTGTTATTTTATAAAAC+AGG | - | chr1_3:4906003-4906022 | None:intergenic | 10.0% |
| !!! | TCATAAAATTTGAAATTAAA+CGG | + | chr1_3:4907098-4907117 | Msa0098890:intron | 10.0% |
| !! | TTAAAAAGAAAAATAAAAGA+AGG | + | chr1_3:4908263-4908282 | Msa0098890:intron | 10.0% |
| !! | ATAATTTACTTTAAATACTA+AGG | + | chr1_3:4909085-4909104 | Msa0098890:intron | 10.0% |
| !!! | TTCAAATTTCAAATTTTAAT+TGG | - | chr1_3:4909698-4909717 | None:intergenic | 10.0% |
| !!! | TTATTTAAAATATCCAAAAA+CGG | - | chr1_3:4909761-4909780 | None:intergenic | 10.0% |
| !!! | TCTTTTTTAAAAAAAAAACA+CGG | - | chr1_3:4910406-4910425 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAAAAAGACTTA+CGG | + | chr1_3:4910410-4910429 | Msa0098890:intron | 10.0% |
| !! | TAAATTTATACAAAAATCAA+TGG | - | chr1_3:4910655-4910674 | None:intergenic | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | + | chr1_3:4911596-4911615 | Msa0098890:intron | 10.0% |
| !!! | TTTTATCATTGTTTTTTTAA+TGG | + | chr1_3:4911985-4912004 | Msa0098890:intron | 10.0% |
| !! | TCTAAATATAAAAATATCAA+AGG | + | chr1_3:4912585-4912604 | Msa0098890:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr1_3:4912900-4912919 | Msa0098890:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr1_3:4912901-4912920 | Msa0098890:intron | 10.0% |
| !! | TTAAAAACAAATATATTTGA+AGG | - | chr1_3:4913528-4913547 | None:intergenic | 10.0% |
| !! | TAATCAATAAATTTAATGAT+GGG | - | chr1_3:4914135-4914154 | None:intergenic | 10.0% |
| !! | ATAATCAATAAATTTAATGA+TGG | - | chr1_3:4914136-4914155 | None:intergenic | 10.0% |
| !!! | AAAAATTACTTTTATTTTTG+GGG | - | chr1_3:4914610-4914629 | None:intergenic | 10.0% |
| !! | ATAAAAATAAATAAAATGGT+AGG | + | chr1_3:4914650-4914669 | Msa0098890:intron | 10.0% |
| !! | TAAAAATAAATAAAATGGTA+GGG | + | chr1_3:4914651-4914670 | Msa0098890:intron | 10.0% |
| !!! | TTTTATAATTGGAACTTATA+TGG | + | chr1_3:4905568-4905587 | Msa0098890:intron | 15.0% |
| !!! | ACTTCTATTTTTAATAAACT+TGG | + | chr1_3:4905876-4905895 | Msa0098890:intron | 15.0% |
| !! | TAATTACATATTTCTCATTA+TGG | - | chr1_3:4906166-4906185 | None:intergenic | 15.0% |
| !!! | CTCAAAATAAAATATTTTTG+AGG | - | chr1_3:4906393-4906412 | None:intergenic | 15.0% |
| !!! | TTACTTTTTGTTTATTTCAT+TGG | + | chr1_3:4906540-4906559 | Msa0098890:intron | 15.0% |
| !! | CACATTCTATTTAAAAAAAA+TGG | + | chr1_3:4908122-4908141 | Msa0098890:intron | 15.0% |
| !! | TTAAACAATTAAAACTTGAA+TGG | + | chr1_3:4908586-4908605 | Msa0098890:intron | 15.0% |
| !!! | AGTATTTTCTATAGATATAT+TGG | - | chr1_3:4908754-4908773 | None:intergenic | 15.0% |
| !! | TGATATATTTAACAATGATA+CGG | + | chr1_3:4909188-4909207 | Msa0098890:intron | 15.0% |
| !!! | TAAATTTAAATAACCGTTTT+TGG | + | chr1_3:4909745-4909764 | Msa0098890:intron | 15.0% |
| !! | AAAATAATAACTTCAAGAAA+GGG | + | chr1_3:4909926-4909945 | Msa0098890:intron | 15.0% |
| !! | TTAAAAAACTAAATCTTCAA+TGG | + | chr1_3:4910028-4910047 | Msa0098890:intron | 15.0% |
| !!! | ATGAACTGTTTTTAAAATAA+CGG | + | chr1_3:4910100-4910119 | Msa0098890:intron | 15.0% |
| !!! | TATTTTGTATTTTAGGATAA+TGG | + | chr1_3:4911046-4911065 | Msa0098890:intron | 15.0% |
| !! | CATTTATGTTATCTTAAAAA+CGG | - | chr1_3:4911779-4911798 | None:intergenic | 15.0% |
| !! | GTTATCTTAAAAAAAAAAGT+AGG | - | chr1_3:4912213-4912232 | None:intergenic | 15.0% |
| !!! | ATTGTTTTCAAATTTTAGAT+GGG | - | chr1_3:4912288-4912307 | None:intergenic | 15.0% |
| !!! | AATTGTTTTCAAATTTTAGA+TGG | - | chr1_3:4912289-4912308 | None:intergenic | 15.0% |
| !!! | TTTTAATGCACATATTTAAA+AGG | + | chr1_3:4912381-4912400 | Msa0098890:intron | 15.0% |
| !! | TCTCAAAATTTATAGAAATT+TGG | - | chr1_3:4912652-4912671 | None:intergenic | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | - | chr1_3:4912865-4912884 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr1_3:4912902-4912921 | Msa0098890:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr1_3:4912965-4912984 | Msa0098890:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr1_3:4912966-4912985 | Msa0098890:intron | 15.0% |
| !!! | TTTTTTATACAACTATTGAT+TGG | - | chr1_3:4913458-4913477 | None:intergenic | 15.0% |
| !!! | TTTCTATATCACTATTTTTT+TGG | - | chr1_3:4913595-4913614 | None:intergenic | 15.0% |
| !! | TGAATATTACCAAAAATAAA+AGG | + | chr1_3:4913618-4913637 | Msa0098890:intron | 15.0% |
| !! | TTATCTATACAAAACATTTA+AGG | + | chr1_3:4914317-4914336 | Msa0098890:intron | 15.0% |
| !! | AAAACATTTAAGGAATTTAA+AGG | + | chr1_3:4914327-4914346 | Msa0098890:intron | 15.0% |
| !!! | ACAGACAATACTTTTATAAT+TGG | + | chr1_3:4905557-4905576 | Msa0098890:intron | 20.0% |
| !! | GCATTCAATATTATAAAAAC+TGG | - | chr1_3:4905938-4905957 | None:intergenic | 20.0% |
| !! | ATGCATAAACAATTTAAACT+TGG | + | chr1_3:4905954-4905973 | Msa0098890:intron | 20.0% |
| !!! | TATGTAATTACGCAATTTTT+TGG | + | chr1_3:4906176-4906195 | Msa0098890:intron | 20.0% |
| !!! | TTTGAAACTGAATTTTGTAA+TGG | + | chr1_3:4906242-4906261 | Msa0098890:intron | 20.0% |
| !! | TATTGAGAGACTTTATTAAA+GGG | - | chr1_3:4906369-4906388 | None:intergenic | 20.0% |
| !! | ATATTGAGAGACTTTATTAA+AGG | - | chr1_3:4906370-4906389 | None:intergenic | 20.0% |
| !!! | AATATTTTATTTTGAGTGCA+TGG | + | chr1_3:4906397-4906416 | Msa0098890:intron | 20.0% |
| !!! | ATATTTTATTTTGAGTGCAT+GGG | + | chr1_3:4906398-4906417 | Msa0098890:intron | 20.0% |
| !! | ATCAATCCTTACAAATAAAA+AGG | + | chr1_3:4907453-4907472 | Msa0098890:intron | 20.0% |
| !! | CATATTTATCATACTAAAGT+AGG | - | chr1_3:4907872-4907891 | None:intergenic | 20.0% |
| !! | ATAAATATGTTACTAAAAGC+AGG | + | chr1_3:4907883-4907902 | Msa0098890:intron | 20.0% |
| !!! | TCTTTAAAAAAAATGTCAGT+AGG | + | chr1_3:4908899-4908918 | Msa0098890:intron | 20.0% |
| !!! | TTTTTTTTTTAAGGAGTGTT+TGG | - | chr1_3:4909246-4909265 | None:intergenic | 20.0% |
| !! | TTCTTGTCACTAATAAAAAA+CGG | - | chr1_3:4909784-4909803 | None:intergenic | 20.0% |
| !! | TGAATATAGAACAAAAAACT+AGG | + | chr1_3:4909883-4909902 | Msa0098890:intron | 20.0% |
| !! | GAAAATAATAACTTCAAGAA+AGG | + | chr1_3:4909925-4909944 | Msa0098890:intron | 20.0% |
| !!! | AGATTTAGTTTTTTAAACCT+GGG | - | chr1_3:4910024-4910043 | None:intergenic | 20.0% |
| !!! | AAGATTTAGTTTTTTAAACC+TGG | - | chr1_3:4910025-4910044 | None:intergenic | 20.0% |
| !!! | ATAACATATATTTGCTATCA+CGG | + | chr1_3:4910359-4910378 | Msa0098890:intron | 20.0% |
| !!! | ATTTGTTTAGTTCTAATTCT+GGG | + | chr1_3:4910500-4910519 | Msa0098890:intron | 20.0% |
| !! | AACTCAAAAAATGATTCTAA+AGG | + | chr1_3:4910527-4910546 | Msa0098890:intron | 20.0% |
| !!! | TGATTATCAAAATTGATTCT+AGG | - | chr1_3:4910743-4910762 | None:intergenic | 20.0% |
| !! | AACTCAAAAAAGAAAAAACA+AGG | - | chr1_3:4911025-4911044 | None:intergenic | 20.0% |
| !!! | TGAGTTCTATTTTGTATTTT+AGG | + | chr1_3:4911039-4911058 | Msa0098890:intron | 20.0% |
| !! | TACATTTCATTTATCTTTCT+TGG | + | chr1_3:4911332-4911351 | Msa0098890:intron | 20.0% |
| !!! | TTTTTGAAATTTTTCCGTAT+CGG | + | chr1_3:4911688-4911707 | Msa0098890:intron | 20.0% |
| !! | TACAGAATATACAAAACATT+CGG | + | chr1_3:4912044-4912063 | Msa0098890:intron | 20.0% |
| !! | TAGAGAGAAAATCTATTTAA+TGG | - | chr1_3:4912151-4912170 | None:intergenic | 20.0% |
| !!! | AAATAGATTTTCTCTCTAAA+TGG | + | chr1_3:4912153-4912172 | Msa0098890:intron | 20.0% |
| !!! | CAAATGTCAAATTGTTTTTT+TGG | - | chr1_3:4912325-4912344 | None:intergenic | 20.0% |
| !! | CAAAAAAACAATTTGACATT+TGG | + | chr1_3:4912323-4912342 | Msa0098890:intron | 20.0% |
