Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100450 | sp|Q84VX3|ALF4_ARATH | 41.849 | 595 | 286 | 11 | 31 | 592 | 57 | 624 | 3.37e-123 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100450 | G7JLV4 | 84.434 | 636 | 26 | 7 | 1 | 595 | 1 | 604 | 0.0 | 1045 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006410 | Msa0100450 | 0.816489 | 5.385455e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100450 | MtrunA17_Chr4g0005791 | 84.434 | 636 | 26 | 7 | 1 | 595 | 1 | 604 | 0.0 | 1045 |
| Msa0100450 | MtrunA17_Chr1g0149701 | 69.663 | 356 | 28 | 8 | 242 | 568 | 8 | 312 | 6.00e-155 | 447 |
| Msa0100450 | MtrunA17_Chr1g0149181 | 64.085 | 142 | 47 | 3 | 152 | 293 | 3 | 140 | 1.17e-48 | 166 |
| Msa0100450 | MtrunA17_Chr1g0149691 | 62.963 | 81 | 29 | 1 | 84 | 163 | 42 | 122 | 3.26e-23 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100450 | AT5G11030.6 | 41.794 | 591 | 288 | 11 | 31 | 592 | 33 | 596 | 1.78e-124 | 380 |
| Msa0100450 | AT5G11030.2 | 41.849 | 595 | 286 | 11 | 31 | 592 | 57 | 624 | 3.43e-124 | 380 |
| Msa0100450 | AT5G11030.3 | 42.069 | 580 | 278 | 14 | 31 | 592 | 33 | 572 | 4.13e-116 | 357 |
| Msa0100450 | AT5G11030.1 | 42.123 | 584 | 276 | 14 | 31 | 592 | 57 | 600 | 8.93e-116 | 357 |
| Msa0100450 | AT5G11030.8 | 39.885 | 524 | 260 | 9 | 31 | 528 | 33 | 527 | 3.58e-99 | 312 |
| Msa0100450 | AT5G11030.4 | 39.321 | 501 | 251 | 8 | 31 | 505 | 33 | 506 | 2.33e-91 | 291 |
| Msa0100450 | AT5G11030.5 | 39.321 | 501 | 251 | 8 | 31 | 505 | 33 | 506 | 2.33e-91 | 291 |
| Msa0100450 | AT5G11030.7 | 39.321 | 501 | 251 | 8 | 31 | 505 | 33 | 506 | 2.33e-91 | 291 |
| Msa0100450 | AT5G11030.9 | 39.905 | 421 | 211 | 6 | 31 | 436 | 33 | 426 | 3.50e-89 | 283 |
Find 171 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTGTAGATTGCCATTT+TGG | 0.068680 | 1_3:-6918212 | Msa0100450:intron |
| ATGAAAAGTTGCTTAGTTTA+AGG | 0.110028 | 1_3:-6917049 | Msa0100450:three_prime_UTR |
| GGGCGAAGCAGCTCCGTTTC+TGG | 0.146414 | 1_3:-6924598 | Msa0100450:CDS |
| CAATTTCCTTGATTCTTTAT+TGG | 0.175564 | 1_3:-6923735 | Msa0100450:CDS |
| TTCTATGCTGTTATTCTTCA+TGG | 0.204426 | 1_3:-6917015 | Msa0100450:three_prime_UTR |
| ATTCGGTTTGATTGGGGATT+AGG | 0.209624 | 1_3:+6924850 | None:intergenic |
| TACATTGTTCCTCCTTTATC+AGG | 0.214930 | 1_3:-6921250 | Msa0100450:CDS |
| AACTCATTTGCTGTGTTAAA+AGG | 0.216226 | 1_3:-6918778 | Msa0100450:CDS |
| TGTCCTTGGGACAACATTTC+GGG | 0.246227 | 1_3:+6916885 | None:intergenic |
| AAGCATGGTTGCGCTCTTTC+AGG | 0.249819 | 1_3:-6919322 | Msa0100450:intron |
| TTCAATACATTAAGAATTAT+AGG | 0.272638 | 1_3:+6920017 | None:intergenic |
| TTCGGTTTGATTGGGGATTA+GGG | 0.277788 | 1_3:+6924851 | None:intergenic |
| ATCCAACTTGCAGGGGTATT+GGG | 0.282083 | 1_3:-6916795 | Msa0100450:three_prime_UTR |
| AATCTTTCAGGCTGTTAAAA+TGG | 0.290175 | 1_3:-6918836 | Msa0100450:intron |
| ATGTCCTTGGGACAACATTT+CGG | 0.290212 | 1_3:+6916884 | None:intergenic |
| ATCCCCAATCAAACCGAATA+GGG | 0.295176 | 1_3:-6924846 | Msa0100450:five_prime_UTR |
| CCATTCCAATTCACAAACTA+TGG | 0.303989 | 1_3:+6916848 | None:intergenic |
| ACACCAACTCGAGTGGATTA+AGG | 0.307493 | 1_3:+6917416 | None:intergenic |
| GCTGGTGTGCTTTGTGCTGC+TGG | 0.309587 | 1_3:+6924814 | None:intergenic |
| CTGGCTGCTTAACCCCTATT+CGG | 0.317433 | 1_3:+6924833 | None:intergenic |
| AACCCCTATTCGGTTTGATT+GGG | 0.318088 | 1_3:+6924843 | None:intergenic |
| CTGAAGACCATACAAGCTTT+TGG | 0.318173 | 1_3:+6916954 | None:intergenic |
| AACTTCCATAGTTTGTGAAT+TGG | 0.326885 | 1_3:-6916853 | Msa0100450:three_prime_UTR |
| TATCCAACTTGCAGGGGTAT+TGG | 0.329415 | 1_3:-6916796 | Msa0100450:three_prime_UTR |
| GACGCCTCCGGATGGATATA+AGG | 0.343902 | 1_3:+6920066 | None:intergenic |
| TTGGTACTTTAGGGCATGAT+TGG | 0.348785 | 1_3:+6924541 | None:intergenic |
| TAACCCCTATTCGGTTTGAT+TGG | 0.348979 | 1_3:+6924842 | None:intergenic |
| AAAGGAAGGTATTTATGAAT+TGG | 0.351445 | 1_3:+6917126 | None:intergenic |
| TCTGTTTCCTTTATTCCTGC+TGG | 0.361930 | 1_3:+6924786 | None:intergenic |
| CCCTTTGAGAGCCCTGATAA+AGG | 0.363520 | 1_3:+6921238 | None:intergenic |
| TATAATTCTTAATGTATTGA+AGG | 0.365795 | 1_3:-6920015 | Msa0100450:CDS |
| AGTGAATTTATCCAACTTGC+AGG | 0.368304 | 1_3:-6916804 | Msa0100450:three_prime_UTR |
| AGTCACATAACCTGTCTTCT+TGG | 0.368314 | 1_3:-6917353 | Msa0100450:exon |
| TCATTATTACAAATCTGTAT+AGG | 0.373134 | 1_3:+6917863 | None:intergenic |
| AGAAAATAAAGATGATTATA+TGG | 0.373800 | 1_3:-6919362 | Msa0100450:CDS |
| GGCGAAGCAGCTCCGTTTCT+GGG | 0.376733 | 1_3:-6924597 | Msa0100450:CDS |
| AAAATATTTCAAAGATACTT+TGG | 0.380615 | 1_3:+6917330 | None:intergenic |
| CACATCCAGATATATCATTC+TGG | 0.382915 | 1_3:-6918105 | Msa0100450:CDS |
| AATCCCCAATCAAACCGAAT+AGG | 0.387165 | 1_3:-6924847 | Msa0100450:five_prime_UTR |
| AAGGCTGTTTCAAAGTTTGC+TGG | 0.387511 | 1_3:-6922954 | Msa0100450:CDS |
| ATTTAATTGAAACAGACATT+AGG | 0.390893 | 1_3:-6921304 | Msa0100450:intron |
| CCGAACAAGATCAACCAAAA+TGG | 0.392279 | 1_3:+6918198 | None:intergenic |
| GCGGCTTCCAGCAGGAATAA+AGG | 0.405400 | 1_3:-6924793 | Msa0100450:five_prime_UTR |
| TTCTCTTTATGCTCATTGTC+CGG | 0.411566 | 1_3:+6923695 | None:intergenic |
| GGAGTCCAGAATGATATATC+TGG | 0.413275 | 1_3:+6918100 | None:intergenic |
| GCTTGGTAGTTGGAAGAAGT+TGG | 0.416529 | 1_3:-6923797 | Msa0100450:intron |
| GATGTTCCTCTGGTGGTCTC+TGG | 0.423216 | 1_3:+6924761 | None:intergenic |
| TGACGTACTACTGGAGATTT+CGG | 0.425531 | 1_3:+6918162 | None:intergenic |
| GCAGGAACCGAAAACATAAC+AGG | 0.426045 | 1_3:-6924713 | Msa0100450:five_prime_UTR |
| AAGTTCACCAAAAGCTTGTA+TGG | 0.430358 | 1_3:-6916961 | Msa0100450:three_prime_UTR |
| GGTGAACTTGCAAACTCGAT+TGG | 0.436914 | 1_3:+6916975 | None:intergenic |
| TACACTAGTGACAGGTATAA+TGG | 0.441196 | 1_3:-6917488 | Msa0100450:CDS |
| AACTTATGATGTCGAGGTTG+TGG | 0.443126 | 1_3:-6919493 | Msa0100450:CDS |
| GGATGCTGCTCTTTCTGATC+CGG | 0.444927 | 1_3:-6923714 | Msa0100450:CDS |
| CACCAACTCGAGTGGATTAA+GGG | 0.445019 | 1_3:+6917417 | None:intergenic |
| AATGAATGCATCGCGGTTTG+TGG | 0.445871 | 1_3:+6924655 | None:intergenic |
| GCAAACTTTGAAACAGCCTT+TGG | 0.451372 | 1_3:+6922957 | None:intergenic |
| TAAGTCTGCCGTGGGAGTTA+AGG | 0.460107 | 1_3:-6919075 | Msa0100450:intron |
| ATCGATATAAGTACCTGAAA+AGG | 0.462072 | 1_3:-6917092 | Msa0100450:three_prime_UTR |
| TTGTTCTCCGTCTCTTGACC+AGG | 0.468596 | 1_3:-6923633 | Msa0100450:CDS |
| CCATAGTTTGTGAATTGGAA+TGG | 0.469887 | 1_3:-6916848 | Msa0100450:three_prime_UTR |
| GTGAACTTGCAAACTCGATT+GGG | 0.470105 | 1_3:+6916976 | None:intergenic |
| GTGCTTTGTTATTAATATGT+TGG | 0.473008 | 1_3:+6918125 | None:intergenic |
| CTTGCTGAAACTGACGCCTC+CGG | 0.473962 | 1_3:+6920054 | None:intergenic |
| GATACTTTGGCCAAGAAGAC+AGG | 0.475042 | 1_3:+6917343 | None:intergenic |
| TTCGTAATAACCAGATCAAA+AGG | 0.475606 | 1_3:-6919138 | Msa0100450:intron |
| GACATTAGGTTACTCAAGTA+AGG | 0.477643 | 1_3:-6921290 | Msa0100450:CDS |
| TTATTCCTGCTGGAAGCCGC+TGG | 0.478081 | 1_3:+6924796 | None:intergenic |
| GACTCCCAGCGTCCTTGAGT+TGG | 0.478137 | 1_3:-6918083 | Msa0100450:CDS |
| TAAACAAGGTCTACAATGAA+TGG | 0.478869 | 1_3:-6917525 | Msa0100450:CDS |
| TCCCAGCGTCCTTGAGTTGG+TGG | 0.487298 | 1_3:-6918080 | Msa0100450:CDS |
| TTGTTGAGCTGATGTTCCTC+TGG | 0.487713 | 1_3:+6924751 | None:intergenic |
| TTTCAGTCCTTATATCCATC+CGG | 0.489686 | 1_3:-6920073 | Msa0100450:intron |
| ATATGACGTTTGCAATAAGT+TGG | 0.490710 | 1_3:-6919922 | Msa0100450:CDS |
| ATGAATGCATCGCGGTTTGT+GGG | 0.491958 | 1_3:+6924656 | None:intergenic |
| GTCAATTCTAAGACCTCCAC+AGG | 0.493653 | 1_3:-6918056 | Msa0100450:CDS |
| CATATCTTCTTTAGCAGCAT+GGG | 0.497632 | 1_3:+6919180 | None:intergenic |
| AGACACATGCACATCATGTA+TGG | 0.498002 | 1_3:+6916770 | None:intergenic |
| CGGAGCTGCTTCGCCCTCTA+CGG | 0.504258 | 1_3:+6924605 | None:intergenic |
| AAGTTACGACTCTATGTCCT+TGG | 0.506562 | 1_3:+6916871 | None:intergenic |
| GTGAATTTATCCAACTTGCA+GGG | 0.510208 | 1_3:-6916803 | Msa0100450:three_prime_UTR |
| CTTGCAAACTCGATTGGGAT+AGG | 0.511267 | 1_3:+6916981 | None:intergenic |
| ACATTGTTCCTCCTTTATCA+GGG | 0.511603 | 1_3:-6921249 | Msa0100450:CDS |
