Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099030 | XP_003588984.1 | 93.827 | 81 | 5 | 0 | 1 | 81 | 368 | 448 | 5.55e-43 | 171 |
| Msa0099030 | XP_003588984.1 | 96.452 | 451 | 16 | 0 | 144 | 594 | 3 | 453 | 0.0 | 906 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099030 | sp|O04353|DES6_BOROF | 65.596 | 436 | 150 | 0 | 159 | 594 | 13 | 448 | 0.0 | 633 |
| Msa0099030 | sp|O04353|DES6_BOROF | 76.543 | 81 | 19 | 0 | 1 | 81 | 363 | 443 | 2.40e-36 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099030 | G7I9X4 | 93.827 | 81 | 5 | 0 | 1 | 81 | 368 | 448 | 2.65e-43 | 171 |
| Msa0099030 | G7I9X4 | 96.452 | 451 | 16 | 0 | 144 | 594 | 3 | 453 | 0.0 | 906 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0096670 | Msa0099030 | 0.866176 | 3.451715e-65 | -8.615850e-47 |
| Msa0098890 | Msa0099030 | 0.894351 | 2.676549e-75 | -8.615850e-47 |
| Msa0099030 | Msa0099080 | 0.849387 | 3.341149e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099030 | MtrunA17_Chr1g0151391 | 96.452 | 451 | 16 | 0 | 144 | 594 | 3 | 453 | 0.0 | 906 |
| Msa0099030 | MtrunA17_Chr1g0151391 | 93.827 | 81 | 5 | 0 | 1 | 81 | 368 | 448 | 5.10e-47 | 171 |
| Msa0099030 | MtrunA17_Chr8g0361931 | 61.830 | 448 | 170 | 1 | 148 | 594 | 2 | 449 | 0.0 | 597 |
| Msa0099030 | MtrunA17_Chr8g0361931 | 75.309 | 81 | 20 | 0 | 1 | 81 | 364 | 444 | 3.95e-33 | 132 |
| Msa0099030 | MtrunA17_Chr1g0151371 | 75.766 | 359 | 83 | 1 | 149 | 507 | 7 | 361 | 0.0 | 561 |
| Msa0099030 | MtrunA17_Chr1g0151381 | 89.552 | 67 | 6 | 1 | 82 | 147 | 73 | 139 | 8.17e-34 | 126 |
| Msa0099030 | MtrunA17_Chr1g0151361 | 68.056 | 72 | 22 | 1 | 88 | 158 | 205 | 276 | 4.36e-20 | 90.9 |
| Msa0099030 | MtrunA17_Chr5g0419651 | 36.111 | 72 | 45 | 1 | 156 | 226 | 9 | 80 | 1.75e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099030 | AT3G61580.1 | 63.964 | 444 | 160 | 0 | 151 | 594 | 6 | 449 | 0.0 | 616 |
| Msa0099030 | AT3G61580.1 | 70.370 | 81 | 24 | 0 | 1 | 81 | 364 | 444 | 4.91e-33 | 132 |
| Msa0099030 | AT2G46210.1 | 62.864 | 447 | 166 | 0 | 148 | 594 | 3 | 449 | 0.0 | 616 |
| Msa0099030 | AT2G46210.1 | 72.840 | 81 | 22 | 0 | 1 | 81 | 364 | 444 | 3.81e-34 | 135 |
| Msa0099030 | AT1G26340.1 | 42.857 | 70 | 39 | 1 | 156 | 224 | 9 | 78 | 6.12e-12 | 63.9 |
Find 144 sgRNAs with CRISPR-Local
Find 655 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACAATTGTGTGTCTTTC+TGG | 0.051765 | 1_3:-5057908 | Msa0099030:CDS |
| CGATTCCGAGAAATTTAATT+TGG | 0.111749 | 1_3:-5068930 | Msa0099030:CDS |
| CTTATAATTGCGTGTCTTTC+TGG | 0.115276 | 1_3:-5069020 | Msa0099030:CDS |
| ATGTTCTTTGTCAGTGTTTA+TGG | 0.122801 | 1_3:-5058752 | Msa0099030:CDS |
| TGGTTTCTTGTTTACCTAAT+TGG | 0.140709 | 1_3:-5058223 | Msa0099030:CDS |
| CAGTTTATGCAGATTCTTTC+TGG | 0.150958 | 1_3:-5058599 | Msa0099030:CDS |
| GCGTTAGTGCACGTGCTTTC+TGG | 0.174585 | 1_3:-5058710 | Msa0099030:CDS |
| GCATAAACTGATTCCATTTC+CGG | 0.178406 | 1_3:+5058612 | None:intergenic |
| GAGGATTAATGGGTCTTCTT+TGG | 0.243891 | 1_3:-5058688 | Msa0099030:CDS |
| GGTTTCTTGTTTACCTAATT+GGG | 0.245592 | 1_3:-5058222 | Msa0099030:CDS |
| TCTTGGATGGATTGGTTTCA+TGG | 0.255282 | 1_3:-5058038 | Msa0099030:CDS |
| TCTTGGATGGATTGGTTTCA+TGG | 0.255282 | 1_3:-5069150 | None:intergenic |
| TTTGAGGAATGCGGCTTTGC+AGG | 0.255426 | 1_3:-5057859 | Msa0099030:CDS |
| CGTGCTTTCTGGAGGATTAA+TGG | 0.261392 | 1_3:-5058699 | Msa0099030:CDS |
| CTTTCTGGTAATGTTCTTGC+TGG | 0.262893 | 1_3:-5058584 | Msa0099030:CDS |
| TTGATGTGAAGTGTTCTTCT+TGG | 0.272066 | 1_3:-5058055 | Msa0099030:CDS |
| CTGGGTTTGTTCGAAGAAAA+AGG | 0.274037 | 1_3:-5058812 | Msa0099030:CDS |
| AAAGAACATAACAGAAATTA+TGG | 0.280581 | 1_3:+5058766 | None:intergenic |
| TCATGATTCTGGTCATTATC+AGG | 0.288041 | 1_3:-5058645 | Msa0099030:CDS |
| GGTTGGATTGGTCATGATTC+TGG | 0.304792 | 1_3:-5058656 | Msa0099030:CDS |
| AGATCTACGACGTTTCAAAA+TGG | 0.310327 | 1_3:-5059030 | Msa0099030:CDS |
| CGGTTCCGAGAAATTTAGTT+TGG | 0.314806 | 1_3:-5057818 | Msa0099030:CDS |
| AACTGCCAGTGGCAAAGTTT+TGG | 0.314883 | 1_3:+5058903 | None:intergenic |
| CAGAAAGACACGCAATTATA+AGG | 0.319932 | 1_3:+5069021 | None:intergenic |
| CATAAACTGCGCATCATAGA+AGG | 0.328530 | 1_3:-5066722 | Msa0099030:CDS |
| TTCTGGTCATTATCAGGTTA+TGG | 0.330574 | 1_3:-5058639 | Msa0099030:CDS |
| GCTTCCCAAATTAAATTTCT+CGG | 0.330951 | 1_3:+5068925 | None:intergenic |
| AAAACCCTCTCACCCCAATT+AGG | 0.338161 | 1_3:+5058209 | None:intergenic |
| AAAAGTTCCATCTTTCTATT+AGG | 0.338194 | 1_3:+5058281 | None:intergenic |
| ACATCCAAGTAGACACGATT+TGG | 0.362567 | 1_3:-5066611 | Msa0099030:intron |
| TTTCTCCGAACTAACCAAAC+TGG | 0.365435 | 1_3:-5058831 | Msa0099030:CDS |
| GTGCTTTCTGGAGGATTAAT+GGG | 0.367934 | 1_3:-5058698 | Msa0099030:CDS |
| TTTGAGGAAGATTTCGCCTT+TGG | 0.369780 | 1_3:-5057961 | Msa0099030:CDS |
| GAAAGTCTCGCCTTTGGTTA+AGG | 0.371815 | 1_3:-5069067 | Msa0099030:CDS |
| TGCTTACTATTCAGACTTTG+AGG | 0.372522 | 1_3:-5057875 | Msa0099030:CDS |
| GAAGATTTCGCCTTTGGTTA+AGG | 0.373280 | 1_3:-5057955 | Msa0099030:CDS |
| TTCTTTGGATTCAAAGTGGT+TGG | 0.376121 | 1_3:-5058673 | Msa0099030:CDS |
| TTCTTCGAACAAACCCAGTT+TGG | 0.378932 | 1_3:+5058817 | None:intergenic |
| AGGTTATGGTTAACCGGAAA+TGG | 0.379608 | 1_3:-5058625 | Msa0099030:CDS |
| CAAACCCAGTTTGGTTAGTT+CGG | 0.383963 | 1_3:+5058826 | None:intergenic |
| GTCCACCGACGGCTCATGAT+TGG | 0.391021 | 1_3:-5058103 | Msa0099030:CDS |
| CAAATTAAATTTCTCGGAAT+CGG | 0.394288 | 1_3:+5068931 | None:intergenic |
| GTCGTAGATCTTGCCGTCAA+TGG | 0.400669 | 1_3:+5059042 | None:intergenic |
| GTTTGGTTAGTTCGGAGAAA+AGG | 0.402748 | 1_3:+5058834 | None:intergenic |
| GGCTACCTCGGTGTAGTCTA+AGG | 0.404877 | 1_3:-5069089 | Msa0099030:CDS |
| AGTCTCCTTCTTGGATGGAT+TGG | 0.406129 | 1_3:-5069158 | None:intergenic |
| TAAGCATTGAATGGTGGAAA+TGG | 0.406654 | 1_3:-5058559 | Msa0099030:CDS |
| AATGGTAAATGTTGAAGATC+AGG | 0.410263 | 1_3:+5058491 | None:intergenic |
| GCTTCCCAAACTAAATTTCT+CGG | 0.412040 | 1_3:+5057813 | None:intergenic |
| ATTATCAGGTTATGGTTAAC+CGG | 0.413560 | 1_3:-5058631 | Msa0099030:CDS |
| TTGGATTTGGTACCCTTTGT+TGG | 0.423243 | 1_3:-5058243 | Msa0099030:CDS |
| CTTAGTTGTGGAATTTATCA+AGG | 0.423928 | 1_3:-5066657 | Msa0099030:CDS |
| ATCTGTTTCCGCGGCTACCT+CGG | 0.427424 | 1_3:-5069101 | Msa0099030:CDS |
| CAAACTAAATTTCTCGGAAC+CGG | 0.433414 | 1_3:+5057819 | None:intergenic |
| AGTGTTCTTCTTGGATGGAT+TGG | 0.433868 | 1_3:-5058046 | Msa0099030:CDS |
| GATTCCGAGAAATTTAATTT+GGG | 0.446329 | 1_3:-5068929 | Msa0099030:CDS |
| GGAATGCTGCTTTGCAAGCT+CGG | 0.448095 | 1_3:-5068966 | Msa0099030:CDS |
| TTTGGTTAGTTCGGAGAAAA+GGG | 0.451322 | 1_3:+5058835 | None:intergenic |
| CATCTTGGCCGGCGAGGTTG+AGG | 0.457435 | 1_3:+5058975 | None:intergenic |
| GATCTACGACGTTTCAAAAT+GGG | 0.459792 | 1_3:-5059029 | Msa0099030:CDS |
| CAGAAAGACACACAATTGTA+AGG | 0.461532 | 1_3:+5057909 | None:intergenic |
| GTCTTCCACGGTGTAATTTG+AGG | 0.464009 | 1_3:-5057977 | Msa0099030:CDS |
| GGCAAGGGATCTTACTAAAC+CGG | 0.465661 | 1_3:-5057838 | Msa0099030:CDS |
| TGTGAAGTGTTCTTCTTGGA+TGG | 0.468484 | 1_3:-5058051 | Msa0099030:CDS |
| TCTTGGTCAGTTACCAGCAT+TGG | 0.468669 | 1_3:-5058385 | Msa0099030:CDS |
| TGGGAAGCTGTTAATACTCA+TGG | 0.473340 | 1_3:-5057798 | Msa0099030:CDS |
| TCTAAGGAAAGTCTCGCCTT+TGG | 0.473776 | 1_3:-5069073 | Msa0099030:CDS |
| TGGATTCAAAGTGGTTGGAT+TGG | 0.479141 | 1_3:-5058668 | Msa0099030:CDS |
| CTCGCCGCCGGGATGGTGGT+TGG | 0.480612 | 1_3:+5059006 | None:intergenic |
| ATTTGTTTCCGCGTCTTCCA+CGG | 0.485220 | 1_3:-5057989 | Msa0099030:CDS |
| TGCGGGTATAGTTTCATCCA+TGG | 0.486447 | 1_3:+5066778 | None:intergenic |
| GGAATGCATCAGTGACATCT+TGG | 0.491255 | 1_3:+5058960 | None:intergenic |
| GAGATAAACCTTTCCATTCA+CGG | 0.491318 | 1_3:-5066583 | Msa0099030:intron |
| CGTCTGAATGGTAAGTAGAT+TGG | 0.492566 | 1_3:+5068993 | None:intergenic |
| GGTTCCGAGAAATTTAGTTT+GGG | 0.492737 | 1_3:-5057817 | Msa0099030:CDS |
| GTTTCTTGTTTACCTAATTG+GGG | 0.497767 | 1_3:-5058221 | Msa0099030:CDS |
| GTTTACCTAATTGGGGTGAG+AGG | 0.499023 | 1_3:-5058214 | Msa0099030:CDS |
| TTTACCTAATTGGGGTGAGA+GGG | 0.503473 | 1_3:-5058213 | Msa0099030:CDS |
| GAGGAGAGGAAGCTCGCCGC+CGG | 0.506758 | 1_3:+5058994 | None:intergenic |
| TGGTTTGAGAAGCAAGCTCA+TGG | 0.509660 | 1_3:-5058083 | Msa0099030:CDS |
| AAAAGTGCCTAATAGAAAGA+TGG | 0.513187 | 1_3:-5058288 | Msa0099030:CDS |
| GCGAGGACTAGAACCGTGAA+TGG | 0.513821 | 1_3:+5066570 | None:intergenic |
| GAATGCTGCTTTGCAAGCTC+GGG | 0.516848 | 1_3:-5068965 | Msa0099030:CDS |
| GAAGCTCGCCGCCGGGATGG+TGG | 0.525178 | 1_3:+5059002 | None:intergenic |
| CAATTGTGTGTCTTTCTGGA+AGG | 0.526261 | 1_3:-5057904 | Msa0099030:CDS |
| AACTCTAAAGCATCTTCTGC+GGG | 0.527388 | 1_3:+5066761 | None:intergenic |
| CAGGATAATAACTCCAATGC+TGG | 0.530353 | 1_3:+5058372 | None:intergenic |
| TGTTGACAGTTCAGAATCCA+TGG | 0.537906 | 1_3:-5066795 | Msa0099030:CDS |
| AGCATTCCTCAACGTCTGAA+TGG | 0.538587 | 1_3:+5068981 | None:intergenic |
| GGAATGCGGCTTTGCAGGCA+AGG | 0.538823 | 1_3:-5057854 | Msa0099030:CDS |
| TGCATCAGTGACATCTTGGC+CGG | 0.539741 | 1_3:+5058964 | None:intergenic |
| TTCTCCGAACTAACCAAACT+GGG | 0.542349 | 1_3:-5058830 | Msa0099030:CDS |