| !! | ATATCAAAGGAAATACATTA+AGG | + | chr1_3:4912598-4912617 | Msa0098890:intron | 20.0% |
| !! | TATCAAAGGAAATACATTAA+GGG | + | chr1_3:4912599-4912618 | Msa0098890:intron | 20.0% |
| !!! | CTCTAAAATATAGTAATGTA+CGG | - | chr1_3:4912772-4912791 | None:intergenic | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | - | chr1_3:4912866-4912885 | None:intergenic | 20.0% |
| !! | GAAAATGGAATATATTGTAT+TGG | + | chr1_3:4912924-4912943 | Msa0098890:intron | 20.0% |
| !! | TATTGAAAATTGAAATGAGT+CGG | + | chr1_3:4913003-4913022 | Msa0098890:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr1_3:4913035-4913054 | Msa0098890:intron | 20.0% |
| !!! | TAATCATCAGATTTTATTAG+AGG | + | chr1_3:4913271-4913290 | Msa0098890:intron | 20.0% |
| !!! | GGAATTAGTTTTTTTTTTTG+AGG | + | chr1_3:4913292-4913311 | Msa0098890:intron | 20.0% |
| !!! | TTTTTTTTTTGAGGAATTAG+AGG | + | chr1_3:4913301-4913320 | Msa0098890:intron | 20.0% |
| !! | CAATTTAGAAAATAGTTGAA+AGG | + | chr1_3:4913336-4913355 | Msa0098890:intron | 20.0% |
| !! | TATCACTATTTAATATCTGA+AGG | - | chr1_3:4913559-4913578 | None:intergenic | 20.0% |
| !!! | CAATTATTGCCTTTTATTTT+TGG | - | chr1_3:4913630-4913649 | None:intergenic | 20.0% |
| !!! | ATTTTCGAAACAATAATGAT+AGG | + | chr1_3:4913707-4913726 | Msa0098890:intron | 20.0% |
| !!! | TTTTCGAAACAATAATGATA+GGG | + | chr1_3:4913708-4913727 | Msa0098890:intron | 20.0% |
| !!! | TTTCTCATTTTCAAAGTAAA+AGG | + | chr1_3:4914229-4914248 | Msa0098890:intron | 20.0% |
| !!! | TTCTCATTTTCAAAGTAAAA+GGG | + | chr1_3:4914230-4914249 | Msa0098890:intron | 20.0% |
| !! | TATTAATATTAGTAGTTTCC+AGG | - | chr1_3:4914372-4914391 | None:intergenic | 20.0% |
| !!! | AATGATTTTGTGAATACATT+AGG | - | chr1_3:4914706-4914725 | None:intergenic | 20.0% |
| !! | AAAGAACATAACAGAAATTA+TGG | - | chr1_3:4915201-4915220 | None:intergenic | 20.0% |
| !!! | GTTTACTTTGAATCATTTTT+CGG | + | chr1_3:4915823-4915842 | Msa0098890:CDS | 20.0% |
| ! | CAAATTAAATTTCTCGGAAT+CGG | - | chr1_3:4905043-4905062 | None:intergenic | 25.0% |
| !! | GATTCCGAGAAATTTAATTT+GGG | + | chr1_3:4905042-4905061 | Msa0098890:CDS | 25.0% |
| !! | TCCTAATATTTTTCTGTCAT+TGG | + | chr1_3:4905107-4905126 | Msa0098890:intron | 25.0% |
| ! | TATAATTGGAACTTATATGG+TGG | + | chr1_3:4905571-4905590 | Msa0098890:intron | 25.0% |
| ! | AGATGCGAAATTTATTTAGT+AGG | - | chr1_3:4905618-4905637 | None:intergenic | 25.0% |
| !!! | AACTGATTTGTGATAAGATT+TGG | - | chr1_3:4905753-4905772 | None:intergenic | 25.0% |
| !! | CGAATGTTATTTGAAATCTA+TGG | - | chr1_3:4905841-4905860 | None:intergenic | 25.0% |
| ! | CATAAACAATTTAAACTTGG+AGG | + | chr1_3:4905957-4905976 | Msa0098890:intron | 25.0% |
| ! | AACTCATTATATTGTCTTCT+AGG | + | chr1_3:4906062-4906081 | Msa0098890:intron | 25.0% |
| ! | ACTCATTATATTGTCTTCTA+GGG | + | chr1_3:4906063-4906082 | Msa0098890:intron | 25.0% |
| ! | ACTTATAAGGGATATTTCAA+TGG | + | chr1_3:4906277-4906296 | Msa0098890:intron | 25.0% |
| ! | TCAAAATCTGTTACATTATG+AGG | - | chr1_3:4906324-4906343 | None:intergenic | 25.0% |
| ! | TAATGTTTGTCAGATATATC+TGG | + | chr1_3:4906653-4906672 | Msa0098890:intron | 25.0% |
| !! | TTGACAAATACCTTTTCTTA+TGG | + | chr1_3:4906961-4906980 | Msa0098890:intron | 25.0% |
| !! | AAATACCTTTTCTTATGGTA+GGG | + | chr1_3:4906966-4906985 | Msa0098890:intron | 25.0% |
| !!! | GATGGATTATAGTATTTAGA+CGG | - | chr1_3:4907010-4907029 | None:intergenic | 25.0% |
| ! | ACTTGATATATACTGAAACA+GGG | + | chr1_3:4907153-4907172 | Msa0098890:intron | 25.0% |
| ! | TATCAAGGTTAATAATGACA+AGG | + | chr1_3:4907329-4907348 | Msa0098890:CDS | 25.0% |
| ! | TGTAAGGATTGATTAAAATG+AGG | - | chr1_3:4907446-4907465 | None:intergenic | 25.0% |
| !!! | GTATGTCCTTTTTATTTGTA+AGG | - | chr1_3:4907462-4907481 | None:intergenic | 25.0% |
| ! | AACAGACAATGTACAATTAT+TGG | - | chr1_3:4907503-4907522 | None:intergenic | 25.0% |
| !! | TTTTATCAATAATGCTGTCT+TGG | - | chr1_3:4907826-4907845 | None:intergenic | 25.0% |
| ! | TCATTATACCATAACACATA+AGG | + | chr1_3:4908294-4908313 | Msa0098890:intron | 25.0% |
| ! | TGAGTGAAGTTAAAATTGTA+CGG | + | chr1_3:4908442-4908461 | Msa0098890:intron | 25.0% |
| ! | TTAAAATGAGTTACTCCATT+TGG | - | chr1_3:4908570-4908589 | None:intergenic | 25.0% |
| !! | TCTTTCTATTCATCAAGTTT+TGG | - | chr1_3:4908612-4908631 | None:intergenic | 25.0% |
| ! | TTTGAACCATTTCAACATTT+CGG | - | chr1_3:4909575-4909594 | None:intergenic | 25.0% |
| !! | CAATTTTTACACCACAAAAA+TGG | + | chr1_3:4909967-4909986 | Msa0098890:intron | 25.0% |
| !!! | CTGTTTTTAAAATAACGGTT+CGG | + | chr1_3:4910105-4910124 | Msa0098890:intron | 25.0% |
| ! | AATTAACTGAACCATTACAT+TGG | - | chr1_3:4910139-4910158 | None:intergenic | 25.0% |
| !!! | TGGTTCAGTTAATTTTAGTT+TGG | + | chr1_3:4910145-4910164 | Msa0098890:intron | 25.0% |
| !!! | CAGTTAATTTTAGTTTGGTT+TGG | + | chr1_3:4910150-4910169 | Msa0098890:intron | 25.0% |
| !!! | AATTTTAGTTTGGTTTGGTT+CGG | + | chr1_3:4910155-4910174 | Msa0098890:intron | 25.0% |
| ! | AAATTTGGAAACGTTTCTTT+AGG | - | chr1_3:4910226-4910245 | None:intergenic | 25.0% |
| ! | ATAAGCAAACATTGGAAATT+TGG | - | chr1_3:4910241-4910260 | None:intergenic | 25.0% |
| !!! | CATTTGTTTAGTTCTAATTC+TGG | + | chr1_3:4910499-4910518 | Msa0098890:intron | 25.0% |
| ! | TTTGTGAAAATGTGGATTTA+AGG | - | chr1_3:4910679-4910698 | None:intergenic | 25.0% |
| ! | TAGATGTATTTGTGAAAATG+TGG | - | chr1_3:4910687-4910706 | None:intergenic | 25.0% |
| ! | TCAAAAAAGAAAAAACAAGG+AGG | - | chr1_3:4911022-4911041 | None:intergenic | 25.0% |
| ! | TTTAATATTTGGATACTCTC+CGG | - | chr1_3:4911170-4911189 | None:intergenic | 25.0% |
| !! | TTTCCCTTTCTAAGAAATTA+GGG | + | chr1_3:4911396-4911415 | Msa0098890:intron | 25.0% |
| ! | AAACCCTAATTTCTTAGAAA+GGG | - | chr1_3:4911402-4911421 | None:intergenic | 25.0% |
| ! | AATATTGACGATTAAGAGAA+TGG | - | chr1_3:4911525-4911544 | None:intergenic | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | - | chr1_3:4911675-4911694 | None:intergenic | 25.0% |
| ! | TGTTATCTTAAAAACGGAAT+TGG | - | chr1_3:4911773-4911792 | None:intergenic | 25.0% |
| ! | TAACCAAATGATTTATCTGT+GGG | - | chr1_3:4912116-4912135 | None:intergenic | 25.0% |
| ! | TACGAGTTTAGATAGTTAAT+GGG | - | chr1_3:4912353-4912372 | None:intergenic | 25.0% |
| ! | ATACGAGTTTAGATAGTTAA+TGG | - | chr1_3:4912354-4912373 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | + | chr1_3:4912909-4912928 | Msa0098890:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr1_3:4913034-4913053 | Msa0098890:intron | 25.0% |
| !!! | TTTTTTAGCAAAGACATTGA+TGG | + | chr1_3:4913144-4913163 | Msa0098890:intron | 25.0% |
| ! | TCCTTGACTCAAATAATTAT+CGG | - | chr1_3:4913376-4913395 | None:intergenic | 25.0% |
| ! | TCATTAATGAGATTCAACTA+AGG | - | chr1_3:4913428-4913447 | None:intergenic | 25.0% |
| ! | TTTCGAAACAATAATGATAG+GGG | + | chr1_3:4913709-4913728 | Msa0098890:intron | 25.0% |
| ! | CCTTCAAAAAAAAAATGAGA+GGG | + | chr1_3:4913732-4913751 | Msa0098890:intron | 25.0% |
| ! | TTCTGATATTCTAATGAATG+TGG | - | chr1_3:4913815-4913834 | None:intergenic | 25.0% |
| ! | AAGACTACATACATCATTTA+AGG | - | chr1_3:4914006-4914025 | None:intergenic | 25.0% |
| ! | AAATGAGAAACTAATGATTG+TGG | - | chr1_3:4914219-4914238 | None:intergenic | 25.0% |
| !!! | GAAAGAACCATATTTTTACT+TGG | - | chr1_3:4914295-4914314 | None:intergenic | 25.0% |
| !! | AATTTAAAGGCGAAGATTTT+GGG | + | chr1_3:4914340-4914359 | Msa0098890:intron | 25.0% |