| CACTCGAGTTGGTGTTGTAT+CGG | 0.512939 | 1_3:-6917408 | Msa0100450:CDS |
| CATATAGACCAAGGAGAGAT+CGG | 0.514534 | 1_3:+6919772 | None:intergenic |
| TCCTTTATCAGGGCTCTCAA+AGG | 0.515907 | 1_3:-6921239 | Msa0100450:CDS |
| AAGGGTGCATAGAGTATCAA+TGG | 0.517976 | 1_3:+6917435 | None:intergenic |
| TACATTAAGAATTATAGGAA+TGG | 0.518279 | 1_3:+6920022 | None:intergenic |
| AGCAGCACAAAGCACACCAG+CGG | 0.518874 | 1_3:-6924812 | Msa0100450:five_prime_UTR |
| CTTAGCAAACTGTGGCATGT+TGG | 0.521923 | 1_3:+6916927 | None:intergenic |
| TCCAACTTGCAGGGGTATTG+GGG | 0.522480 | 1_3:-6916794 | Msa0100450:three_prime_UTR |
| CGCATCACTCTGCTCTGGTA+GGG | 0.523614 | 1_3:+6918021 | None:intergenic |
| TCATATCTTCTTTAGCAGCA+TGG | 0.524554 | 1_3:+6919179 | None:intergenic |
| CAATGCATTTGAAGCTCTGT+CGG | 0.526309 | 1_3:-6923672 | Msa0100450:CDS |
| ACCCCTATTCGGTTTGATTG+GGG | 0.526514 | 1_3:+6924844 | None:intergenic |
| TTCTTACTTTGCATCACAGA+TGG | 0.526889 | 1_3:-6919034 | Msa0100450:CDS |
| ACCGAAAACATAACAGGCCC+AGG | 0.527538 | 1_3:-6924707 | Msa0100450:five_prime_UTR |
| TTGGCATATAAGACGACCAC+TGG | 0.528667 | 1_3:+6918978 | None:intergenic |
| GAGAAGTTCCGATCTCTCCT+TGG | 0.530482 | 1_3:-6919780 | Msa0100450:CDS |
| CAGCATCCAATAAAGAATCA+AGG | 0.532044 | 1_3:+6923729 | None:intergenic |
| TCCACCAACTCAAGGACGCT+GGG | 0.532275 | 1_3:+6918079 | None:intergenic |
| TCACGAATTGCATCATATTG+TGG | 0.532279 | 1_3:-6919540 | Msa0100450:CDS |
| AACAGCCTTTGGCACTTCAA+AGG | 0.533231 | 1_3:+6922968 | None:intergenic |
| TCTATATGTCCTGCAGTGCT+TGG | 0.539368 | 1_3:-6919757 | Msa0100450:intron |
| TTCCTTTGTAAGTCTGCCGT+GGG | 0.539665 | 1_3:-6919083 | Msa0100450:intron |
| CCTTTATCAGGGCTCTCAAA+GGG | 0.540181 | 1_3:-6921238 | Msa0100450:intron |
| TCTTTCCTTTGAAGTGCCAA+AGG | 0.541722 | 1_3:-6922973 | Msa0100450:CDS |
| CCGCATCACTCTGCTCTGGT+AGG | 0.541825 | 1_3:+6918020 | None:intergenic |
| CTCCACCAACTCAAGGACGC+TGG | 0.545716 | 1_3:+6918078 | None:intergenic |
| TTTCCTTTGTAAGTCTGCCG+TGG | 0.548311 | 1_3:-6919084 | Msa0100450:intron |
| GCACACCAGCGGCTTCCAGC+AGG | 0.553231 | 1_3:-6924801 | Msa0100450:five_prime_UTR |
| TGAATGCATCGCGGTTTGTG+GGG | 0.554979 | 1_3:+6924657 | None:intergenic |
| CTCTGCTCTGGTAGGGAAGG+AGG | 0.557747 | 1_3:+6918028 | None:intergenic |
| AGTTACGACTCTATGTCCTT+GGG | 0.557899 | 1_3:+6916872 | None:intergenic |
| TGACGTTTGCAATAAGTTGG+TGG | 0.558002 | 1_3:-6919919 | Msa0100450:intron |
| AGAAGATATGACTGTGGTCA+AGG | 0.560239 | 1_3:-6919167 | Msa0100450:CDS |
| TGTTTATCTCATATCAAGCA+TGG | 0.560956 | 1_3:-6919337 | Msa0100450:CDS |
| AACAGGATGATGATGCTGCA+AGG | 0.566039 | 1_3:-6919803 | Msa0100450:intron |
| TCATAGCAAAATGTGGTCCA+AGG | 0.566129 | 1_3:-6922884 | Msa0100450:CDS |
| GTAATAATGACAGAATCTAC+AGG | 0.566314 | 1_3:-6917850 | Msa0100450:intron |
| AGAATTGAAAGCATATCCCT+TGG | 0.566650 | 1_3:+6922867 | None:intergenic |
| GAGCAATTACCAAGCACTGC+AGG | 0.566881 | 1_3:+6919748 | None:intergenic |
| TTCATGTCGATTTCCGTAGA+GGG | 0.567226 | 1_3:-6924618 | Msa0100450:CDS |
| AGGGAAGGAGGTCCTCCCTG+TGG | 0.567977 | 1_3:+6918040 | None:intergenic |
| GAAGGAGGTCCTCCCTGTGG+AGG | 0.569470 | 1_3:+6918043 | None:intergenic |
| TCCCCAATACCCCTGCAAGT+TGG | 0.571394 | 1_3:+6916793 | None:intergenic |
| GTTCATCATCGCAGTTTCCA+CGG | 0.571628 | 1_3:+6919005 | None:intergenic |
| AATACCGCATCACTCTGCTC+TGG | 0.572295 | 1_3:+6918016 | None:intergenic |
| GAAATTGACAAGCTCTGAGA+TGG | 0.573186 | 1_3:+6923751 | None:intergenic |
| TTGAGCTGATGTTCCTCTGG+TGG | 0.573349 | 1_3:+6924754 | None:intergenic |
| CTGAAACTGACGCCTCCGGA+TGG | 0.576080 | 1_3:+6920058 | None:intergenic |
| GACAACATTTCGGGACAACA+AGG | 0.577086 | 1_3:+6916894 | None:intergenic |
| TTTGGTTGATCTTGTTCGGA+GGG | 0.577528 | 1_3:-6918194 | Msa0100450:CDS |
| CCTTTGCGTACACTAGTGAC+AGG | 0.584142 | 1_3:-6917496 | Msa0100450:CDS |
| CACCCTTAATCCACTCGAGT+TGG | 0.584466 | 1_3:-6917419 | Msa0100450:CDS |
| TGAGCTTCAGAACCCAGAAA+CGG | 0.584727 | 1_3:+6924585 | None:intergenic |
| CAGAAACTAGTTAACTCGCC+TGG | 0.584834 | 1_3:+6923615 | None:intergenic |
| GAATGCATCGCGGTTTGTGG+GGG | 0.587263 | 1_3:+6924658 | None:intergenic |
| ACAGGATGATGATGCTGCAA+GGG | 0.588404 | 1_3:-6919802 | Msa0100450:intron |
| CATAGCAAAATGTGGTCCAA+GGG | 0.590386 | 1_3:-6922883 | Msa0100450:CDS |
| TTTCATGTCGATTTCCGTAG+AGG | 0.593069 | 1_3:-6924619 | Msa0100450:exon |
| GCATGTTTCCTTAACTCCCA+CGG | 0.595250 | 1_3:+6919067 | None:intergenic |
| TCACTCTGCTCTGGTAGGGA+AGG | 0.596311 | 1_3:+6918025 | None:intergenic |
| CCTGAAAAGGCTATTGAGTG+TGG | 0.596841 | 1_3:-6917079 | Msa0100450:three_prime_UTR |
| AACAATGTAACTCGCAGCGT+TGG | 0.598271 | 1_3:+6921264 | None:intergenic |
| CGATACAACACCAACTCGAG+TGG | 0.600850 | 1_3:+6917409 | None:intergenic |
| TCCCCAATCAAACCGAATAG+GGG | 0.608672 | 1_3:-6924845 | Msa0100450:five_prime_UTR |
| TGAATTTATCCAACTTGCAG+GGG | 0.612000 | 1_3:-6916802 | Msa0100450:three_prime_UTR |
| AGTTACAACTTATGATGTCG+AGG | 0.625717 | 1_3:-6919499 | Msa0100450:CDS |
| GTCGAGGAGTAGTTTAAACA+AGG | 0.628023 | 1_3:-6917539 | Msa0100450:CDS |
| ACAGGAAAGACAAACTACAC+TGG | 0.628349 | 1_3:-6917568 | Msa0100450:intron |
| TGTCCCGAAATGTTGTCCCA+AGG | 0.630551 | 1_3:-6916888 | Msa0100450:three_prime_UTR |
| GAATTGACTCCACCAACTCA+AGG | 0.639319 | 1_3:+6918071 | None:intergenic |
| GATCAGTTCATAGCAAAATG+TGG | 0.640409 | 1_3:-6922891 | Msa0100450:CDS |
| CAGTCCTTATATCCATCCGG+AGG | 0.641815 | 1_3:-6920070 | Msa0100450:CDS |
| TGGCATATAAGACGACCACT+GGG | 0.644008 | 1_3:+6918979 | None:intergenic |
| TAACTCGCCTGGTCAAGAGA+CGG | 0.650758 | 1_3:+6923626 | None:intergenic |
| ATCACAGATGGCGATATCCG+TGG | 0.668265 | 1_3:-6919022 | Msa0100450:CDS |
| CCTACCAGAGCAGAGTGATG+CGG | 0.671711 | 1_3:-6918020 | Msa0100450:intron |
| CCTGTCACTAGTGTACGCAA+AGG | 0.676146 | 1_3:+6917496 | None:intergenic |
| GTGAAAAGCTTAGCAAACTG+TGG | 0.676993 | 1_3:+6916919 | None:intergenic |
| TTTGAGAGCCCTGATAAAGG+AGG | 0.680190 | 1_3:+6921241 | None:intergenic |
| ACAACATTTCGGGACAACAA+GGG | 0.686267 | 1_3:+6916895 | None:intergenic |
| CAGACACCAGAGACCACCAG+AGG | 0.704398 | 1_3:-6924767 | Msa0100450:five_prime_UTR |
| ACTACACTGGAGTCTTGTCG+AGG | 0.706866 | 1_3:-6917555 | Msa0100450:CDS |
| ACTGCAGGACATATAGACCA+AGG | 0.711098 | 1_3:+6919763 | None:intergenic |
| GCGATGATGAACAGTCCCAG+TGG | 0.740985 | 1_3:-6918994 | Msa0100450:CDS |
| ATTCTAAGACCTCCACAGGG+AGG | 0.747990 | 1_3:-6918052 | Msa0100450:CDS |
| TCAATTCTAAGACCTCCACA+GGG | 0.759095 | 1_3:-6918055 | Msa0100450:CDS |
| TGCTAAAGAAGATATGACTG+TGG | 0.759409 | 1_3:-6919173 | Msa0100450:CDS |
| GTTTCAGAATGAATGCATCG+CGG | 0.769510 | 1_3:+6924648 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGATATCTTTAATTAA+TGG | + | chr1_3:6918877-6918896 | None:intergenic | 10.0% |
| !! | ATTAATTAAAGATATCAAAT+TGG | - | chr1_3:6918876-6918895 | Msa0100450:intron | 10.0% |
| !!! | AACAATAATAATAACTTTTA+AGG | - | chr1_3:6921292-6921311 | Msa0100450:CDS | 10.0% |
| !! | AAATTAGAGAAAAAAATAGT+TGG | + | chr1_3:6917116-6917135 | None:intergenic | 15.0% |
| !! | TATTACTTCAAGATTATTTA+CGG | + | chr1_3:6917161-6917180 | None:intergenic | 15.0% |
| !!! | AAAAGTTGAAAGTATAAAAA+TGG | - | chr1_3:6917744-6917763 | Msa0100450:intron | 15.0% |
| !!! | AAAGTTGAAAGTATAAAAAT+GGG | - | chr1_3:6917745-6917764 | Msa0100450:intron | 15.0% |
| !! | AATAGTAAGAACTAAAATAT+TGG | + | chr1_3:6920145-6920164 | None:intergenic | 15.0% |
| !!! | ACATTTTATTTGTTTAGTTT+CGG | - | chr1_3:6920280-6920299 | Msa0100450:intron | 15.0% |
| !!! | AACAAATCTTATTTTGAAAT+TGG | - | chr1_3:6921228-6921247 | Msa0100450:intron | 15.0% |
| !! | TTCAATACATTAAGAATTAT+AGG | + | chr1_3:6921621-6921640 | None:intergenic | 15.0% |
| !! | TATAATTCTTAATGTATTGA+AGG | - | chr1_3:6921620-6921639 | Msa0100450:intron | 15.0% |
| !! | AGAAAATAAAGATGATTATA+TGG | - | chr1_3:6922273-6922292 | Msa0100450:intron | 15.0% |
| !! | AAAAGAAATCATAATACAAA+AGG | + | chr1_3:6922374-6922393 | None:intergenic | 15.0% |
| !! | AAAAAAAATTCCAACTTAAA+AGG | + | chr1_3:6922908-6922927 | None:intergenic | 15.0% |