| TGAATTGACAAGCTTAGTTG+TGG | 0.543500 | 1_3:-5066669 | Msa0099030:CDS |
| ACAACACTCGCGGCGATGCA+TGG | 0.546353 | 1_3:-5059069 | Msa0099030:CDS |
| CTGCGCATCATAGAAGGGGC+TGG | 0.549088 | 1_3:-5066716 | Msa0099030:CDS |
| ATAAACTGCGCATCATAGAA+GGG | 0.549312 | 1_3:-5066721 | Msa0099030:CDS |
| TTGCTGGTATAAGCATTGAA+TGG | 0.551437 | 1_3:-5058568 | Msa0099030:CDS |
| GAGGAAGCTCGCCGCCGGGA+TGG | 0.553344 | 1_3:+5058999 | None:intergenic |
| AAATGGGCCAACCACCATCC+CGG | 0.554203 | 1_3:-5059013 | Msa0099030:CDS |
| GTCTGTAAGCGGATGGAGGG+TGG | 0.555473 | 1_3:+5058930 | None:intergenic |
| GTAAACAAGAAACCAACAAA+GGG | 0.556044 | 1_3:+5058231 | None:intergenic |
| TAATTGCGTGTCTTTCTGGA+AGG | 0.560208 | 1_3:-5069016 | Msa0099030:CDS |
| AGGAGAGGAAGCTCGCCGCC+GGG | 0.564363 | 1_3:+5058995 | None:intergenic |
| CAAGACTATTACAAGCAAGA+TGG | 0.565814 | 1_3:+5058522 | None:intergenic |
| AAGACACACAATTGTAAGGA+AGG | 0.570281 | 1_3:+5057913 | None:intergenic |
| TGTTTATGTTGGTCCACCGA+CGG | 0.571686 | 1_3:-5058114 | Msa0099030:CDS |
| CATCTCCAAAACTTTGCCAC+TGG | 0.575527 | 1_3:-5058908 | Msa0099030:CDS |
| TGGAGATGTCTGTAAGCGGA+TGG | 0.578065 | 1_3:+5058923 | None:intergenic |
| AAGTAGACACGATTTGGAAG+AGG | 0.578521 | 1_3:-5066605 | Msa0099030:intron |
| TATTCAGACTTTGAGGAATG+CGG | 0.578567 | 1_3:-5057868 | Msa0099030:CDS |
| TTGCACAGATCCTTAACCAA+AGG | 0.578750 | 1_3:+5069057 | None:intergenic |
| TTGCACAGATCCTTAACCAA+AGG | 0.580004 | 1_3:+5057945 | None:intergenic |
| GATGCATGGATCTCCATTGA+CGG | 0.586989 | 1_3:-5059055 | Msa0099030:CDS |
| TACTTACCATTCAGACGTTG+AGG | 0.590398 | 1_3:-5068987 | Msa0099030:CDS |
| AAGACACGCAATTATAAGGA+AGG | 0.591285 | 1_3:+5069025 | None:intergenic |
| CTTCCTCTCCTCAACCTCGC+CGG | 0.591399 | 1_3:-5058983 | Msa0099030:CDS |
| AACCAATCATGAGCCGTCGG+TGG | 0.594561 | 1_3:+5058101 | None:intergenic |
| AGCCTAGCAAAACACATCAC+AGG | 0.594917 | 1_3:+5058353 | None:intergenic |
| AAATTACACCGTGGAAGACG+CGG | 0.594958 | 1_3:+5057981 | None:intergenic |
| GAGGTAGCCGCGGAAACAGA+TGG | 0.597433 | 1_3:+5069103 | None:intergenic |
| CGGATGGAGGGTGGAAAGCG+AGG | 0.606786 | 1_3:+5058939 | None:intergenic |
| GATGTCTGTAAGCGGATGGA+GGG | 0.608266 | 1_3:+5058927 | None:intergenic |
| TTAGTGCACGTGCTTTCTGG+AGG | 0.608555 | 1_3:-5058707 | Msa0099030:CDS |
| GACTAGAACCGTGAATGGAA+AGG | 0.613325 | 1_3:+5066575 | None:intergenic |
| GGTAAACAAGAAACCAACAA+AGG | 0.615111 | 1_3:+5058230 | None:intergenic |
| GAATGCGGCTTTGCAGGCAA+GGG | 0.625318 | 1_3:-5057853 | Msa0099030:CDS |
| GGTCTTCTTTGGATTCAAAG+TGG | 0.627395 | 1_3:-5058677 | Msa0099030:CDS |
| TTGAACACCATCTGTTTCCG+CGG | 0.627778 | 1_3:-5069110 | Msa0099030:CDS |
| TCAAACCAATCATGAGCCGT+CGG | 0.628168 | 1_3:+5058098 | None:intergenic |
| CAGTGACATCTTGGCCGGCG+AGG | 0.636188 | 1_3:+5058969 | None:intergenic |
| AAACTCTAAAGCATCTTCTG+CGG | 0.642659 | 1_3:+5066760 | None:intergenic |
| TAAACTGCGCATCATAGAAG+GGG | 0.651146 | 1_3:-5066720 | Msa0099030:CDS |
| CTGGTATAAGCATTGAATGG+TGG | 0.657971 | 1_3:-5058565 | Msa0099030:CDS |
| TATCAAGGTTAATAATGACA+AGG | 0.658895 | 1_3:-5066642 | Msa0099030:CDS |
| AGATGTCTGTAAGCGGATGG+AGG | 0.661041 | 1_3:+5058926 | None:intergenic |
| AGACTACACCGAGGTAGCCG+CGG | 0.665511 | 1_3:+5069093 | None:intergenic |
| TGGATGGATTGGTTTCATGG+TGG | 0.679425 | 1_3:-5069147 | Msa0099030:CDS |
| TGGATGGATTGGTTTCATGG+TGG | 0.682579 | 1_3:-5058035 | Msa0099030:CDS |
| GTCACGTAGGTAACTGCCAG+TGG | 0.687851 | 1_3:+5058892 | None:intergenic |
| TGGCCGGCGAGGTTGAGGAG+AGG | 0.689110 | 1_3:+5058980 | None:intergenic |
| CAGAGACGACGTAGTCACGT+AGG | 0.725034 | 1_3:+5058879 | None:intergenic |
| TGGGCCAACCACCATCCCGG+CGG | 0.736027 | 1_3:-5059010 | Msa0099030:CDS |
| ATCTTCCTCAAATTACACCG+TGG | 0.747566 | 1_3:+5057972 | None:intergenic |
| ACTTTCCTTAGACTACACCG+AGG | 0.848048 | 1_3:+5069084 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATTTAATATT+TGG | + | chr1_3:5064150-5064169 | None:intergenic | 0.0% |
| !!! | AATAAAAAATTAAAATTTTA+AGG | - | chr1_3:5066205-5066224 | Msa0099030:intron | 0.0% |
| !! | AAAAATAAAAATAAATAAAA+TGG | - | chr1_3:5067620-5067639 | Msa0099030:intron | 0.0% |
| !!! | TTTTTGTTATTTTATAAAAC+AGG | + | chr1_3:5058970-5058989 | None:intergenic | 10.0% |
| !!! | TCATAAAATTTGAAATTAAA+CGG | - | chr1_3:5060065-5060084 | Msa0099030:intron | 10.0% |
| !! | TTAAAAAGAAAAATAAAAGA+AGG | - | chr1_3:5061229-5061248 | Msa0099030:intron | 10.0% |
| !! | ATAATTTACTTTAAATACTA+AGG | - | chr1_3:5062051-5062070 | Msa0099030:intron | 10.0% |
| !!! | TTCAAATTTCAAATTTTAAT+TGG | + | chr1_3:5062664-5062683 | None:intergenic | 10.0% |
| !!! | TTATTTAAAATATCCAAAAA+CGG | + | chr1_3:5062727-5062746 | None:intergenic | 10.0% |
| !!! | TCTTTTTTAAAAAAAAAACA+CGG | + | chr1_3:5063373-5063392 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAAAAAGACTTA+CGG | - | chr1_3:5063377-5063396 | Msa0099030:intron | 10.0% |
| !! | AAATTTAATACAAAAATCAA+TGG | + | chr1_3:5063622-5063641 | None:intergenic | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | - | chr1_3:5064568-5064587 | Msa0099030:intron | 10.0% |
| !!! | TTTATCATTGTTTTTTTTAA+TGG | - | chr1_3:5064960-5064979 | Msa0099030:intron | 10.0% |
| !! | TCTAAATATAAAAATATCAA+AGG | - | chr1_3:5065559-5065578 | Msa0099030:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr1_3:5065875-5065894 | Msa0099030:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr1_3:5065876-5065895 | Msa0099030:intron | 10.0% |
| !! | TTAAAAACAAATATATTTGA+AGG | + | chr1_3:5066502-5066521 | None:intergenic | 10.0% |
| !! | TAATCAATAAATTTAATGAT+GGG | + | chr1_3:5067109-5067128 | None:intergenic | 10.0% |
| !! | ATAATCAATAAATTTAATGA+TGG | + | chr1_3:5067110-5067129 | None:intergenic | 10.0% |
| !!! | AAAAATTACTTTTATTTTTG+GGG | + | chr1_3:5067583-5067602 | None:intergenic | 10.0% |
| !! | ATAAAAATAAATAAAATGGT+AGG | - | chr1_3:5067624-5067643 | Msa0099030:intron | 10.0% |
| !! | TAAAAATAAATAAAATGGTA+GGG | - | chr1_3:5067625-5067644 | Msa0099030:intron | 10.0% |
| !!! | TTTTATAATTGGAACTTATA+TGG | - | chr1_3:5058535-5058554 | Msa0099030:CDS | 15.0% |
| !!! | ACTTCTATTTTTAATAAACT+TGG | - | chr1_3:5058843-5058862 | Msa0099030:CDS | 15.0% |
| !! | TAATTACATATTTCTCATTA+TGG | + | chr1_3:5059133-5059152 | None:intergenic | 15.0% |
| !!! | CTCAAAATAAAATATTTTTG+AGG | + | chr1_3:5059360-5059379 | None:intergenic | 15.0% |
| !!! | TTACTTTTTGTTTATTTCAT+TGG | - | chr1_3:5059507-5059526 | Msa0099030:intron | 15.0% |
| !! | TTAAACAATTAAAACTTGAA+TGG | - | chr1_3:5061552-5061571 | Msa0099030:intron | 15.0% |
| !!! | AGTATTTTCTATAGATATAT+TGG | + | chr1_3:5061720-5061739 | None:intergenic | 15.0% |
| !! | TGATATATTTAACAATGATA+CGG | - | chr1_3:5062154-5062173 | Msa0099030:intron | 15.0% |
| !!! | TAAATTTAAATAACCGTTTT+TGG | - | chr1_3:5062711-5062730 | Msa0099030:intron | 15.0% |
| !! | AAAATAATAACTTCAAGAAA+GGG | - | chr1_3:5062893-5062912 | Msa0099030:intron | 15.0% |
| !! | TTAAAAAACTAAATCTTCAA+TGG | - | chr1_3:5062995-5063014 | Msa0099030:intron | 15.0% |
| !!! | ATGAACTGTTTTTAAAATAA+CGG | - | chr1_3:5063067-5063086 | Msa0099030:intron | 15.0% |
| !!! | TATTTTGTATTTTAGGATAA+TGG | - | chr1_3:5064015-5064034 | Msa0099030:intron | 15.0% |
| !! | CATTTATGTTATCTTAAAAA+CGG | + | chr1_3:5064752-5064771 | None:intergenic | 15.0% |
| !! | GTTATCTTAAAAAAAAAAGT+AGG | + | chr1_3:5065187-5065206 | None:intergenic | 15.0% |
| !!! | ATTGTTTTCAAATTTTAGAT+GGG | + | chr1_3:5065262-5065281 | None:intergenic | 15.0% |
| !!! | AATTGTTTTCAAATTTTAGA+TGG | + | chr1_3:5065263-5065282 | None:intergenic | 15.0% |
| !!! | TTTTAATGCACATATTTAAA+AGG | - | chr1_3:5065355-5065374 | Msa0099030:intron | 15.0% |
| !! | TCTCAAAATTTATAGAAATT+TGG | + | chr1_3:5065626-5065645 | None:intergenic | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | + | chr1_3:5065840-5065859 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr1_3:5065877-5065896 | Msa0099030:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr1_3:5065940-5065959 | Msa0099030:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr1_3:5065941-5065960 | Msa0099030:intron | 15.0% |
| !!! | TTTTTTATACAACTATTGAT+TGG | + | chr1_3:5066433-5066452 | None:intergenic | 15.0% |
| !!! | TTTCTATATCACTATTTTTT+TGG | + | chr1_3:5066569-5066588 | None:intergenic | 15.0% |
| !! | TGAATATTACCAAAAATAAA+AGG | - | chr1_3:5066592-5066611 | Msa0099030:CDS | 15.0% |
| !! | TTATCTATACAAAACATTTA+AGG | - | chr1_3:5067291-5067310 | Msa0099030:intron | 15.0% |
| !! | AAAACATTTAAGGAATTTAA+AGG | - | chr1_3:5067301-5067320 | Msa0099030:intron | 15.0% |
| !!! | ACAGACAATACTTTTATAAT+TGG | - | chr1_3:5058524-5058543 | Msa0099030:CDS | 20.0% |
| !! | GCATTCAATATTATAAAAAC+TGG | + | chr1_3:5058905-5058924 | None:intergenic | 20.0% |
| !! | ATGCATAAACAATTTAAACT+TGG | - | chr1_3:5058921-5058940 | Msa0099030:CDS | 20.0% |
| !!! | TATGTAATTACGCAATTTTT+TGG | - | chr1_3:5059143-5059162 | Msa0099030:intron | 20.0% |
| !!! | TTTGAAACTGAATTTTGTAA+TGG | - | chr1_3:5059209-5059228 | Msa0099030:intron | 20.0% |
| !! | TATTGAGAGACTTTATTAAA+GGG | + | chr1_3:5059336-5059355 | None:intergenic | 20.0% |