| !! | ATTTTGTGAATACATTAGGT+GGG | - | chr1_3:4914702-4914721 | None:intergenic | 25.0% |
| ! | AGAATGAATGAATGAAAGAA+GGG | - | chr1_3:4914788-4914807 | None:intergenic | 25.0% |
| ! | AAGAATGAATGAATGAAAGA+AGG | - | chr1_3:4914789-4914808 | None:intergenic | 25.0% |
| ! | AAGTTCTTGTAATGAAATGT+AGG | - | chr1_3:4914868-4914887 | None:intergenic | 25.0% |
| !!! | TGAATTTTGATTCTTTTGCT+AGG | + | chr1_3:4915555-4915574 | Msa0098890:CDS | 25.0% |
| ! | AAAAGTTCCATCTTTCTATT+AGG | - | chr1_3:4915686-4915705 | None:intergenic | 25.0% |
| !! | AATAGAAAGATGGAACTTTT+AGG | + | chr1_3:4915686-4915705 | Msa0098890:CDS | 25.0% |
| !! | ATAGAAAGATGGAACTTTTA+GGG | + | chr1_3:4915687-4915706 | Msa0098890:CDS | 25.0% |
| CGATTCCGAGAAATTTAATT+TGG | + | chr1_3:4905041-4905060 | Msa0098890:CDS | 30.0% | |
| GCTTCCCAAATTAAATTTCT+CGG | - | chr1_3:4905049-4905068 | None:intergenic | 30.0% | |
| GCCAATGACAGAAAAATATT+AGG | - | chr1_3:4905111-4905130 | None:intergenic | 30.0% | |
| ! | TTTTTCTGTCATTGGCATTT+TGG | + | chr1_3:4905115-4905134 | Msa0098890:intron | 30.0% |
| !! | ATTGGCATTTTGGTAATCAT+TGG | + | chr1_3:4905125-4905144 | Msa0098890:intron | 30.0% |
| TTTCTTACCTATCTCTTGAA+AGG | - | chr1_3:4905196-4905215 | None:intergenic | 30.0% | |
| AAGAAAGAAACTACTGATAC+TGG | + | chr1_3:4905210-4905229 | Msa0098890:intron | 30.0% | |
| TAACAATTTGTGTTATGCCT+TGG | + | chr1_3:4905356-4905375 | Msa0098890:intron | 30.0% | |
| !!! | GTTTTTTTCTTTCCATTTCC+TGG | + | chr1_3:4905447-4905466 | Msa0098890:intron | 30.0% |
| AATAACATTCGTTCCATTCA+TGG | + | chr1_3:4905850-4905869 | Msa0098890:intron | 30.0% | |
| AAATAGAAGTAAGCCATGAA+TGG | - | chr1_3:4905866-4905885 | None:intergenic | 30.0% | |
| ACAATTTAAACTTGGAGGTA+AGG | + | chr1_3:4905962-4905981 | Msa0098890:intron | 30.0% | |
| TTGGAGGTAAGGTAATATAA+GGG | + | chr1_3:4905973-4905992 | Msa0098890:intron | 30.0% | |
| !!! | CAATTTTTTGGTCGTAGTAA+AGG | + | chr1_3:4906188-4906207 | Msa0098890:intron | 30.0% |
| ACTGAACAGACAACTTATAA+GGG | + | chr1_3:4906265-4906284 | Msa0098890:intron | 30.0% | |
| !!! | TTTTTTGCTGAGAAGAACTA+TGG | + | chr1_3:4906493-4906512 | Msa0098890:intron | 30.0% |
| !!! | TGGGTGAATTGTTTTTACAA+AGG | + | chr1_3:4906711-4906730 | Msa0098890:intron | 30.0% |
| TGTCTATCATCTATCATTTG+TGG | + | chr1_3:4906797-4906816 | Msa0098890:intron | 30.0% | |
| TTACACAAATCAGCATATCT+TGG | + | chr1_3:4906821-4906840 | Msa0098890:intron | 30.0% | |
| ! | CAAATACCTTTTCTTATGGT+AGG | + | chr1_3:4906965-4906984 | Msa0098890:intron | 30.0% |
| CACTTGATATATACTGAAAC+AGG | + | chr1_3:4907152-4907171 | Msa0098890:intron | 30.0% | |
| CTTAGTTGTGGAATTTATCA+AGG | + | chr1_3:4907314-4907333 | Msa0098890:CDS | 30.0% | |
| ! | TTAATGTCAGATTGATAACC+TGG | - | chr1_3:4907612-4907631 | None:intergenic | 30.0% |
| ! | GTAGGTCTCATAATATTTTC+TGG | - | chr1_3:4907854-4907873 | None:intergenic | 30.0% |
| AATATGTTACTAAAAGCAGG+AGG | + | chr1_3:4907886-4907905 | Msa0098890:intron | 30.0% | |
| ATATGTTACTAAAAGCAGGA+GGG | + | chr1_3:4907887-4907906 | Msa0098890:intron | 30.0% | |
| TCCTAGATACTAAAAACTTG+AGG | + | chr1_3:4907929-4907948 | Msa0098890:intron | 30.0% | |
| CCTAGATACTAAAAACTTGA+GGG | + | chr1_3:4907930-4907949 | Msa0098890:intron | 30.0% | |
| CTAGATACTAAAAACTTGAG+GGG | + | chr1_3:4907931-4907950 | Msa0098890:intron | 30.0% | |
| !!! | ATCAAGTGATGTGTTTTTAG+AGG | + | chr1_3:4907978-4907997 | Msa0098890:intron | 30.0% |
| !!! | TCAAGTGATGTGTTTTTAGA+GGG | + | chr1_3:4907979-4907998 | Msa0098890:intron | 30.0% |
| !! | TTTGTTGTTACAAAGTTGAG+AGG | + | chr1_3:4908042-4908061 | Msa0098890:intron | 30.0% |
| ATAGAATGTGCAAAATTCTG+TGG | - | chr1_3:4908112-4908131 | None:intergenic | 30.0% | |
| GTTGTGAATGAAATGAGTTA+AGG | + | chr1_3:4908370-4908389 | Msa0098890:intron | 30.0% | |
| TGAATGAAATGAGTTAAGGA+TGG | + | chr1_3:4908374-4908393 | Msa0098890:intron | 30.0% | |
| GAATGAAATGAGTTAAGGAT+GGG | + | chr1_3:4908375-4908394 | Msa0098890:intron | 30.0% | |
| AATGAAATGAGTTAAGGATG+GGG | + | chr1_3:4908376-4908395 | Msa0098890:intron | 30.0% | |
| AAAATTGTACGGAAAGAGAA+AGG | + | chr1_3:4908453-4908472 | Msa0098890:intron | 30.0% | |
| TAATATGAGAGAAGTGAATG+TGG | + | chr1_3:4908490-4908509 | Msa0098890:intron | 30.0% | |
| CTTCTTTCTAATTCTCCAAA+TGG | + | chr1_3:4908552-4908571 | Msa0098890:intron | 30.0% | |
| TAGACATAAGCATCTTCATA+TGG | + | chr1_3:4909311-4909330 | Msa0098890:intron | 30.0% | |
| TGAGCAACATAAAGTTAGAA+GGG | - | chr1_3:4909488-4909507 | None:intergenic | 30.0% | |
| TTGAGCAACATAAAGTTAGA+AGG | - | chr1_3:4909489-4909508 | None:intergenic | 30.0% | |
| TCAATATGTGCAAGAAACTT+AGG | + | chr1_3:4909505-4909524 | Msa0098890:intron | 30.0% | |
| CAATATGTGCAAGAAACTTA+GGG | + | chr1_3:4909506-4909525 | Msa0098890:intron | 30.0% | |
| AATATGTGCAAGAAACTTAG+GGG | + | chr1_3:4909507-4909526 | Msa0098890:intron | 30.0% | |
| TTCAACATTTCGGTTCAATT+CGG | - | chr1_3:4909565-4909584 | None:intergenic | 30.0% | |
| ATTGAACCGAAATGTTGAAA+TGG | + | chr1_3:4909566-4909585 | Msa0098890:intron | 30.0% | |
| TAATCAAACCGAACCATTTA+AGG | + | chr1_3:4909596-4909615 | Msa0098890:intron | 30.0% | |
| ATGGTTCAGTTAATTGAGTT+TGG | + | chr1_3:4910047-4910066 | Msa0098890:intron | 30.0% | |
| TCAGTTAATTGAGTTTGGTT+CGG | + | chr1_3:4910052-4910071 | Msa0098890:intron | 30.0% | |
| TGTGCATTATAAGCAAACAT+TGG | - | chr1_3:4910249-4910268 | None:intergenic | 30.0% | |
| TTGCTTATAATGCACAATCT+TGG | + | chr1_3:4910253-4910272 | Msa0098890:intron | 30.0% | |
| ATAGTGAATATGCTAGAACA+TGG | - | chr1_3:4910462-4910481 | None:intergenic | 30.0% | |
| ! | ATTGTTCGCTGTCATAATTT+TGG | + | chr1_3:4910959-4910978 | Msa0098890:intron | 30.0% |
| ATGTAGTTTAAAGGTAAGAG+AGG | - | chr1_3:4910992-4911011 | None:intergenic | 30.0% | |
| GGTAACAACATGTAGTTTAA+AGG | - | chr1_3:4911001-4911020 | None:intergenic | 30.0% | |
| ! | CTTTCCCTTTCTAAGAAATT+AGG | + | chr1_3:4911395-4911414 | Msa0098890:intron | 30.0% |
| GAAACCCTAATTTCTTAGAA+AGG | - | chr1_3:4911403-4911422 | None:intergenic | 30.0% | |
| !! | TTCAACTTTTTCTTCCAAAG+TGG | + | chr1_3:4911420-4911439 | Msa0098890:intron | 30.0% |
| ATTAACAAACACAAGAAACC+AGG | - | chr1_3:4911576-4911595 | None:intergenic | 30.0% | |
| ! | TTAAAAACGGAATTGGTGAT+AGG | - | chr1_3:4911766-4911785 | None:intergenic | 30.0% |
| TGATTTATCTGTGGGAATTA+GGG | - | chr1_3:4912108-4912127 | None:intergenic | 30.0% | |
| ATGATTTATCTGTGGGAATT+AGG | - | chr1_3:4912109-4912128 | None:intergenic | 30.0% | |
| ATTCCCACAGATAAATCATT+TGG | + | chr1_3:4912110-4912129 | Msa0098890:intron | 30.0% | |
| CTAACCAAATGATTTATCTG+TGG | - | chr1_3:4912117-4912136 | None:intergenic | 30.0% | |
| CACAGATAAATCATTTGGTT+AGG | + | chr1_3:4912115-4912134 | Msa0098890:intron | 30.0% | |
| TTTGTGACTTACCTTTCAAA+TGG | - | chr1_3:4912179-4912198 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | - | chr1_3:4912861-4912880 | None:intergenic | 30.0% | |
| ! | TTGAAATGAGTCGGTTATTT+TGG | + | chr1_3:4913012-4913031 | Msa0098890:intron | 30.0% |
| !! | TGAAATGAGTCGGTTATTTT+GGG | + | chr1_3:4913013-4913032 | Msa0098890:intron | 30.0% |
| ACCGATAATTATTTGAGTCA+AGG | + | chr1_3:4913372-4913391 | Msa0098890:intron | 30.0% | |
| GCCTTCAAAAAAAAAATGAG+AGG | + | chr1_3:4913731-4913750 | Msa0098890:intron | 30.0% | |
| !!! | CCCTCTCATTTTTTTTTTGA+AGG | - | chr1_3:4913735-4913754 | None:intergenic | 30.0% |
| TTACATAAATATACACCCTC+CGG | + | chr1_3:4913942-4913961 | Msa0098890:intron | 30.0% | |