| !!! | TCTATTGACTAAAATTATAT+GGG | + | chr1_3:6923277-6923296 | None:intergenic | 15.0% |
| !!! | TTCTATTGACTAAAATTATA+TGG | + | chr1_3:6923278-6923297 | None:intergenic | 15.0% |
| !! | TATTAGAAAAATAGTGTTAA+AGG | - | chr1_3:6923301-6923320 | Msa0100450:intron | 15.0% |
| !! | ATTAGAAAAATAGTGTTAAA+GGG | - | chr1_3:6923302-6923321 | Msa0100450:intron | 15.0% |
| !! | AAAATATTTCAAAGATACTT+TGG | + | chr1_3:6924308-6924327 | None:intergenic | 15.0% |
| !!! | AGTATCTTTGAAATATTTTT+TGG | - | chr1_3:6924309-6924328 | Msa0100450:intron | 15.0% |
| !!! | AAAAAATAGTTGGTACTTTA+GGG | + | chr1_3:6917106-6917125 | None:intergenic | 20.0% |
| !!! | AAAAAAATAGTTGGTACTTT+AGG | + | chr1_3:6917107-6917126 | None:intergenic | 20.0% |
| !!! | TTACAAACTAGAATCATTTT+TGG | + | chr1_3:6917372-6917391 | None:intergenic | 20.0% |
| !!! | AGATTATGTAAAATTGATTC+CGG | + | chr1_3:6917527-6917546 | None:intergenic | 20.0% |
| !!! | TTCTATTTTCTAAGTCTATA+GGG | + | chr1_3:6918518-6918537 | None:intergenic | 20.0% |
| !!! | TTTCTATTTTCTAAGTCTAT+AGG | + | chr1_3:6918519-6918538 | None:intergenic | 20.0% |
| !!! | TGATTATTTATTGATTTGAC+AGG | - | chr1_3:6918626-6918645 | Msa0100450:intron | 20.0% |
| !! | TTGATATCTTTAATTAATGG+AGG | + | chr1_3:6918874-6918893 | None:intergenic | 20.0% |
| !! | AACAATTTAATTATCAGGAA+AGG | + | chr1_3:6918903-6918922 | None:intergenic | 20.0% |
| !! | CTACAAAAATATTCATTCAA+TGG | + | chr1_3:6919565-6919584 | None:intergenic | 20.0% |
| !!! | CATTTTTTTCAAAAACAAAC+AGG | - | chr1_3:6919676-6919695 | Msa0100450:intron | 20.0% |
| !!! | AAACTTTGATATTTCTATGT+AGG | + | chr1_3:6919987-6920006 | None:intergenic | 20.0% |
| !!! | AATTAAATTAACAGAAGCAT+AGG | + | chr1_3:6920319-6920338 | None:intergenic | 20.0% |
| !! | ATTTAATTGAAACAGACATT+AGG | - | chr1_3:6920331-6920350 | Msa0100450:intron | 20.0% |
| !! | TTGAAAGACATGTATTAAAA+AGG | - | chr1_3:6920844-6920863 | Msa0100450:intron | 20.0% |
| !! | TATCTTGTAAAAAATTACTC+TGG | + | chr1_3:6920918-6920937 | None:intergenic | 20.0% |
| !!! | ATGATATTCAAGTTGATATT+TGG | - | chr1_3:6921142-6921161 | Msa0100450:intron | 20.0% |
| !!! | ATTGTACATAACATTTTGTT+TGG | - | chr1_3:6921365-6921384 | Msa0100450:intron | 20.0% |
| !!! | TTGTACATAACATTTTGTTT+GGG | - | chr1_3:6921366-6921385 | Msa0100450:intron | 20.0% |
| !! | TACATTAAGAATTATAGGAA+TGG | + | chr1_3:6921616-6921635 | None:intergenic | 20.0% |
| !!! | TGTAATGAATTTTACTAAAG+TGG | + | chr1_3:6921960-6921979 | None:intergenic | 20.0% |
| !!! | TTCCTATTGATTGAAATTTA+TGG | - | chr1_3:6923187-6923206 | Msa0100450:intron | 20.0% |
| !!! | TTTTTCAAATACTATGAAAC+AGG | + | chr1_3:6923648-6923667 | None:intergenic | 20.0% |
| !! | TCATTATTACAAATCTGTAT+AGG | + | chr1_3:6923775-6923794 | None:intergenic | 20.0% |
| !!! | TATCGATTTTCAAGTAAAAA+AGG | + | chr1_3:6924530-6924549 | None:intergenic | 20.0% |
| ! | TATAAGCTATAGTGTATGTT+TGG | - | chr1_3:6917329-6917348 | Msa0100450:three_prime_UTR | 25.0% |
| !! | AGGTAAAGTGATTTATGTTT+TGG | + | chr1_3:6917489-6917508 | None:intergenic | 25.0% |
| !! | TAGTGATGATTTTATATGCT+TGG | - | chr1_3:6917821-6917840 | Msa0100450:intron | 25.0% |
| ! | CAATTTCCTTGATTCTTTAT+TGG | - | chr1_3:6917900-6917919 | Msa0100450:intron | 25.0% |
| ! | ATTTCACTGTTTCATAATGT+AGG | - | chr1_3:6918059-6918078 | Msa0100450:CDS | 25.0% |
| ! | TTGTACAATTGAAGAGTTTA+TGG | - | chr1_3:6918141-6918160 | Msa0100450:CDS | 25.0% |
| ! | AATTGAAGAGTTTATGGATT+TGG | - | chr1_3:6918147-6918166 | Msa0100450:CDS | 25.0% |
| !! | CTCATCCATCAATTTTAAAT+CGG | - | chr1_3:6918270-6918289 | Msa0100450:intron | 25.0% |
| !! | TCTATTTTCTAAGTCTATAG+GGG | + | chr1_3:6918517-6918536 | None:intergenic | 25.0% |
| ! | AACGCAACAATTTAATTATC+AGG | + | chr1_3:6918908-6918927 | None:intergenic | 25.0% |
| ! | TTATGTTAGGTACTAGATTT+GGG | + | chr1_3:6919240-6919259 | None:intergenic | 25.0% |
| ! | ATTATGTTAGGTACTAGATT+TGG | + | chr1_3:6919241-6919260 | None:intergenic | 25.0% |
| ! | AGGGTATGTAATAAAGAAAA+CGG | + | chr1_3:6919631-6919650 | None:intergenic | 25.0% |
| !! | TTTTCTTTATTACATACCCT+TGG | - | chr1_3:6919631-6919650 | Msa0100450:intron | 25.0% |
| !!! | TTTTTTCAAAAACAAACAGG+AGG | - | chr1_3:6919679-6919698 | Msa0100450:intron | 25.0% |
| !!! | TTTTTCAAAAACAAACAGGA+GGG | - | chr1_3:6919680-6919699 | Msa0100450:intron | 25.0% |
| !! | GATTTTTGTTAATAAGGGAT+GGG | - | chr1_3:6919714-6919733 | Msa0100450:intron | 25.0% |
| !! | ATTTTTGTTAATAAGGGATG+GGG | - | chr1_3:6919715-6919734 | Msa0100450:intron | 25.0% |
| !!! | AAGTAATTCTTTTAAGACTC+AGG | - | chr1_3:6919879-6919898 | Msa0100450:intron | 25.0% |
| ! | GAAATTCTAATTTGATGAAG+AGG | - | chr1_3:6919948-6919967 | Msa0100450:CDS | 25.0% |
| !! | ATATTTCTATGTAGGATCTT+GGG | + | chr1_3:6919979-6919998 | None:intergenic | 25.0% |
| ! | AAAAGGAAAAAAAACTCAAG+AGG | + | chr1_3:6920035-6920054 | None:intergenic | 25.0% |
| !! | TCTTAAAAAGAATTTGCTCT+AGG | + | chr1_3:6920072-6920091 | None:intergenic | 25.0% |
| ! | GAACTAAAATATTGGTGAAT+AGG | + | chr1_3:6920137-6920156 | None:intergenic | 25.0% |
| ! | AATGTTTACATTCTATTCCA+TGG | - | chr1_3:6920184-6920203 | Msa0100450:intron | 25.0% |
| !!! | CTTTTTTTAATACATAGCCA+TGG | + | chr1_3:6920204-6920223 | None:intergenic | 25.0% |
| ! | CATGGCTATGTATTAAAAAA+AGG | - | chr1_3:6920202-6920221 | Msa0100450:intron | 25.0% |
| ! | CATGTTTCTTTATTGAACAA+AGG | + | chr1_3:6920472-6920491 | None:intergenic | 25.0% |
| ! | CTTTGTTCAATAAAGAAACA+TGG | - | chr1_3:6920470-6920489 | Msa0100450:intron | 25.0% |
| ! | AGACATGTATTAAAAAGGAT+AGG | - | chr1_3:6920849-6920868 | Msa0100450:intron | 25.0% |
| ! | AGGTAATGTCTATTAAAGTT+TGG | - | chr1_3:6920869-6920888 | Msa0100450:intron | 25.0% |
| !!! | TAATTTTTTACAAGATAGCG+TGG | - | chr1_3:6920921-6920940 | Msa0100450:intron | 25.0% |
| ! | AAGTATTTCTTTGAGTAAAG+TGG | - | chr1_3:6921050-6921069 | Msa0100450:intron | 25.0% |
| ! | AAAATGTTCAATATTGCTCT+TGG | - | chr1_3:6921119-6921138 | Msa0100450:intron | 25.0% |
| ! | TTGTTTATTCTTCTCTGTAT+TGG | + | chr1_3:6921213-6921232 | None:intergenic | 25.0% |
| !!! | TGTACATAACATTTTGTTTG+GGG | - | chr1_3:6921367-6921386 | Msa0100450:intron | 25.0% |
| ! | AATGAACATGATAAAGTGAT+TGG | + | chr1_3:6921415-6921434 | None:intergenic | 25.0% |
| !! | CTTTATCATGTTCATTTTCT+AGG | - | chr1_3:6921419-6921438 | Msa0100450:intron | 25.0% |
| !! | ATGAATTTTACTAAAGTGGA+TGG | + | chr1_3:6921956-6921975 | None:intergenic | 25.0% |
| ! | ATTTATTTCGATGTTTACTC+AGG | - | chr1_3:6922208-6922227 | Msa0100450:intron | 25.0% |
| ! | TGGAAAAAATGGAATTTGAT+GGG | + | chr1_3:6922404-6922423 | None:intergenic | 25.0% |
| ! | TTATAGTGTAATCAAAAGTG+AGG | + | chr1_3:6922781-6922800 | None:intergenic | 25.0% |
| ! | TGATTACACTATAATCTTTC+AGG | - | chr1_3:6922787-6922806 | Msa0100450:intron | 25.0% |
| !!! | ATGAGTTTTTTCTATGTTCT+GGG | + | chr1_3:6922844-6922863 | None:intergenic | 25.0% |
| !!! | AATGAGTTTTTTCTATGTTC+TGG | + | chr1_3:6922845-6922864 | None:intergenic | 25.0% |
| ! | AATTTCAATCAATAGGAACT+AGG | + | chr1_3:6923185-6923204 | None:intergenic | 25.0% |
| ! | CTCCATAAATTTCAATCAAT+AGG | + | chr1_3:6923192-6923211 | None:intergenic | 25.0% |
| ! | ACATTGTTTATTTAACTAGC+TGG | - | chr1_3:6923368-6923387 | Msa0100450:intron | 25.0% |
| !!! | GGAAGTGTTAAATTATCTAA+TGG | - | chr1_3:6923389-6923408 | Msa0100450:intron | 25.0% |
| ! | AGTGTTAAATTATCTAATGG+TGG | - | chr1_3:6923392-6923411 | Msa0100450:intron | 25.0% |
| !!! | GTGCTTTGTTATTAATATGT+TGG | + | chr1_3:6923513-6923532 | None:intergenic | 25.0% |
| ! | AGGAACAATTAACAATTAAG+AGG | + | chr1_3:6923949-6923968 | None:intergenic | 25.0% |
| !! | AGGAAAAAATATTTCTGCTT+AGG | + | chr1_3:6923969-6923988 | None:intergenic | 25.0% |
| !!! | TAAGCAGAAATATTTTTTCC+TGG | - | chr1_3:6923968-6923987 | Msa0100450:intron | 25.0% |
| !!! | AAGCAGAAATATTTTTTCCT+GGG | - | chr1_3:6923969-6923988 | Msa0100450:intron | 25.0% |
| !!! | AAATATTTTTTCCTGGGTTT+TGG | - | chr1_3:6923975-6923994 | Msa0100450:intron | 25.0% |
| ! | TAATTATTAAACCAAAACCC+AGG | + | chr1_3:6923989-6924008 | None:intergenic | 25.0% |