| !! | ATATTGAGAGACTTTATTAA+AGG | + | chr1_3:5059337-5059356 | None:intergenic | 20.0% |
| !!! | AATATTTTATTTTGAGTGCA+TGG | - | chr1_3:5059364-5059383 | Msa0099030:intron | 20.0% |
| !!! | ATATTTTATTTTGAGTGCAT+GGG | - | chr1_3:5059365-5059384 | Msa0099030:intron | 20.0% |
| !! | ATCAATCCTTACAAATAAAA+AGG | - | chr1_3:5060420-5060439 | Msa0099030:intron | 20.0% |
| !! | CATATTTATCATACTAAAGT+AGG | + | chr1_3:5060839-5060858 | None:intergenic | 20.0% |
| !! | ATAAATATGTTACTAAAAGC+AGG | - | chr1_3:5060850-5060869 | Msa0099030:intron | 20.0% |
| !! | GCACATTCTATTTAAAAAAA+TGG | - | chr1_3:5061088-5061107 | Msa0099030:intron | 20.0% |
| !!! | TCTTTAAAAAAAATGTCAGT+AGG | - | chr1_3:5061865-5061884 | Msa0099030:intron | 20.0% |
| !!! | TTTTTTTTTTAAGGAGTGTT+TGG | + | chr1_3:5062212-5062231 | None:intergenic | 20.0% |
| !! | TTCTTGTCACTAATAAAAAA+CGG | + | chr1_3:5062750-5062769 | None:intergenic | 20.0% |
| !! | TGAATATAGAACAAAAAACT+AGG | - | chr1_3:5062849-5062868 | Msa0099030:intron | 20.0% |
| !! | GAAAATAATAACTTCAAGAA+AGG | - | chr1_3:5062892-5062911 | Msa0099030:intron | 20.0% |
| !!! | AGATTTAGTTTTTTAAACCT+GGG | + | chr1_3:5062991-5063010 | None:intergenic | 20.0% |
| !!! | AAGATTTAGTTTTTTAAACC+TGG | + | chr1_3:5062992-5063011 | None:intergenic | 20.0% |
| !!! | ATAACATATATTTGCTATCA+CGG | - | chr1_3:5063326-5063345 | Msa0099030:intron | 20.0% |
| !!! | ATTTGTTTAGTTCTAATTCT+GGG | - | chr1_3:5063467-5063486 | Msa0099030:intron | 20.0% |
| !! | AACTCAAAAAATGATTCTAA+AGG | - | chr1_3:5063494-5063513 | Msa0099030:intron | 20.0% |
| !!! | GATTATCAAAAATTGATTCT+AGG | + | chr1_3:5063711-5063730 | None:intergenic | 20.0% |
| !! | AACTCAAAAAAGAAAAAACA+AGG | + | chr1_3:5063994-5064013 | None:intergenic | 20.0% |
| !!! | TGAGTTCTATTTTGTATTTT+AGG | - | chr1_3:5064008-5064027 | Msa0099030:intron | 20.0% |
| !! | ACATTTCATTTATCTTTCTT+TGG | - | chr1_3:5064304-5064323 | Msa0099030:intron | 20.0% |
| !!! | TTTTTGAAATTTTTCCGTAT+CGG | - | chr1_3:5064661-5064680 | Msa0099030:intron | 20.0% |
| !! | TACAGAATATACAAAACATT+CGG | - | chr1_3:5065018-5065037 | Msa0099030:intron | 20.0% |
| !! | TAGAGAGAAAATCTATTTAA+TGG | + | chr1_3:5065125-5065144 | None:intergenic | 20.0% |
| !!! | AAATAGATTTTCTCTCTAAA+TGG | - | chr1_3:5065127-5065146 | Msa0099030:intron | 20.0% |
| !!! | CAAATGTCAAATTGTTTTTT+TGG | + | chr1_3:5065299-5065318 | None:intergenic | 20.0% |
| !! | CAAAAAAACAATTTGACATT+TGG | - | chr1_3:5065297-5065316 | Msa0099030:intron | 20.0% |
| !! | ATATCAAAGGAAATACATTA+AGG | - | chr1_3:5065572-5065591 | Msa0099030:intron | 20.0% |
| !! | TATCAAAGGAAATACATTAA+GGG | - | chr1_3:5065573-5065592 | Msa0099030:intron | 20.0% |
| !!! | CTCTAAAATATAGTAATGTA+CGG | + | chr1_3:5065747-5065766 | None:intergenic | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | + | chr1_3:5065841-5065860 | None:intergenic | 20.0% |
| !! | GAAAATGGAATATATTGTAT+TGG | - | chr1_3:5065899-5065918 | Msa0099030:intron | 20.0% |
| !! | TATTGAAAATTGAAATGAGT+CGG | - | chr1_3:5065978-5065997 | Msa0099030:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr1_3:5066010-5066029 | Msa0099030:intron | 20.0% |
| !!! | TAATCATCAGATTTTATTAG+AGG | - | chr1_3:5066246-5066265 | Msa0099030:intron | 20.0% |
| !!! | GGAATTAGTTTTTTTTTTTG+AGG | - | chr1_3:5066267-5066286 | Msa0099030:intron | 20.0% |
| !!! | TTTTTTTTTTGAGGAATTAG+AGG | - | chr1_3:5066276-5066295 | Msa0099030:intron | 20.0% |
| !! | CAATTTAGAAAATAGTTGAA+AGG | - | chr1_3:5066311-5066330 | Msa0099030:intron | 20.0% |
| !! | TATCACTATTTAATATCTGA+AGG | + | chr1_3:5066533-5066552 | None:intergenic | 20.0% |
| !!! | CAATTATTGCCTTTTATTTT+TGG | + | chr1_3:5066604-5066623 | None:intergenic | 20.0% |
| !!! | ATTTTCGAAACAATAATGAT+AGG | - | chr1_3:5066681-5066700 | Msa0099030:CDS | 20.0% |
| !!! | TTTTCGAAACAATAATGATA+GGG | - | chr1_3:5066682-5066701 | Msa0099030:CDS | 20.0% |
| !!! | TTTCTCATTTTCAAAGTAAA+AGG | - | chr1_3:5067203-5067222 | Msa0099030:intron | 20.0% |
| !!! | TTCTCATTTTCAAAGTAAAA+GGG | - | chr1_3:5067204-5067223 | Msa0099030:intron | 20.0% |
| !! | TATTAATATTAGTAGTTTCC+AGG | + | chr1_3:5067346-5067365 | None:intergenic | 20.0% |
| !!! | AATGATTTTGTGAATACATT+AGG | + | chr1_3:5067680-5067699 | None:intergenic | 20.0% |
| !! | AAAGAACATAACAGAAATTA+TGG | + | chr1_3:5068175-5068194 | None:intergenic | 20.0% |
| !!! | GTTTACTTTGAATCATTTTT+CGG | - | chr1_3:5068797-5068816 | Msa0099030:intron | 20.0% |
| ! | CAAATTAAATTTCTCGGAAT+CGG | + | chr1_3:5058010-5058029 | None:intergenic | 25.0% |
| !! | GATTCCGAGAAATTTAATTT+GGG | - | chr1_3:5058009-5058028 | Msa0099030:CDS | 25.0% |
| !! | TCCTAATATTTTTCTGTCAT+TGG | - | chr1_3:5058074-5058093 | Msa0099030:CDS | 25.0% |
| ! | TATAATTGGAACTTATATGG+TGG | - | chr1_3:5058538-5058557 | Msa0099030:CDS | 25.0% |
| ! | AGATGCGAAATTTATTTAGT+AGG | + | chr1_3:5058585-5058604 | None:intergenic | 25.0% |
| !!! | AACTGATTTGTGATAAGATT+TGG | + | chr1_3:5058720-5058739 | None:intergenic | 25.0% |
| !! | CGAATGTTATTTGAAATCTA+TGG | + | chr1_3:5058808-5058827 | None:intergenic | 25.0% |
| ! | CATAAACAATTTAAACTTGG+AGG | - | chr1_3:5058924-5058943 | Msa0099030:CDS | 25.0% |
| ! | AACTCATTATATTGTCTTCT+AGG | - | chr1_3:5059029-5059048 | Msa0099030:CDS | 25.0% |
| ! | ACTCATTATATTGTCTTCTA+GGG | - | chr1_3:5059030-5059049 | Msa0099030:CDS | 25.0% |
| ! | ACTTATAAGGGATATTTCAA+TGG | - | chr1_3:5059244-5059263 | Msa0099030:intron | 25.0% |
| ! | TCAAAATCTGTTACATTATG+AGG | + | chr1_3:5059291-5059310 | None:intergenic | 25.0% |
| ! | TAATGTTTGTCAGATATATC+TGG | - | chr1_3:5059620-5059639 | Msa0099030:intron | 25.0% |
| !! | TTGACAAATACCTTTTCTTA+TGG | - | chr1_3:5059928-5059947 | Msa0099030:intron | 25.0% |
| !! | AAATACCTTTTCTTATGGTA+GGG | - | chr1_3:5059933-5059952 | Msa0099030:intron | 25.0% |
| !!! | GATGGATTATAGTATTTAGA+CGG | + | chr1_3:5059977-5059996 | None:intergenic | 25.0% |
| ! | ACTTGATATATACTGAAACA+GGG | - | chr1_3:5060120-5060139 | Msa0099030:intron | 25.0% |
| ! | TATCAAGGTTAATAATGACA+AGG | - | chr1_3:5060296-5060315 | Msa0099030:intron | 25.0% |
| ! | TGTAAGGATTGATTAAAATG+AGG | + | chr1_3:5060413-5060432 | None:intergenic | 25.0% |
| !!! | GTATGTCCTTTTTATTTGTA+AGG | + | chr1_3:5060429-5060448 | None:intergenic | 25.0% |
| ! | AACAGACAATGTACAATTAT+TGG | + | chr1_3:5060470-5060489 | None:intergenic | 25.0% |
| !! | TTTTATCAATAATGCTGTCT+TGG | + | chr1_3:5060793-5060812 | None:intergenic | 25.0% |
| ! | TCATTATACCATAACACATA+AGG | - | chr1_3:5061260-5061279 | Msa0099030:intron | 25.0% |
| ! | TGAGTGAAGTTAAAATTGTA+CGG | - | chr1_3:5061408-5061427 | Msa0099030:intron | 25.0% |
| ! | TTAAAATGAGTTACTCCATT+TGG | + | chr1_3:5061536-5061555 | None:intergenic | 25.0% |
| !! | TCTTTCTATTCATCAAGTTT+TGG | + | chr1_3:5061578-5061597 | None:intergenic | 25.0% |
| ! | TTTGAACCATTTCAACATTT+CGG | + | chr1_3:5062541-5062560 | None:intergenic | 25.0% |
| !! | CAATTTTTACACCACAAAAA+TGG | - | chr1_3:5062934-5062953 | Msa0099030:intron | 25.0% |
| !!! | CTGTTTTTAAAATAACGGTT+CGG | - | chr1_3:5063072-5063091 | Msa0099030:intron | 25.0% |
| ! | AATTAACTGAACCATTACAT+TGG | + | chr1_3:5063106-5063125 | None:intergenic | 25.0% |
| !!! | TGGTTCAGTTAATTTTAGTT+TGG | - | chr1_3:5063112-5063131 | Msa0099030:intron | 25.0% |
| !!! | CAGTTAATTTTAGTTTGGTT+TGG | - | chr1_3:5063117-5063136 | Msa0099030:intron | 25.0% |
| !!! | AATTTTAGTTTGGTTTGGTT+CGG | - | chr1_3:5063122-5063141 | Msa0099030:intron | 25.0% |
| ! | AAATTTGGAAACGTTTCTTT+AGG | + | chr1_3:5063193-5063212 | None:intergenic | 25.0% |
| ! | ATAAGCAAACATTGGAAATT+TGG | + | chr1_3:5063208-5063227 | None:intergenic | 25.0% |
| !!! | CATTTGTTTAGTTCTAATTC+TGG | - | chr1_3:5063466-5063485 | Msa0099030:intron | 25.0% |
| ! | TTTGTGAAAATGTGGATTTA+AGG | + | chr1_3:5063647-5063666 | None:intergenic | 25.0% |
| ! | TAGATGTATTTGTGAAAATG+TGG | + | chr1_3:5063655-5063674 | None:intergenic | 25.0% |
| ! | TCAAAAAAGAAAAAACAAGG+AGG | + | chr1_3:5063991-5064010 | None:intergenic | 25.0% |
| ! | TTTAATATTTGGATACTCTC+CGG | + | chr1_3:5064139-5064158 | None:intergenic | 25.0% |
| !! | TTTCCCTTTCTAAGAAATTA+GGG | - | chr1_3:5064368-5064387 | Msa0099030:intron | 25.0% |
| ! | AAACCCTAATTTCTTAGAAA+GGG | + | chr1_3:5064374-5064393 | None:intergenic | 25.0% |
| ! | AATATTGACGATTAAGAGAA+TGG | + | chr1_3:5064497-5064516 | None:intergenic | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | + | chr1_3:5064648-5064667 | None:intergenic | 25.0% |
| ! | TGTTATCTTAAAAACGGAAT+TGG | + | chr1_3:5064746-5064765 | None:intergenic | 25.0% |
| ! | TAACCAAATGATTTATCTGT+GGG | + | chr1_3:5065090-5065109 | None:intergenic | 25.0% |
| ! | TACGAGTTTAGATAGTTAAT+GGG | + | chr1_3:5065327-5065346 | None:intergenic | 25.0% |
| ! | ATACGAGTTTAGATAGTTAA+TGG | + | chr1_3:5065328-5065347 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | - | chr1_3:5065884-5065903 | Msa0099030:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr1_3:5066009-5066028 | Msa0099030:intron | 25.0% |
| !!! | TTTTTTAGCAAAGACATTGA+TGG | - | chr1_3:5066120-5066139 | Msa0099030:intron | 25.0% |