| ! | CTTTTGCTTATATTAGTGAC+CGG | - | chr1_3:4914073-4914092 | None:intergenic | 30.0% |
| ! | CTTTTGCTTATATTAGTGAC+CGG | + | chr1_3:4914073-4914092 | Msa0098890:intron | 30.0% |
| ACACATGCCAAGTAAAAATA+TGG | + | chr1_3:4914285-4914304 | Msa0098890:intron | 30.0% | |
| ! | GAATTTAAAGGCGAAGATTT+TGG | + | chr1_3:4914339-4914358 | Msa0098890:intron | 30.0% |
| ! | TTTTGTGAATACATTAGGTG+GGG | - | chr1_3:4914701-4914720 | None:intergenic | 30.0% |
| ! | GATTTTGTGAATACATTAGG+TGG | - | chr1_3:4914703-4914722 | None:intergenic | 30.0% |
| !!! | TTGAGTTGTTTTTGTAGAGA+GGG | - | chr1_3:4914744-4914763 | None:intergenic | 30.0% |
| !!! | TTTGAGTTGTTTTTGTAGAG+AGG | - | chr1_3:4914745-4914764 | None:intergenic | 30.0% |
| TCTTGTAATGAAATGTAGGT+TGG | - | chr1_3:4914864-4914883 | None:intergenic | 30.0% | |
| ATGTTCTTTGTCAGTGTTTA+TGG | + | chr1_3:4915212-4915231 | Msa0098890:CDS | 30.0% | |
| ATTATCAGGTTATGGTTAAC+CGG | + | chr1_3:4915333-4915352 | Msa0098890:CDS | 30.0% | |
| AATGGTAAATGTTGAAGATC+AGG | - | chr1_3:4915476-4915495 | None:intergenic | 30.0% | |
| TTCGACGAAACAACAAAAAA+TGG | - | chr1_3:4915494-4915513 | None:intergenic | 30.0% | |
| !!! | TCGCTTACTTCTTGTTTTTA+TGG | + | chr1_3:4915524-4915543 | Msa0098890:CDS | 30.0% |
| !! | AAAAGTGCCTAATAGAAAGA+TGG | + | chr1_3:4915676-4915695 | Msa0098890:CDS | 30.0% |
| GTAAACAAGAAACCAACAAA+GGG | - | chr1_3:4915736-4915755 | None:intergenic | 30.0% | |
| ! | TGGTTTCTTGTTTACCTAAT+TGG | + | chr1_3:4915741-4915760 | Msa0098890:CDS | 30.0% |
| ! | GGTTTCTTGTTTACCTAATT+GGG | + | chr1_3:4915742-4915761 | Msa0098890:CDS | 30.0% |
| ! | GTTTCTTGTTTACCTAATTG+GGG | + | chr1_3:4915743-4915762 | Msa0098890:CDS | 30.0% |
| AAGACACGCAATTATAAGGA+AGG | - | chr1_3:4904949-4904968 | None:intergenic | 35.0% | |
| CAGAAAGACACGCAATTATA+AGG | - | chr1_3:4904953-4904972 | None:intergenic | 35.0% | |
| CTTATAATTGCGTGTCTTTC+TGG | + | chr1_3:4904951-4904970 | Msa0098890:CDS | 35.0% | |
| !! | TTTGGTAATCATTGGCTTTG+AGG | + | chr1_3:4905133-4905152 | Msa0098890:intron | 35.0% |
| GTGATTTCCTTTCAAGAGAT+AGG | + | chr1_3:4905186-4905205 | Msa0098890:intron | 35.0% | |
| TCATCTTCATTGTTGAAGTG+TGG | + | chr1_3:4905266-4905285 | Msa0098890:intron | 35.0% | |
| CATCTTCATTGTTGAAGTGT+GGG | + | chr1_3:4905267-4905286 | Msa0098890:intron | 35.0% | |
| TGCTGAAATATCATGCTTCT+AGG | + | chr1_3:4905528-4905547 | Msa0098890:intron | 35.0% | |
| TAAACTGATGAAGCCTCATT+CGG | + | chr1_3:4905902-4905921 | Msa0098890:intron | 35.0% | |
| CTTGGAGGTAAGGTAATATA+AGG | + | chr1_3:4905972-4905991 | Msa0098890:intron | 35.0% | |
| GACTGAACAGACAACTTATA+AGG | + | chr1_3:4906264-4906283 | Msa0098890:intron | 35.0% | |
| AGACTTTATTAAAGGGAAGG+TGG | - | chr1_3:4906362-4906381 | None:intergenic | 35.0% | |
| GAGAGACTTTATTAAAGGGA+AGG | - | chr1_3:4906365-4906384 | None:intergenic | 35.0% | |
| GACTGTATGTCTTATAGACT+CGG | + | chr1_3:4906436-4906455 | Msa0098890:intron | 35.0% | |
| ! | GACTCGGTATAATTATCACA+AGG | + | chr1_3:4906452-4906471 | Msa0098890:intron | 35.0% |
| AAAGCATGTGATGGTATTGT+TGG | + | chr1_3:4906565-4906584 | Msa0098890:intron | 35.0% | |
| TATTGACATGTCTCGAGTAT+TGG | + | chr1_3:4906597-4906616 | Msa0098890:intron | 35.0% | |
| ATTGACATGTCTCGAGTATT+GGG | + | chr1_3:4906598-4906617 | Msa0098890:intron | 35.0% | |
| ATCTTCCCTACCATAAGAAA+AGG | - | chr1_3:4906974-4906993 | None:intergenic | 35.0% | |
| GTAGGGAAGATTACGTATAA+TGG | + | chr1_3:4906983-4907002 | Msa0098890:intron | 35.0% | |
| AATTACAGGGATTGATAAGC+AGG | - | chr1_3:4907036-4907055 | None:intergenic | 35.0% | |
| TTATCAATCCCTGTAATTGC+TGG | + | chr1_3:4907038-4907057 | Msa0098890:intron | 35.0% | |
| !! | AAACTCTAAAGCATCTTCTG+CGG | - | chr1_3:4907214-4907233 | None:intergenic | 35.0% |
| ATAAACTGCGCATCATAGAA+GGG | + | chr1_3:4907250-4907269 | Msa0098890:CDS | 35.0% | |
| TGAATTGACAAGCTTAGTTG+TGG | + | chr1_3:4907302-4907321 | Msa0098890:CDS | 35.0% | |
| GAGATAAACCTTTCCATTCA+CGG | + | chr1_3:4907388-4907407 | Msa0098890:CDS | 35.0% | |
| ATGAGAAGCTAGGACAATAT+TGG | - | chr1_3:4907538-4907557 | None:intergenic | 35.0% | |
| AGGTTCAATAATGAGAAGCT+AGG | - | chr1_3:4907548-4907567 | None:intergenic | 35.0% | |
| !!! | CCAAGATCAATTGTTTTGGT+AGG | - | chr1_3:4907767-4907786 | None:intergenic | 35.0% |
| CCTACCAAAACAATTGATCT+TGG | + | chr1_3:4907764-4907783 | Msa0098890:intron | 35.0% | |
| ! | GCTTCCAAGATCAATTGTTT+TGG | - | chr1_3:4907771-4907790 | None:intergenic | 35.0% |
| AACAATTGATCTTGGAAGCA+AGG | + | chr1_3:4907772-4907791 | Msa0098890:intron | 35.0% | |
| TATGTTACTAAAAGCAGGAG+GGG | + | chr1_3:4907888-4907907 | Msa0098890:intron | 35.0% | |
| !!! | CCCTCAAGTTTTTAGTATCT+AGG | - | chr1_3:4907933-4907952 | None:intergenic | 35.0% |
| !!! | CAAGTGATGTGTTTTTAGAG+GGG | + | chr1_3:4907980-4907999 | Msa0098890:intron | 35.0% |
| ACAGTCAGCTTTCAATCTAA+GGG | - | chr1_3:4908018-4908037 | None:intergenic | 35.0% | |
| AACAGTCAGCTTTCAATCTA+AGG | - | chr1_3:4908019-4908038 | None:intergenic | 35.0% | |
| !!! | TCACTTTTTGTGGCAGTATT+AGG | + | chr1_3:4908326-4908345 | Msa0098890:intron | 35.0% |
| !! | CACTTTTTGTGGCAGTATTA+GGG | + | chr1_3:4908327-4908346 | Msa0098890:intron | 35.0% |
| GGCAAAATGTGAAGCTAAAA+AGG | + | chr1_3:4908397-4908416 | Msa0098890:intron | 35.0% | |
| AGACAAAGAGAGCAACATAT+AGG | - | chr1_3:4908647-4908666 | None:intergenic | 35.0% | |
| CAAGATCCAAACAAAAAGTG+AGG | + | chr1_3:4909272-4909291 | Msa0098890:intron | 35.0% | |
| ! | TACACTTTTGTCGTGATACT+AGG | + | chr1_3:4909347-4909366 | Msa0098890:intron | 35.0% |
| ! | AACGGATTCAACTTTCTGTT+GGG | + | chr1_3:4909374-4909393 | Msa0098890:intron | 35.0% |
| GAGCAACATAAAGTTAGAAG+GGG | - | chr1_3:4909487-4909506 | None:intergenic | 35.0% | |
| !! | TCAATTCGGTTCGGTTAATA+TGG | - | chr1_3:4909551-4909570 | None:intergenic | 35.0% |
| ! | AAACCGAACCATTTAAGGTT+TGG | + | chr1_3:4909601-4909620 | Msa0098890:intron | 35.0% |
| GTTCCAAACCTTAAATGGTT+CGG | - | chr1_3:4909607-4909626 | None:intergenic | 35.0% | |
| ! | GGTTAGTTCCAAACCTTAAA+TGG | - | chr1_3:4909612-4909631 | None:intergenic | 35.0% |
| ! | ACCATACATTTGGTTCAGTT+CGG | - | chr1_3:4909633-4909652 | None:intergenic | 35.0% |
| ACTGAACCAAATGTATGGTT+CGG | + | chr1_3:4909634-4909653 | Msa0098890:intron | 35.0% | |
| TCGGTTAATAGCCAAACAAA+CGG | - | chr1_3:4909664-4909683 | None:intergenic | 35.0% | |
| !! | TTAATTGGTTCGCTTCGATT+CGG | - | chr1_3:4909683-4909702 | None:intergenic | 35.0% |
| !!! | TTATGCTCATGCCATTTTTG+TGG | - | chr1_3:4909981-4910000 | None:intergenic | 35.0% |
| !! | TAATTGAGTTTGGTTCGGTT+CGG | + | chr1_3:4910057-4910076 | Msa0098890:intron | 35.0% |
| AGTTCATTAACTGAACCGAA+CGG | - | chr1_3:4910087-4910106 | None:intergenic | 35.0% | |
| CGGTTCAATAACCAATGTAA+TGG | + | chr1_3:4910125-4910144 | Msa0098890:intron | 35.0% | |
| CTTATAATGCACAATCTTGG+TGG | + | chr1_3:4910256-4910275 | Msa0098890:intron | 35.0% | |
| ! | GTTGTCTCTGAAGAAGATAA+GGG | - | chr1_3:4910817-4910836 | None:intergenic | 35.0% |
| ! | AGTTGTCTCTGAAGAAGATA+AGG | - | chr1_3:4910818-4910837 | None:intergenic | 35.0% |
| !!! | CGTCATCCATTTTGAAGTAT+CGG | - | chr1_3:4911090-4911109 | None:intergenic | 35.0% |
| GAAAGATGCAATTGTTTGTG+TGG | - | chr1_3:4911380-4911399 | None:intergenic | 35.0% | |
| TCTCTAAATGGCCATTTGAA+AGG | + | chr1_3:4912165-4912184 | Msa0098890:intron | 35.0% | |
| AGGTAAGTCACAAAAATGTG+AGG | + | chr1_3:4912185-4912204 | Msa0098890:intron | 35.0% | |