| !! | ATACTTTAATTTAGATCGTC+TGG | + | chr1_3:6924019-6924038 | None:intergenic | 25.0% |
| !!! | TTTGTTTTACAGTGGTTTTT+AGG | - | chr1_3:6924448-6924467 | Msa0100450:intron | 25.0% |
| !!! | TTGTTTTACAGTGGTTTTTA+GGG | - | chr1_3:6924449-6924468 | Msa0100450:intron | 25.0% |
| !!! | AAAGGAAGGTATTTATGAAT+TGG | + | chr1_3:6924512-6924531 | None:intergenic | 25.0% |
| !!! | GATTTTCAAGTAAAAAAGGA+AGG | + | chr1_3:6924526-6924545 | None:intergenic | 25.0% |
| ! | ATGAAAAGTTGCTTAGTTTA+AGG | - | chr1_3:6924586-6924605 | Msa0100450:CDS | 25.0% |
| !! | TGTATGTTTGGTTTCACTTT+TGG | - | chr1_3:6917341-6917360 | Msa0100450:three_prime_UTR | 30.0% |
| !! | CAATTCTAGAATCAAATGCT+CGG | + | chr1_3:6917410-6917429 | None:intergenic | 30.0% |
| TACATTGATGTAAAAGTGAG+TGG | + | chr1_3:6917465-6917484 | None:intergenic | 30.0% | |
| ! | CACATATCCATGAGATTTTA+TGG | - | chr1_3:6917589-6917608 | Msa0100450:intron | 30.0% |
| CCTATTTCCATAAAATCTCA+TGG | + | chr1_3:6917599-6917618 | None:intergenic | 30.0% | |
| ! | CCATGAGATTTTATGGAAAT+AGG | - | chr1_3:6917596-6917615 | Msa0100450:intron | 30.0% |
| CTTCTAAGTAGTTAAACAGT+AGG | - | chr1_3:6917660-6917679 | Msa0100450:intron | 30.0% | |
| !! | GATTTTATATGCTTGGTAGT+TGG | - | chr1_3:6917828-6917847 | Msa0100450:intron | 30.0% |
| ! | TCCATCAATTTTAAATCGGA+TGG | - | chr1_3:6918274-6918293 | Msa0100450:intron | 30.0% |
| ! | ACCATCCGATTTAAAATTGA+TGG | + | chr1_3:6918278-6918297 | None:intergenic | 30.0% |
| ATAAACTATGGAAATGGAGT+CGG | + | chr1_3:6918334-6918353 | None:intergenic | 30.0% | |
| ACTCCATTTCCATAGTTTAT+GGG | - | chr1_3:6918334-6918353 | Msa0100450:intron | 30.0% | |
| TATTACACAAACACTTGTGT+AGG | + | chr1_3:6918470-6918489 | None:intergenic | 30.0% | |
| !! | GCGTTTGAAATGCTTTATTT+GGG | + | chr1_3:6918495-6918514 | None:intergenic | 30.0% |
| ATATAACTTACATGATACCG+TGG | + | chr1_3:6918595-6918614 | None:intergenic | 30.0% | |
| ! | TGGCATTTCAAGCAAATTTT+CGG | - | chr1_3:6918701-6918720 | Msa0100450:intron | 30.0% |
| ATGAAAAATGACAATGCAGT+GGG | - | chr1_3:6919008-6919027 | Msa0100450:CDS | 30.0% | |
| TGACAGTTATATGAAGGATA+GGG | + | chr1_3:6919144-6919163 | None:intergenic | 30.0% | |
| ATGACAGTTATATGAAGGAT+AGG | + | chr1_3:6919145-6919164 | None:intergenic | 30.0% | |
| ATATCATATCGATCCCTAAA+AGG | + | chr1_3:6919278-6919297 | None:intergenic | 30.0% | |
| ! | TAACTTGATGGCATTATTCA+GGG | - | chr1_3:6919310-6919329 | Msa0100450:intron | 30.0% |
| ACTTCAAAGATATGTGTCAT+CGG | + | chr1_3:6919370-6919389 | None:intergenic | 30.0% | |
| TATTCATTCAATGGCTAACT+AGG | + | chr1_3:6919556-6919575 | None:intergenic | 30.0% | |
| ! | TTACACTCTTATTGACTATC+TGG | + | chr1_3:6919591-6919610 | None:intergenic | 30.0% |
| TGTAATAAAGAAAACGGTGT+CGG | + | chr1_3:6919625-6919644 | None:intergenic | 30.0% | |
| ! | GGAGGGATTTTTGTTAATAA+GGG | - | chr1_3:6919709-6919728 | Msa0100450:intron | 30.0% |
| ! | GGATTTTTGTTAATAAGGGA+TGG | - | chr1_3:6919713-6919732 | Msa0100450:intron | 30.0% |
| TTGTAATTCCAACTTTCCAA+GGG | + | chr1_3:6919788-6919807 | None:intergenic | 30.0% | |
| TCTATATCTCTACTTGATGT+GGG | + | chr1_3:6919857-6919876 | None:intergenic | 30.0% | |
| CATCAAATTAGAATTTCGCT+AGG | + | chr1_3:6919945-6919964 | None:intergenic | 30.0% | |
| ! | GATATTTCTATGTAGGATCT+TGG | + | chr1_3:6919980-6919999 | None:intergenic | 30.0% |
| ! | ATATCAAAGTTTTTCCACCA+AGG | - | chr1_3:6919995-6920014 | Msa0100450:CDS | 30.0% |
| GAAAAAAAACTCAAGAGGTT+AGG | + | chr1_3:6920030-6920049 | None:intergenic | 30.0% | |
| !!! | TTTCCTTTTGAGATTGAGTT+AGG | - | chr1_3:6920046-6920065 | Msa0100450:CDS | 30.0% |
| TGTGCTTATAGTCATATCAT+AGG | - | chr1_3:6920235-6920254 | Msa0100450:intron | 30.0% | |
| TGTGAATTCATTGCTAATGT+AGG | - | chr1_3:6920505-6920524 | Msa0100450:intron | 30.0% | |
| GTGAATTCATTGCTAATGTA+GGG | - | chr1_3:6920506-6920525 | Msa0100450:intron | 30.0% | |
| TAAGTTAATCCAATCAGATC+AGG | + | chr1_3:6920580-6920599 | None:intergenic | 30.0% | |
| ! | TGGATTAACTTACACACTTT+TGG | - | chr1_3:6920588-6920607 | Msa0100450:intron | 30.0% |
| !!! | GCTCATTTTTTTCGTTTTCA+TGG | - | chr1_3:6920662-6920681 | Msa0100450:intron | 30.0% |
| TCATCAATTTGATGAAACTC+AGG | + | chr1_3:6920688-6920707 | None:intergenic | 30.0% | |
| GCATATAATTTCTGTTCACT+TGG | - | chr1_3:6920747-6920766 | Msa0100450:intron | 30.0% | |
| TAATTTCTGTTCACTTGGTT+TGG | - | chr1_3:6920752-6920771 | Msa0100450:intron | 30.0% | |
| ! | CATTTTGAACTATCCTTTTG+AGG | - | chr1_3:6920955-6920974 | Msa0100450:intron | 30.0% |
| GTTTGAATCTTGAGTTTAAC+TGG | - | chr1_3:6921003-6921022 | Msa0100450:intron | 30.0% | |
| ! | ATACTTTGCTAGGATTTGTT+TGG | + | chr1_3:6921036-6921055 | None:intergenic | 30.0% |
| ACTCAAAGAAATACTTTGCT+AGG | + | chr1_3:6921046-6921065 | None:intergenic | 30.0% | |
| TTATTCTTCTCTGTATTGGA+AGG | + | chr1_3:6921209-6921228 | None:intergenic | 30.0% | |
| ! | AAATCCTTAATGCCAGTTTT+TGG | - | chr1_3:6921462-6921481 | Msa0100450:intron | 30.0% |
| AAGGACTGAAAAGGAAAAAT+AGG | + | chr1_3:6921553-6921572 | None:intergenic | 30.0% | |
| ATATGACGTTTGCAATAAGT+TGG | - | chr1_3:6921713-6921732 | Msa0100450:intron | 30.0% | |
| !!! | CTGACATTTTTTCACTAAAC+AGG | - | chr1_3:6921815-6921834 | Msa0100450:intron | 30.0% |
| ! | TATTTTCTGCGTAATTGACA+CGG | + | chr1_3:6922261-6922280 | None:intergenic | 30.0% |
| TGTTTATCTCATATCAAGCA+TGG | - | chr1_3:6922298-6922317 | Msa0100450:intron | 30.0% | |
| CTGGAAAAAATGGAATTTGA+TGG | + | chr1_3:6922405-6922424 | None:intergenic | 30.0% | |
| !!! | TTCCATTTTTTCCAGTGATT+TGG | - | chr1_3:6922410-6922429 | Msa0100450:intron | 30.0% |
| !!! | TCCATTTTTTCCAGTGATTT+GGG | - | chr1_3:6922411-6922430 | Msa0100450:intron | 30.0% |
| TTCGTAATAACCAGATCAAA+AGG | - | chr1_3:6922497-6922516 | Msa0100450:intron | 30.0% | |
| TGTAGAGCAGAAAAAAGATT+TGG | + | chr1_3:6922679-6922698 | None:intergenic | 30.0% | |
| !!! | AAATCTTTTTTCTGCTCTAC+AGG | - | chr1_3:6922678-6922697 | Msa0100450:intron | 30.0% |
| !!! | GATCATTTACTTTTTCTACG+AGG | - | chr1_3:6922739-6922758 | Msa0100450:intron | 30.0% |
| AATCTTTCAGGCTGTTAAAA+TGG | - | chr1_3:6922799-6922818 | Msa0100450:intron | 30.0% | |
| !! | AACTCATTTGCTGTGTTAAA+AGG | - | chr1_3:6922857-6922876 | Msa0100450:intron | 30.0% |
| !! | CTATACAATGCCTTTTAAGT+TGG | - | chr1_3:6922895-6922914 | Msa0100450:CDS | 30.0% |
| CTGATATTCCAATTTCTCAA+AGG | - | chr1_3:6923049-6923068 | Msa0100450:intron | 30.0% | |
| !! | GTTAGAAAAAGAGTGTTAGA+TGG | + | chr1_3:6923156-6923175 | None:intergenic | 30.0% |
| ! | TTTATGGAGTCTCACTATTT+TGG | - | chr1_3:6923203-6923222 | Msa0100450:intron | 30.0% |
| ATCTTTGAGTCTCACAAATT+TGG | - | chr1_3:6923242-6923261 | Msa0100450:intron | 30.0% | |
| !! | GTTACTCTGGTTTCATTTTT+CGG | - | chr1_3:6923677-6923696 | Msa0100450:CDS | 30.0% |
| GTAATAATGACAGAATCTAC+AGG | - | chr1_3:6923785-6923804 | Msa0100450:CDS | 30.0% | |
| CAACTAAAGCAATCAAAAGA+TGG | - | chr1_3:6923829-6923848 | Msa0100450:intron | 30.0% | |
| TAAACAAGGTCTACAATGAA+TGG | - | chr1_3:6924110-6924129 | Msa0100450:intron | 30.0% | |
| ! | TCAGTTTTACTGTATTTGCA+AGG | + | chr1_3:6924406-6924425 | None:intergenic | 30.0% |
| !! | TGTTTTACAGTGGTTTTTAG+GGG | - | chr1_3:6924450-6924469 | Msa0100450:intron | 30.0% |
| ATCGATATAAGTACCTGAAA+AGG | - | chr1_3:6924543-6924562 | Msa0100450:intron | 30.0% | |
| TTCTATGCTGTTATTCTTCA+TGG | - | chr1_3:6924620-6924639 | Msa0100450:exon | 30.0% | |
| ! | AACTTCCATAGTTTGTGAAT+TGG | - | chr1_3:6924782-6924801 | Msa0100450:five_prime_UTR | 30.0% |
| !!! | TTGTTTTTTAGGTGCTTCCT+GGG | + | chr1_3:6916948-6916967 | None:intergenic | 35.0% |
| !!! | TTTGTTTTTTAGGTGCTTCC+TGG | + | chr1_3:6916949-6916968 | None:intergenic | 35.0% |
| !! | AGGAAGCACCTAAAAAACAA+AGG | - | chr1_3:6916948-6916967 | Msa0100450:three_prime_UTR | 35.0% |
| ACTTTGATCGCTGATGATTA+TGG | - | chr1_3:6917189-6917208 | Msa0100450:three_prime_UTR | 35.0% | |
| !! | ATGTTTGGTTTCACTTTTGG+AGG | - | chr1_3:6917344-6917363 | Msa0100450:three_prime_UTR | 35.0% |
| !! | TGTTTGGTTTCACTTTTGGA+GGG | - | chr1_3:6917345-6917364 | Msa0100450:three_prime_UTR | 35.0% |
| TATGTGTTTGTTTGATGCTG+CGG | + | chr1_3:6917575-6917594 | None:intergenic | 35.0% | |