| ! | TCCTTGACTCAAATAATTAT+CGG | + | chr1_3:5066351-5066370 | None:intergenic | 25.0% |
| ! | TCATTAATGAGATTCAACTA+AGG | + | chr1_3:5066403-5066422 | None:intergenic | 25.0% |
| ! | TTTCGAAACAATAATGATAG+GGG | - | chr1_3:5066683-5066702 | Msa0099030:CDS | 25.0% |
| ! | CCTTCAAAAAAAAAATGAGA+GGG | - | chr1_3:5066706-5066725 | Msa0099030:CDS | 25.0% |
| ! | TTCTGATATTCTAATGAATG+TGG | + | chr1_3:5066789-5066808 | None:intergenic | 25.0% |
| ! | AAGACTACATACATCATTTA+AGG | + | chr1_3:5066980-5066999 | None:intergenic | 25.0% |
| ! | AAATGAGAAACTAATGATTG+TGG | + | chr1_3:5067193-5067212 | None:intergenic | 25.0% |
| !!! | GAAAGAACCATATTTTTACT+TGG | + | chr1_3:5067269-5067288 | None:intergenic | 25.0% |
| !! | AATTTAAAGGCGAAGATTTT+GGG | - | chr1_3:5067314-5067333 | Msa0099030:intron | 25.0% |
| !! | ATTTTGTGAATACATTAGGT+GGG | + | chr1_3:5067676-5067695 | None:intergenic | 25.0% |
| ! | AGAATGAATGAATGAAAGAA+GGG | + | chr1_3:5067762-5067781 | None:intergenic | 25.0% |
| ! | AAGAATGAATGAATGAAAGA+AGG | + | chr1_3:5067763-5067782 | None:intergenic | 25.0% |
| ! | AAGTTCTTGTAATGAAATGT+AGG | + | chr1_3:5067842-5067861 | None:intergenic | 25.0% |
| !!! | TGAATTTTGATTCTTTTGCT+AGG | - | chr1_3:5068529-5068548 | Msa0099030:intron | 25.0% |
| ! | AAAAGTTCCATCTTTCTATT+AGG | + | chr1_3:5068660-5068679 | None:intergenic | 25.0% |
| !! | AATAGAAAGATGGAACTTTT+AGG | - | chr1_3:5068660-5068679 | Msa0099030:intron | 25.0% |
| !! | ATAGAAAGATGGAACTTTTA+GGG | - | chr1_3:5068661-5068680 | Msa0099030:intron | 25.0% |
| CGATTCCGAGAAATTTAATT+TGG | - | chr1_3:5058008-5058027 | Msa0099030:CDS | 30.0% | |
| GCTTCCCAAATTAAATTTCT+CGG | + | chr1_3:5058016-5058035 | None:intergenic | 30.0% | |
| GCCAATGACAGAAAAATATT+AGG | + | chr1_3:5058078-5058097 | None:intergenic | 30.0% | |
| ! | TTTTTCTGTCATTGGCATTT+TGG | - | chr1_3:5058082-5058101 | Msa0099030:CDS | 30.0% |
| !! | ATTGGCATTTTGGTAATCAT+TGG | - | chr1_3:5058092-5058111 | Msa0099030:CDS | 30.0% |
| TTTCTTACCTATCTCTTGAA+AGG | + | chr1_3:5058163-5058182 | None:intergenic | 30.0% | |
| AAGAAAGAAACTACTGATAC+TGG | - | chr1_3:5058177-5058196 | Msa0099030:CDS | 30.0% | |
| TAACAATTTGTGTTATGCCT+TGG | - | chr1_3:5058323-5058342 | Msa0099030:CDS | 30.0% | |
| !!! | GTTTTTTTCTTTCCATTTCC+TGG | - | chr1_3:5058414-5058433 | Msa0099030:CDS | 30.0% |
| AATAACATTCGTTCCATTCA+TGG | - | chr1_3:5058817-5058836 | Msa0099030:CDS | 30.0% | |
| AAATAGAAGTAAGCCATGAA+TGG | + | chr1_3:5058833-5058852 | None:intergenic | 30.0% | |
| ACAATTTAAACTTGGAGGTA+AGG | - | chr1_3:5058929-5058948 | Msa0099030:CDS | 30.0% | |
| TTGGAGGTAAGGTAATATAA+GGG | - | chr1_3:5058940-5058959 | Msa0099030:CDS | 30.0% | |
| !!! | CAATTTTTTGGTCGTAGTAA+AGG | - | chr1_3:5059155-5059174 | Msa0099030:intron | 30.0% |
| ACTGAACAGACAACTTATAA+GGG | - | chr1_3:5059232-5059251 | Msa0099030:intron | 30.0% | |
| !!! | TTTTTTGCTGAGAAGAACTA+TGG | - | chr1_3:5059460-5059479 | Msa0099030:intron | 30.0% |
| !!! | TGGGTGAATTGTTTTTACAA+AGG | - | chr1_3:5059678-5059697 | Msa0099030:intron | 30.0% |
| TGTCTATCATCTATCATTTG+TGG | - | chr1_3:5059764-5059783 | Msa0099030:intron | 30.0% | |
| TTACACAAATCAGCATATCT+TGG | - | chr1_3:5059788-5059807 | Msa0099030:intron | 30.0% | |
| ! | CAAATACCTTTTCTTATGGT+AGG | - | chr1_3:5059932-5059951 | Msa0099030:intron | 30.0% |
| CACTTGATATATACTGAAAC+AGG | - | chr1_3:5060119-5060138 | Msa0099030:intron | 30.0% | |
| CTTAGTTGTGGAATTTATCA+AGG | - | chr1_3:5060281-5060300 | Msa0099030:intron | 30.0% | |
| ! | TTAATGTCAGATTGATAACC+TGG | + | chr1_3:5060579-5060598 | None:intergenic | 30.0% |
| ! | GTAGGTCTCATAATATTTTC+TGG | + | chr1_3:5060821-5060840 | None:intergenic | 30.0% |
| AATATGTTACTAAAAGCAGG+AGG | - | chr1_3:5060853-5060872 | Msa0099030:intron | 30.0% | |
| ATATGTTACTAAAAGCAGGA+GGG | - | chr1_3:5060854-5060873 | Msa0099030:intron | 30.0% | |
| TCCTAGATACTAAAAACTTG+AGG | - | chr1_3:5060896-5060915 | Msa0099030:intron | 30.0% | |
| CCTAGATACTAAAAACTTGA+GGG | - | chr1_3:5060897-5060916 | Msa0099030:intron | 30.0% | |
| CTAGATACTAAAAACTTGAG+GGG | - | chr1_3:5060898-5060917 | Msa0099030:intron | 30.0% | |
| !!! | ATCAAGTGATGTGTTTTTAG+AGG | - | chr1_3:5060945-5060964 | Msa0099030:intron | 30.0% |
| !!! | TCAAGTGATGTGTTTTTAGA+GGG | - | chr1_3:5060946-5060965 | Msa0099030:intron | 30.0% |
| !! | TTTGTTGTTACAAAGTTGAG+AGG | - | chr1_3:5061009-5061028 | Msa0099030:intron | 30.0% |
| ATAGAATGTGCAAAATTCTG+TGG | + | chr1_3:5061079-5061098 | None:intergenic | 30.0% | |
| GTTGTGAATGAAATGAGTTA+AGG | - | chr1_3:5061336-5061355 | Msa0099030:intron | 30.0% | |
| TGAATGAAATGAGTTAAGGA+TGG | - | chr1_3:5061340-5061359 | Msa0099030:intron | 30.0% | |
| GAATGAAATGAGTTAAGGAT+GGG | - | chr1_3:5061341-5061360 | Msa0099030:intron | 30.0% | |
| AATGAAATGAGTTAAGGATG+GGG | - | chr1_3:5061342-5061361 | Msa0099030:intron | 30.0% | |
| AAAATTGTACGGAAAGAGAA+AGG | - | chr1_3:5061419-5061438 | Msa0099030:intron | 30.0% | |
| TAATATGAGAGAAGTGAATG+TGG | - | chr1_3:5061456-5061475 | Msa0099030:intron | 30.0% | |
| CTTCTTTCTAATTCTCCAAA+TGG | - | chr1_3:5061518-5061537 | Msa0099030:intron | 30.0% | |
| TAGACATAAGCATCTTCATA+TGG | - | chr1_3:5062277-5062296 | Msa0099030:intron | 30.0% | |
| TGAGCAACATAAAGTTAGAA+GGG | + | chr1_3:5062454-5062473 | None:intergenic | 30.0% | |
| TTGAGCAACATAAAGTTAGA+AGG | + | chr1_3:5062455-5062474 | None:intergenic | 30.0% | |
| TCAATATGTGCAAGAAACTT+AGG | - | chr1_3:5062471-5062490 | Msa0099030:intron | 30.0% | |
| CAATATGTGCAAGAAACTTA+GGG | - | chr1_3:5062472-5062491 | Msa0099030:intron | 30.0% | |
| AATATGTGCAAGAAACTTAG+GGG | - | chr1_3:5062473-5062492 | Msa0099030:intron | 30.0% | |
| TTCAACATTTCGGTTCAATT+CGG | + | chr1_3:5062531-5062550 | None:intergenic | 30.0% | |
| ATTGAACCGAAATGTTGAAA+TGG | - | chr1_3:5062532-5062551 | Msa0099030:intron | 30.0% | |
| TAATCAAACCGAACCATTTA+AGG | - | chr1_3:5062562-5062581 | Msa0099030:intron | 30.0% | |
| ATGGTTCAGTTAATTGAGTT+TGG | - | chr1_3:5063014-5063033 | Msa0099030:intron | 30.0% | |
| TCAGTTAATTGAGTTTGGTT+CGG | - | chr1_3:5063019-5063038 | Msa0099030:intron | 30.0% | |
| TGTGCATTATAAGCAAACAT+TGG | + | chr1_3:5063216-5063235 | None:intergenic | 30.0% | |
| TTGCTTATAATGCACAATCT+TGG | - | chr1_3:5063220-5063239 | Msa0099030:intron | 30.0% | |
| ATAGTGAATATGCTAGAACA+TGG | + | chr1_3:5063429-5063448 | None:intergenic | 30.0% | |
| ! | ATTGTTCGCTGTCATAATTT+TGG | - | chr1_3:5063928-5063947 | Msa0099030:intron | 30.0% |
| ATGTAGTTTAAAGGTAAGAG+AGG | + | chr1_3:5063961-5063980 | None:intergenic | 30.0% | |
| GGTAACAACATGTAGTTTAA+AGG | + | chr1_3:5063970-5063989 | None:intergenic | 30.0% | |
| ! | CTTTCCCTTTCTAAGAAATT+AGG | - | chr1_3:5064367-5064386 | Msa0099030:intron | 30.0% |
| GAAACCCTAATTTCTTAGAA+AGG | + | chr1_3:5064375-5064394 | None:intergenic | 30.0% | |
| !! | TTCAACTTTTTCTTCCAAAG+TGG | - | chr1_3:5064392-5064411 | Msa0099030:intron | 30.0% |
| ATTAACAAACACAAGAAACC+AGG | + | chr1_3:5064548-5064567 | None:intergenic | 30.0% | |
| ! | TTAAAAACGGAATTGGTGAT+AGG | + | chr1_3:5064739-5064758 | None:intergenic | 30.0% |
| TGATTTATCTGTGGGAATTA+GGG | + | chr1_3:5065082-5065101 | None:intergenic | 30.0% | |
| ATGATTTATCTGTGGGAATT+AGG | + | chr1_3:5065083-5065102 | None:intergenic | 30.0% | |
| ATTCCCACAGATAAATCATT+TGG | - | chr1_3:5065084-5065103 | Msa0099030:intron | 30.0% | |
| CTAACCAAATGATTTATCTG+TGG | + | chr1_3:5065091-5065110 | None:intergenic | 30.0% | |
| CACAGATAAATCATTTGGTT+AGG | - | chr1_3:5065089-5065108 | Msa0099030:intron | 30.0% | |
| TTTGTGACTTACCTTTCAAA+TGG | + | chr1_3:5065153-5065172 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | + | chr1_3:5065836-5065855 | None:intergenic | 30.0% | |
| ! | TTGAAATGAGTCGGTTATTT+TGG | - | chr1_3:5065987-5066006 | Msa0099030:intron | 30.0% |
| !! | TGAAATGAGTCGGTTATTTT+GGG | - | chr1_3:5065988-5066007 | Msa0099030:intron | 30.0% |
| ACCGATAATTATTTGAGTCA+AGG | - | chr1_3:5066347-5066366 | Msa0099030:intron | 30.0% | |
| GCCTTCAAAAAAAAAATGAG+AGG | - | chr1_3:5066705-5066724 | Msa0099030:CDS | 30.0% | |
| !!! | CCCTCTCATTTTTTTTTTGA+AGG | + | chr1_3:5066709-5066728 | None:intergenic | 30.0% |
| TTACATAAATATACACCCTC+CGG | - | chr1_3:5066916-5066935 | Msa0099030:intron | 30.0% | |
| ! | CTTTTGCTTATATTAGTGAC+CGG | + | chr1_3:5067047-5067066 | None:intergenic | 30.0% |
| ! | CTTTTGCTTATATTAGTGAC+CGG | - | chr1_3:5067047-5067066 | Msa0099030:intron | 30.0% |
| ACACATGCCAAGTAAAAATA+TGG | - | chr1_3:5067259-5067278 | Msa0099030:intron | 30.0% | |
| ! | GAATTTAAAGGCGAAGATTT+TGG | - | chr1_3:5067313-5067332 | Msa0099030:intron | 30.0% |
| ! | TTTTGTGAATACATTAGGTG+GGG | + | chr1_3:5067675-5067694 | None:intergenic | 30.0% |
| ! | GATTTTGTGAATACATTAGG+TGG | + | chr1_3:5067677-5067696 | None:intergenic | 30.0% |
| !!! | TTGAGTTGTTTTTGTAGAGA+GGG | + | chr1_3:5067718-5067737 | None:intergenic | 30.0% |
| !!! | TTTGAGTTGTTTTTGTAGAG+AGG | + | chr1_3:5067719-5067738 | None:intergenic | 30.0% |
| TCTTGTAATGAAATGTAGGT+TGG | + | chr1_3:5067838-5067857 | None:intergenic | 30.0% | |
| ATGTTCTTTGTCAGTGTTTA+TGG | - | chr1_3:5068186-5068205 | Msa0099030:intron | 30.0% | |