| AAACAATTACCTCGAGGATT+GGG | - | chr1_3:4912692-4912711 | None:intergenic | 35.0% | |
| TAAACAATTACCTCGAGGAT+TGG | - | chr1_3:4912693-4912712 | None:intergenic | 35.0% | |
| AGTAGTAAACAATTACCTCG+AGG | - | chr1_3:4912698-4912717 | None:intergenic | 35.0% | |
| !! | CTCTTCAACTTTGAGGTATT+TGG | - | chr1_3:4914467-4914486 | None:intergenic | 35.0% |
| AGTTTGTCTCTTCAACTTTG+AGG | - | chr1_3:4914474-4914493 | None:intergenic | 35.0% | |
| TAACTCGATTGATGAGCTAA+AGG | - | chr1_3:4914527-4914546 | None:intergenic | 35.0% | |
| !!! | ATGTAGGTTGGTTTTAGCAA+CGG | - | chr1_3:4914852-4914871 | None:intergenic | 35.0% |
| AGATCTACGACGTTTCAAAA+TGG | + | chr1_3:4914934-4914953 | Msa0098890:CDS | 35.0% | |
| GATCTACGACGTTTCAAAAT+GGG | + | chr1_3:4914935-4914954 | Msa0098890:CDS | 35.0% | |
| ! | TTTGGTTAGTTCGGAGAAAA+GGG | - | chr1_3:4915132-4915151 | None:intergenic | 35.0% |
| TTGTTCGAAGAAAAAGGACA+CGG | + | chr1_3:4915158-4915177 | Msa0098890:CDS | 35.0% | |
| TTCTTTGGATTCAAAGTGGT+TGG | + | chr1_3:4915291-4915310 | Msa0098890:CDS | 35.0% | |
| TCATGATTCTGGTCATTATC+AGG | + | chr1_3:4915319-4915338 | Msa0098890:CDS | 35.0% | |
| TTCTGGTCATTATCAGGTTA+TGG | + | chr1_3:4915325-4915344 | Msa0098890:CDS | 35.0% | |
| ! | GCATAAACTGATTCCATTTC+CGG | - | chr1_3:4915355-4915374 | None:intergenic | 35.0% |
| CAGTTTATGCAGATTCTTTC+TGG | + | chr1_3:4915365-4915384 | Msa0098890:CDS | 35.0% | |
| !! | TTGCTGGTATAAGCATTGAA+TGG | + | chr1_3:4915396-4915415 | Msa0098890:CDS | 35.0% |
| !! | TAAGCATTGAATGGTGGAAA+TGG | + | chr1_3:4915405-4915424 | Msa0098890:CDS | 35.0% |
| CAAGACTATTACAAGCAAGA+TGG | - | chr1_3:4915445-4915464 | None:intergenic | 35.0% | |
| ! | TGATTCTTTTGCTAGGTTCT+TGG | + | chr1_3:4915562-4915581 | Msa0098890:CDS | 35.0% |
| !!! | AAAGATGGAACTTTTAGGGT+TGG | + | chr1_3:4915691-4915710 | Msa0098890:CDS | 35.0% |
| GGTAAACAAGAAACCAACAA+AGG | - | chr1_3:4915737-4915756 | None:intergenic | 35.0% | |
| !!! | TTGCTAGTTTTTGTGTGACT+GGG | + | chr1_3:4915786-4915805 | Msa0098890:CDS | 35.0% |
| ! | TTTTCGGCTAGTGTTTATGT+TGG | + | chr1_3:4915839-4915858 | Msa0098890:CDS | 35.0% |
| ! | TTGATGTGAAGTGTTCTTCT+TGG | + | chr1_3:4915909-4915928 | Msa0098890:CDS | 35.0% |
| AAGACACACAATTGTAAGGA+AGG | - | chr1_3:4916054-4916073 | None:intergenic | 35.0% | |
| CAGAAAGACACACAATTGTA+AGG | - | chr1_3:4916058-4916077 | None:intergenic | 35.0% | |
| CTTACAATTGTGTGTCTTTC+TGG | + | chr1_3:4916056-4916075 | Msa0098890:CDS | 35.0% | |
| TGCTTACTATTCAGACTTTG+AGG | + | chr1_3:4916089-4916108 | Msa0098890:CDS | 35.0% | |
| ! | TATTCAGACTTTGAGGAATG+CGG | + | chr1_3:4916096-4916115 | Msa0098890:CDS | 35.0% |
| CAAACTAAATTTCTCGGAAC+CGG | - | chr1_3:4916148-4916167 | None:intergenic | 35.0% | |
| ! | GGTTCCGAGAAATTTAGTTT+GGG | + | chr1_3:4916147-4916166 | Msa0098890:CDS | 35.0% |
| GCTTCCCAAACTAAATTTCT+CGG | - | chr1_3:4916154-4916173 | None:intergenic | 35.0% | |
| TTGCACAGATCCTTAACCAA+AGG | - | chr1_3:4904917-4904936 | None:intergenic | 40.0% | |
| TAATTGCGTGTCTTTCTGGA+AGG | + | chr1_3:4904955-4904974 | Msa0098890:CDS | 40.0% | |
| CGTCTGAATGGTAAGTAGAT+TGG | - | chr1_3:4904981-4905000 | None:intergenic | 40.0% | |
| TACTTACCATTCAGACGTTG+AGG | + | chr1_3:4904984-4905003 | Msa0098890:CDS | 40.0% | |
| TGGGAAGCTGTTAATACTCA+TGG | + | chr1_3:4905061-4905080 | Msa0098890:intron | 40.0% | |
| !! | TACTGATACTGGTTCATCTG+AGG | + | chr1_3:4905221-4905240 | Msa0098890:intron | 40.0% |
| CAAATATCCATTGCCGCATA+AGG | - | chr1_3:4905329-4905348 | None:intergenic | 40.0% | |
| AACAATCAGCAGCATAAGGA+AGG | - | chr1_3:4905475-4905494 | None:intergenic | 40.0% | |
| AAGCAACAATCAGCAGCATA+AGG | - | chr1_3:4905479-4905498 | None:intergenic | 40.0% | |
| TGTGATAAGATTTGGCATCC+AGG | - | chr1_3:4905745-4905764 | None:intergenic | 40.0% | |
| GAAGCAGACTTGTATCGTTA+AGG | - | chr1_3:4905794-4905813 | None:intergenic | 40.0% | |
| ! | TTGTCTTCTAGGGAAAGTGA+AGG | + | chr1_3:4906073-4906092 | Msa0098890:intron | 40.0% |
| AGTGTTTGACTATAGCTCAC+AGG | - | chr1_3:4906142-4906161 | None:intergenic | 40.0% | |
| !! | GAGTGCATGGGTTAGTATAT+AGG | + | chr1_3:4906410-4906429 | Msa0098890:intron | 40.0% |
| ! | TCATTGGAGAAAGCATGTGA+TGG | + | chr1_3:4906556-4906575 | Msa0098890:intron | 40.0% |
| GTTTGTCAGATATATCTGGC+CGG | + | chr1_3:4906657-4906676 | Msa0098890:intron | 40.0% | |
| ! | CTCCTTTTGCTAGGTTAAAC+CGG | - | chr1_3:4906679-4906698 | None:intergenic | 40.0% |
| GTTTAACCTAGCAAAAGGAG+TGG | + | chr1_3:4906679-4906698 | Msa0098890:intron | 40.0% | |
| CAGCAAATGAACAAAGAAGC+AGG | - | chr1_3:4906857-4906876 | None:intergenic | 40.0% | |
| AGATCATCAGAACCATGACA+TGG | - | chr1_3:4906880-4906899 | None:intergenic | 40.0% | |
| AAACCTTGCCAGCAATTACA+GGG | - | chr1_3:4907049-4907068 | None:intergenic | 40.0% | |
| TGTTGACAGTTCAGAATCCA+TGG | + | chr1_3:4907176-4907195 | Msa0098890:CDS | 40.0% | |
| !! | AACTCTAAAGCATCTTCTGC+GGG | - | chr1_3:4907213-4907232 | None:intergenic | 40.0% |
| CATAAACTGCGCATCATAGA+AGG | + | chr1_3:4907249-4907268 | Msa0098890:CDS | 40.0% | |
| TAAACTGCGCATCATAGAAG+GGG | + | chr1_3:4907251-4907270 | Msa0098890:CDS | 40.0% | |
| ACATCCAAGTAGACACGATT+TGG | + | chr1_3:4907360-4907379 | Msa0098890:intron | 40.0% | |
| TCTTCCAAATCGTGTCTACT+TGG | - | chr1_3:4907367-4907386 | None:intergenic | 40.0% | |
| ! | AAGTAGACACGATTTGGAAG+AGG | + | chr1_3:4907366-4907385 | Msa0098890:intron | 40.0% |
| ! | AATTATTGGCTGCGAGGAAT+AGG | - | chr1_3:4907489-4907508 | None:intergenic | 40.0% |
| ! | ATGTACAATTATTGGCTGCG+AGG | - | chr1_3:4907495-4907514 | None:intergenic | 40.0% |
| ATAACCTGGCAATAATGACG+CGG | - | chr1_3:4907598-4907617 | None:intergenic | 40.0% | |
| TGTTCTATCTACCAGATGAG+TGG | - | chr1_3:4907686-4907705 | None:intergenic | 40.0% | |
| ATGTTACTAAAAGCAGGAGG+GGG | + | chr1_3:4907889-4907908 | Msa0098890:intron | 40.0% | |
| AGTCAGCTTTCAATCTAAGG+GGG | - | chr1_3:4908016-4908035 | None:intergenic | 40.0% | |
| CAGTCAGCTTTCAATCTAAG+GGG | - | chr1_3:4908017-4908036 | None:intergenic | 40.0% | |
| CTTAACAGCAGTACTACAGT+AGG | - | chr1_3:4908076-4908095 | None:intergenic | 40.0% | |
| CTACTGTAGTACTGCTGTTA+AGG | + | chr1_3:4908074-4908093 | Msa0098890:intron | 40.0% | |
| GTGCAAAATTCTGTGGCTAT+AGG | - | chr1_3:4908105-4908124 | None:intergenic | 40.0% | |
| TCACGAGTCTCTTTATCTTG+AGG | + | chr1_3:4908170-4908189 | Msa0098890:intron | 40.0% | |
| CGTGCTATCCTTATGTGTTA+TGG | - | chr1_3:4908305-4908324 | None:intergenic | 40.0% | |
| TACGGAAAGAGAAAGGAAGA+TGG | + | chr1_3:4908460-4908479 | Msa0098890:intron | 40.0% | |
| TGCGTCTAGCAGAATGAATT+AGG | - | chr1_3:4909048-4909067 | None:intergenic | 40.0% | |
| ! | CATTCTGCTAGACGCAATTT+TGG | + | chr1_3:4909052-4909071 | Msa0098890:intron | 40.0% |
| !!! | CTTCAGCCTCACTTTTTGTT+TGG | - | chr1_3:4909281-4909300 | None:intergenic | 40.0% |
| ! | CAACGGATTCAACTTTCTGT+TGG | + | chr1_3:4909373-4909392 | Msa0098890:intron | 40.0% |
| CATTTCGGTTCAATTCGGTT+CGG | - | chr1_3:4909560-4909579 | None:intergenic | 40.0% | |
| ACCGAACTGAACCAAATGTA+TGG | + | chr1_3:4909629-4909648 | Msa0098890:intron | 40.0% | |
| GGTTAACCGAACCATACATT+TGG | - | chr1_3:4909643-4909662 | None:intergenic | 40.0% | |
| AAATGGCATGAGCATAACAG+AGG | + | chr1_3:4909984-4910003 | Msa0098890:intron | 40.0% | |
| !! | TAGTTTGGTTTGGTTCGGTT+CGG | + | chr1_3:4910160-4910179 | Msa0098890:intron | 40.0% |
| ATCCAAAAACTGAACCGAAC+CGG | - | chr1_3:4910190-4910209 | None:intergenic | 40.0% | |