| ! | GTTTGCTACATTGCACAATA+AGG | + | chr1_3:6917722-6917741 | None:intergenic | 35.0% |
| ! | GATGGTGTTTTCATATTCAC+AGG | + | chr1_3:6917869-6917888 | None:intergenic | 35.0% |
| CAGCATCCAATAAAGAATCA+AGG | + | chr1_3:6917909-6917928 | None:intergenic | 35.0% | |
| TTCTCTTTATGCTCATTGTC+CGG | + | chr1_3:6917943-6917962 | None:intergenic | 35.0% | |
| TTCATAATGTAGGAGCTGTT+TGG | - | chr1_3:6918069-6918088 | Msa0100450:CDS | 35.0% | |
| TTACACGCTGTACGTAATAT+CGG | - | chr1_3:6918197-6918216 | Msa0100450:CDS | 35.0% | |
| ACCATCTGATCTCAAATCAA+TGG | + | chr1_3:6918223-6918242 | None:intergenic | 35.0% | |
| ! | AATTTTAAATCGGATGGTCG+AGG | - | chr1_3:6918280-6918299 | Msa0100450:intron | 35.0% |
| GACTCCATTTCCATAGTTTA+TGG | - | chr1_3:6918333-6918352 | Msa0100450:intron | 35.0% | |
| ACACCCATAAACTATGGAAA+TGG | + | chr1_3:6918340-6918359 | None:intergenic | 35.0% | |
| GAGTTTACACCCATAAACTA+TGG | + | chr1_3:6918346-6918365 | None:intergenic | 35.0% | |
| ! | GGCGTTTGAAATGCTTTATT+TGG | + | chr1_3:6918496-6918515 | None:intergenic | 35.0% |
| AGAGACATGTCATTATCATC+CGG | - | chr1_3:6918550-6918569 | Msa0100450:intron | 35.0% | |
| AATTGAAAGAAGACATGCTC+CGG | + | chr1_3:6918572-6918591 | None:intergenic | 35.0% | |
| CATGTCTTCTTTCAATTCCA+CGG | - | chr1_3:6918575-6918594 | Msa0100450:intron | 35.0% | |
| ! | TTCAAGCAAATTTTCGGACA+TGG | - | chr1_3:6918707-6918726 | Msa0100450:intron | 35.0% |
| GATCAGTTCATAGCAAAATG+TGG | - | chr1_3:6918744-6918763 | Msa0100450:intron | 35.0% | |
| ! | AGAATTGAAAGCATATCCCT+TGG | + | chr1_3:6918771-6918790 | None:intergenic | 35.0% |
| TTTGTATGTTGCTGTACTTC+TGG | + | chr1_3:6918931-6918950 | None:intergenic | 35.0% | |
| GATGAAAAATGACAATGCAG+TGG | - | chr1_3:6919007-6919026 | Msa0100450:CDS | 35.0% | |
| TGAAAAATGACAATGCAGTG+GGG | - | chr1_3:6919009-6919028 | Msa0100450:CDS | 35.0% | |
| GGGAAATGACAGTTATATGA+AGG | + | chr1_3:6919150-6919169 | None:intergenic | 35.0% | |
| GAAACTGATGGGATTATGTT+AGG | + | chr1_3:6919253-6919272 | None:intergenic | 35.0% | |
| CCTAAAAGGATGAAACTGAT+GGG | + | chr1_3:6919264-6919283 | None:intergenic | 35.0% | |
| ! | CCATCAGTTTCATCCTTTTA+GGG | - | chr1_3:6919262-6919281 | Msa0100450:intron | 35.0% |
| CACTGTAAGAACTAACTTGA+TGG | - | chr1_3:6919298-6919317 | Msa0100450:intron | 35.0% | |
| ! | CTAACTTGATGGCATTATTC+AGG | - | chr1_3:6919309-6919328 | Msa0100450:intron | 35.0% |
| CTTCAAAGATATGTGTCATC+GGG | + | chr1_3:6919369-6919388 | None:intergenic | 35.0% | |
| !! | CATATCTTTGAAGTCCAAAG+TGG | - | chr1_3:6919376-6919395 | Msa0100450:CDS | 35.0% |
| ! | AAGTCCAAAGTGGACATTTT+CGG | - | chr1_3:6919386-6919405 | Msa0100450:CDS | 35.0% |
| AAATCCGAAAATGTCCACTT+TGG | + | chr1_3:6919393-6919412 | None:intergenic | 35.0% | |
| ! | GGGAGGGATTTTTGTTAATA+AGG | - | chr1_3:6919708-6919727 | Msa0100450:intron | 35.0% |
| CTTGTAATTCCAACTTTCCA+AGG | + | chr1_3:6919789-6919808 | None:intergenic | 35.0% | |
| CTTGGAAAGTTGGAATTACA+AGG | - | chr1_3:6919787-6919806 | Msa0100450:CDS | 35.0% | |
| GTCTATATCTCTACTTGATG+TGG | + | chr1_3:6919858-6919877 | None:intergenic | 35.0% | |
| TAATACATAAGCTAGCTCGA+TGG | + | chr1_3:6919916-6919935 | None:intergenic | 35.0% | |
| GACATTAGGTTACTCAAGTA+AGG | - | chr1_3:6920345-6920364 | Msa0100450:intron | 35.0% | |
| TACATTGTTCCTCCTTTATC+AGG | - | chr1_3:6920385-6920404 | Msa0100450:intron | 35.0% | |
| ACATTGTTCCTCCTTTATCA+GGG | - | chr1_3:6920386-6920405 | Msa0100450:intron | 35.0% | |
| !! | GCAGTGAACTTTTTGATTAC+TGG | - | chr1_3:6920427-6920446 | Msa0100450:intron | 35.0% |
| ! | TTTGAAACTCCTGATCTGAT+TGG | - | chr1_3:6920568-6920587 | Msa0100450:intron | 35.0% |
| CAAATAGGGGTAAAAAACGT+GGG | + | chr1_3:6920638-6920657 | None:intergenic | 35.0% | |
| AAAAATGAGCCTGGCAAATA+GGG | + | chr1_3:6920652-6920671 | None:intergenic | 35.0% | |
| AAAAAATGAGCCTGGCAAAT+AGG | + | chr1_3:6920653-6920672 | None:intergenic | 35.0% | |
| GAAAACGAAAAAAATGAGCC+TGG | + | chr1_3:6920661-6920680 | None:intergenic | 35.0% | |
| ATCATTTGCTTAGCTAGTGT+GGG | + | chr1_3:6920815-6920834 | None:intergenic | 35.0% | |
| TATCATTTGCTTAGCTAGTG+TGG | + | chr1_3:6920816-6920835 | None:intergenic | 35.0% | |
| TTGAGTAAAGTGGTATGTCA+TGG | - | chr1_3:6921060-6921079 | Msa0100450:intron | 35.0% | |
| TGAGTAAAGTGGTATGTCAT+GGG | - | chr1_3:6921061-6921080 | Msa0100450:intron | 35.0% | |
| TTGATATCAAGCTCAAGCTA+AGG | + | chr1_3:6921319-6921338 | None:intergenic | 35.0% | |
| TATGCAGCTAACAAGACTAT+CGG | + | chr1_3:6921346-6921365 | None:intergenic | 35.0% | |
| TGATTGGACAAATTCTCCAT+TGG | + | chr1_3:6921399-6921418 | None:intergenic | 35.0% | |
| ATGAAAACATCCAAGGAATG+TGG | + | chr1_3:6921525-6921544 | None:intergenic | 35.0% | |
| GGTATGAATGAAAACATCCA+AGG | + | chr1_3:6921532-6921551 | None:intergenic | 35.0% | |
| GATGGATATAAGGACTGAAA+AGG | + | chr1_3:6921562-6921581 | None:intergenic | 35.0% | |
| TTTCAGTCCTTATATCCATC+CGG | - | chr1_3:6921562-6921581 | Msa0100450:intron | 35.0% | |
| ACTAAAGTGGATGGTAACTT+GGG | + | chr1_3:6921947-6921966 | None:intergenic | 35.0% | |
| TACTAAAGTGGATGGTAACT+TGG | + | chr1_3:6921948-6921967 | None:intergenic | 35.0% | |
| TCACGAATTGCATCATATTG+TGG | - | chr1_3:6922095-6922114 | Msa0100450:intron | 35.0% | |
| AGTTACAACTTATGATGTCG+AGG | - | chr1_3:6922136-6922155 | Msa0100450:intron | 35.0% | |
| !! | AAGAGTACTACCTCCAAAAA+CGG | + | chr1_3:6922174-6922193 | None:intergenic | 35.0% |
| !! | TTTTTGGAGGTAGTACTCTT+AGG | - | chr1_3:6922174-6922193 | Msa0100450:intron | 35.0% |
| !!! | CCATTTTTTCCAGTGATTTG+GGG | - | chr1_3:6922412-6922431 | Msa0100450:intron | 35.0% |
| !!! | CATTTTTTCCAGTGATTTGG+GGG | - | chr1_3:6922413-6922432 | Msa0100450:intron | 35.0% |
| CATATCTTCTTTAGCAGCAT+GGG | + | chr1_3:6922458-6922477 | None:intergenic | 35.0% | |
| TCATATCTTCTTTAGCAGCA+TGG | + | chr1_3:6922459-6922478 | None:intergenic | 35.0% | |
| TGCTAAAGAAGATATGACTG+TGG | - | chr1_3:6922462-6922481 | Msa0100450:intron | 35.0% | |
| GTAATAACCAGATCAAAAGG+TGG | - | chr1_3:6922500-6922519 | Msa0100450:intron | 35.0% | |
| TTCTTACTTTGCATCACAGA+TGG | - | chr1_3:6922601-6922620 | Msa0100450:intron | 35.0% | |
| !!! | TTTTTTCTATGTTCTGGGTC+TGG | + | chr1_3:6922839-6922858 | None:intergenic | 35.0% |
| TGTGTGTTCATGTTACTCAA+AGG | - | chr1_3:6923020-6923039 | Msa0100450:intron | 35.0% | |
| ! | ATGTCAAGCCTTTGAGAAAT+TGG | + | chr1_3:6923060-6923079 | None:intergenic | 35.0% |
| !!! | CCATTTTGGTTGATCTTGTT+CGG | - | chr1_3:6923437-6923456 | Msa0100450:intron | 35.0% |
| ! | TTTTACTACTGACGTACTAC+TGG | + | chr1_3:6923485-6923504 | None:intergenic | 35.0% |
| CACATCCAGATATATCATTC+TGG | - | chr1_3:6923530-6923549 | Msa0100450:intron | 35.0% | |
| !!! | CACTGTTTTGAAAAGTCTGT+AGG | - | chr1_3:6923705-6923724 | Msa0100450:CDS | 35.0% |
| ATGGTGAAAACTACATTTCG+AGG | - | chr1_3:6923848-6923867 | Msa0100450:intron | 35.0% | |
| TGGTGAAAACTACATTTCGA+GGG | - | chr1_3:6923849-6923868 | Msa0100450:intron | 35.0% | |
| TCTCAATTACGCTTTGTAAC+AGG | - | chr1_3:6924049-6924068 | Msa0100450:intron | 35.0% | |
| TACACTAGTGACAGGTATAA+TGG | - | chr1_3:6924147-6924166 | Msa0100450:intron | 35.0% | |
| !!! | AGTTGTGCTTTGTTTTACAG+TGG | - | chr1_3:6924440-6924459 | Msa0100450:intron | 35.0% |
| AAGTTCACCAAAAGCTTGTA+TGG | - | chr1_3:6924674-6924693 | Msa0100450:five_prime_UTR | 35.0% | |
| CCATTCCAATTCACAAACTA+TGG | + | chr1_3:6924790-6924809 | None:intergenic | 35.0% | |
| ! | CCATAGTTTGTGAATTGGAA+TGG | - | chr1_3:6924787-6924806 | Msa0100450:five_prime_UTR | 35.0% |
| AGTGAATTTATCCAACTTGC+AGG | - | chr1_3:6924831-6924850 | Msa0100450:five_prime_UTR | 35.0% | |
| GTGAATTTATCCAACTTGCA+GGG | - | chr1_3:6924832-6924851 | Msa0100450:five_prime_UTR | 35.0% | |
| TGAATTTATCCAACTTGCAG+GGG | - | chr1_3:6924833-6924852 | Msa0100450:five_prime_UTR | 35.0% | |
| ! | TTCGGTTTGATTGGGGATTA+GGG | + | chr1_3:6916787-6916806 | None:intergenic | 40.0% |
| ! | ATTCGGTTTGATTGGGGATT+AGG | + | chr1_3:6916788-6916807 | None:intergenic | 40.0% |
| AATCCCCAATCAAACCGAAT+AGG | - | chr1_3:6916788-6916807 | Msa0100450:three_prime_UTR | 40.0% | |