| ATTATCAGGTTATGGTTAAC+CGG | - | chr1_3:5068307-5068326 | Msa0099030:intron | 30.0% | |
| AATGGTAAATGTTGAAGATC+AGG | + | chr1_3:5068450-5068469 | None:intergenic | 30.0% | |
| TTCGACGAAACAACAAAAAA+TGG | + | chr1_3:5068468-5068487 | None:intergenic | 30.0% | |
| !!! | TCGCTTACTTCTTGTTTTTA+TGG | - | chr1_3:5068498-5068517 | Msa0099030:intron | 30.0% |
| !! | AAAAGTGCCTAATAGAAAGA+TGG | - | chr1_3:5068650-5068669 | Msa0099030:intron | 30.0% |
| GTAAACAAGAAACCAACAAA+GGG | + | chr1_3:5068710-5068729 | None:intergenic | 30.0% | |
| ! | TGGTTTCTTGTTTACCTAAT+TGG | - | chr1_3:5068715-5068734 | Msa0099030:intron | 30.0% |
| ! | GGTTTCTTGTTTACCTAATT+GGG | - | chr1_3:5068716-5068735 | Msa0099030:intron | 30.0% |
| ! | GTTTCTTGTTTACCTAATTG+GGG | - | chr1_3:5068717-5068736 | Msa0099030:intron | 30.0% |
| AAGACACGCAATTATAAGGA+AGG | + | chr1_3:5057916-5057935 | None:intergenic | 35.0% | |
| CAGAAAGACACGCAATTATA+AGG | + | chr1_3:5057920-5057939 | None:intergenic | 35.0% | |
| CTTATAATTGCGTGTCTTTC+TGG | - | chr1_3:5057918-5057937 | Msa0099030:CDS | 35.0% | |
| !! | TTTGGTAATCATTGGCTTTG+AGG | - | chr1_3:5058100-5058119 | Msa0099030:CDS | 35.0% |
| GTGATTTCCTTTCAAGAGAT+AGG | - | chr1_3:5058153-5058172 | Msa0099030:CDS | 35.0% | |
| TCATCTTCATTGTTGAAGTG+TGG | - | chr1_3:5058233-5058252 | Msa0099030:CDS | 35.0% | |
| CATCTTCATTGTTGAAGTGT+GGG | - | chr1_3:5058234-5058253 | Msa0099030:CDS | 35.0% | |
| TGCTGAAATATCATGCTTCT+AGG | - | chr1_3:5058495-5058514 | Msa0099030:CDS | 35.0% | |
| TAAACTGATGAAGCCTCATT+CGG | - | chr1_3:5058869-5058888 | Msa0099030:CDS | 35.0% | |
| CTTGGAGGTAAGGTAATATA+AGG | - | chr1_3:5058939-5058958 | Msa0099030:CDS | 35.0% | |
| GACTGAACAGACAACTTATA+AGG | - | chr1_3:5059231-5059250 | Msa0099030:intron | 35.0% | |
| AGACTTTATTAAAGGGAAGG+TGG | + | chr1_3:5059329-5059348 | None:intergenic | 35.0% | |
| GAGAGACTTTATTAAAGGGA+AGG | + | chr1_3:5059332-5059351 | None:intergenic | 35.0% | |
| GACTGTATGTCTTATAGACT+CGG | - | chr1_3:5059403-5059422 | Msa0099030:intron | 35.0% | |
| ! | GACTCGGTATAATTATCACA+AGG | - | chr1_3:5059419-5059438 | Msa0099030:intron | 35.0% |
| AAAGCATGTGATGGTATTGT+TGG | - | chr1_3:5059532-5059551 | Msa0099030:intron | 35.0% | |
| TATTGACATGTCTCGAGTAT+TGG | - | chr1_3:5059564-5059583 | Msa0099030:intron | 35.0% | |
| ATTGACATGTCTCGAGTATT+GGG | - | chr1_3:5059565-5059584 | Msa0099030:intron | 35.0% | |
| ATCTTCCCTACCATAAGAAA+AGG | + | chr1_3:5059941-5059960 | None:intergenic | 35.0% | |
| GTAGGGAAGATTACGTATAA+TGG | - | chr1_3:5059950-5059969 | Msa0099030:intron | 35.0% | |
| AATTACAGGGATTGATAAGC+AGG | + | chr1_3:5060003-5060022 | None:intergenic | 35.0% | |
| TTATCAATCCCTGTAATTGC+TGG | - | chr1_3:5060005-5060024 | Msa0099030:intron | 35.0% | |
| !! | AAACTCTAAAGCATCTTCTG+CGG | + | chr1_3:5060181-5060200 | None:intergenic | 35.0% |
| ATAAACTGCGCATCATAGAA+GGG | - | chr1_3:5060217-5060236 | Msa0099030:intron | 35.0% | |
| TGAATTGACAAGCTTAGTTG+TGG | - | chr1_3:5060269-5060288 | Msa0099030:intron | 35.0% | |
| GAGATAAACCTTTCCATTCA+CGG | - | chr1_3:5060355-5060374 | Msa0099030:intron | 35.0% | |
| ATGAGAAGCTAGGACAATAT+TGG | + | chr1_3:5060505-5060524 | None:intergenic | 35.0% | |
| AGGTTCAATAATGAGAAGCT+AGG | + | chr1_3:5060515-5060534 | None:intergenic | 35.0% | |
| !!! | CCAAGATCAATTGTTTTGGT+AGG | + | chr1_3:5060734-5060753 | None:intergenic | 35.0% |
| CCTACCAAAACAATTGATCT+TGG | - | chr1_3:5060731-5060750 | Msa0099030:intron | 35.0% | |
| ! | GCTTCCAAGATCAATTGTTT+TGG | + | chr1_3:5060738-5060757 | None:intergenic | 35.0% |
| AACAATTGATCTTGGAAGCA+AGG | - | chr1_3:5060739-5060758 | Msa0099030:intron | 35.0% | |
| TATGTTACTAAAAGCAGGAG+GGG | - | chr1_3:5060855-5060874 | Msa0099030:intron | 35.0% | |
| !!! | CCCTCAAGTTTTTAGTATCT+AGG | + | chr1_3:5060900-5060919 | None:intergenic | 35.0% |
| !!! | CAAGTGATGTGTTTTTAGAG+GGG | - | chr1_3:5060947-5060966 | Msa0099030:intron | 35.0% |
| ACAGTCAGCTTTCAATCTAA+GGG | + | chr1_3:5060985-5061004 | None:intergenic | 35.0% | |
| AACAGTCAGCTTTCAATCTA+AGG | + | chr1_3:5060986-5061005 | None:intergenic | 35.0% | |
| !!! | TCACTTTTTGTGGCAGTATT+AGG | - | chr1_3:5061292-5061311 | Msa0099030:intron | 35.0% |
| !! | CACTTTTTGTGGCAGTATTA+GGG | - | chr1_3:5061293-5061312 | Msa0099030:intron | 35.0% |
| GGCAAAATGTGAAGCTAAAA+AGG | - | chr1_3:5061363-5061382 | Msa0099030:intron | 35.0% | |
| AGACAAAGAGAGCAACATAT+AGG | + | chr1_3:5061613-5061632 | None:intergenic | 35.0% | |
| CAAGATCCAAACAAAAAGTG+AGG | - | chr1_3:5062238-5062257 | Msa0099030:intron | 35.0% | |
| ! | TACACTTTTGTCGTGATACT+AGG | - | chr1_3:5062313-5062332 | Msa0099030:intron | 35.0% |
| ! | AACGGATTCAACTTTCTGTT+GGG | - | chr1_3:5062340-5062359 | Msa0099030:intron | 35.0% |
| GAGCAACATAAAGTTAGAAG+GGG | + | chr1_3:5062453-5062472 | None:intergenic | 35.0% | |
| !! | TCAATTCGGTTCGGTTAATA+TGG | + | chr1_3:5062517-5062536 | None:intergenic | 35.0% |
| ! | AAACCGAACCATTTAAGGTT+TGG | - | chr1_3:5062567-5062586 | Msa0099030:intron | 35.0% |
| GTTCCAAACCTTAAATGGTT+CGG | + | chr1_3:5062573-5062592 | None:intergenic | 35.0% | |
| ! | GGTTAGTTCCAAACCTTAAA+TGG | + | chr1_3:5062578-5062597 | None:intergenic | 35.0% |
| ! | ACCATACATTTGGTTCAGTT+CGG | + | chr1_3:5062599-5062618 | None:intergenic | 35.0% |
| ACTGAACCAAATGTATGGTT+CGG | - | chr1_3:5062600-5062619 | Msa0099030:intron | 35.0% | |
| TCGGTTAATAGCCAAACAAA+CGG | + | chr1_3:5062630-5062649 | None:intergenic | 35.0% | |
| !! | TTAATTGGTTCGCTTCGATT+CGG | + | chr1_3:5062649-5062668 | None:intergenic | 35.0% |
| !!! | TTATGCTCATGCCATTTTTG+TGG | + | chr1_3:5062948-5062967 | None:intergenic | 35.0% |
| !! | TAATTGAGTTTGGTTCGGTT+CGG | - | chr1_3:5063024-5063043 | Msa0099030:intron | 35.0% |
| AGTTCATTAACTGAACCGAA+CGG | + | chr1_3:5063054-5063073 | None:intergenic | 35.0% | |
| CGGTTCAATAACCAATGTAA+TGG | - | chr1_3:5063092-5063111 | Msa0099030:intron | 35.0% | |
| CTTATAATGCACAATCTTGG+TGG | - | chr1_3:5063223-5063242 | Msa0099030:intron | 35.0% | |
| ! | GTTGTCTCTGAAGAAGATAA+GGG | + | chr1_3:5063786-5063805 | None:intergenic | 35.0% |
| ! | AGTTGTCTCTGAAGAAGATA+AGG | + | chr1_3:5063787-5063806 | None:intergenic | 35.0% |
| !!! | CGTCATCCATTTTGAAGTAT+CGG | + | chr1_3:5064059-5064078 | None:intergenic | 35.0% |
| GAAAGATGCAATTGTTTGTG+TGG | + | chr1_3:5064352-5064371 | None:intergenic | 35.0% | |
| TCTCTAAATGGCCATTTGAA+AGG | - | chr1_3:5065139-5065158 | Msa0099030:intron | 35.0% | |
| AGGTAAGTCACAAAAATGTG+AGG | - | chr1_3:5065159-5065178 | Msa0099030:intron | 35.0% | |
| AAACAATTACCTCGAGGATT+GGG | + | chr1_3:5065667-5065686 | None:intergenic | 35.0% | |
| TAAACAATTACCTCGAGGAT+TGG | + | chr1_3:5065668-5065687 | None:intergenic | 35.0% | |
| AGTAGTAAACAATTACCTCG+AGG | + | chr1_3:5065673-5065692 | None:intergenic | 35.0% | |
| !! | CTCTTCAACTTTGAGGTATT+TGG | + | chr1_3:5067440-5067459 | None:intergenic | 35.0% |
| AGTTTGTCTCTTCAACTTTG+AGG | + | chr1_3:5067447-5067466 | None:intergenic | 35.0% | |
| TAACTCGATTGATGAGCTAA+AGG | + | chr1_3:5067500-5067519 | None:intergenic | 35.0% | |
| AGTTTGTGTTACCATTGTGT+AGG | + | chr1_3:5067800-5067819 | None:intergenic | 35.0% | |
| !!! | ATGTAGGTTGGTTTTAGCAA+CGG | + | chr1_3:5067826-5067845 | None:intergenic | 35.0% |
| AGATCTACGACGTTTCAAAA+TGG | - | chr1_3:5067908-5067927 | Msa0099030:intron | 35.0% | |
| GATCTACGACGTTTCAAAAT+GGG | - | chr1_3:5067909-5067928 | Msa0099030:intron | 35.0% | |
| ! | TTTGGTTAGTTCGGAGAAAA+GGG | + | chr1_3:5068106-5068125 | None:intergenic | 35.0% |
| TTGTTCGAAGAAAAAGGACA+CGG | - | chr1_3:5068132-5068151 | Msa0099030:intron | 35.0% | |
| TTCTTTGGATTCAAAGTGGT+TGG | - | chr1_3:5068265-5068284 | Msa0099030:intron | 35.0% | |
| TCATGATTCTGGTCATTATC+AGG | - | chr1_3:5068293-5068312 | Msa0099030:intron | 35.0% | |
| TTCTGGTCATTATCAGGTTA+TGG | - | chr1_3:5068299-5068318 | Msa0099030:intron | 35.0% | |
| ! | GCATAAACTGATTCCATTTC+CGG | + | chr1_3:5068329-5068348 | None:intergenic | 35.0% |
| CAGTTTATGCAGATTCTTTC+TGG | - | chr1_3:5068339-5068358 | Msa0099030:intron | 35.0% | |
| !! | TTGCTGGTATAAGCATTGAA+TGG | - | chr1_3:5068370-5068389 | Msa0099030:intron | 35.0% |
| !! | TAAGCATTGAATGGTGGAAA+TGG | - | chr1_3:5068379-5068398 | Msa0099030:intron | 35.0% |
| CAAGACTATTACAAGCAAGA+TGG | + | chr1_3:5068419-5068438 | None:intergenic | 35.0% | |
| ! | TGATTCTTTTGCTAGGTTCT+TGG | - | chr1_3:5068536-5068555 | Msa0099030:intron | 35.0% |
| !!! | AAAGATGGAACTTTTAGGGT+TGG | - | chr1_3:5068665-5068684 | Msa0099030:intron | 35.0% |
| GGTAAACAAGAAACCAACAA+AGG | + | chr1_3:5068711-5068730 | None:intergenic | 35.0% | |
| !!! | TTGCTAGTTTTTGTGTGACT+GGG | - | chr1_3:5068760-5068779 | Msa0099030:intron | 35.0% |
| ! | TTTTCGGCTAGTGTTTATGT+TGG | - | chr1_3:5068813-5068832 | Msa0099030:intron | 35.0% |
| ! | TTGATGTGAAGTGTTCTTCT+TGG | - | chr1_3:5068883-5068902 | Msa0099030:intron | 35.0% |
| AAGACACACAATTGTAAGGA+AGG | + | chr1_3:5069028-5069047 | None:intergenic | 35.0% | |
| CAGAAAGACACACAATTGTA+AGG | + | chr1_3:5069032-5069051 | None:intergenic | 35.0% | |
| CTTACAATTGTGTGTCTTTC+TGG | - | chr1_3:5069030-5069049 | Msa0099030:CDS | 35.0% | |