| ! | GGAAACGTTTCTTTAGGAGT+GGG | - | chr1_3:4910220-4910239 | None:intergenic | 40.0% |
| ! | TGGAAACGTTTCTTTAGGAG+TGG | - | chr1_3:4910221-4910240 | None:intergenic | 40.0% |
| ! | CACAATCTTGGTGGCATTTA+GGG | + | chr1_3:4910265-4910284 | Msa0098890:intron | 40.0% |
| AAGAAGATAAGGGTGGTTGA+AGG | - | chr1_3:4910807-4910826 | None:intergenic | 40.0% | |
| GTCAAATGTGCATCTGTCAA+AGG | - | chr1_3:4910926-4910945 | None:intergenic | 40.0% | |
| GAAGCTCCGATACTTCAAAA+TGG | + | chr1_3:4911081-4911100 | Msa0098890:intron | 40.0% | |
| ACACAAGTATCCGTGTGTAT+CGG | - | chr1_3:4911236-4911255 | None:intergenic | 40.0% | |
| ATGCAATTGTTTGTGTGGTG+TGG | - | chr1_3:4911375-4911394 | None:intergenic | 40.0% | |
| AAATCAAGATACGATACGGC+TGG | - | chr1_3:4911671-4911690 | None:intergenic | 40.0% | |
| !! | ATTTTTCCGTATCGGCGTAT+CGG | + | chr1_3:4911696-4911715 | Msa0098890:intron | 40.0% |
| !! | TTTTGGAGATGTGGCTCAAT+TGG | - | chr1_3:4912427-4912446 | None:intergenic | 40.0% |
| !! | TACTTTGAAAGCGACGCTTT+TGG | - | chr1_3:4912444-4912463 | None:intergenic | 40.0% |
| AAGAATTCCACATGTGCTGT+GGG | - | chr1_3:4912468-4912487 | None:intergenic | 40.0% | |
| ATTAAACAACCCAATCCTCG+AGG | + | chr1_3:4912680-4912699 | Msa0098890:intron | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | - | chr1_3:4912858-4912877 | None:intergenic | 40.0% | |
| AAATATTACTCCCTCCGTCT+CGG | - | chr1_3:4913070-4913089 | None:intergenic | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr1_3:4914077-4914096 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr1_3:4914076-4914095 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr1_3:4914076-4914095 | Msa0098890:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr1_3:4914077-4914096 | Msa0098890:intron | 40.0% | |
| !!! | GAAGATTTTGGGTTTGATCC+TGG | + | chr1_3:4914351-4914370 | Msa0098890:intron | 40.0% |
| ! | AGGTATTTGGTTCGAGATCT+GGG | - | chr1_3:4914454-4914473 | None:intergenic | 40.0% |
| TAGGGTCAATCAGGTAAACT+AGG | - | chr1_3:4914677-4914696 | None:intergenic | 40.0% | |
| GAATACATTAGGTGGGGATA+GGG | - | chr1_3:4914695-4914714 | None:intergenic | 40.0% | |
| TGAATACATTAGGTGGGGAT+AGG | - | chr1_3:4914696-4914715 | None:intergenic | 40.0% | |
| TTGTAGAGAGGGAAGTAAGT+AGG | - | chr1_3:4914733-4914752 | None:intergenic | 40.0% | |
| CTTCAAAAACACAACACTCG+CGG | + | chr1_3:4914885-4914904 | Msa0098890:CDS | 40.0% | |
| !!! | GTTTTGGAGATGTCTGTAAG+CGG | - | chr1_3:4915048-4915067 | None:intergenic | 40.0% |
| ! | GTTTGGTTAGTTCGGAGAAA+AGG | - | chr1_3:4915133-4915152 | None:intergenic | 40.0% |
| TTTCTCCGAACTAACCAAAC+TGG | + | chr1_3:4915133-4915152 | Msa0098890:CDS | 40.0% | |
| TTCTCCGAACTAACCAAACT+GGG | + | chr1_3:4915134-4915153 | Msa0098890:CDS | 40.0% | |
| ! | CAAACCCAGTTTGGTTAGTT+CGG | - | chr1_3:4915141-4915160 | None:intergenic | 40.0% |
| TTCTTCGAACAAACCCAGTT+TGG | - | chr1_3:4915150-4915169 | None:intergenic | 40.0% | |
| ! | CTGGGTTTGTTCGAAGAAAA+AGG | + | chr1_3:4915152-4915171 | Msa0098890:CDS | 40.0% |
| ! | GTGCTTTCTGGAGGATTAAT+GGG | + | chr1_3:4915266-4915285 | Msa0098890:CDS | 40.0% |
| ! | GAGGATTAATGGGTCTTCTT+TGG | + | chr1_3:4915276-4915295 | Msa0098890:CDS | 40.0% |
| GGTCTTCTTTGGATTCAAAG+TGG | + | chr1_3:4915287-4915306 | Msa0098890:CDS | 40.0% | |
| TGGATTCAAAGTGGTTGGAT+TGG | + | chr1_3:4915296-4915315 | Msa0098890:CDS | 40.0% | |
| AGGTTATGGTTAACCGGAAA+TGG | + | chr1_3:4915339-4915358 | Msa0098890:CDS | 40.0% | |
| ! | CTTTCTGGTAATGTTCTTGC+TGG | + | chr1_3:4915380-4915399 | Msa0098890:CDS | 40.0% |
| !! | CTGGTATAAGCATTGAATGG+TGG | + | chr1_3:4915399-4915418 | Msa0098890:CDS | 40.0% |
| CAGGATAATAACTCCAATGC+TGG | - | chr1_3:4915595-4915614 | None:intergenic | 40.0% | |
| ! | ATCCTGTGATGTGTTTTGCT+AGG | + | chr1_3:4915609-4915628 | Msa0098890:CDS | 40.0% |
| !!! | TTTTAGGGTTGGCTCTGTTT+TGG | + | chr1_3:4915702-4915721 | Msa0098890:CDS | 40.0% |
| ! | TTGGATTTGGTACCCTTTGT+TGG | + | chr1_3:4915721-4915740 | Msa0098890:CDS | 40.0% |
| TTTACCTAATTGGGGTGAGA+GGG | + | chr1_3:4915751-4915770 | Msa0098890:CDS | 40.0% | |
| !!! | CTTGCTAGTTTTTGTGTGAC+TGG | + | chr1_3:4915785-4915804 | Msa0098890:CDS | 40.0% |
| ! | TGTGAAGTGTTCTTCTTGGA+TGG | + | chr1_3:4915913-4915932 | Msa0098890:CDS | 40.0% |
| AGTGTTCTTCTTGGATGGAT+TGG | + | chr1_3:4915918-4915937 | Msa0098890:CDS | 40.0% | |
| !! | TCTTGGATGGATTGGTTTCA+TGG | + | chr1_3:4915926-4915945 | Msa0098890:CDS | 40.0% |
| ATCTTCCTCAAATTACACCG+TGG | - | chr1_3:4915995-4916014 | None:intergenic | 40.0% | |
| TTTGAGGAAGATTTCGCCTT+TGG | + | chr1_3:4916003-4916022 | Msa0098890:CDS | 40.0% | |
| GAAGATTTCGCCTTTGGTTA+AGG | + | chr1_3:4916009-4916028 | Msa0098890:CDS | 40.0% | |
| TTGCACAGATCCTTAACCAA+AGG | - | chr1_3:4904917-4904936 | None:intergenic | 40.0% | |
| CAATTGTGTGTCTTTCTGGA+AGG | + | chr1_3:4916060-4916079 | Msa0098890:CDS | 40.0% | |
| CGGTTCCGAGAAATTTAGTT+TGG | + | chr1_3:4916146-4916165 | Msa0098890:CDS | 40.0% | |
| TGGGAAGCTGTTAATACTCA+TGG | + | chr1_3:4905061-4905080 | Msa0098890:intron | 40.0% | |
| TTGAACACCATCTGTTTCCG+CGG | + | chr1_3:4904861-4904880 | Msa0098890:CDS | 45.0% | |
| ACTTTCCTTAGACTACACCG+AGG | - | chr1_3:4904890-4904909 | None:intergenic | 45.0% | |
| TCTAAGGAAAGTCTCGCCTT+TGG | + | chr1_3:4904898-4904917 | Msa0098890:CDS | 45.0% | |
| GAAAGTCTCGCCTTTGGTTA+AGG | + | chr1_3:4904904-4904923 | Msa0098890:CDS | 45.0% | |
| AGCATTCCTCAACGTCTGAA+TGG | - | chr1_3:4904993-4905012 | None:intergenic | 45.0% | |
| GCCTGTTCGATTTCCTTATG+CGG | + | chr1_3:4905313-4905332 | Msa0098890:intron | 45.0% | |
| TCGATTTCCTTATGCGGCAA+TGG | + | chr1_3:4905319-4905338 | Msa0098890:intron | 45.0% | |
| CCAAACGACGATGAATTCCA+AGG | - | chr1_3:4905376-4905395 | None:intergenic | 45.0% | |
| CCTTGGAATTCATCGTCGTT+TGG | + | chr1_3:4905373-4905392 | Msa0098890:intron | 45.0% | |
| ATAAGGAAGGAGCCAGGAAA+TGG | - | chr1_3:4905462-4905481 | None:intergenic | 45.0% | |
| CTTCTACCGTATAAGTCGTC+TGG | + | chr1_3:4905636-4905655 | Msa0098890:intron | 45.0% | |
| CGTTCACCAGACGACTTATA+CGG | - | chr1_3:4905645-4905664 | None:intergenic | 45.0% | |
| !! | GTTTTATTCCCGACAGAACC+TGG | + | chr1_3:4905724-4905743 | Msa0098890:intron | 45.0% |
| ATTTGGCATCCAGGTTCTGT+CGG | - | chr1_3:4905736-4905755 | None:intergenic | 45.0% | |
| GCAGACTTGTATCGTTAAGG+AGG | - | chr1_3:4905791-4905810 | None:intergenic | 45.0% | |
| ! | TGGTCACTTTGTTCCGAATG+AGG | - | chr1_3:4905918-4905937 | None:intergenic | 45.0% |
| AGTGAAGGTTCGTTTCAGTG+TGG | + | chr1_3:4906088-4906107 | Msa0098890:intron | 45.0% | |
| ACAGGTCTTCAACTTCTCTG+TGG | - | chr1_3:4906124-4906143 | None:intergenic | 45.0% | |
| ! | GTTCATTTGCTGCCATGTCA+TGG | + | chr1_3:4906865-4906884 | Msa0098890:intron | 45.0% |
| GGATTGATAAGCAGGCAAGA+TGG | - | chr1_3:4907028-4907047 | None:intergenic | 45.0% | |
| AATCCCTGTAATTGCTGGCA+AGG | + | chr1_3:4907043-4907062 | Msa0098890:intron | 45.0% | |
| CAAACCTTGCCAGCAATTAC+AGG | - | chr1_3:4907050-4907069 | None:intergenic | 45.0% | |
| TGCGGGTATAGTTTCATCCA+TGG | - | chr1_3:4907196-4907215 | None:intergenic | 45.0% | |
| GACTAGAACCGTGAATGGAA+AGG | - | chr1_3:4907399-4907418 | None:intergenic | 45.0% | |
| TCTAGTCCTCGCAGAATATG+TGG | + | chr1_3:4907412-4907431 | Msa0098890:intron | 45.0% | |
| TGTCAGACGTGCAATTGTTG+AGG | - | chr1_3:4907568-4907587 | None:intergenic | 45.0% | |
| CCTCACTTGAGTTACACTTC+TGG | - | chr1_3:4907803-4907822 | None:intergenic | 45.0% | |