| ATCCCCAATCAAACCGAATA+GGG | - | chr1_3:6916789-6916808 | Msa0100450:three_prime_UTR | 40.0% | |
| ! | AACCCCTATTCGGTTTGATT+GGG | + | chr1_3:6916795-6916814 | None:intergenic | 40.0% |
| ! | TAACCCCTATTCGGTTTGAT+TGG | + | chr1_3:6916796-6916815 | None:intergenic | 40.0% |
| TCTGTTTCCTTTATTCCTGC+TGG | + | chr1_3:6916852-6916871 | None:intergenic | 40.0% | |
| AGCACCTAAAAAACAAAGGC+TGG | - | chr1_3:6916952-6916971 | Msa0100450:three_prime_UTR | 40.0% | |
| GTTTCAGAATGAATGCATCG+CGG | + | chr1_3:6916990-6917009 | None:intergenic | 40.0% | |
| !! | TTTCATGTCGATTTCCGTAG+AGG | - | chr1_3:6917016-6917035 | Msa0100450:three_prime_UTR | 40.0% |
| !! | TTCATGTCGATTTCCGTAGA+GGG | - | chr1_3:6917017-6917036 | Msa0100450:three_prime_UTR | 40.0% |
| !! | TTGGTACTTTAGGGCATGAT+TGG | + | chr1_3:6917097-6917116 | None:intergenic | 40.0% |
| ! | CTGATGATTATGGCTCTGTT+TGG | - | chr1_3:6917199-6917218 | Msa0100450:three_prime_UTR | 40.0% |
| !! | ACCTTCAACTCACTTTTAGC+CGG | - | chr1_3:6917505-6917524 | Msa0100450:CDS | 40.0% |
| !! | GAAATTGACAAGCTCTGAGA+TGG | + | chr1_3:6917887-6917906 | None:intergenic | 40.0% |
| ! | CAATGCATTTGAAGCTCTGT+CGG | - | chr1_3:6917963-6917982 | Msa0100450:intron | 40.0% |
| !! | GCCATTGATTTGAGATCAGA+TGG | - | chr1_3:6918219-6918238 | Msa0100450:intron | 40.0% |
| !! | TCTTTCCTTTGAAGTGCCAA+AGG | - | chr1_3:6918662-6918681 | Msa0100450:intron | 40.0% |
| !! | GCAAACTTTGAAACAGCCTT+TGG | + | chr1_3:6918681-6918700 | None:intergenic | 40.0% |
| ! | AAGGCTGTTTCAAAGTTTGC+TGG | - | chr1_3:6918681-6918700 | Msa0100450:intron | 40.0% |
| TCATAGCAAAATGTGGTCCA+AGG | - | chr1_3:6918751-6918770 | Msa0100450:intron | 40.0% | |
| CATAGCAAAATGTGGTCCAA+GGG | - | chr1_3:6918752-6918771 | Msa0100450:intron | 40.0% | |
| AGAGAAAGTCCTTTCTCTGA+AGG | + | chr1_3:6919068-6919087 | None:intergenic | 40.0% | |
| CAGTTACGACCTAAAGGTTT+GGG | + | chr1_3:6919092-6919111 | None:intergenic | 40.0% | |
| TCAGTTACGACCTAAAGGTT+TGG | + | chr1_3:6919093-6919112 | None:intergenic | 40.0% | |
| ACTGTTCAGTTACGACCTAA+AGG | + | chr1_3:6919098-6919117 | None:intergenic | 40.0% | |
| AAGGATAGGGATAGCAATAG+AGG | + | chr1_3:6919131-6919150 | None:intergenic | 40.0% | |
| !! | GATGTGGCTAGTTTGTTAGA+GGG | + | chr1_3:6919170-6919189 | None:intergenic | 40.0% |
| !! | TGATGTGGCTAGTTTGTTAG+AGG | + | chr1_3:6919171-6919190 | None:intergenic | 40.0% |
| CCAACTAGTGAACTAAACAG+GGG | + | chr1_3:6919210-6919229 | None:intergenic | 40.0% | |
| CCCAACTAGTGAACTAAACA+GGG | + | chr1_3:6919211-6919230 | None:intergenic | 40.0% | |
| ! | CCCTGTTTAGTTCACTAGTT+GGG | - | chr1_3:6919208-6919227 | Msa0100450:CDS | 40.0% |
| TTAGTTCACTAGTTGGGCTT+AGG | - | chr1_3:6919214-6919233 | Msa0100450:CDS | 40.0% | |
| ! | CCCATCAGTTTCATCCTTTT+AGG | - | chr1_3:6919261-6919280 | Msa0100450:intron | 40.0% |
| CCCTAAAAGGATGAAACTGA+TGG | + | chr1_3:6919265-6919284 | None:intergenic | 40.0% | |
| TATCTGTTTGCATGCTGCAT+AGG | - | chr1_3:6919447-6919466 | Msa0100450:intron | 40.0% | |
| AATGGCTAACTAGGCACATA+AGG | + | chr1_3:6919547-6919566 | None:intergenic | 40.0% | |
| ! | AATAAAGAAAACGGTGTCGG+TGG | + | chr1_3:6919622-6919641 | None:intergenic | 40.0% |
| TGCTATAGATCTCAAGCCAA+GGG | + | chr1_3:6919650-6919669 | None:intergenic | 40.0% | |
| TTGCTATAGATCTCAAGCCA+AGG | + | chr1_3:6919651-6919670 | None:intergenic | 40.0% | |
| TTTGTTAATAAGGGATGGGG+AGG | - | chr1_3:6919718-6919737 | Msa0100450:intron | 40.0% | |
| TGCCATACAAACTATCTCTG+AGG | - | chr1_3:6919747-6919766 | Msa0100450:intron | 40.0% | |
| GCCATACAAACTATCTCTGA+GGG | - | chr1_3:6919748-6919767 | Msa0100450:intron | 40.0% | |
| CCATACAAACTATCTCTGAG+GGG | - | chr1_3:6919749-6919768 | Msa0100450:intron | 40.0% | |
| ! | GGGATTTAATTTCAGTCCCT+TGG | - | chr1_3:6919769-6919788 | Msa0100450:CDS | 40.0% |
| ATTTCAGTCCCTTGGAAAGT+TGG | - | chr1_3:6919777-6919796 | Msa0100450:CDS | 40.0% | |
| GTTGGAATTACAAGGCTAAG+CGG | - | chr1_3:6919795-6919814 | Msa0100450:CDS | 40.0% | |
| TAAGCTAGCTCGATGGATAA+AGG | + | chr1_3:6919909-6919928 | None:intergenic | 40.0% | |
| TTCTATGTAGGATCTTGGGA+TGG | + | chr1_3:6919975-6919994 | None:intergenic | 40.0% | |
| ! | AAAGTTTTTCCACCAAGGCA+TGG | - | chr1_3:6920000-6920019 | Msa0100450:CDS | 40.0% |
| AGGCCTAACTCAATCTCAAA+AGG | + | chr1_3:6920052-6920071 | None:intergenic | 40.0% | |
| GTCATGTCAAGGTTATGTGA+TGG | + | chr1_3:6920113-6920132 | None:intergenic | 40.0% | |
| TTGCTAATGTAGGGCTTGAA+AGG | - | chr1_3:6920515-6920534 | Msa0100450:intron | 40.0% | |
| GCAAATAGGGGTAAAAAACG+TGG | + | chr1_3:6920639-6920658 | None:intergenic | 40.0% | |
| !!! | GTTTTTTACCCCTATTTGCC+AGG | - | chr1_3:6920640-6920659 | Msa0100450:intron | 40.0% |
| AAAATGAGCCTGGCAAATAG+GGG | + | chr1_3:6920651-6920670 | None:intergenic | 40.0% | |
| CCAAAACACTTCTCCTCAAA+AGG | + | chr1_3:6920971-6920990 | None:intergenic | 40.0% | |
| !!! | CCTTTTGAGGAGAAGTGTTT+TGG | - | chr1_3:6920968-6920987 | Msa0100450:intron | 40.0% |
| !!! | TGAGGAGAAGTGTTTTGGAT+TGG | - | chr1_3:6920973-6920992 | Msa0100450:intron | 40.0% |
| TCGACCAAAAACTGGCATTA+AGG | + | chr1_3:6921469-6921488 | None:intergenic | 40.0% | |
| TGATTTGATGCCACATTCCT+TGG | - | chr1_3:6921512-6921531 | Msa0100450:intron | 40.0% | |
| ! | TGACGTTTGCAATAAGTTGG+TGG | - | chr1_3:6921716-6921735 | Msa0100450:intron | 40.0% |
| CATATAGACCAAGGAGAGAT+CGG | + | chr1_3:6921866-6921885 | None:intergenic | 40.0% | |
| ! | TATGTTGCCATGCACTTTTC+AGG | - | chr1_3:6922010-6922029 | Msa0100450:intron | 40.0% |
| AACTTATGATGTCGAGGTTG+TGG | - | chr1_3:6922142-6922161 | Msa0100450:intron | 40.0% | |
| CCCCAAATCACTGGAAAAAA+TGG | + | chr1_3:6922415-6922434 | None:intergenic | 40.0% | |
| AGAAGATATGACTGTGGTCA+AGG | - | chr1_3:6922468-6922487 | Msa0100450:intron | 40.0% | |
| ATCAAAAGGTGGCAAGCAAT+AGG | - | chr1_3:6922511-6922530 | Msa0100450:intron | 40.0% | |
| ATGAGAAGCAAACTGAAGTC+AGG | + | chr1_3:6922714-6922733 | None:intergenic | 40.0% | |
| AATTACCATGGAGGAAGAGT+CGG | + | chr1_3:6923106-6923125 | None:intergenic | 40.0% | |
| CAAGAAGAGAATTACCATGG+AGG | + | chr1_3:6923115-6923134 | None:intergenic | 40.0% | |
| CCTCAAGAAGAGAATTACCA+TGG | + | chr1_3:6923118-6923137 | None:intergenic | 40.0% | |
| CCATGGTAATTCTCTTCTTG+AGG | - | chr1_3:6923115-6923134 | Msa0100450:intron | 40.0% | |
| !! | CTCTCTGTAGATTGCCATTT+TGG | - | chr1_3:6923423-6923442 | Msa0100450:intron | 40.0% |
| CCGAACAAGATCAACCAAAA+TGG | + | chr1_3:6923440-6923459 | None:intergenic | 40.0% | |
| !! | TTTTGGTTGATCTTGTTCGG+AGG | - | chr1_3:6923440-6923459 | Msa0100450:intron | 40.0% |
| TTTGGTTGATCTTGTTCGGA+GGG | - | chr1_3:6923441-6923460 | Msa0100450:intron | 40.0% | |
| TGACGTACTACTGGAGATTT+CGG | + | chr1_3:6923476-6923495 | None:intergenic | 40.0% | |
| GGAGTCCAGAATGATATATC+TGG | + | chr1_3:6923538-6923557 | None:intergenic | 40.0% | |
| !! | TCAATTCTAAGACCTCCACA+GGG | - | chr1_3:6923580-6923599 | Msa0100450:intron | 40.0% |
| !! | AAAAGCACTATGCGTTACTC+TGG | - | chr1_3:6923664-6923683 | Msa0100450:CDS | 40.0% |
| ACAGGAAAGACAAACTACAC+TGG | - | chr1_3:6924067-6924086 | Msa0100450:intron | 40.0% | |
| GTCGAGGAGTAGTTTAAACA+AGG | - | chr1_3:6924096-6924115 | Msa0100450:intron | 40.0% | |
| ! | AAGGGTGCATAGAGTATCAA+TGG | + | chr1_3:6924203-6924222 | None:intergenic | 40.0% |
| AGTCACATAACCTGTCTTCT+TGG | - | chr1_3:6924282-6924301 | Msa0100450:intron | 40.0% | |
| GTGAACTTGCAAACTCGATT+GGG | + | chr1_3:6924662-6924681 | None:intergenic | 40.0% | |
| ! | CTGAAGACCATACAAGCTTT+TGG | + | chr1_3:6924684-6924703 | None:intergenic | 40.0% |
| GTGAAAAGCTTAGCAAACTG+TGG | + | chr1_3:6924719-6924738 | None:intergenic | 40.0% | |
| ACAACATTTCGGGACAACAA+GGG | + | chr1_3:6924743-6924762 | None:intergenic | 40.0% | |
| ATGTCCTTGGGACAACATTT+CGG | + | chr1_3:6924754-6924773 | None:intergenic | 40.0% | |
| AGTTACGACTCTATGTCCTT+GGG | + | chr1_3:6924766-6924785 | None:intergenic | 40.0% | |
| AAGTTACGACTCTATGTCCT+TGG | + | chr1_3:6924767-6924786 | None:intergenic | 40.0% | |
| TCCCCAATCAAACCGAATAG+GGG | - | chr1_3:6916790-6916809 | Msa0100450:three_prime_UTR | 45.0% | |