| TGCTTACTATTCAGACTTTG+AGG | - | chr1_3:5069063-5069082 | Msa0099030:CDS | 35.0% | |
| ! | TATTCAGACTTTGAGGAATG+CGG | - | chr1_3:5069070-5069089 | Msa0099030:CDS | 35.0% |
| CAAACTAAATTTCTCGGAAC+CGG | + | chr1_3:5069122-5069141 | None:intergenic | 35.0% | |
| ! | GGTTCCGAGAAATTTAGTTT+GGG | - | chr1_3:5069121-5069140 | Msa0099030:CDS | 35.0% |
| GCTTCCCAAACTAAATTTCT+CGG | + | chr1_3:5069128-5069147 | None:intergenic | 35.0% | |
| TTGCACAGATCCTTAACCAA+AGG | + | chr1_3:5057884-5057903 | None:intergenic | 40.0% | |
| TAATTGCGTGTCTTTCTGGA+AGG | - | chr1_3:5057922-5057941 | Msa0099030:CDS | 40.0% | |
| CGTCTGAATGGTAAGTAGAT+TGG | + | chr1_3:5057948-5057967 | None:intergenic | 40.0% | |
| TACTTACCATTCAGACGTTG+AGG | - | chr1_3:5057951-5057970 | Msa0099030:CDS | 40.0% | |
| TGGGAAGCTGTTAATACTCA+TGG | - | chr1_3:5058028-5058047 | Msa0099030:CDS | 40.0% | |
| !! | TACTGATACTGGTTCATCTG+AGG | - | chr1_3:5058188-5058207 | Msa0099030:CDS | 40.0% |
| CAAATATCCATTGCCGCATA+AGG | + | chr1_3:5058296-5058315 | None:intergenic | 40.0% | |
| AACAATCAGCAGCATAAGGA+AGG | + | chr1_3:5058442-5058461 | None:intergenic | 40.0% | |
| AAGCAACAATCAGCAGCATA+AGG | + | chr1_3:5058446-5058465 | None:intergenic | 40.0% | |
| TGTGATAAGATTTGGCATCC+AGG | + | chr1_3:5058712-5058731 | None:intergenic | 40.0% | |
| GAAGCAGACTTGTATCGTTA+AGG | + | chr1_3:5058761-5058780 | None:intergenic | 40.0% | |
| ! | TTGTCTTCTAGGGAAAGTGA+AGG | - | chr1_3:5059040-5059059 | Msa0099030:CDS | 40.0% |
| AGTGTTTGACTATAGCTCAC+AGG | + | chr1_3:5059109-5059128 | None:intergenic | 40.0% | |
| !! | GAGTGCATGGGTTAGTATAT+AGG | - | chr1_3:5059377-5059396 | Msa0099030:intron | 40.0% |
| ! | TCATTGGAGAAAGCATGTGA+TGG | - | chr1_3:5059523-5059542 | Msa0099030:intron | 40.0% |
| GTTTGTCAGATATATCTGGC+CGG | - | chr1_3:5059624-5059643 | Msa0099030:intron | 40.0% | |
| ! | CTCCTTTTGCTAGGTTAAAC+CGG | + | chr1_3:5059646-5059665 | None:intergenic | 40.0% |
| GTTTAACCTAGCAAAAGGAG+TGG | - | chr1_3:5059646-5059665 | Msa0099030:intron | 40.0% | |
| CAGCAAATGAACAAAGAAGC+AGG | + | chr1_3:5059824-5059843 | None:intergenic | 40.0% | |
| AGATCATCAGAACCATGACA+TGG | + | chr1_3:5059847-5059866 | None:intergenic | 40.0% | |
| AAACCTTGCCAGCAATTACA+GGG | + | chr1_3:5060016-5060035 | None:intergenic | 40.0% | |
| TGTTGACAGTTCAGAATCCA+TGG | - | chr1_3:5060143-5060162 | Msa0099030:intron | 40.0% | |
| !! | AACTCTAAAGCATCTTCTGC+GGG | + | chr1_3:5060180-5060199 | None:intergenic | 40.0% |
| CATAAACTGCGCATCATAGA+AGG | - | chr1_3:5060216-5060235 | Msa0099030:intron | 40.0% | |
| TAAACTGCGCATCATAGAAG+GGG | - | chr1_3:5060218-5060237 | Msa0099030:intron | 40.0% | |
| ACATCCAAGTAGACACGATT+TGG | - | chr1_3:5060327-5060346 | Msa0099030:intron | 40.0% | |
| TCTTCCAAATCGTGTCTACT+TGG | + | chr1_3:5060334-5060353 | None:intergenic | 40.0% | |
| ! | AAGTAGACACGATTTGGAAG+AGG | - | chr1_3:5060333-5060352 | Msa0099030:intron | 40.0% |
| ! | AATTATTGGCTGCGAGGAAT+AGG | + | chr1_3:5060456-5060475 | None:intergenic | 40.0% |
| ! | ATGTACAATTATTGGCTGCG+AGG | + | chr1_3:5060462-5060481 | None:intergenic | 40.0% |
| ATAACCTGGCAATAATGACG+CGG | + | chr1_3:5060565-5060584 | None:intergenic | 40.0% | |
| TGTTCTATCTACCAGATGAG+TGG | + | chr1_3:5060653-5060672 | None:intergenic | 40.0% | |
| ATGTTACTAAAAGCAGGAGG+GGG | - | chr1_3:5060856-5060875 | Msa0099030:intron | 40.0% | |
| AGTCAGCTTTCAATCTAAGG+GGG | + | chr1_3:5060983-5061002 | None:intergenic | 40.0% | |
| CAGTCAGCTTTCAATCTAAG+GGG | + | chr1_3:5060984-5061003 | None:intergenic | 40.0% | |
| CTTAACAGCAGTACTACAGT+AGG | + | chr1_3:5061043-5061062 | None:intergenic | 40.0% | |
| CTACTGTAGTACTGCTGTTA+AGG | - | chr1_3:5061041-5061060 | Msa0099030:intron | 40.0% | |
| GTGCAAAATTCTGTGGCTAT+AGG | + | chr1_3:5061072-5061091 | None:intergenic | 40.0% | |
| TCACGAGTCTCTTTATCTTG+AGG | - | chr1_3:5061136-5061155 | Msa0099030:intron | 40.0% | |
| CGTGCTATCCTTATGTGTTA+TGG | + | chr1_3:5061271-5061290 | None:intergenic | 40.0% | |
| TACGGAAAGAGAAAGGAAGA+TGG | - | chr1_3:5061426-5061445 | Msa0099030:intron | 40.0% | |
| TGCGTCTAGCAGAATGAATT+AGG | + | chr1_3:5062014-5062033 | None:intergenic | 40.0% | |
| ! | CATTCTGCTAGACGCAATTT+TGG | - | chr1_3:5062018-5062037 | Msa0099030:intron | 40.0% |
| !!! | CTTCAGCCTCACTTTTTGTT+TGG | + | chr1_3:5062247-5062266 | None:intergenic | 40.0% |
| ! | CAACGGATTCAACTTTCTGT+TGG | - | chr1_3:5062339-5062358 | Msa0099030:intron | 40.0% |
| CATTTCGGTTCAATTCGGTT+CGG | + | chr1_3:5062526-5062545 | None:intergenic | 40.0% | |
| ACCGAACTGAACCAAATGTA+TGG | - | chr1_3:5062595-5062614 | Msa0099030:intron | 40.0% | |
| GGTTAACCGAACCATACATT+TGG | + | chr1_3:5062609-5062628 | None:intergenic | 40.0% | |
| AAATGGCATGAGCATAACAG+AGG | - | chr1_3:5062951-5062970 | Msa0099030:intron | 40.0% | |
| !! | TAGTTTGGTTTGGTTCGGTT+CGG | - | chr1_3:5063127-5063146 | Msa0099030:intron | 40.0% |
| ATCCAAAAACTGAACCGAAC+CGG | + | chr1_3:5063157-5063176 | None:intergenic | 40.0% | |
| ! | GGAAACGTTTCTTTAGGAGT+GGG | + | chr1_3:5063187-5063206 | None:intergenic | 40.0% |
| ! | TGGAAACGTTTCTTTAGGAG+TGG | + | chr1_3:5063188-5063207 | None:intergenic | 40.0% |
| ! | CACAATCTTGGTGGCATTTA+GGG | - | chr1_3:5063232-5063251 | Msa0099030:intron | 40.0% |
| AAGAAGATAAGGGTGGTTGA+AGG | + | chr1_3:5063776-5063795 | None:intergenic | 40.0% | |
| GTCAAATGTGCATCTGTCAA+AGG | + | chr1_3:5063895-5063914 | None:intergenic | 40.0% | |
| GAAGCTCCGATACTTCAAAA+TGG | - | chr1_3:5064050-5064069 | Msa0099030:intron | 40.0% | |
| ACACAAGTATCCGTGTGTAT+CGG | + | chr1_3:5064207-5064226 | None:intergenic | 40.0% | |
| ATGCAATTGTTTGTGTGGTG+TGG | + | chr1_3:5064347-5064366 | None:intergenic | 40.0% | |
| AATCAAGATACGATACGGCT+GGG | + | chr1_3:5064643-5064662 | None:intergenic | 40.0% | |
| AAATCAAGATACGATACGGC+TGG | + | chr1_3:5064644-5064663 | None:intergenic | 40.0% | |
| !! | ATTTTTCCGTATCGGCGTAT+CGG | - | chr1_3:5064669-5064688 | Msa0099030:intron | 40.0% |
| !! | TTTTGGAGATGTGGCTCAAT+TGG | + | chr1_3:5065401-5065420 | None:intergenic | 40.0% |
| !! | TACTTTGAAAGCGACGCTTT+TGG | + | chr1_3:5065418-5065437 | None:intergenic | 40.0% |
| AAGAATTCCACATGTGCTGT+GGG | + | chr1_3:5065442-5065461 | None:intergenic | 40.0% | |
| ATTAAACAACCCAATCCTCG+AGG | - | chr1_3:5065655-5065674 | Msa0099030:intron | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | + | chr1_3:5065833-5065852 | None:intergenic | 40.0% | |
| AAATATTACTCCCTCCGTCT+CGG | + | chr1_3:5066045-5066064 | None:intergenic | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr1_3:5067051-5067070 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr1_3:5067050-5067069 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr1_3:5067050-5067069 | Msa0099030:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr1_3:5067051-5067070 | Msa0099030:intron | 40.0% | |
| !!! | GAAGATTTTGGGTTTGATCC+TGG | - | chr1_3:5067325-5067344 | Msa0099030:intron | 40.0% |
| ! | AGGTATTTGGTTCGAGATCT+GGG | + | chr1_3:5067427-5067446 | None:intergenic | 40.0% |
| TAGGGTCAATCAGGTAAACT+AGG | + | chr1_3:5067651-5067670 | None:intergenic | 40.0% | |
| GAATACATTAGGTGGGGATA+GGG | + | chr1_3:5067669-5067688 | None:intergenic | 40.0% | |
| TGAATACATTAGGTGGGGAT+AGG | + | chr1_3:5067670-5067689 | None:intergenic | 40.0% | |
| TTGTAGAGAGGGAAGTAAGT+AGG | + | chr1_3:5067707-5067726 | None:intergenic | 40.0% | |
| CTTCAAAAACACAACACTCG+CGG | - | chr1_3:5067859-5067878 | Msa0099030:intron | 40.0% | |
| !!! | GTTTTGGAGATGTCTGTAAG+CGG | + | chr1_3:5068022-5068041 | None:intergenic | 40.0% |
| ! | GTTTGGTTAGTTCGGAGAAA+AGG | + | chr1_3:5068107-5068126 | None:intergenic | 40.0% |
| TTTCTCCGAACTAACCAAAC+TGG | - | chr1_3:5068107-5068126 | Msa0099030:intron | 40.0% | |
| TTCTCCGAACTAACCAAACT+GGG | - | chr1_3:5068108-5068127 | Msa0099030:intron | 40.0% | |
| ! | CAAACCCAGTTTGGTTAGTT+CGG | + | chr1_3:5068115-5068134 | None:intergenic | 40.0% |
| TTCTTCGAACAAACCCAGTT+TGG | + | chr1_3:5068124-5068143 | None:intergenic | 40.0% | |
| ! | CTGGGTTTGTTCGAAGAAAA+AGG | - | chr1_3:5068126-5068145 | Msa0099030:intron | 40.0% |
| ! | GTGCTTTCTGGAGGATTAAT+GGG | - | chr1_3:5068240-5068259 | Msa0099030:intron | 40.0% |
| ! | GAGGATTAATGGGTCTTCTT+TGG | - | chr1_3:5068250-5068269 | Msa0099030:intron | 40.0% |
| GGTCTTCTTTGGATTCAAAG+TGG | - | chr1_3:5068261-5068280 | Msa0099030:intron | 40.0% | |
| TGGATTCAAAGTGGTTGGAT+TGG | - | chr1_3:5068270-5068289 | Msa0099030:intron | 40.0% | |
| AGGTTATGGTTAACCGGAAA+TGG | - | chr1_3:5068313-5068332 | Msa0099030:intron | 40.0% | |
| ! | CTTTCTGGTAATGTTCTTGC+TGG | - | chr1_3:5068354-5068373 | Msa0099030:intron | 40.0% |
| !! | CTGGTATAAGCATTGAATGG+TGG | - | chr1_3:5068373-5068392 | Msa0099030:intron | 40.0% |
| CAGGATAATAACTCCAATGC+TGG | + | chr1_3:5068569-5068588 | None:intergenic | 40.0% | |
| ! | ATCCTGTGATGTGTTTTGCT+AGG | - | chr1_3:5068583-5068602 | Msa0099030:intron | 40.0% |
| !!! | TTTTAGGGTTGGCTCTGTTT+TGG | - | chr1_3:5068676-5068695 | Msa0099030:intron | 40.0% |
| ! | TTGGATTTGGTACCCTTTGT+TGG | - | chr1_3:5068695-5068714 | Msa0099030:intron | 40.0% |
| TTTACCTAATTGGGGTGAGA+GGG | - | chr1_3:5068725-5068744 | Msa0099030:intron | 40.0% | |