| ! | CCAGAAGTGTAACTCAAGTG+AGG | + | chr1_3:4907800-4907819 | Msa0098890:intron | 45.0% |
| TGTTACTAAAAGCAGGAGGG+GGG | + | chr1_3:4907890-4907909 | Msa0098890:intron | 45.0% | |
| !!! | GATAGCACGCTCACTTTTTG+TGG | + | chr1_3:4908316-4908335 | Msa0098890:intron | 45.0% |
| !! | CTGCTAGACGCAATTTTGGT+TGG | + | chr1_3:4909056-4909075 | Msa0098890:intron | 45.0% |
| GTCGTGATACTAGGTTGCAA+CGG | + | chr1_3:4909356-4909375 | Msa0098890:intron | 45.0% | |
| AGCAAGTGGTGCACATATTG+AGG | - | chr1_3:4909462-4909481 | None:intergenic | 45.0% | |
| ATGTGCAAGAAACTTAGGGG+TGG | + | chr1_3:4909510-4909529 | Msa0098890:intron | 45.0% | |
| TGTGCAAGAAACTTAGGGGT+GGG | + | chr1_3:4909511-4909530 | Msa0098890:intron | 45.0% | |
| ! | GGTTCGGTTAACCGTTTGTT+TGG | + | chr1_3:4909650-4909669 | Msa0098890:intron | 45.0% |
| !! | TTTGGTTCGGTTCGGTTAAC+CGG | + | chr1_3:4910065-4910084 | Msa0098890:intron | 45.0% |
| !!! | AACCGGTTCGGTTCAGTTTT+TGG | + | chr1_3:4910185-4910204 | Msa0098890:intron | 45.0% |
| ! | GCACAATCTTGGTGGCATTT+AGG | + | chr1_3:4910264-4910283 | Msa0098890:intron | 45.0% |
| ! | AATCTTGGTGGCATTTAGGG+TGG | + | chr1_3:4910268-4910287 | Msa0098890:intron | 45.0% |
| ! | ATCTTGGTGGCATTTAGGGT+GGG | + | chr1_3:4910269-4910288 | Msa0098890:intron | 45.0% |
| ! | GTCTCTGAAGAAGATAAGGG+TGG | - | chr1_3:4910814-4910833 | None:intergenic | 45.0% |
| ATCGGAGCTTCACATGTGAT+AGG | - | chr1_3:4911072-4911091 | None:intergenic | 45.0% | |
| ATATCGGTGCAAGATACGCA+GGG | - | chr1_3:4911122-4911141 | None:intergenic | 45.0% | |
| !! | GATACGTATCGGGAAGTATC+GGG | - | chr1_3:4911148-4911167 | None:intergenic | 45.0% |
| ! | GGATACGTATCGGGAAGTAT+CGG | - | chr1_3:4911149-4911168 | None:intergenic | 45.0% |
| GATACTTCCCGATACGTATC+CGG | + | chr1_3:4911148-4911167 | Msa0098890:intron | 45.0% | |
| ATACTCTCCGGATACGTATC+GGG | - | chr1_3:4911158-4911177 | None:intergenic | 45.0% | |
| GATACTCTCCGGATACGTAT+CGG | - | chr1_3:4911159-4911178 | None:intergenic | 45.0% | |
| CACAAGTATCCGTGTGTATC+GGG | - | chr1_3:4911235-4911254 | None:intergenic | 45.0% | |
| TTGTTTGTGTGGTGTGGTGT+GGG | - | chr1_3:4911369-4911388 | None:intergenic | 45.0% | |
| ATTGTTTGTGTGGTGTGGTG+TGG | - | chr1_3:4911370-4911389 | None:intergenic | 45.0% | |
| CACCGTTGAAGTCTTGGTAT+CGG | + | chr1_3:4911460-4911479 | Msa0098890:intron | 45.0% | |
| GTCCGATACCAAGACTTCAA+CGG | - | chr1_3:4911465-4911484 | None:intergenic | 45.0% | |
| ATGTTAATGTGCTACGAGCC+TGG | + | chr1_3:4911555-4911574 | Msa0098890:intron | 45.0% | |
| TCCGTATCGTATCTCGTATC+CGG | + | chr1_3:4911731-4911750 | Msa0098890:intron | 45.0% | |
| ! | AATTAGGGTGTTCCTCCTTC+GGG | - | chr1_3:4912093-4912112 | None:intergenic | 45.0% |
| ! | GAATTAGGGTGTTCCTCCTT+CGG | - | chr1_3:4912094-4912113 | None:intergenic | 45.0% |
| ! | AAAGTATCCCACAGCACATG+TGG | + | chr1_3:4912458-4912477 | Msa0098890:intron | 45.0% |
| CAAGAATTCCACATGTGCTG+TGG | - | chr1_3:4912469-4912488 | None:intergenic | 45.0% | |
| ATGGGTCAGTTATTCCGAGA+CGG | + | chr1_3:4913053-4913072 | Msa0098890:intron | 45.0% | |
| ACGATGTGAAATACACCCTC+CGG | - | chr1_3:4914095-4914114 | None:intergenic | 45.0% | |
| ! | GGTATTTGGTTCGAGATCTG+GGG | - | chr1_3:4914453-4914472 | None:intergenic | 45.0% |
| ! | GAGGTATTTGGTTCGAGATC+TGG | - | chr1_3:4914455-4914474 | None:intergenic | 45.0% |
| CATCAATCGAGTTACTCACG+TGG | + | chr1_3:4914533-4914552 | Msa0098890:intron | 45.0% | |
| TCGAGTTACTCACGTGGAAA+CGG | + | chr1_3:4914539-4914558 | Msa0098890:intron | 45.0% | |
| GATGCATGGATCTCCATTGA+CGG | + | chr1_3:4914909-4914928 | Msa0098890:CDS | 45.0% | |
| GGAATGCATCAGTGACATCT+TGG | - | chr1_3:4915007-4915026 | None:intergenic | 45.0% | |
| CATCTCCAAAACTTTGCCAC+TGG | + | chr1_3:4915056-4915075 | Msa0098890:CDS | 45.0% | |
| ! | AACTGCCAGTGGCAAAGTTT+TGG | - | chr1_3:4915064-4915083 | None:intergenic | 45.0% |
| ! | CGTGCTTTCTGGAGGATTAA+TGG | + | chr1_3:4915265-4915284 | Msa0098890:CDS | 45.0% |
| !! | GGTTGGATTGGTCATGATTC+TGG | + | chr1_3:4915308-4915327 | Msa0098890:CDS | 45.0% |
| TCTTGGTCAGTTACCAGCAT+TGG | + | chr1_3:4915579-4915598 | Msa0098890:CDS | 45.0% | |
| AGCCTAGCAAAACACATCAC+AGG | - | chr1_3:4915614-4915633 | None:intergenic | 45.0% | |
| !!! | GGTTGGCTCTGTTTTGGATT+TGG | + | chr1_3:4915708-4915727 | Msa0098890:CDS | 45.0% |
| GTTTACCTAATTGGGGTGAG+AGG | + | chr1_3:4915750-4915769 | Msa0098890:CDS | 45.0% | |
| AAAACCCTCTCACCCCAATT+AGG | - | chr1_3:4915758-4915777 | None:intergenic | 45.0% | |
| TGTTTATGTTGGTCCACCGA+CGG | + | chr1_3:4915850-4915869 | Msa0098890:CDS | 45.0% | |
| TCAAACCAATCATGAGCCGT+CGG | - | chr1_3:4915869-4915888 | None:intergenic | 45.0% | |
| TGGTTTGAGAAGCAAGCTCA+TGG | + | chr1_3:4915881-4915900 | Msa0098890:CDS | 45.0% | |
| !! | TGGATGGATTGGTTTCATGG+TGG | + | chr1_3:4915929-4915948 | Msa0098890:CDS | 45.0% |
| ATTTGTTTCCGCGTCTTCCA+CGG | + | chr1_3:4915975-4915994 | Msa0098890:CDS | 45.0% | |
| AAATTACACCGTGGAAGACG+CGG | - | chr1_3:4915986-4916005 | None:intergenic | 45.0% | |
| GTCTTCCACGGTGTAATTTG+AGG | + | chr1_3:4915987-4916006 | Msa0098890:CDS | 45.0% | |
| GGCAAGGGATCTTACTAAAC+CGG | + | chr1_3:4916126-4916145 | Msa0098890:CDS | 45.0% | |
| !!! | AATAATTATTTTAAAAATTG+TGG | + | chr1_3:4909153-4909172 | Msa0098890:intron | 5.0% |
| !!! | TTGATTTTTTTTTTTTTTTA+AGG | - | chr1_3:4909255-4909274 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAATATTTGA+AGG | - | chr1_3:4913489-4913508 | None:intergenic | 5.0% |
| !!! | AAAAAATTACTTTTATTTTT+GGG | - | chr1_3:4914611-4914630 | None:intergenic | 5.0% |
| !!! | AAAAAAATTACTTTTATTTT+TGG | - | chr1_3:4914612-4914631 | None:intergenic | 5.0% |
| !! | GGAATGCTGCTTTGCAAGCT+CGG | + | chr1_3:4905005-4905024 | Msa0098890:CDS | 50.0% |
| !! | GAATGCTGCTTTGCAAGCTC+GGG | + | chr1_3:4905006-4905025 | Msa0098890:CDS | 50.0% |
| GCCGCATAAGGAAATCGAAC+AGG | - | chr1_3:4905317-4905336 | None:intergenic | 50.0% | |
| TTTGGCATCCAGGTTCTGTC+GGG | - | chr1_3:4905735-4905754 | None:intergenic | 50.0% | |
| ! | GGCCGGTTTAACCTAGCAAA+AGG | + | chr1_3:4906674-4906693 | Msa0098890:intron | 50.0% |
| CCAGATCCACATATTCTGCG+AGG | - | chr1_3:4907421-4907440 | None:intergenic | 50.0% | |
| CCTCGCAGAATATGTGGATC+TGG | + | chr1_3:4907418-4907437 | Msa0098890:intron | 50.0% | |
| ACTACCGCGTCATTATTGCC+AGG | + | chr1_3:4907591-4907610 | Msa0098890:intron | 50.0% | |
| GAGTTTGAGCACCACTCATC+TGG | + | chr1_3:4907672-4907691 | Msa0098890:intron | 50.0% | |
| GTTACTAAAAGCAGGAGGGG+GGG | + | chr1_3:4907891-4907910 | Msa0098890:intron | 50.0% | |
| AGTTAGAAGGGGCAAGCAAG+TGG | - | chr1_3:4909476-4909495 | None:intergenic | 50.0% | |
| ! | AAGAAACTTAGGGGTGGGCT+TGG | + | chr1_3:4909516-4909535 | Msa0098890:intron | 50.0% |
| AGGCTGGTATTACTGTACCC+AGG | + | chr1_3:4910004-4910023 | Msa0098890:intron | 50.0% | |
| !! | GTTCGGTTCGGTTAACCGTT+CGG | + | chr1_3:4910069-4910088 | Msa0098890:intron | 50.0% |
| !! | TTCGGTTCGGTTAACCGGTT+CGG | + | chr1_3:4910173-4910192 | Msa0098890:intron | 50.0% |
| TGCAAGATACGCAGGGGATA+CGG | - | chr1_3:4911115-4911134 | None:intergenic | 50.0% | |
| TATCGGTGCAAGATACGCAG+GGG | - | chr1_3:4911121-4911140 | None:intergenic | 50.0% | |
| GATATCGGTGCAAGATACGC+AGG | - | chr1_3:4911123-4911142 | None:intergenic | 50.0% | |
| !! | GGGAAGTATCGGGCAGATAT+CGG | - | chr1_3:4911138-4911157 | None:intergenic | 50.0% |
| ! | CGGGACGTATCGGAAAGTAT+CGG | - | chr1_3:4911216-4911235 | None:intergenic | 50.0% |