| ! | ACCCCTATTCGGTTTGATTG+GGG | + | chr1_3:6916794-6916813 | None:intergenic | 45.0% |
| TTGTTGAGCTGATGTTCCTC+TGG | + | chr1_3:6916887-6916906 | None:intergenic | 45.0% | |
| GCAGGAACCGAAAACATAAC+AGG | - | chr1_3:6916922-6916941 | Msa0100450:three_prime_UTR | 45.0% | |
| ! | TCCTGGGCCTGTTATGTTTT+CGG | + | chr1_3:6916932-6916951 | None:intergenic | 45.0% |
| !!! | GGCTCCAGCCTTTGTTTTTT+AGG | + | chr1_3:6916959-6916978 | None:intergenic | 45.0% |
| ATGAATGCATCGCGGTTTGT+GGG | + | chr1_3:6916982-6917001 | None:intergenic | 45.0% | |
| AATGAATGCATCGCGGTTTG+TGG | + | chr1_3:6916983-6917002 | None:intergenic | 45.0% | |
| TGAGCTTCAGAACCCAGAAA+CGG | + | chr1_3:6917053-6917072 | None:intergenic | 45.0% | |
| ! | TCCGGCTAAAAGTGAGTTGA+AGG | + | chr1_3:6917509-6917528 | None:intergenic | 45.0% |
| ! | GCTTGGTAGTTGGAAGAAGT+TGG | - | chr1_3:6917838-6917857 | Msa0100450:intron | 45.0% |
| CAGAAACTAGTTAACTCGCC+TGG | + | chr1_3:6918023-6918042 | None:intergenic | 45.0% | |
| GCATGGTTTCTCAACTGCAA+TGG | + | chr1_3:6918175-6918194 | None:intergenic | 45.0% | |
| AACAGCCTTTGGCACTTCAA+AGG | + | chr1_3:6918670-6918689 | None:intergenic | 45.0% | |
| CTTTCTCTGCCCAAACCTTT+AGG | - | chr1_3:6919080-6919099 | Msa0100450:intron | 45.0% | |
| GATAGGGATAGCAATAGAGG+AGG | + | chr1_3:6919128-6919147 | None:intergenic | 45.0% | |
| ! | GTGGGTTACATTTGCTGATG+TGG | + | chr1_3:6919186-6919205 | None:intergenic | 45.0% |
| AGTGAACTAAACAGGGGAGT+GGG | + | chr1_3:6919204-6919223 | None:intergenic | 45.0% | |
| TAGTGAACTAAACAGGGGAG+TGG | + | chr1_3:6919205-6919224 | None:intergenic | 45.0% | |
| ! | CCCCTGTTTAGTTCACTAGT+TGG | - | chr1_3:6919207-6919226 | Msa0100450:CDS | 45.0% |
| GCCCAACTAGTGAACTAAAC+AGG | + | chr1_3:6919212-6919231 | None:intergenic | 45.0% | |
| CGGATTTAACTATGTGCTGC+TGG | - | chr1_3:6919406-6919425 | Msa0100450:CDS | 45.0% | |
| AAAAACAAACAGGAGGGAGC+AGG | - | chr1_3:6919686-6919705 | Msa0100450:intron | 45.0% | |
| AAAACAAACAGGAGGGAGCA+GGG | - | chr1_3:6919687-6919706 | Msa0100450:intron | 45.0% | |
| ! | CCCCTCAGAGATAGTTTGTA+TGG | + | chr1_3:6919752-6919771 | None:intergenic | 45.0% |
| TGGGATCACAATAGACACCA+GGG | + | chr1_3:6919838-6919857 | None:intergenic | 45.0% | |
| TTAGGATAACCATGCCTTGG+TGG | + | chr1_3:6920012-6920031 | None:intergenic | 45.0% | |
| AGGTTAGGATAACCATGCCT+TGG | + | chr1_3:6920015-6920034 | None:intergenic | 45.0% | |
| ! | GGTGAATAGGTGTCATGTCA+AGG | + | chr1_3:6920124-6920143 | None:intergenic | 45.0% |
| AACAATGTAACTCGCAGCGT+TGG | + | chr1_3:6920374-6920393 | None:intergenic | 45.0% | |
| TTTGAGAGCCCTGATAAAGG+AGG | + | chr1_3:6920397-6920416 | None:intergenic | 45.0% | |
| TCCTTTATCAGGGCTCTCAA+AGG | - | chr1_3:6920396-6920415 | Msa0100450:intron | 45.0% | |
| CCTTTATCAGGGCTCTCAAA+GGG | - | chr1_3:6920397-6920416 | Msa0100450:intron | 45.0% | |
| ! | TTGTTTGGGGTTGTCTCCAA+TGG | - | chr1_3:6921380-6921399 | Msa0100450:intron | 45.0% |
| ACAGATGCTCGACCAAAAAC+TGG | + | chr1_3:6921477-6921496 | None:intergenic | 45.0% | |
| ! | AACAGGATGATGATGCTGCA+AGG | - | chr1_3:6921832-6921851 | Msa0100450:intron | 45.0% |
| ! | ACAGGATGATGATGCTGCAA+GGG | - | chr1_3:6921833-6921852 | Msa0100450:intron | 45.0% |
| ACTGCAGGACATATAGACCA+AGG | + | chr1_3:6921875-6921894 | None:intergenic | 45.0% | |
| TCTATATGTCCTGCAGTGCT+TGG | - | chr1_3:6921878-6921897 | Msa0100450:intron | 45.0% | |
| AAGTGGATGGTAACTTGGGA+AGG | + | chr1_3:6921943-6921962 | None:intergenic | 45.0% | |
| ! | ACAAGAGCCTGAAAAGTGCA+TGG | + | chr1_3:6922020-6922039 | None:intergenic | 45.0% |
| ! | TTGCTTGCCACCTTTTGATC+TGG | + | chr1_3:6922510-6922529 | None:intergenic | 45.0% |
| TTTCCTTTGTAAGTCTGCCG+TGG | - | chr1_3:6922551-6922570 | Msa0100450:intron | 45.0% | |
| TTCCTTTGTAAGTCTGCCGT+GGG | - | chr1_3:6922552-6922571 | Msa0100450:intron | 45.0% | |
| GCATGTTTCCTTAACTCCCA+CGG | + | chr1_3:6922571-6922590 | None:intergenic | 45.0% | |
| GTTCATCATCGCAGTTTCCA+CGG | + | chr1_3:6922633-6922652 | None:intergenic | 45.0% | |
| TGGCATATAAGACGACCACT+GGG | + | chr1_3:6922659-6922678 | None:intergenic | 45.0% | |
| TTGGCATATAAGACGACCAC+TGG | + | chr1_3:6922660-6922679 | None:intergenic | 45.0% | |
| !! | AAATACCGACTCTTCCTCCA+TGG | - | chr1_3:6923098-6923117 | Msa0100450:intron | 45.0% |
| ! | GAATTGACTCCACCAACTCA+AGG | + | chr1_3:6923567-6923586 | None:intergenic | 45.0% |
| !! | GTCAATTCTAAGACCTCCAC+AGG | - | chr1_3:6923579-6923598 | Msa0100450:intron | 45.0% |
| GCATTCTGTTTACAACCTGC+AGG | - | chr1_3:6923733-6923752 | Msa0100450:CDS | 45.0% | |
| !! | CACCAACTCGAGTGGATTAA+GGG | + | chr1_3:6924221-6924240 | None:intergenic | 45.0% |
| !! | ACACCAACTCGAGTGGATTA+AGG | + | chr1_3:6924222-6924241 | None:intergenic | 45.0% |
| !! | CACTCGAGTTGGTGTTGTAT+CGG | - | chr1_3:6924227-6924246 | Msa0100450:intron | 45.0% |
| GATACTTTGGCCAAGAAGAC+AGG | + | chr1_3:6924295-6924314 | None:intergenic | 45.0% | |
| ! | CCACACTCAATAGCCTTTTC+AGG | + | chr1_3:6924559-6924578 | None:intergenic | 45.0% |
| CCTGAAAAGGCTATTGAGTG+TGG | - | chr1_3:6924556-6924575 | Msa0100450:CDS | 45.0% | |
| CTTGCAAACTCGATTGGGAT+AGG | + | chr1_3:6924657-6924676 | None:intergenic | 45.0% | |
| GGTGAACTTGCAAACTCGAT+TGG | + | chr1_3:6924663-6924682 | None:intergenic | 45.0% | |
| CTTAGCAAACTGTGGCATGT+TGG | + | chr1_3:6924711-6924730 | None:intergenic | 45.0% | |
| GACAACATTTCGGGACAACA+AGG | + | chr1_3:6924744-6924763 | None:intergenic | 45.0% | |
| TGTCCTTGGGACAACATTTC+GGG | + | chr1_3:6924753-6924772 | None:intergenic | 45.0% | |
| ! | TATCCAACTTGCAGGGGTAT+TGG | - | chr1_3:6924839-6924858 | Msa0100450:five_prime_UTR | 45.0% |
| !! | ATCCAACTTGCAGGGGTATT+GGG | - | chr1_3:6924840-6924859 | Msa0100450:five_prime_UTR | 45.0% |
| !! | TATAAATATTCATATTAATA+TGG | - | chr1_3:6920711-6920730 | Msa0100450:intron | 5.0% |
| !!! | TTTTTGTTATTATTATTATT+TGG | + | chr1_3:6921271-6921290 | None:intergenic | 5.0% |
| !!! | TATTTTATTTTTTAAGTTAA+TGG | - | chr1_3:6923922-6923941 | Msa0100450:intron | 5.0% |
| !!! | ATTTTATTTTTTAAGTTAAT+GGG | - | chr1_3:6923923-6923942 | Msa0100450:intron | 5.0% |
| CTGGCTGCTTAACCCCTATT+CGG | + | chr1_3:6916805-6916824 | None:intergenic | 50.0% | |
| TTGAGCTGATGTTCCTCTGG+TGG | + | chr1_3:6916884-6916903 | None:intergenic | 50.0% | |
| CAATCCGCAAAAACAGCTGC+AGG | - | chr1_3:6916904-6916923 | Msa0100450:three_prime_UTR | 50.0% | |
| !!! | GGTTCCTGCAGCTGTTTTTG+CGG | + | chr1_3:6916911-6916930 | None:intergenic | 50.0% |
| ACCGAAAACATAACAGGCCC+AGG | - | chr1_3:6916928-6916947 | Msa0100450:three_prime_UTR | 50.0% | |
| TGAATGCATCGCGGTTTGTG+GGG | + | chr1_3:6916981-6917000 | None:intergenic | 50.0% | |
| GGATGCTGCTCTTTCTGATC+CGG | - | chr1_3:6917921-6917940 | Msa0100450:intron | 50.0% | |
| TTGTTCTCCGTCTCTTGACC+AGG | - | chr1_3:6918002-6918021 | Msa0100450:intron | 50.0% | |
| TAACTCGCCTGGTCAAGAGA+CGG | + | chr1_3:6918012-6918031 | None:intergenic | 50.0% | |
| ACGTACAGCGTGTAACTGCA+TGG | + | chr1_3:6918192-6918211 | None:intergenic | 50.0% | |
| TAAATCGGATGGTCGAGGTG+AGG | - | chr1_3:6918285-6918304 | Msa0100450:intron | 50.0% | |
| CAGTGCTCTGTGGGTAGTTA+GGG | + | chr1_3:6919043-6919062 | None:intergenic | 50.0% | |
| AGCACTGCTCCTTCAGAGAA+AGG | - | chr1_3:6919056-6919075 | Msa0100450:CDS | 50.0% | |
| AAACAAACAGGAGGGAGCAG+GGG | - | chr1_3:6919688-6919707 | Msa0100450:intron | 50.0% | |
| GTGGGATCACAATAGACACC+AGG | + | chr1_3:6919839-6919858 | None:intergenic | 50.0% | |
| ! | CCCTTTGAGAGCCCTGATAA+AGG | + | chr1_3:6920400-6920419 | None:intergenic | 50.0% |
| CAGTCCTTATATCCATCCGG+AGG | - | chr1_3:6921565-6921584 | Msa0100450:intron | 50.0% | |
| GAGAAGTTCCGATCTCTCCT+TGG | - | chr1_3:6921855-6921874 | Msa0100450:intron | 50.0% | |
| ! | GAGCAATTACCAAGCACTGC+AGG | + | chr1_3:6921890-6921909 | None:intergenic | 50.0% |
| ! | GTTGTGGCTAGCACCGTTTT+TGG | - | chr1_3:6922158-6922177 | Msa0100450:intron | 50.0% |
| AAGCATGGTTGCGCTCTTTC+AGG | - | chr1_3:6922313-6922332 | Msa0100450:intron | 50.0% | |
| ! | CGCTCTTTCAGGTCTGTGAT+AGG | - | chr1_3:6922324-6922343 | Msa0100450:intron | 50.0% |