| !!! | CTTGCTAGTTTTTGTGTGAC+TGG | - | chr1_3:5068759-5068778 | Msa0099030:intron | 40.0% |
| ! | TGTGAAGTGTTCTTCTTGGA+TGG | - | chr1_3:5068887-5068906 | Msa0099030:intron | 40.0% |
| AGTGTTCTTCTTGGATGGAT+TGG | - | chr1_3:5068892-5068911 | Msa0099030:intron | 40.0% | |
| !! | TCTTGGATGGATTGGTTTCA+TGG | - | chr1_3:5068900-5068919 | Msa0099030:intron | 40.0% |
| ATCTTCCTCAAATTACACCG+TGG | + | chr1_3:5068969-5068988 | None:intergenic | 40.0% | |
| TTTGAGGAAGATTTCGCCTT+TGG | - | chr1_3:5068977-5068996 | Msa0099030:CDS | 40.0% | |
| GAAGATTTCGCCTTTGGTTA+AGG | - | chr1_3:5068983-5069002 | Msa0099030:CDS | 40.0% | |
| TTGCACAGATCCTTAACCAA+AGG | + | chr1_3:5057884-5057903 | None:intergenic | 40.0% | |
| CAATTGTGTGTCTTTCTGGA+AGG | - | chr1_3:5069034-5069053 | Msa0099030:CDS | 40.0% | |
| CGGTTCCGAGAAATTTAGTT+TGG | - | chr1_3:5069120-5069139 | Msa0099030:CDS | 40.0% | |
| TGGGAAGCTGTTAATACTCA+TGG | - | chr1_3:5058028-5058047 | Msa0099030:CDS | 40.0% | |
| TTGAACACCATCTGTTTCCG+CGG | - | chr1_3:5057828-5057847 | Msa0099030:CDS | 45.0% | |
| ACTTTCCTTAGACTACACCG+AGG | + | chr1_3:5057857-5057876 | None:intergenic | 45.0% | |
| TCTAAGGAAAGTCTCGCCTT+TGG | - | chr1_3:5057865-5057884 | Msa0099030:CDS | 45.0% | |
| GAAAGTCTCGCCTTTGGTTA+AGG | - | chr1_3:5057871-5057890 | Msa0099030:CDS | 45.0% | |
| AGCATTCCTCAACGTCTGAA+TGG | + | chr1_3:5057960-5057979 | None:intergenic | 45.0% | |
| GCCTGTTCGATTTCCTTATG+CGG | - | chr1_3:5058280-5058299 | Msa0099030:CDS | 45.0% | |
| TCGATTTCCTTATGCGGCAA+TGG | - | chr1_3:5058286-5058305 | Msa0099030:CDS | 45.0% | |
| CCAAACGACGATGAATTCCA+AGG | + | chr1_3:5058343-5058362 | None:intergenic | 45.0% | |
| CCTTGGAATTCATCGTCGTT+TGG | - | chr1_3:5058340-5058359 | Msa0099030:CDS | 45.0% | |
| ATAAGGAAGGAGCCAGGAAA+TGG | + | chr1_3:5058429-5058448 | None:intergenic | 45.0% | |
| CTTCTACCGTATAAGTCGTC+TGG | - | chr1_3:5058603-5058622 | Msa0099030:CDS | 45.0% | |
| CGTTCACCAGACGACTTATA+CGG | + | chr1_3:5058612-5058631 | None:intergenic | 45.0% | |
| !! | GTTTTATTCCCGACAGAACC+TGG | - | chr1_3:5058691-5058710 | Msa0099030:CDS | 45.0% |
| ATTTGGCATCCAGGTTCTGT+CGG | + | chr1_3:5058703-5058722 | None:intergenic | 45.0% | |
| GCAGACTTGTATCGTTAAGG+AGG | + | chr1_3:5058758-5058777 | None:intergenic | 45.0% | |
| ! | TGGTCACTTTGTTCCGAATG+AGG | + | chr1_3:5058885-5058904 | None:intergenic | 45.0% |
| AGTGAAGGTTCGTTTCAGTG+TGG | - | chr1_3:5059055-5059074 | Msa0099030:CDS | 45.0% | |
| ACAGGTCTTCAACTTCTCTG+TGG | + | chr1_3:5059091-5059110 | None:intergenic | 45.0% | |
| ! | GTTCATTTGCTGCCATGTCA+TGG | - | chr1_3:5059832-5059851 | Msa0099030:intron | 45.0% |
| GGATTGATAAGCAGGCAAGA+TGG | + | chr1_3:5059995-5060014 | None:intergenic | 45.0% | |
| AATCCCTGTAATTGCTGGCA+AGG | - | chr1_3:5060010-5060029 | Msa0099030:intron | 45.0% | |
| CAAACCTTGCCAGCAATTAC+AGG | + | chr1_3:5060017-5060036 | None:intergenic | 45.0% | |
| TGCGGGTATAGTTTCATCCA+TGG | + | chr1_3:5060163-5060182 | None:intergenic | 45.0% | |
| GACTAGAACCGTGAATGGAA+AGG | + | chr1_3:5060366-5060385 | None:intergenic | 45.0% | |
| TCTAGTCCTCGCAGAATATG+TGG | - | chr1_3:5060379-5060398 | Msa0099030:intron | 45.0% | |
| TGTCAGACGTGCAATTGTTG+AGG | + | chr1_3:5060535-5060554 | None:intergenic | 45.0% | |
| CCTCACTTGAGTTACACTTC+TGG | + | chr1_3:5060770-5060789 | None:intergenic | 45.0% | |
| ! | CCAGAAGTGTAACTCAAGTG+AGG | - | chr1_3:5060767-5060786 | Msa0099030:intron | 45.0% |
| TGTTACTAAAAGCAGGAGGG+GGG | - | chr1_3:5060857-5060876 | Msa0099030:intron | 45.0% | |
| !!! | GATAGCACGCTCACTTTTTG+TGG | - | chr1_3:5061282-5061301 | Msa0099030:intron | 45.0% |
| !! | CTGCTAGACGCAATTTTGGT+TGG | - | chr1_3:5062022-5062041 | Msa0099030:intron | 45.0% |
| GTCGTGATACTAGGTTGCAA+CGG | - | chr1_3:5062322-5062341 | Msa0099030:intron | 45.0% | |
| AGCAAGTGGTGCACATATTG+AGG | + | chr1_3:5062428-5062447 | None:intergenic | 45.0% | |
| ATGTGCAAGAAACTTAGGGG+TGG | - | chr1_3:5062476-5062495 | Msa0099030:intron | 45.0% | |
| TGTGCAAGAAACTTAGGGGT+GGG | - | chr1_3:5062477-5062496 | Msa0099030:intron | 45.0% | |
| ! | GGTTCGGTTAACCGTTTGTT+TGG | - | chr1_3:5062616-5062635 | Msa0099030:intron | 45.0% |
| !! | TTTGGTTCGGTTCGGTTAAC+CGG | - | chr1_3:5063032-5063051 | Msa0099030:intron | 45.0% |
| !!! | AACCGGTTCGGTTCAGTTTT+TGG | - | chr1_3:5063152-5063171 | Msa0099030:intron | 45.0% |
| ! | GCACAATCTTGGTGGCATTT+AGG | - | chr1_3:5063231-5063250 | Msa0099030:intron | 45.0% |
| ! | AATCTTGGTGGCATTTAGGG+TGG | - | chr1_3:5063235-5063254 | Msa0099030:intron | 45.0% |
| ! | ATCTTGGTGGCATTTAGGGT+GGG | - | chr1_3:5063236-5063255 | Msa0099030:intron | 45.0% |
| ! | GTCTCTGAAGAAGATAAGGG+TGG | + | chr1_3:5063783-5063802 | None:intergenic | 45.0% |
| ATCGGAGCTTCACATGTGAT+AGG | + | chr1_3:5064041-5064060 | None:intergenic | 45.0% | |
| ATATCGGTGCAAGATACGCA+GGG | + | chr1_3:5064091-5064110 | None:intergenic | 45.0% | |
| !! | GATACGTATCGGGAAGTATC+GGG | + | chr1_3:5064117-5064136 | None:intergenic | 45.0% |
| ! | GGATACGTATCGGGAAGTAT+CGG | + | chr1_3:5064118-5064137 | None:intergenic | 45.0% |
| GATACTTCCCGATACGTATC+CGG | - | chr1_3:5064117-5064136 | Msa0099030:intron | 45.0% | |
| ATACTCTCCGGATACGTATC+GGG | + | chr1_3:5064127-5064146 | None:intergenic | 45.0% | |
| GATACTCTCCGGATACGTAT+CGG | + | chr1_3:5064128-5064147 | None:intergenic | 45.0% | |
| CACAAGTATCCGTGTGTATC+GGG | + | chr1_3:5064206-5064225 | None:intergenic | 45.0% | |
| TTGTTTGTGTGGTGTGGTGT+GGG | + | chr1_3:5064341-5064360 | None:intergenic | 45.0% | |
| ATTGTTTGTGTGGTGTGGTG+TGG | + | chr1_3:5064342-5064361 | None:intergenic | 45.0% | |
| CACCGTTGAAGTCTTGGTAT+CGG | - | chr1_3:5064432-5064451 | Msa0099030:intron | 45.0% | |
| GTCCGATACCAAGACTTCAA+CGG | + | chr1_3:5064437-5064456 | None:intergenic | 45.0% | |
| ATGTTAATGTGCTACGAGCC+TGG | - | chr1_3:5064527-5064546 | Msa0099030:intron | 45.0% | |
| TCCGTATCGTATCTCGTATC+CGG | - | chr1_3:5064704-5064723 | Msa0099030:intron | 45.0% | |
| ! | AATTAGGGTGTTCCTCCTTC+GGG | + | chr1_3:5065067-5065086 | None:intergenic | 45.0% |
| ! | GAATTAGGGTGTTCCTCCTT+CGG | + | chr1_3:5065068-5065087 | None:intergenic | 45.0% |
| ! | AAAGTATCCCACAGCACATG+TGG | - | chr1_3:5065432-5065451 | Msa0099030:intron | 45.0% |
| CAAGAATTCCACATGTGCTG+TGG | + | chr1_3:5065443-5065462 | None:intergenic | 45.0% | |
| ATGGGTCAGTTATTCCGAGA+CGG | - | chr1_3:5066028-5066047 | Msa0099030:intron | 45.0% | |
| ACGATGTGAAATACACCCTC+CGG | + | chr1_3:5067069-5067088 | None:intergenic | 45.0% | |
| ! | GGTATTTGGTTCGAGATCTG+GGG | + | chr1_3:5067426-5067445 | None:intergenic | 45.0% |
| ! | GAGGTATTTGGTTCGAGATC+TGG | + | chr1_3:5067428-5067447 | None:intergenic | 45.0% |
| CATCAATCGAGTTACTCACG+TGG | - | chr1_3:5067506-5067525 | Msa0099030:intron | 45.0% | |
| TCGAGTTACTCACGTGGAAA+CGG | - | chr1_3:5067512-5067531 | Msa0099030:intron | 45.0% | |
| GATGCATGGATCTCCATTGA+CGG | - | chr1_3:5067883-5067902 | Msa0099030:intron | 45.0% | |
| GGAATGCATCAGTGACATCT+TGG | + | chr1_3:5067981-5068000 | None:intergenic | 45.0% | |
| CATCTCCAAAACTTTGCCAC+TGG | - | chr1_3:5068030-5068049 | Msa0099030:intron | 45.0% | |
| ! | AACTGCCAGTGGCAAAGTTT+TGG | + | chr1_3:5068038-5068057 | None:intergenic | 45.0% |
| ! | CGTGCTTTCTGGAGGATTAA+TGG | - | chr1_3:5068239-5068258 | Msa0099030:intron | 45.0% |
| !! | GGTTGGATTGGTCATGATTC+TGG | - | chr1_3:5068282-5068301 | Msa0099030:intron | 45.0% |
| TCTTGGTCAGTTACCAGCAT+TGG | - | chr1_3:5068553-5068572 | Msa0099030:intron | 45.0% | |
| AGCCTAGCAAAACACATCAC+AGG | + | chr1_3:5068588-5068607 | None:intergenic | 45.0% | |
| !!! | GGTTGGCTCTGTTTTGGATT+TGG | - | chr1_3:5068682-5068701 | Msa0099030:intron | 45.0% |
| GTTTACCTAATTGGGGTGAG+AGG | - | chr1_3:5068724-5068743 | Msa0099030:intron | 45.0% | |
| AAAACCCTCTCACCCCAATT+AGG | + | chr1_3:5068732-5068751 | None:intergenic | 45.0% | |
| TGTTTATGTTGGTCCACCGA+CGG | - | chr1_3:5068824-5068843 | Msa0099030:intron | 45.0% | |
| TCAAACCAATCATGAGCCGT+CGG | + | chr1_3:5068843-5068862 | None:intergenic | 45.0% | |
| TGGTTTGAGAAGCAAGCTCA+TGG | - | chr1_3:5068855-5068874 | Msa0099030:intron | 45.0% | |
| !! | TGGATGGATTGGTTTCATGG+TGG | - | chr1_3:5068903-5068922 | Msa0099030:intron | 45.0% |
| ATTTGTTTCCGCGTCTTCCA+CGG | - | chr1_3:5068949-5068968 | Msa0099030:CDS | 45.0% | |
| AAATTACACCGTGGAAGACG+CGG | + | chr1_3:5068960-5068979 | None:intergenic | 45.0% | |
| GTCTTCCACGGTGTAATTTG+AGG | - | chr1_3:5068961-5068980 | Msa0099030:CDS | 45.0% | |
| GGCAAGGGATCTTACTAAAC+CGG | - | chr1_3:5069100-5069119 | Msa0099030:CDS | 45.0% | |
| !!! | AATAATTATTTTAAAAATTG+TGG | - | chr1_3:5062119-5062138 | Msa0099030:intron | 5.0% |
| !!! | TTGATTTTTTTTTTTTTTTA+AGG | + | chr1_3:5062221-5062240 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAATATTTGA+AGG | + | chr1_3:5066464-5066483 | None:intergenic | 5.0% |
| !!! | AAAAAATTACTTTTATTTTT+GGG | + | chr1_3:5067584-5067603 | None:intergenic | 5.0% |
| !!! | AAAAAAATTACTTTTATTTT+TGG | + | chr1_3:5067585-5067604 | None:intergenic | 5.0% |
| !! | GGAATGCTGCTTTGCAAGCT+CGG | - | chr1_3:5057972-5057991 | Msa0099030:CDS | 50.0% |