| TTTGGCCACCGTTGAAGTCT+TGG | + | chr1_3:4911454-4911473 | Msa0098890:intron | 50.0% | |
| CGATACCAAGACTTCAACGG+TGG | - | chr1_3:4911462-4911481 | None:intergenic | 50.0% | |
| ! | GTCTTGGTATCGGACGACTT+TGG | + | chr1_3:4911470-4911489 | Msa0098890:intron | 50.0% |
| ACTACACCGATACGCCGATA+CGG | - | chr1_3:4911705-4911724 | None:intergenic | 50.0% | |
| CCCGGATACGAGATACGATA+CGG | - | chr1_3:4911735-4911754 | None:intergenic | 50.0% | |
| CCGTATCGTATCTCGTATCC+GGG | + | chr1_3:4911732-4911751 | Msa0098890:intron | 50.0% | |
| ! | ACGGAATTGGTGATAGGCTG+TGG | - | chr1_3:4911760-4911779 | None:intergenic | 50.0% |
| ! | ATTAGGGTGTTCCTCCTTCG+GGG | - | chr1_3:4912092-4912111 | None:intergenic | 50.0% |
| TGGAGATGTGGCTCAATTGG+TGG | - | chr1_3:4912424-4912443 | None:intergenic | 50.0% | |
| !! | AAGCGACGCTTTTGGAGATG+TGG | - | chr1_3:4912436-4912455 | None:intergenic | 50.0% |
| CACAAGTTACACCCACTACG+TGG | + | chr1_3:4912510-4912529 | Msa0098890:intron | 50.0% | |
| CAAGCGAGTTTCCACGTAGT+GGG | - | chr1_3:4912524-4912543 | None:intergenic | 50.0% | |
| TCAAGCGAGTTTCCACGTAG+TGG | - | chr1_3:4912525-4912544 | None:intergenic | 50.0% | |
| GTCAGTTATTCCGAGACGGA+GGG | + | chr1_3:4913057-4913076 | Msa0098890:intron | 50.0% | |
| GCGATGAGTTGCACGTTTGA+AGG | - | chr1_3:4914257-4914276 | None:intergenic | 50.0% | |
| ! | GAAGGGTGTGAGAATGTGTG+TGG | - | chr1_3:4914771-4914790 | None:intergenic | 50.0% |
| GTCGTAGATCTTGCCGTCAA+TGG | - | chr1_3:4914925-4914944 | None:intergenic | 50.0% | |
| TGCATCAGTGACATCTTGGC+CGG | - | chr1_3:4915003-4915022 | None:intergenic | 50.0% | |
| GATGTCTGTAAGCGGATGGA+GGG | - | chr1_3:4915040-4915059 | None:intergenic | 50.0% | |
| AGATGTCTGTAAGCGGATGG+AGG | - | chr1_3:4915041-4915060 | None:intergenic | 50.0% | |
| TGGAGATGTCTGTAAGCGGA+TGG | - | chr1_3:4915044-4915063 | None:intergenic | 50.0% | |
| TTAGTGCACGTGCTTTCTGG+AGG | + | chr1_3:4915257-4915276 | Msa0098890:CDS | 50.0% | |
| TTTGAGGAATGCGGCTTTGC+AGG | + | chr1_3:4916105-4916124 | Msa0098890:CDS | 50.0% | |
| ATCTGTTTCCGCGGCTACCT+CGG | + | chr1_3:4904870-4904889 | Msa0098890:CDS | 55.0% | |
| ! | GGCTACCTCGGTGTAGTCTA+AGG | + | chr1_3:4904882-4904901 | Msa0098890:CDS | 55.0% |
| AGCAGCATAAGGAAGGAGCC+AGG | - | chr1_3:4905468-4905487 | None:intergenic | 55.0% | |
| AAAAGGAGTGGCGCGTCACT+TGG | + | chr1_3:4906691-4906710 | Msa0098890:intron | 55.0% | |
| AAAGGAGTGGCGCGTCACTT+GGG | + | chr1_3:4906692-4906711 | Msa0098890:intron | 55.0% | |
| GCGAGGACTAGAACCGTGAA+TGG | - | chr1_3:4907404-4907423 | None:intergenic | 55.0% | |
| ! | ACTTAGGGGTGGGCTTGGTT+CGG | + | chr1_3:4909521-4909540 | Msa0098890:intron | 55.0% |
| GGCATGAGCATAACAGAGGC+TGG | + | chr1_3:4909988-4910007 | Msa0098890:intron | 55.0% | |
| ! | GTGGCATTTAGGGTGGGTGT+GGG | + | chr1_3:4910275-4910294 | Msa0098890:intron | 55.0% |
| CCGTGTGTATCGGGACGTAT+CGG | - | chr1_3:4911226-4911245 | None:intergenic | 55.0% | |
| CCGATACGTCCCGATACACA+CGG | + | chr1_3:4911223-4911242 | Msa0098890:intron | 55.0% | |
| AAAGTGGACGGCGACCACTT+TGG | - | chr1_3:4911437-4911456 | None:intergenic | 55.0% | |
| AAAGTGGTCGCCGTCCACTT+TGG | + | chr1_3:4911436-4911455 | Msa0098890:intron | 55.0% | |
| TCAACGGTGGCCAAAGTGGA+CGG | - | chr1_3:4911449-4911468 | None:intergenic | 55.0% | |
| GACTTCAACGGTGGCCAAAG+TGG | - | chr1_3:4911453-4911472 | None:intergenic | 55.0% | |
| ! | ACACCAACAAAGCACCCCGA+AGG | + | chr1_3:4912075-4912094 | Msa0098890:intron | 55.0% |
| GGTCAGTTATTCCGAGACGG+AGG | + | chr1_3:4913056-4913075 | Msa0098890:intron | 55.0% | |
| AGGTGGGGATAGGGTCAATC+AGG | - | chr1_3:4914686-4914705 | None:intergenic | 55.0% | |
| AAATGGGCCAACCACCATCC+CGG | + | chr1_3:4914951-4914970 | Msa0098890:CDS | 55.0% | |
| GTCACGTAGGTAACTGCCAG+TGG | - | chr1_3:4915075-4915094 | None:intergenic | 55.0% | |
| CAGAGACGACGTAGTCACGT+AGG | - | chr1_3:4915088-4915107 | None:intergenic | 55.0% | |
| GCGTTAGTGCACGTGCTTTC+TGG | + | chr1_3:4915254-4915273 | Msa0098890:CDS | 55.0% | |
| AACCAATCATGAGCCGTCGG+TGG | - | chr1_3:4915866-4915885 | None:intergenic | 55.0% | |
| GAATGCGGCTTTGCAGGCAA+GGG | + | chr1_3:4916111-4916130 | Msa0098890:CDS | 55.0% | |
| GAGGTAGCCGCGGAAACAGA+TGG | - | chr1_3:4904871-4904890 | None:intergenic | 60.0% | |
| AGACTACACCGAGGTAGCCG+CGG | - | chr1_3:4904881-4904900 | None:intergenic | 60.0% | |
| ! | GACGCGCCACTCCTTTTGCT+AGG | - | chr1_3:4906688-4906707 | None:intergenic | 60.0% |
| CTGCGCATCATAGAAGGGGC+TGG | + | chr1_3:4907255-4907274 | Msa0098890:CDS | 60.0% | |
| ! | GGTGGCATTTAGGGTGGGTG+TGG | + | chr1_3:4910274-4910293 | Msa0098890:intron | 60.0% |
| TGGTGTGGTGTGGGTCGTAC+TGG | - | chr1_3:4911360-4911379 | None:intergenic | 60.0% | |
| TGGTGATAGGCTGTGGAGCC+CGG | - | chr1_3:4911753-4911772 | None:intergenic | 60.0% | |
| ! | CCTCCTTCGGGGTGCTTTGT+TGG | - | chr1_3:4912081-4912100 | None:intergenic | 60.0% |
| ! | CCAACAAAGCACCCCGAAGG+AGG | + | chr1_3:4912078-4912097 | Msa0098890:intron | 60.0% |
| ACAACACTCGCGGCGATGCA+TGG | + | chr1_3:4914895-4914914 | Msa0098890:CDS | 60.0% | |
| CTTCCTCTCCTCAACCTCGC+CGG | + | chr1_3:4914981-4915000 | Msa0098890:CDS | 60.0% | |
| GTCTGTAAGCGGATGGAGGG+TGG | - | chr1_3:4915037-4915056 | None:intergenic | 60.0% | |
| GTCCACCGACGGCTCATGAT+TGG | + | chr1_3:4915861-4915880 | Msa0098890:CDS | 60.0% | |
| GGAATGCGGCTTTGCAGGCA+AGG | + | chr1_3:4916110-4916129 | Msa0098890:CDS | 60.0% | |
| CATCTTGGCCGGCGAGGTTG+AGG | - | chr1_3:4914992-4915011 | None:intergenic | 65.0% | |
| CAGTGACATCTTGGCCGGCG+AGG | - | chr1_3:4914998-4915017 | None:intergenic | 65.0% | |
| CGGATGGAGGGTGGAAAGCG+AGG | - | chr1_3:4915028-4915047 | None:intergenic | 65.0% | |
| TGGGCCAACCACCATCCCGG+CGG | + | chr1_3:4914954-4914973 | Msa0098890:CDS | 70.0% | |
| AGGAGAGGAAGCTCGCCGCC+GGG | - | chr1_3:4914972-4914991 | None:intergenic | 70.0% | |
| GAGGAGAGGAAGCTCGCCGC+CGG | - | chr1_3:4914973-4914992 | None:intergenic | 70.0% | |
| TGGCCGGCGAGGTTGAGGAG+AGG | - | chr1_3:4914987-4915006 | None:intergenic | 70.0% | |
| ! | CTCGCCGCCGGGATGGTGGT+TGG | - | chr1_3:4914961-4914980 | None:intergenic | 75.0% |
| GAAGCTCGCCGCCGGGATGG+TGG | - | chr1_3:4914965-4914984 | None:intergenic | 75.0% | |
| GAGGAAGCTCGCCGCCGGGA+TGG | - | chr1_3:4914968-4914987 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 4904827 | 4916192 | 4904827 | ID=Msa0098890;Name=Msa0098890 |
| chr1_3 | mRNA | 4904827 | 4916192 | 4904827 | ID=Msa0098890-mRNA-1;Parent=Msa0098890;Name=Msa0098890-mRNA-1;_AED=0.22;_eAED=0.24;_QI=0|0|0|1|0|0|4|0|594 |
| chr1_3 | exon | 4904827 | 4905069 | 4904827 | ID=Msa0098890-mRNA-1:exon:1767;Parent=Msa0098890-mRNA-1 |
| chr1_3 | exon | 4907174 | 4907367 | 4907174 | ID=Msa0098890-mRNA-1:exon:1768;Parent=Msa0098890-mRNA-1 |
| chr1_3 | exon | 4907372 | 4907409 | 4907372 | ID=Msa0098890-mRNA-1:exon:1769;Parent=Msa0098890-mRNA-1 |
| chr1_3 | exon | 4914883 | 4916192 | 4914883 | ID=Msa0098890-mRNA-1:exon:1770;Parent=Msa0098890-mRNA-1 |
| chr1_3 | CDS | 4904827 | 4905069 | 4904827 | ID=Msa0098890-mRNA-1:cds;Parent=Msa0098890-mRNA-1 |
| chr1_3 | CDS | 4907174 | 4907367 | 4907174 | ID=Msa0098890-mRNA-1:cds;Parent=Msa0098890-mRNA-1 |
| chr1_3 | CDS | 4907372 | 4907409 | 4907372 | ID=Msa0098890-mRNA-1:cds;Parent=Msa0098890-mRNA-1 |
| chr1_3 | CDS | 4914883 | 4916192 | 4914883 | ID=Msa0098890-mRNA-1:cds;Parent=Msa0098890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