| TAAGTCTGCCGTGGGAGTTA+AGG | - | chr1_3:6922560-6922579 | Msa0100450:intron | 50.0% | |
| ATCACAGATGGCGATATCCG+TGG | - | chr1_3:6922613-6922632 | Msa0100450:intron | 50.0% | |
| !! | ATTCTAAGACCTCCACAGGG+AGG | - | chr1_3:6923583-6923602 | Msa0100450:intron | 50.0% |
| AATACCGCATCACTCTGCTC+TGG | + | chr1_3:6923622-6923641 | None:intergenic | 50.0% | |
| ! | ACTACACTGGAGTCTTGTCG+AGG | - | chr1_3:6924080-6924099 | Msa0100450:intron | 50.0% |
| CCTGTCACTAGTGTACGCAA+AGG | + | chr1_3:6924142-6924161 | None:intergenic | 50.0% | |
| CCTTTGCGTACACTAGTGAC+AGG | - | chr1_3:6924139-6924158 | Msa0100450:intron | 50.0% | |
| CACCCTTAATCCACTCGAGT+TGG | - | chr1_3:6924216-6924235 | Msa0100450:intron | 50.0% | |
| CGATACAACACCAACTCGAG+TGG | + | chr1_3:6924229-6924248 | None:intergenic | 50.0% | |
| TGTCCCGAAATGTTGTCCCA+AGG | - | chr1_3:6924747-6924766 | Msa0100450:five_prime_UTR | 50.0% | |
| !! | TCCAACTTGCAGGGGTATTG+GGG | - | chr1_3:6924841-6924860 | Msa0100450:five_prime_UTR | 50.0% |
| AGCAGCACAAAGCACACCAG+CGG | - | chr1_3:6916823-6916842 | Msa0100450:three_prime_UTR | 55.0% | |
| TTATTCCTGCTGGAAGCCGC+TGG | + | chr1_3:6916842-6916861 | None:intergenic | 55.0% | |
| GCGGCTTCCAGCAGGAATAA+AGG | - | chr1_3:6916842-6916861 | Msa0100450:three_prime_UTR | 55.0% | |
| GATGTTCCTCTGGTGGTCTC+TGG | + | chr1_3:6916877-6916896 | None:intergenic | 55.0% | |
| GAATGCATCGCGGTTTGTGG+GGG | + | chr1_3:6916980-6916999 | None:intergenic | 55.0% | |
| GCAGTGCTCTGTGGGTAGTT+AGG | + | chr1_3:6919044-6919063 | None:intergenic | 55.0% | |
| CTGAAGGAGCAGTGCTCTGT+GGG | + | chr1_3:6919052-6919071 | None:intergenic | 55.0% | |
| TCTGAAGGAGCAGTGCTCTG+TGG | + | chr1_3:6919053-6919072 | None:intergenic | 55.0% | |
| GACGCCTCCGGATGGATATA+AGG | + | chr1_3:6921572-6921591 | None:intergenic | 55.0% | |
| CTTGCTGAAACTGACGCCTC+CGG | + | chr1_3:6921584-6921603 | None:intergenic | 55.0% | |
| !! | GTGGCTAGCACCGTTTTTGG+AGG | - | chr1_3:6922161-6922180 | Msa0100450:intron | 55.0% |
| GAGACATGCCCCCAAATCAC+TGG | + | chr1_3:6922424-6922443 | None:intergenic | 55.0% | |
| ! | GATTTGGGGGCATGTCTCAG+AGG | - | chr1_3:6922426-6922445 | Msa0100450:intron | 55.0% |
| CTCCCACGGCAGACTTACAA+AGG | + | chr1_3:6922557-6922576 | None:intergenic | 55.0% | |
| GCGATGATGAACAGTCCCAG+TGG | - | chr1_3:6922641-6922660 | Msa0100450:intron | 55.0% | |
| TCCACCAACTCAAGGACGCT+GGG | + | chr1_3:6923559-6923578 | None:intergenic | 55.0% | |
| TCACTCTGCTCTGGTAGGGA+AGG | + | chr1_3:6923613-6923632 | None:intergenic | 55.0% | |
| CGCATCACTCTGCTCTGGTA+GGG | + | chr1_3:6923617-6923636 | None:intergenic | 55.0% | |
| CCTACCAGAGCAGAGTGATG+CGG | - | chr1_3:6923615-6923634 | Msa0100450:intron | 55.0% | |
| TCCCCAATACCCCTGCAAGT+TGG | + | chr1_3:6924845-6924864 | None:intergenic | 55.0% | |
| GCTGGTGTGCTTTGTGCTGC+TGG | + | chr1_3:6916824-6916843 | None:intergenic | 60.0% | |
| CAGACACCAGAGACCACCAG+AGG | - | chr1_3:6916868-6916887 | Msa0100450:three_prime_UTR | 60.0% | |
| GGCGAAGCAGCTCCGTTTCT+GGG | - | chr1_3:6917038-6917057 | Msa0100450:three_prime_UTR | 60.0% | |
| AAACAGGAGGGAGCAGGGGA+GGG | - | chr1_3:6919692-6919711 | Msa0100450:intron | 60.0% | |
| TCACCACTGCACTAACGCCC+TGG | - | chr1_3:6919818-6919837 | Msa0100450:intron | 60.0% | |
| ! | ACACCAGGGCGTTAGTGCAG+TGG | + | chr1_3:6919824-6919843 | None:intergenic | 60.0% |
| CTGAAACTGACGCCTCCGGA+TGG | + | chr1_3:6921580-6921599 | None:intergenic | 60.0% | |
| GACTCCCAGCGTCCTTGAGT+TGG | - | chr1_3:6923552-6923571 | Msa0100450:intron | 60.0% | |
| !! | TCCCAGCGTCCTTGAGTTGG+TGG | - | chr1_3:6923555-6923574 | Msa0100450:intron | 60.0% |
| CTCCACCAACTCAAGGACGC+TGG | + | chr1_3:6923560-6923579 | None:intergenic | 60.0% | |
| CTCTGCTCTGGTAGGGAAGG+AGG | + | chr1_3:6923610-6923629 | None:intergenic | 60.0% | |
| CCGCATCACTCTGCTCTGGT+AGG | + | chr1_3:6923618-6923637 | None:intergenic | 60.0% | |
| TGAGAGCTGACAGCACCTGC+AGG | + | chr1_3:6923751-6923770 | None:intergenic | 60.0% | |
| CGGAGCTGCTTCGCCCTCTA+CGG | + | chr1_3:6917033-6917052 | None:intergenic | 65.0% | |
| GGGCGAAGCAGCTCCGTTTC+TGG | - | chr1_3:6917037-6917056 | Msa0100450:three_prime_UTR | 65.0% | |
| CAAACAGGAGGGAGCAGGGG+AGG | - | chr1_3:6919691-6919710 | Msa0100450:intron | 65.0% | |
| GAAGGAGGTCCTCCCTGTGG+AGG | + | chr1_3:6923595-6923614 | None:intergenic | 65.0% | |
| AGGGAAGGAGGTCCTCCCTG+TGG | + | chr1_3:6923598-6923617 | None:intergenic | 65.0% | |
| GCACACCAGCGGCTTCCAGC+AGG | - | chr1_3:6916834-6916853 | Msa0100450:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 6916778 | 6924879 | 6916778 | ID=Msa0100450;Name=Msa0100450 |
| chr1_3 | mRNA | 6916778 | 6924879 | 6916778 | ID=Msa0100450-mRNA-1;Parent=Msa0100450;Name=Msa0100450-mRNA-1;_AED=0.12;_eAED=0.12;_QI=242|0.5|0.6|0.93|1|1|15|588|595 |
| chr1_3 | exon | 6916778 | 6917586 | 6916778 | ID=Msa0100450-mRNA-1:exon:2662;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6917737 | 6917742 | 6917737 | ID=Msa0100450-mRNA-1:exon:2661;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6917851 | 6917902 | 6917851 | ID=Msa0100450-mRNA-1:exon:2660;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6918021 | 6918224 | 6918021 | ID=Msa0100450-mRNA-1:exon:2659;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6918777 | 6918848 | 6918777 | ID=Msa0100450-mRNA-1:exon:2658;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6918958 | 6919093 | 6918958 | ID=Msa0100450-mRNA-1:exon:2657;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6919139 | 6919256 | 6919139 | ID=Msa0100450-mRNA-1:exon:2656;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6919323 | 6919427 | 6919323 | ID=Msa0100450-mRNA-1:exon:2655;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6919475 | 6919625 | 6919475 | ID=Msa0100450-mRNA-1:exon:2654;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6919758 | 6919820 | 6919758 | ID=Msa0100450-mRNA-1:exon:2653;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6919920 | 6920089 | 6919920 | ID=Msa0100450-mRNA-1:exon:2652;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6921239 | 6921311 | 6921239 | ID=Msa0100450-mRNA-1:exon:2651;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6922860 | 6923005 | 6922860 | ID=Msa0100450-mRNA-1:exon:2650;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6923630 | 6923810 | 6923630 | ID=Msa0100450-mRNA-1:exon:2649;Parent=Msa0100450-mRNA-1 |
| chr1_3 | exon | 6924548 | 6924879 | 6924548 | ID=Msa0100450-mRNA-1:exon:2648;Parent=Msa0100450-mRNA-1 |
| chr1_3 | five_prime_UTR | 6924638 | 6924879 | 6924638 | ID=Msa0100450-mRNA-1:five_prime_utr;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6924548 | 6924637 | 6924548 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6923630 | 6923810 | 6923630 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6922860 | 6923005 | 6922860 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6921239 | 6921311 | 6921239 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6919920 | 6920089 | 6919920 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6919758 | 6919820 | 6919758 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6919475 | 6919625 | 6919475 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6919323 | 6919427 | 6919323 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6919139 | 6919256 | 6919139 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6918958 | 6919093 | 6918958 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6918777 | 6918848 | 6918777 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6918021 | 6918224 | 6918021 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6917851 | 6917902 | 6917851 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6917737 | 6917742 | 6917737 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | CDS | 6917366 | 6917586 | 6917366 | ID=Msa0100450-mRNA-1:cds;Parent=Msa0100450-mRNA-1 |
| chr1_3 | three_prime_UTR | 6916778 | 6917365 | 6916778 | ID=Msa0100450-mRNA-1:three_prime_utr;Parent=Msa0100450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