| !! | GAATGCTGCTTTGCAAGCTC+GGG | - | chr1_3:5057973-5057992 | Msa0099030:CDS | 50.0% |
| GCCGCATAAGGAAATCGAAC+AGG | + | chr1_3:5058284-5058303 | None:intergenic | 50.0% | |
| TTTGGCATCCAGGTTCTGTC+GGG | + | chr1_3:5058702-5058721 | None:intergenic | 50.0% | |
| ! | GGCCGGTTTAACCTAGCAAA+AGG | - | chr1_3:5059641-5059660 | Msa0099030:intron | 50.0% |
| CCAGATCCACATATTCTGCG+AGG | + | chr1_3:5060388-5060407 | None:intergenic | 50.0% | |
| CCTCGCAGAATATGTGGATC+TGG | - | chr1_3:5060385-5060404 | Msa0099030:intron | 50.0% | |
| ACTACCGCGTCATTATTGCC+AGG | - | chr1_3:5060558-5060577 | Msa0099030:intron | 50.0% | |
| GAGTTTGAGCACCACTCATC+TGG | - | chr1_3:5060639-5060658 | Msa0099030:intron | 50.0% | |
| GTTACTAAAAGCAGGAGGGG+GGG | - | chr1_3:5060858-5060877 | Msa0099030:intron | 50.0% | |
| AGTTAGAAGGGGCAAGCAAG+TGG | + | chr1_3:5062442-5062461 | None:intergenic | 50.0% | |
| ! | AAGAAACTTAGGGGTGGGCT+TGG | - | chr1_3:5062482-5062501 | Msa0099030:intron | 50.0% |
| AGGCTGGTATTACTGTACCC+AGG | - | chr1_3:5062971-5062990 | Msa0099030:intron | 50.0% | |
| !! | GTTCGGTTCGGTTAACCGTT+CGG | - | chr1_3:5063036-5063055 | Msa0099030:intron | 50.0% |
| !! | TTCGGTTCGGTTAACCGGTT+CGG | - | chr1_3:5063140-5063159 | Msa0099030:intron | 50.0% |
| TGCAAGATACGCAGGGGATA+CGG | + | chr1_3:5064084-5064103 | None:intergenic | 50.0% | |
| TATCGGTGCAAGATACGCAG+GGG | + | chr1_3:5064090-5064109 | None:intergenic | 50.0% | |
| GATATCGGTGCAAGATACGC+AGG | + | chr1_3:5064092-5064111 | None:intergenic | 50.0% | |
| !! | GGGAAGTATCGGGCAGATAT+CGG | + | chr1_3:5064107-5064126 | None:intergenic | 50.0% |
| ! | CGGGACGTATCGGAAAGTAT+CGG | + | chr1_3:5064187-5064206 | None:intergenic | 50.0% |
| TTTGGCCACCGTTGAAGTCT+TGG | - | chr1_3:5064426-5064445 | Msa0099030:intron | 50.0% | |
| CGATACCAAGACTTCAACGG+TGG | + | chr1_3:5064434-5064453 | None:intergenic | 50.0% | |
| ! | GTCTTGGTATCGGACGACTT+TGG | - | chr1_3:5064442-5064461 | Msa0099030:intron | 50.0% |
| ACTACACCGATACGCCGATA+CGG | + | chr1_3:5064678-5064697 | None:intergenic | 50.0% | |
| CCCGGATACGAGATACGATA+CGG | + | chr1_3:5064708-5064727 | None:intergenic | 50.0% | |
| CCGTATCGTATCTCGTATCC+GGG | - | chr1_3:5064705-5064724 | Msa0099030:intron | 50.0% | |
| ! | ACGGAATTGGTGATAGGCTG+TGG | + | chr1_3:5064733-5064752 | None:intergenic | 50.0% |
| ! | ATTAGGGTGTTCCTCCTTCG+GGG | + | chr1_3:5065066-5065085 | None:intergenic | 50.0% |
| TGGAGATGTGGCTCAATTGG+TGG | + | chr1_3:5065398-5065417 | None:intergenic | 50.0% | |
| !! | AAGCGACGCTTTTGGAGATG+TGG | + | chr1_3:5065410-5065429 | None:intergenic | 50.0% |
| CACAAGTTACACCCACTACG+TGG | - | chr1_3:5065484-5065503 | Msa0099030:intron | 50.0% | |
| CAAGCGAGTTTCCACGTAGT+GGG | + | chr1_3:5065498-5065517 | None:intergenic | 50.0% | |
| TCAAGCGAGTTTCCACGTAG+TGG | + | chr1_3:5065499-5065518 | None:intergenic | 50.0% | |
| GTCAGTTATTCCGAGACGGA+GGG | - | chr1_3:5066032-5066051 | Msa0099030:intron | 50.0% | |
| GCGATGAGTTGCACGTTTGA+AGG | + | chr1_3:5067231-5067250 | None:intergenic | 50.0% | |
| ! | GAAGGGTGTGAGAATGTGTG+TGG | + | chr1_3:5067745-5067764 | None:intergenic | 50.0% |
| GTCGTAGATCTTGCCGTCAA+TGG | + | chr1_3:5067899-5067918 | None:intergenic | 50.0% | |
| TGCATCAGTGACATCTTGGC+CGG | + | chr1_3:5067977-5067996 | None:intergenic | 50.0% | |
| GATGTCTGTAAGCGGATGGA+GGG | + | chr1_3:5068014-5068033 | None:intergenic | 50.0% | |
| AGATGTCTGTAAGCGGATGG+AGG | + | chr1_3:5068015-5068034 | None:intergenic | 50.0% | |
| TGGAGATGTCTGTAAGCGGA+TGG | + | chr1_3:5068018-5068037 | None:intergenic | 50.0% | |
| TTAGTGCACGTGCTTTCTGG+AGG | - | chr1_3:5068231-5068250 | Msa0099030:intron | 50.0% | |
| TTTGAGGAATGCGGCTTTGC+AGG | - | chr1_3:5069079-5069098 | Msa0099030:CDS | 50.0% | |
| ATCTGTTTCCGCGGCTACCT+CGG | - | chr1_3:5057837-5057856 | Msa0099030:CDS | 55.0% | |
| ! | GGCTACCTCGGTGTAGTCTA+AGG | - | chr1_3:5057849-5057868 | Msa0099030:CDS | 55.0% |
| AGCAGCATAAGGAAGGAGCC+AGG | + | chr1_3:5058435-5058454 | None:intergenic | 55.0% | |
| AAAAGGAGTGGCGCGTCACT+TGG | - | chr1_3:5059658-5059677 | Msa0099030:intron | 55.0% | |
| AAAGGAGTGGCGCGTCACTT+GGG | - | chr1_3:5059659-5059678 | Msa0099030:intron | 55.0% | |
| GCGAGGACTAGAACCGTGAA+TGG | + | chr1_3:5060371-5060390 | None:intergenic | 55.0% | |
| ! | ACTTAGGGGTGGGCTTGGTT+CGG | - | chr1_3:5062487-5062506 | Msa0099030:intron | 55.0% |
| GGCATGAGCATAACAGAGGC+TGG | - | chr1_3:5062955-5062974 | Msa0099030:intron | 55.0% | |
| ! | GTGGCATTTAGGGTGGGTGT+GGG | - | chr1_3:5063242-5063261 | Msa0099030:intron | 55.0% |
| CCGTGTGTATCGGGACGTAT+CGG | + | chr1_3:5064197-5064216 | None:intergenic | 55.0% | |
| CCGATACGTCCCGATACACA+CGG | - | chr1_3:5064194-5064213 | Msa0099030:intron | 55.0% | |
| AAAGTGGACGGCGACCACTT+TGG | + | chr1_3:5064409-5064428 | None:intergenic | 55.0% | |
| AAAGTGGTCGCCGTCCACTT+TGG | - | chr1_3:5064408-5064427 | Msa0099030:intron | 55.0% | |
| TCAACGGTGGCCAAAGTGGA+CGG | + | chr1_3:5064421-5064440 | None:intergenic | 55.0% | |
| GACTTCAACGGTGGCCAAAG+TGG | + | chr1_3:5064425-5064444 | None:intergenic | 55.0% | |
| ! | ACACCAACAAAGCACCCCGA+AGG | - | chr1_3:5065049-5065068 | Msa0099030:intron | 55.0% |
| GGTCAGTTATTCCGAGACGG+AGG | - | chr1_3:5066031-5066050 | Msa0099030:intron | 55.0% | |
| AGGTGGGGATAGGGTCAATC+AGG | + | chr1_3:5067660-5067679 | None:intergenic | 55.0% | |
| AAATGGGCCAACCACCATCC+CGG | - | chr1_3:5067925-5067944 | Msa0099030:intron | 55.0% | |
| GTCACGTAGGTAACTGCCAG+TGG | + | chr1_3:5068049-5068068 | None:intergenic | 55.0% | |
| CAGAGACGACGTAGTCACGT+AGG | + | chr1_3:5068062-5068081 | None:intergenic | 55.0% | |
| GCGTTAGTGCACGTGCTTTC+TGG | - | chr1_3:5068228-5068247 | Msa0099030:intron | 55.0% | |
| AACCAATCATGAGCCGTCGG+TGG | + | chr1_3:5068840-5068859 | None:intergenic | 55.0% | |
| GAATGCGGCTTTGCAGGCAA+GGG | - | chr1_3:5069085-5069104 | Msa0099030:CDS | 55.0% | |
| GAGGTAGCCGCGGAAACAGA+TGG | + | chr1_3:5057838-5057857 | None:intergenic | 60.0% | |
| AGACTACACCGAGGTAGCCG+CGG | + | chr1_3:5057848-5057867 | None:intergenic | 60.0% | |
| ! | GACGCGCCACTCCTTTTGCT+AGG | + | chr1_3:5059655-5059674 | None:intergenic | 60.0% |
| CTGCGCATCATAGAAGGGGC+TGG | - | chr1_3:5060222-5060241 | Msa0099030:intron | 60.0% | |
| ! | GGTGGCATTTAGGGTGGGTG+TGG | - | chr1_3:5063241-5063260 | Msa0099030:intron | 60.0% |
| TGGTGTGGTGTGGGTCGTAC+TGG | + | chr1_3:5064332-5064351 | None:intergenic | 60.0% | |
| TGGTGATAGGCTGTGGAGCC+CGG | + | chr1_3:5064726-5064745 | None:intergenic | 60.0% | |
| ! | CCTCCTTCGGGGTGCTTTGT+TGG | + | chr1_3:5065055-5065074 | None:intergenic | 60.0% |
| ! | CCAACAAAGCACCCCGAAGG+AGG | - | chr1_3:5065052-5065071 | Msa0099030:intron | 60.0% |
| ACAACACTCGCGGCGATGCA+TGG | - | chr1_3:5067869-5067888 | Msa0099030:intron | 60.0% | |
| CTTCCTCTCCTCAACCTCGC+CGG | - | chr1_3:5067955-5067974 | Msa0099030:intron | 60.0% | |
| GTCTGTAAGCGGATGGAGGG+TGG | + | chr1_3:5068011-5068030 | None:intergenic | 60.0% | |
| GTCCACCGACGGCTCATGAT+TGG | - | chr1_3:5068835-5068854 | Msa0099030:intron | 60.0% | |
| GGAATGCGGCTTTGCAGGCA+AGG | - | chr1_3:5069084-5069103 | Msa0099030:CDS | 60.0% | |
| CATCTTGGCCGGCGAGGTTG+AGG | + | chr1_3:5067966-5067985 | None:intergenic | 65.0% | |
| CAGTGACATCTTGGCCGGCG+AGG | + | chr1_3:5067972-5067991 | None:intergenic | 65.0% | |
| CGGATGGAGGGTGGAAAGCG+AGG | + | chr1_3:5068002-5068021 | None:intergenic | 65.0% | |
| TGGGCCAACCACCATCCCGG+CGG | - | chr1_3:5067928-5067947 | Msa0099030:intron | 70.0% | |
| AGGAGAGGAAGCTCGCCGCC+GGG | + | chr1_3:5067946-5067965 | None:intergenic | 70.0% | |
| GAGGAGAGGAAGCTCGCCGC+CGG | + | chr1_3:5067947-5067966 | None:intergenic | 70.0% | |
| TGGCCGGCGAGGTTGAGGAG+AGG | + | chr1_3:5067961-5067980 | None:intergenic | 70.0% | |
| ! | CTCGCCGCCGGGATGGTGGT+TGG | + | chr1_3:5067935-5067954 | None:intergenic | 75.0% |
| GAAGCTCGCCGCCGGGATGG+TGG | + | chr1_3:5067939-5067958 | None:intergenic | 75.0% | |
| GAGGAAGCTCGCCGCCGGGA+TGG | + | chr1_3:5067942-5067961 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 5057794 | 5069166 | 5057794 | ID=Msa0099030;Name=Msa0099030 |
| chr1_3 | mRNA | 5057794 | 5069166 | 5057794 | ID=Msa0099030-mRNA-1;Parent=Msa0099030;Name=Msa0099030-mRNA-1;_AED=0.31;_eAED=0.32;_QI=0|0|0|1|0|0|4|0|594 |
| chr1_3 | exon | 5068924 | 5069166 | 5068924 | ID=Msa0099030-mRNA-1:exon:1797;Parent=Msa0099030-mRNA-1 |
| chr1_3 | exon | 5066626 | 5066819 | 5066626 | ID=Msa0099030-mRNA-1:exon:1796;Parent=Msa0099030-mRNA-1 |
| chr1_3 | exon | 5066584 | 5066621 | 5066584 | ID=Msa0099030-mRNA-1:exon:1795;Parent=Msa0099030-mRNA-1 |
| chr1_3 | exon | 5057794 | 5059103 | 5057794 | ID=Msa0099030-mRNA-1:exon:1794;Parent=Msa0099030-mRNA-1 |
| chr1_3 | CDS | 5068924 | 5069166 | 5068924 | ID=Msa0099030-mRNA-1:cds;Parent=Msa0099030-mRNA-1 |
| chr1_3 | CDS | 5066626 | 5066819 | 5066626 | ID=Msa0099030-mRNA-1:cds;Parent=Msa0099030-mRNA-1 |
| chr1_3 | CDS | 5066584 | 5066621 | 5066584 | ID=Msa0099030-mRNA-1:cds;Parent=Msa0099030-mRNA-1 |
| chr1_3 | CDS | 5057794 | 5059103 | 5057794 | ID=Msa0099030-mRNA-1:cds;Parent=Msa0099030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
